NO06G00160.1, NO06G00160.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G00160.1
Unique Name	NO06G00160.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3858
Alignment location	chr6:69351..73459 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:69351..73459 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO06G00160.1 vs.
Match: XP_005855803.1 (peptidoglycan-binding lysin domain containing protein [Nannochloropsis gaditana CCMP526]; EKU20558.1 peptidoglycan-binding lysin domain containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 627.1 bits (1616), Expect = 5.000e-176
Identity = 303/455 (66.59%), Postives = 355/455 (78.02%), Query Frame = 0

Query:   72 MLRTVTIPATFA-LVAVVAAWIAPGACAANRCVQTCLMPYGTNTTASIKASCRDACKLTAPIRRQCLKLEKSLWREPTKTCRRSLRNIKRGLAPLTLNVTLTTPINATTSIPTTYTYTFDSECAKEIRREQKFERKTCRELMCPLNEYWTFEAQGCHVHNS-GVAVAATKSPPLPALLRGFYKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAINLLSYGGGNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEWNTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLYTSGTETENDWEGFNSAWVSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAKGYLVWSNTPPPKPGPGPTCVSGYFPGSGCAYMCSWCAQQLQTNNYYWTTGVCTYQDPVGCVGSPMAGVEYTCCR 525
            M  ++TI    A LV+  +A+ AP A   N C++TCL+PYGTN T +IK  CR ACK+ AP+R  C K   + WR  TK CR+S+R IK+GL PLT  V+ TTP NA++ IPT   YT+++ C KEI+ E K  ++TCRE++CP  +YW  EA  C V+    ++V  T     PA LRGFYK SW G+  YQGP DTN+GVTFTGRLPGDP+ANIAPMT +AINLLSYGGGNEFGAWS+A  +AV   SNL+ VI+L YDGIVIDAE YA+GQ+VTV EWNTMFAAIKA+NL+LIVT SHFSPYGM N  AL+ DWLSNP IDYLSPQLYTSGTE +NDW GF++AW +ASTPIAPSIVQ SYYDQLG NSVT YLPNAKGYLVWSNTPPP+PGP P+CVSGYFPGSGCAYMC WCAQQLQT+NYYW +GVCTYQ   GCVGSP AGVEYTCC+
Sbjct:    1 MRASITIAGFLAVLVSTASAYRAPQA--RNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFPGSGCAYMCEWCAQQLQTDNYYWKSGVCTYQAGTGCVGSPQAGVEYTCCK 453

The following BLAST results are available for this feature:

BLAST of NO06G00160.1 vs.

BLAST of NO06G00160.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005855803.1	5.000e-176	66.59	peptidoglycan-binding lysin domain containing prot...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G00160	NO06G00160	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO06G00160.1	NO06G00160.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO06G00160.1.cds1	NO06G00160.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00160.1.cds2	NO06G00160.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6:69351..73459+
coding sequence from alignment at chr6:69351..73459+

