NO06G00430, NO06G00430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_108663820.1 (hypothetical protein [Acuticoccus sp. J103]) HSP 1 Score: 130.6 bits (327), Expect = 1.400e-26 Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 0 Query: 309 PFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDVSPK-----VDVAFTGWCQGAQDF---VSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYMKSGFGD--IDRTYAQAAARLREYLDKVTI 499 PF EK + +WRG TTG + + + + +A I DVSP +D+ ++ + D S + PFLK + +QLQ +YL+ +EGNDVAT LKWMLASNSVV MP P E W+ E L P+ H++PV+AD SDL E C E C ++E +M F D +++ + A Y +KVT+ Sbjct: 151 PFGEKEDRLVWRGSTTGNFKMNSPLQPPSS--RAFIP----DVSPNLKTLDIDIGYSALTENISDSNLKTSEFEPFLKDRMSMRDQLQAKYLLCLEGNDVATSLKWMLASNSVVIMPHPTVESWACESFLRPFTHYVPVKADLSDLEEVFEWCREHHEHCRRIAESGKAFM-DAFSDRAVEKKLQRRVA--TGYAEKVTL 341
BLAST of NO06G00430 vs. NCBI_GenBank
Match: ORE94481.1 (lipopolysaccharide protein [Stappia sp. 22II-S9-Z10]) HSP 1 Score: 112.1 bits (279), Expect = 5.100e-21 Identity = 66/195 (33.85%), Postives = 98/195 (50.26%), Query Frame = 0 Query: 309 PFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDV-SPKVDVAFTGWCQ----GAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYMKSGFGDIDRTYAQAAARLREYLDKVTI 499 PF EKA +WRG TTG + W H R + W +P D F+ Q G +D +KP+L EQL +YL+ +EGND+A+G+KW+LASNS++ MP E W+ E +L P VH++ V+ D DL CE +C ++E ++M S F D A +++Y +V + Sbjct: 153 PFEEKASVVVWRGATTGVF-W----HPPFGSRYYIYQHWDRFARNPAFDFGFSRIVQVDKVGLKDDFGPLERCIKPTLSYKEQLAAKYLLVLEGNDLASGMKWILASNSLIIMPRIHAESWACESMLRPGVHYVEVRRDLEDLEDVYAWCEAHPAQCREIAENGKRFM-SAFMDAGVERDLVDAVVKQYQKRVRL 341
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_083549496.1 (hypothetical protein [Stappia sp. 22II-S9-Z10]) HSP 1 Score: 112.1 bits (279), Expect = 5.100e-21 Identity = 66/195 (33.85%), Postives = 98/195 (50.26%), Query Frame = 0 Query: 309 PFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDV-SPKVDVAFTGWCQ----GAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYMKSGFGDIDRTYAQAAARLREYLDKVTI 499 PF EKA +WRG TTG + W H R + W +P D F+ Q G +D +KP+L EQL +YL+ +EGND+A+G+KW+LASNS++ MP E W+ E +L P VH++ V+ D DL CE +C ++E ++M S F D A +++Y +V + Sbjct: 156 PFEEKASVVVWRGATTGVF-W----HPPFGSRYYIYQHWDRFARNPAFDFGFSRIVQVDKVGLKDDFGPLERCIKPTLSYKEQLAAKYLLVLEGNDLASGMKWILASNSLIIMPRIHAESWACESMLRPGVHYVEVRRDLEDLEDVYAWCEAHPAQCREIAENGKRFM-SAFMDAGVERDLVDAVVKQYQKRVRL 344
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_075219815.1 (hypothetical protein [Acuticoccus yangtzensis]) HSP 1 Score: 111.7 bits (278), Expect = 6.700e-21 Identity = 66/195 (33.85%), Postives = 98/195 (50.26%), Query Frame = 0 Query: 309 PFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDV-SPKVDVAFTGWCQ----GAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYMKSGFGDIDRTYAQAAARLREYLDKVTI 499 PF EKA +WRG TTG + W H R + W +P D F+ Q G +D +KP+L EQL +YL+ +EGND+A+G+KW+LASNS++ MP E W+ E +L P VH++ V+ D DL CE +C ++E ++M S F D A +++Y +V + Sbjct: 156 PFEEKASVVVWRGATTGVF-W----HPPFGSRYYIYQHWDRFAQNPGFDFGFSRIVQVDKVGLKDDFGPLERCIKPTLSYKEQLAAKYLLVLEGNDLASGMKWILASNSLIIMPRIHAESWACESMLRPGVHYVEVRRDLEDLEDVYAWCEAHPAQCREIAENGKRFM-SAFMDAGVERDLVDAVVKQYQKRVRL 344
