NO06G00160, NO06G00160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G00160 vs. NCBI_GenBank
Match: XP_005855803.1 (peptidoglycan-binding lysin domain containing protein [Nannochloropsis gaditana CCMP526] >EKU20558.1 peptidoglycan-binding lysin domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 627.1 bits (1616), Expect = 5.000e-176 Identity = 303/455 (66.59%), Postives = 355/455 (78.02%), Query Frame = 0 Query: 72 MLRTVTIPATFA-LVAVVAAWIAPGACAANRCVQTCLMPYGTNTTASIKASCRDACKLTAPIRRQCLKLEKSLWREPTKTCRRSLRNIKRGLAPLTLNVTLTTPINATTSIPTTYTYTFDSECAKEIRREQKFERKTCRELMCPLNEYWTFEAQGCHVHN-SGVAVAATKSPPLPALLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAINLLSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWEGFNSAWVSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVWSNTPPPKPGPGPTCVSGYFPGSGCAYMCSWCAQQLQTNNYYWTTGVCTYQDPVGCVGSPMAGVEYTCCR 525 M ++TI A LV+ +A+ AP A N C++TCL+PYGTN T +IK CR ACK+ AP+R C K + WR TK CR+S+R IK+GL PLT V+ TTP NA++ IPT YT+++ C KEI+ E K ++TCRE++CP +YW EA C V+ ++V T PA LRGFYK SW G+ YQGP DTN+GVTFTGRLPGDP+ANIAPMT +AINLLSYGGGNEFGAWS+A +AV SNL+ VI+L YDGIVIDAE YA+GQ+VTV EWNTMFAAIKA+NL+LIVT SHFSPYGM N AL+ DWLSNP IDYLSPQLYTSGTE +NDW GF++AW +ASTPIAPSIVQ SYYDQLG NSVT YLPNAKGYLVWSNTPPP+PGP P+CVSGYFPGSGCAYMC WCAQQLQT+NYYW +GVCTYQ GCVGSP AGVEYTCC+ Sbjct: 1 MRASITIAGFLAVLVSTASAYRAPQ--ARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFPGSGCAYMCEWCAQQLQTDNYYWKSGVCTYQAGTGCVGSPQAGVEYTCCK 453
BLAST of NO06G00160 vs. NCBI_GenBank
Match: EWM26062.1 (hypothetical protein Naga_100850g2 [Nannochloropsis gaditana]) HSP 1 Score: 530.8 bits (1366), Expect = 4.800e-147 Identity = 263/406 (64.78%), Postives = 312/406 (76.85%), Query Frame = 0 Query: 72 MLRTVTIPATFA-LVAVVAAWIAPGACAANRCVQTCLMPYGTNTTASIKASCRDACKLTAPIRRQCLKLEKSLWREPTKTCRRSLRNIKRGLAPLTLNVTLTTPINATTSIPTTYTYTFDSECAKEIRREQKFERKTCRELMCPLNEYWTFEAQGCHVHN-SGVAVAATKSPPLPALLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAINLLSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWEGFNSAWVSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVWSNTPPPKPGPGPTCVSGYFP 476 M ++TI A LV+ +A+ AP A N C++TCL+PYGTN T +IK CR ACK+ AP+R C K + WR TK CR+S+R IK+GL PLT V+ TTP NA++ IPT YT+++ C KEI+ E K ++TCRE++CP +YW EA C V+ ++V T PA LRGFYK SW G+ YQGP DTN+GVTFTGRLPGDP+ANIAPMT +AINLLSYGGGNEFGAWS+A +AV SNL+ VI+L YDGIVIDAE YA+GQ+VTV EWNTMFAAIKA+NL+LIVT SHFSPYGM N AL+ DWLSNP IDYLSPQLYTSGTE +NDW GF++AW +ASTPIAPSIVQ SYYDQLG NSVT YLPNAKGYLVWSNTPPP+PGP P+CVSGYFP Sbjct: 1 MRASITIAGFLAVLVSTASAYRAPQ--ARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFP 404
BLAST of NO06G00160 vs. NCBI_GenBank
Match: AQR65134.1 (hypothetical protein BXU06_08725 [Aquaspirillum sp. LM1]) HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19 Identity = 69/196 (35.20%), Postives = 102/196 (52.04%), Query Frame = 0 Query: 245 ALLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAI---NLLSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWEGFN---SAWVSASTPIAPSIVQKSYY 435 A + G++ +SW S P N+G+ F+G + D + + N + + GGGN GAWS AV + ++A Y GI D E G A++ FAA KA+ + ++VT+SH PYG+ +A +L+ + +N ID LSPQLYT+G ET ND+ N SA+ A I PSIV+ + Y Sbjct: 127 ASVLGYWCWSWDAGS---APAGANLGIAFSGWVSPDEALSNSLAVVNQLQGKKFICLGGGNSSGAWSNDAVNAVTQA--IEANRFAGYHGIAYDIE---EGSAGLEAQFAASFAAAKAKGMTVLVTVSHSCPYGITDAVSLMNSFFANRDIDLLSPQLYTTGQETSNDYTALNVPWSAYAQAQAAIVPSIVRANLY 314
BLAST of NO06G00160 vs. NCBI_GenBank