mRNA sequence

>NO06G00160.1 ID=NO06G00160.1|Name=NO06G00160.1|organism=Nannochloropsis oceanica|type=mRNA|length=3858bp
CTGAATTGGAAAGCGGATATAGAATTGAGGCGTGATTGACATTTCTTTGC
TTTCCCCAGCACCACTCCCTGTCACCCCTCTCTGTCTGCCTCCATCAAAA
CGGAGTCCCAAGCGCGAATCAGTATCCATTCAATCCCTCTATCCCTTTCC
TCCTTCTTTAAACTCTCTATTTTTCGTTTCTTCTATCCTTCTTCCCCGAA
AATTCGGGACACATTTACCACGATGAGATGGCCAGCTATAAGACATCCCT
TCGAGGAATGGAAGGAGAGACAACAGAAGGGCACAAAGCTACAAAGGTCC
CCAAAAAAGAAAGGCAGCGAGACCAGATGAAAGTATGAAAGTTTGAACCG
CGGCAAGTTGGATGGCAAGAAGGAGACGTTGGGTAAGGTCACGAGAGAGG
AAGGAGAGAATAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGGAGAAGT
CAAAGGCCTTCCCCAAATGAACGCAAGTGAAAGAATTTCTGGTGATATAG
AATGAGCTATAGATAGAGGGAAAGAGTATGGAGTGGAACGGTCATTCCTC
TTCCCCATGGAGTGCTTGAGATTTAACCTAGCCAACGTATGAGAGAGTGT
CGTAGAAGCAGCTGAGGTGGTAGGAAGGGGGAAGGGAGCAAGAGGGTGTA
CCCCATTCCACCGCCGTATGCACGTTTATATGGTTTCACCTAATACTCCT
CCCTCAAATAAAGGAAGACGAGGAGGACGGGGATGGCCAATCATAAATAC
ATACATAAGAGTTAGGGCAAGTCTTTATTTTTACACCAAAGCTAGCGTGG
GCGATGGTGGGGATGATGACATGGATGACGCGCCATTCACTATCGATATA
CCTAAAATTTGGGTAGCGGGCGATGTGTCGTGTGTGGAGACGGACTATAC
AGAAAGTTATGTATTTTTTTTTTGCTCTTTTTATTTTTTTGGGGTTAAAA
TTACCATTACCTGCTTTACCCCCGACATGTTGGCATCTACTTCTATCATA
CTGTGAGCAGCAAAATAAGCCCGCCCCACGTGACGGGGTAGCTGCCGGCA
TCAGGCCACCAGCGTTTTCGCGGGATGATGACGCCATCCCACTCTGAACA
AGCCGCTCCTTTGGCTGCTTGTGCTTGGAGAATGCCGAGCTTGGTTGAGA
CAAGAAGTCGACGGAGAAAGGCGAAGTTCTATATGCCATCTCTTCTGCCT
GGTGTTGGTCAGAGACAATTTCTGATTGAGGGGTCGAAACGCTCAGGAAG
AGGGCTTCCTTTGAATATGTCCGAGGTGTTCCGTTTGCCACCACTTTGTC
GCACGCGTGTATGATAAATAGGTCGCCTTCTCCTAAAGGTTGGAAGCTAT
GGCCCTGAAGAGGCTGACCACGAACTTTGACGGCACGTGACGAAATATTA
TAGAGGCAAAACATGGATGGGAAGAAAACATCTTTTGTAAATGCACAACG
AAAAACGAAAAATAAGCAGACTATTGAGGATGAGGACTTGATGACTGACT
CTGTTTTTTTGCTGTTTTTTGGGGGTTTGGTGGTCTATTCACAAATAAAG
CACTCGATGACTGACCCATTTTTGTAGTTGTTTTGTGGGGGTTTTGGGGT
TCATTCACAATAAACCACGTTTTTTATTTTTTGGGGGACAAATTCATAGA
AACGCCCGAGCGTTTCGACCCAACGCCCTTTCGCCTGGTGACGATGGCAG
TACTGGGGATGTTCTGCAGCTGATACTGCTGGCACAATGTACAATATAAT
TGCTTAGTGCGGGTTGTGAGGCAACTGTGGTTTGGGGGGGGATAGCCATA
TGTTAAGCCGCAAAGAAACTTTCGTGTGATCGTTACGGGCCATAAGAATT