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_008597415.1 (LPS biosynthesis protein [Nitratireductor pacificus] >EKF18550.1 lipopolysaccharide core biosynthesis protein lpsA [Nitratireductor pacificus pht-3B]) HSP 1 Score: 109.4 bits (272), Expect = 3.300e-20 Identity = 65/186 (34.95%), Postives = 95/186 (51.08%), Query Frame = 0 Query: 309 PFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDVSPKVDVAFTGWCQGAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYMKSGFGDIDRTYAQAAARLREYLD 495 PF +KAP+A+WRGV R+ L++ +GG + + TG V +P + S+PQ QL RY+IS+EGNDVAT LKW++ SNS+ MP PR E W EG L+P H+ ++AD SDL + ER E + A ++ + F D R + L++Y + Sbjct: 146 PFEQKAPRAVWRGVL------------NTEARRRLVELYGGHTAFDIGHVQTG--------VEGVAPKARLSIPQ--QLASRYIISLEGNDVATNLKWIMTSNSLCLMPRPRYETWFMEGALVPGRHYAELRADLSDLEETVAHYERHPEEARRIISEAHAHV-ARFADTRREALLSFLVLQKYFE 308
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_077530194.1 (hypothetical protein [Halomonas utahensis]) HSP 1 Score: 109.0 bits (271), Expect = 4.300e-20 Identity = 69/187 (36.90%), Postives = 92/187 (49.20%), Query Frame = 0 Query: 310 FREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDVSPKVDVAFTGWCQGAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYMKSGFGDIDRTYAQAAARLREYLDKV 497 FR+K P AIWRG RKA ++ + SP DV G S P+ +P +EQL YRY++S+EGNDVAT LKW+LASNS+ M PR E W EG L P VH+ + D SDL +I E EA+ A ++ + F D R + + +R Y +KV Sbjct: 156 FRDKEPVAIWRG------------KGSQPQRKAFLERYHD--SPLCDV-------GCNHEESIGKPWHTGFMPASEQLNYRYIVSIEGNDVATNLKWILASNSLCLMRRPRYETWFMEGALEPDVHYACLADDHSDLEEQIRYYSAHPEAAEAIIRNAQAHV-ARFMDTRREWLISLLVMRRYFEKV 320
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_013795303.1 (LPS A protein [Marinomonas posidonica] >AEF53826.1 lipopolysaccharide-modifying protein [Marinomonas posidonica IVIA-Po-181]) HSP 1 Score: 107.1 bits (266), Expect = 1.600e-19 Identity = 59/164 (35.98%), Postives = 88/164 (53.66%), Query Frame = 0 Query: 309 PFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDVSPKVDVAFTGWCQGAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYMK 473 PF +K PQA+WRG ++H + HRK +D + G VS + G D + K L +QL+Y+Y++S+EG DVAT LKW + SNS+V M PR E W EGLL P H++ ++ DFSDL +I+ + + + + A +Y+K Sbjct: 145 PFEDKKPQAVWRG----------MVHHQ--HRKDFVDLYYGCVSANI---------GHND---HTKEGFKGFLSIKDQLRYKYIVSIEGKDVATNLKWAMNSNSLVMMRKPRFETWFMEGLLKPDFHYVKLKDDFSDLKEKIDYYNENPNEAKDIIKNAKQYVK 284