Match: WP_089131575.1 (hypothetical protein [Tolypothrix sp. NIES-4075] >GAX46227.1 hypothetical protein NIES4075_72480 [Tolypothrix sp. NIES-4075]) HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19 Identity = 67/219 (30.59%), Postives = 115/219 (52.51%), Query Frame = 0 Query: 246 LLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAI---NLLSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWEGFNSA----WVSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVWSN 458 L++G++ +++ S + +G+ F+G D + + KN + +S GGGN G+++ + ++ +++ +Y GI D E G+ + + F A K +NL ++VT SH +PYG+P+A ++ ++ N IDYLSPQLYTSGTETEND++ + + I PSIVQ + Y N + + N KG++ W+N Sbjct: 12 LIKGYWDKTYSPSHPFD---HATLGIAFSGWANPDKALSDSAEIKNRLVGHKYISLGGGNNNGSFTQEILHSII--THIKNGKFSDYRGIAFDIE---EGEANLTSHFEHAFTAAKNKNLKVLVTTSHSAPYGIPDAQMMMKNFFRNENIDYLSPQLYTSGTETENDFQTSQGVSWEDYAHSKPAIVPSIVQANMYHD-AKNRFSRHQVNTKGFIQWAN 221
BLAST of NO06G00160 vs. NCBI_GenBank
Match: WP_096680107.1 (hypothetical protein [Fischerella sp. NIES-4106] >BAZ71107.1 hypothetical protein NIES4106_59040 (plasmid) [Fischerella sp. NIES-4106]) HSP 1 Score: 105.5 bits (262), Expect = 5.000e-19 Identity = 68/219 (31.05%), Postives = 120/219 (54.79%), Query Frame = 0 Query: 246 LLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAI---NLLSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDW---EGFNSAWVSASTP-IAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVWSN 458 L++G++ +++ S + + +G+ F+G D + + KN + +S GGGN G+++ + ++ +++ +Y GI D E G+ +++ FAA K +N ++VT SH +PYG+P+A ++ +++ N IDYLSPQLYTSGTETEND+ +G + + S P I PSIV+ + Y N + + KG++ W+N Sbjct: 13 LIKGYWNKTYSPSHPF---NHSTLGIAFSGWAKPDKALSDSAEIKNRLVGHKYISLGGGNSNGSFTQQILHSII--THIKNGKFSDYRGIAFDIE---EGEANLTSDFEHAFAAAKNKNFKVLVTTSHSAPYGIPDARTMMKNFIKNENIDYLSPQLYTSGTETENDFATSQGVSWEDYAHSKPVIVPSIVRANMYRD-AKNRFSRHGVTTKGFIQWAN 222
BLAST of NO06G00160 vs. NCBI_GenBank
Match: WP_083943443.1 (LysM peptidoglycan-binding domain-containing protein [Rhizobium taibaishanense] >OLP47601.1 hypothetical protein BJF91_04165 [Rhizobium taibaishanense]) HSP 1 Score: 103.2 bits (256), Expect = 2.500e-18 Identity = 71/227 (31.28%), Postives = 112/227 (49.34%), Query Frame = 0 Query: 238 TKSPPLPALLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAINL-----LSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWEGFN----SAWVSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVW 456 T S PA G++ +W P + MG+ F+G DP +A NL ++ GGGN+ G++S+ + ++ + A + GI D E ++G + A + F+ KA +L ++VT+SH +P+G+ +A L+ + S+ ID+LSPQLYTSG+ET NDW A+ A I PSI + YD + + A GY+VW Sbjct: 125 TTSSTTPAENIGYWDKTW---HRVAAPANATMGLAFSGY--SDPSKALAQSATVIANLAGVKYITLGGGNQDGSFSVPILDSINSAIRHGAF--SHCQGIAYDVEEGSSGLS---AAFRNSFSIAKAASLSVLVTVSHSTPFGVADAKTLMASFFSDANIDFLSPQLYTSGSETSNDWATSGGVTWDAYKDAKAAIVPSITHANLYDNAQATFAHHQVKTA-GYIVW 340
BLAST of NO06G00160 vs. NCBI_GenBank
Match: WP_094344768.1 (hypothetical protein [Nostoc sp. 'Peltigera membranacea cyanobiont' 232] >OYE02026.1 hypothetical protein CDG79_26305 [Nostoc sp. 'Peltigera membranacea cyanobiont' 232]) HSP 1 Score: 102.8 bits (255), Expect = 3.300e-18 Identity = 66/223 (29.60%), Postives = 116/223 (52.02%), Query Frame = 0 Query: 246 LLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAI---NLLSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETEND--------WEGFNSAWVSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVWSN 458 L++G++ +++ S + + +G+ F+G D + + KN + +S GGGN G+++ + ++ +++ +Y I D E G+ ++++ FAA K +NL ++VT SH +PYG+ +A+ ++ ++ N IDYLSPQLYTSGTETEND WE + + I PSIVQ + Y N + + G++ W+N Sbjct: 12 LIKGYWDKTYSPSHPF---NHSTLGIAFSGWAKPDQALSDSAEIKNRLVGHKYISLGGGNSNGSFTQEILHSII--THIKNGKFSDYKAIAFDIE---EGEANLISDFQQAFAAAKNKNLKVLVTTSHSAPYGITDAHTMMKTFIKNENIDYLSPQLYTSGTETENDFATSQGVSWEDY----AHSKAAIVPSIVQANMYHD-AKNRFSRHGVTTSGFIQWAN 221