GTACAGGTATGGCTTAGGGGGAGTCGAAACGCTCGGGAACAGCGTTCCCG
TGATATGTCCCAAGCGTTCAATATAAAACGTATTTACACATAGCACGGAT
GGAGTCCAATTCGAGGTCTTCAAGCTTCACCTGTCCTGCATTTAGTCAAA
ATGCAGCATACATGGCCACATACAATGGCAGCATGAAGCTCGATCATGAA
CGTATCTTCATGACCACCCATAGAAGACTACGTCGAGACACCCGTACGGC
CCACTGGCTCCTAAACCTCATATCCACCCTCTCATCCCTCGCCACAGAAG
TTTGCAGTCATATGCTACGCACTGTGACCATCCCCGCCACCTTTGCCCTC
GTGGCTGTCGTGGCAGCCTGGATAGCCCCTGGAGCATGTGCTGCCAATCG
CTGTGTTCAGACCTGTCTGATGCCCTATGGAACCAATACAACGGCGTCCA
TTAAGGCCAGCTGCCGCGATGCATGCAAGCTCACCGCCCCCATACGTCGC
CAATGCCTCAAACTGGAAAAATCTCTCTGGCGCGAGCCGACCAAGACCTG
CCGCAGGAGCCTGCGGAATATCAAGCGGGGCCTCGCACCACTGACCCTTA
ATGTTACGCTCACGACGCCAATCAACGCGACGACGAGTATTCCTACCACT
TACACATACACGTTTGATTCAGAGTGCGCCAAGGAGATCAGACGAGAGCA
AAAATTTGAAAGAAAGACCTGCCGTGAGCTTATGTGCCCTTTGAATGAAT
ACTGGACTTTTGAGGCGCAAGGATGCCATGTTCATAACTCTGGTGTAGCG
GTAGCTGCTACGAAAAGCCCTCCCCTTCCAGCGCTTTTGCGGGGTTTCTA
CAAATTTTCCTGGACAGGCTCCTCGGACTACCAGGGACCCAAGGATACCA
ATATGGGCGTGACTTTTACTGGCCGACTGCCCGGAGATCCCGAAGCAAAT
ATTGCTCCGATGACCAAGAATGCCATAAATTTGCTCTCTTATGGTGGTGG
CAACGAGTTCGGGGCCTGGTCATTAGCAGTCACACAGGCTGTGGCAGACT
CGAGCAATTTGGATGCTGTAATTGCCCTGAATTACGATGGCATTGTGATT
GACGCAGAAGTCTACGCAACAGGCCAAACAGTGACGGTAGCGGAGTGGAA
CACCATGTTTGCGGCGATCAAAGCGCGAAACTTATTGCTCATTGTGACCA
TCTCTCACTTCTCTCCGTACGGAATGCCCAATGCTAACGCGCTTGTGGTC
GATTGGCTGTCGAACCCACTTATCGATTACCTTTCCCCTCAATTGTACAC
CTCTGGGACCGAAACCGAGAACGATTGGGAGGGTTTTAACAGCGCTTGGG
TATCTGCTTCCACACCGATTGCCCCATCCATTGTTCAGAAATCATACTAC
GACCAGCTGGGTTCCAATTCGGTCACTACATACCTGCCCAACGCCAAGGG
CTACCTGGTGTGGAGTAACACACCGCCGCCAAAGCCGGGACCAGGCCCCA
CCTGCGTGAGTGGATACTTTCCGGGAAGCGGCTGTGCCTACATGTGCTCT
TGGTGCGCACAGCAACTTCAGACGAACAATTATTACTGGACGACGGGCGT
CTGCACGTACCAGGACCCCGTCGGCTGTGTGGGCAGTCCCATGGCCGGCG
TGGAGTACACGTGCTGTCGCATTGAGTAAACGACGAGCAGGGTAGAATCG
GCGCGAGCAAGCGGGTATATGTGGTATACATACAAATGAGGGGGGACATG
AGACAAAAAGATGTGACAGAATCTGGGCTACCCCCCCTTGTGTTGGGTGT
ATACGCAGCTGCTCTTTTGTGCGTATGGTAGAACAATTTTGCTCTGATGA
ACGGAAAGCTGGATGAAAGCATCAATAGAAAAAGTATGCGAAAAATAAGA
AGGGTGATTAGAATGCCGGGTAGGATGCGGTGACTATTTACAATCACCAG
AAAAAGCATAGGATTCAAAAGCGTAGCGCGAACATTGAATTAAAGAACTC
CGTCTTCA