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_018427817.1 (hypothetical protein [Hoeflea sp. 108]) HSP 1 Score: 105.5 bits (262), Expect = 4.800e-19 Identity = 63/163 (38.65%), Postives = 87/163 (53.37%), Query Frame = 0 Query: 310 FREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDVSPKVDVAFTGWCQGAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYMK 473 F +K P+A+WRG GG+ + R AL+D G P DV G G D P K L EQ+ YRYL+S+EG DVAT LKW++ASNS+ MP P E W EGLL P VH++ ++ DF+DL +I ER + + A+ +++ Sbjct: 146 FEDKIPKAVWRG---GGH---------NPKRIALVD--GFHSHPLCDV---GRTSGTND-----DPGRKGFLTPVEQMSYRYLLSIEGVDVATNLKWVMASNSLCMMPKPTFETWFMEGLLQPGVHYVQLRDDFADLEDKIVHYERHQDEAREIIRNANAHVR 286
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_012030835.1 (O-glucosyltransferase LpsA [Dichelobacter nodosus] >P39907.1 RecName: Full=O-glucosyltransferase LpsA >AAC43386.1 LpsA [Dichelobacter nodosus] >ABQ13803.1 hypothetical protein DNO_0500 [Dichelobacter nodosus VCS1703A] >KNZ39401.1 lipopolysaccharide A protein [Dichelobacter nodosus]) HSP 1 Score: 105.5 bits (262), Expect = 4.800e-19 Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 0 Query: 309 PFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDVSPKVDVAFTGWCQGAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYM 472 PFR K Q +WRG NHR ++ + P DV C A+ S P+ + + QLQYRY++S+EGNDVAT LKW++ASNS+ MP PR E W EG L VH++ ++ DF+DL +I ER E EA+ + A ++M Sbjct: 150 PFRAKKSQLVWRGAA------------HQNHRIRFLEHF--HQHPLCDVG----CIHAR---SAAKPYHREFMSVKRQLQYRYILSLEGNDVATNLKWIMASNSLCLMPAPRYETWMMEGRLQAGVHYVQLRDDFADLEEQILFFERYPEAAEAIIKNAQQWM 291
BLAST of NO06G00430 vs. NCBI_GenBank
Match: WP_018183543.1 (hypothetical protein [Kaistia granuli]) HSP 1 Score: 103.6 bits (257), Expect = 1.800e-18 Identity = 59/163 (36.20%), Postives = 88/163 (53.99%), Query Frame = 0 Query: 309 PFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGDVSPKVDVAFTGWCQGAQDFVSYWSPFLKPSLPQAEQLQYRYLISVEGNDVATGLKWMLASNSVVFMPMPRREIWSREGLLMPWVHFIPVQADFSDLLLRIEECERDLERCEAVSERASKYM 472 PF EK A+WRG+ ++ R+ L++ + P D+ T GA +Y L QLQ+RY++S+EGNDVAT LKW++AS S+ MP PR E W EG L+P VH+ V++DF+DL I ER+ + A+ E A++++ Sbjct: 144 PFHEKRRSAVWRGIL-----------GRNPVRRVLVEKFWR--HPAHDIGHTCDMGGAIAPKAY--------LGIGAQLQHRYILSIEGNDVATNLKWIMASQSLCIMPRPRYETWFMEGQLVPGVHYAEVRSDFADLEETIAHYERNEDEARAIIENANRHV 285 The following BLAST results are available for this feature:
BLAST of NO06G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00430 ID=NO06G00430|Name=NO06G00430|organism=Nannochloropsis oceanica|type=gene|length=2293bpback to top protein sequence of NO06G00430.1 >NO06G00430.1-protein ID=NO06G00430.1-protein|Name=NO06G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bpback to top protein sequence of NO06G00430.2 >NO06G00430.2-protein ID=NO06G00430.2-protein|Name=NO06G00430.2|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
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