BLAST of NO06G00160 vs. NCBI_GenBank
Match: WP_013661845.1 (LysM peptidoglycan-binding domain-containing protein [Marinomonas mediterranea] >ADZ91942.1 Peptidoglycan-binding lysin domain [Marinomonas mediterranea MMB-1]) HSP 1 Score: 99.4 bits (246), Expect = 3.600e-17 Identity = 66/221 (29.86%), Postives = 113/221 (51.13%), Query Frame = 0 Query: 245 ALLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAI---NLLSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWE---GFNSAW---VSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVWS 457 A+ G++ ++W+G+S+ P + + + F+G + K ++ L++GGGN+ G ++ Q + +S + + Y+G+ D E G + ++ F A K L ++VT+SH +PYG+ +A+AL+ + ++ ID LSPQLYT G ETEND++ G ++ W SA I PSIV YD + T GY+ W+ Sbjct: 127 AINMGYWNWTWSGTSN---PSNATLSLAFSGWTDPTTALQDSHQVKPSLVGTKYLTFGGGNDNGKFTALSLQDI--TSAIQSGKLEGYEGVAYDVE---EGDSHLENDFAVSFKAAKDAGLKVLVTVSHSAPYGITDADALMQSFFADSNIDLLSPQLYTEGDETENDYQTTSGTSTTWEDYASAKAAIVPSIVTSDLYDS-ATGYFTEQGVTLAGYIQWA 338
BLAST of NO06G00160 vs. NCBI_GenBank
Match: OBQ05553.1 (hypothetical protein AN482_16220 [Anabaena sp. LE011-02]) HSP 1 Score: 99.4 bits (246), Expect = 3.600e-17 Identity = 71/223 (31.84%), Postives = 115/223 (51.57%), Query Frame = 0 Query: 248 RGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAINLL------SYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWEG----FNSAWVSASTPIAPSIVQKSYY----DQLGSNSVTTYLPNAKGYLVWS 457 RG+++ +W S D D N+G+ F+G + N + N I L S GGGN G ++ ++ QA+ ++ + + Y GI D E G + + FAA +A N ++VT+SH +PYG+ +A L++ + ++ I++LSPQLYT+GTETEN++E S + A + PS+V Y + L + VTT+ GY+ WS Sbjct: 5 RGYWRRTWEQSGDL---PDANIGIAFSGWAAWE---NALQGSANVIGSLRGDKYISLGGGNANGRFTSSLLQAI--TTAIQSGQFAEYQGIAYDVE---EGDSGLEQVFRDSFAAARAANFKVLVTVSHSAPYGITDALQLMMSFFNDQNINFLSPQLYTNGTETENNYETTAGVLWSHYTQAQALVIPSVVTADLYSSGREYLANQGVTTH-----GYIQWS 211
BLAST of NO06G00160 vs. NCBI_GenBank
Match: WP_064967744.1 (hypothetical protein [Tenacibaculum ovolyticum]) HSP 1 Score: 97.4 bits (241), Expect = 1.400e-16 Identity = 68/213 (31.92%), Postives = 104/213 (48.83%), Query Frame = 0 Query: 253 FSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAIN---LLSYGGGNEFGAWSLAVTQAVADSSNLDAVIA--LNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWEGFNSA----WVSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVWS 457 ++WT +D Q P+ T + + F+G N + K+ ++ +S GGGNE GA+ TQ + +S L YDGI D E G++ + F A K + L ++VT+SH +PYG+ +A L+ + N ID +SPQLYT+G E END++ + + I PSIV+ S Y L +GY+ WS Sbjct: 11 WNWTWETDNQSPEGTTLSIAFSGYSNAQEAINNSLSKKDKLSGEKYISVGGGNEAGAF----TQNILESLTLSIQNGDFEGYDGIAYDVE---EGESGLENYFAASFQAAKNKGLKVLVTVSHSAPYGISDARELMYSFFLNENIDIISPQLYTTGQELENDYDTSQGVLWNDYENCKAAIVPSIVKASMYINAQEYFARLGL-TLQGYIQWS 215 The following BLAST results are available for this feature:
BLAST of NO06G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00160 ID=NO06G00160|Name=NO06G00160|organism=Nannochloropsis oceanica|type=gene|length=4109bpback to top protein sequence of NO06G00160.1 >NO06G00160.1-protein ID=NO06G00160.1-protein|Name=NO06G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bpback to top Synonyms
Publications
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