protein sequence of NO06G00160.1

>NO06G00160.1-protein ID=NO06G00160.1-protein|Name=NO06G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bp
MESNSRSSSFTCPAFSQNAAYMATYNGSMKLDHERIFMTTHRRLRRDTRT
AHWLLNLISTLSSLATEVCSHMLRTVTIPATFALVAVVAAWIAPGACAAN
RCVQTCLMPYGTNTTASIKASCRDACKLTAPIRRQCLKLEKSLWREPTKT
CRRSLRNIKRGLAPLTLNVTLTTPINATTSIPTTYTYTFDSECAKEIRRE
QKFERKTCRELMCPLNEYWTFEAQGCHVHNSGVAVAATKSPPLPALLRGF
YKFSWTGSSDYQGPKDTNMGVTFTGRLPGDPEANIAPMTKNAINLLSYGG
GNEFGAWSLAVTQAVADSSNLDAVIALNYDGIVIDAEVYATGQTVTVAEW
NTMFAAIKARNLLLIVTISHFSPYGMPNANALVVDWLSNPLIDYLSPQLY
TSGTETENDWEGFNSAWVSASTPIAPSIVQKSYYDQLGSNSVTTYLPNAK
GYLVWSNTPPPKPGPGPTCVSGYFPGSGCAYMCSWCAQQLQTNNYYWTTG
VCTYQDPVGCVGSPMAGVEYTCCRIE*

mRNA from alignment at chr6:69351..73459+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO06G00160.1 ID=NO06G00160.1|Name=NO06G00160.1|organism=Nannochloropsis oceanica|type=mRNA|length=4109bp|location=Sequence derived from alignment at chr6:69351..73459+ (Nannochloropsis oceanica)
CTGAATTGGAAAGCGGATATAGAATTGAGGCGTGATTGACATTTCTTTGC
TTTCCCCAGCACCACTCCCTGTCACCCCTCTCTGTCTGCCTCCATCAAAA
CGGAGTCCCAAGCGCGAATCAGTATCCATTCAATCCCTCTATCCCTTTCC
TCCTTCTTTAAACTCTCTATTTTTCGTTTCTTCTATCCTTCTTCCCCGAA
AATTCGGGACACATTTACCACGATGAGATGGCCAGCTATAAGACATCCCT
TCGAGGAATGGAAGGAGAGACAACAGAAGGGCACAAAGCTACAAAGGTCC
CCAAAAAAGAAAGGCAGCGAGACCAGATGAAAGTATGAAAGTTTGAACCG
CGGCAAGTTGGATGGCAAGAAGGAGACGTTGGGTAAGGTCACGAGAGAGG
AAGGAGAGAATAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGGAGAAGT
CAAAGGCCTTCCCCAAATGAACGCAAGTGAAAGAATTTCTGGTGATATAG
AATGAGCTATAGATAGAGGGAAAGAGTATGGAGTGGAACGGTCATTCCTC
TTCCCCATGGAGTGCTTGAGATTTAACCTAGCCAACGTATGAGAGAGTGT
CGTAGAAGCAGCTGAGGTGGTAGGAAGGGGGAAGGGAGCAAGAGGGTGTA
CCCCATTCCACCGCCGTATGCACGTTTATATGGTTTCACCTAATACTCCT
CCCTCAAATAAAGGAAGACGAGGAGGACGGGGATGGCCAATCATAAATAC
ATACATAAGAGTTAGGGCAAGTCTTTATTTTTACACCAAAGCTAGCGTGG
GCGATGGTGGGGATGATGACATGGATGACGCGCCATTCACTATCGATATA
CCTAAAATTTGGGTAGCGGGCGATGTGTCGTGTGTGGAGACGGACTATAC
AGAAAGTTATGTATTTTTTTTTTGCTCTTTTTATTTTTTTGGGGTTAAAA
TTACCATTACCTGCTTTACCCCCGACATGTTGGCATCTACTTCTATCATA
CTGTGAGCAGCAAAATAAGCCCGCCCCACGTGACGGGGTAGCTGCCGGCA
TCAGGCCACCAGCGTTTTCGCGGGATGATGACGCCATCCCACTCTGAACA
AGCCGCTCCTTTGGCTGCTTGTGCTTGGAGAATGCCGAGCTTGGTTGAGA
CAAGAAGTCGACGGAGAAAGGCGAAGTTCTATATGCCATCTCTTCTGCCT
GGTGTTGGTCAGAGACAATTTCTGATTGAGGGGTCGAAACGCTCAGGAAG
AGGGCTTCCTTTGAATATGTCCGAGGTGTTCCGTTTGCCACCACTTTGTC
GCACGCGTGTATGATAAATAGGTCGCCTTCTCCTAAAGGTTGGAAGCTAT
GGCCCTGAAGAGGCTGACCACGAACTTTGACGGCACGTGACGAAATATTA
TAGAGGCAAAACATGGATGGGAAGAAAACATCTTTTGTAAATGCACAACG
AAAAACGAAAAATAAGCAGACTATTGAGGATGAGGACTTGATGACTGACT
CTGTTTTTTTGCTGTTTTTTGGGGGTTTGGTGGTCTATTCACAAATAAAG
CACTCGATGACTGACCCATTTTTGTAGTTGTTTTGTGGGGGTTTTGGGGT
TCATTCACAATAAACCACGTTTTTTATTTTTTGGGGGACAAATTCATAGA
AACGCCCGAGCGTTTCGACCCAACGCCCTTTCGCCTGGTGACGATGGCAG
TACTGGGGATGTTCTGCAGCTGATACTGCTGGCACAATGTACAATATAAT
TGCTTAGTGCGGGTTGTGAGGCAACTGTGGTTTGGGGGGGGATAGCCATA
TGTTAAGCCGCAAAGAAACTTTCGTGTGATCGTTACGGGCCATAAGAATT
GTACAGGTATGGCTTAGGGGGAGTCGAAACGCTCGGGAACAGCGTTCCCG
TGATATGTCCCAAGCGTTCAATATAAAACGTATTTACACATAGCACGGAT
GGAGTCCAATTCGAGGTCTTCAAGCTTCACCTGTCCTGCATTTAGTCAAA
ATGCAGCATACATGGCCACATACAATGGCAGCATGAAGCTCGATCATGAA
CGTATCTTCATGACCACCCATAGAAGACTACGTCGAGACACCCGTACGGC
CCACTGGCTCCTAAACCTCATATCCACCCTCTCATCCCTCGCCACAGAAG
TTTGCAGTCATATGCTACGCACTGTGACCATCCCCGCCACCTTTGCCCTC
GTGGCTGTCGTGGCAGCCTGGATAGCCCCTGGAGCATGTGCTGCCAATCG
CTGTGTTCAGACCTGTCTGATGCCCTATGGAACCAATACAACGGCGTCCA
TTAAGGCCAGCTGCCGCGATGCATGCAAGCTCACCGCCCCCATACGTCGC
CAATGCCTCAAACTGGAAAAATCTCTCTGGCGCGAGCCGACCAAGACCTG
CCGCAGGAGCCTGCGGAATATCAAGCGGGGCCTCGCACCACTGACCCTTA
ATGTTACGCTCACGACGCCAATCAACGCGACGACGAGTATTCCTACCACT
TACACATACACGTTTGATTCAGAGTGCGCCAAGGAGATCAGACGAGAGCA
AAAATTTGAAAGAAAGACCTGCCGTGAGCTTATGTGCCCTTTGAATGAAT
ACTGGACTTTTGAGGCGCAAGGATGCCATGTTCATAACTCTGGTGTAGCG
GTAGCTGCTACGAAAAGCCCTCCCCTTCCAGCGCTTTTGCGGGGTTTCTA
CAAATTTTCCTGGACAGGCTCCTCGGACTACCAGGGACCCAAGGATACCA
ATATGGGCGTGACTTTTACTGGCCGACTGCCCGGAGATCCCGAAGCAAAT
ATTGCTCCGATGACCAAGAATGCCATAAATTTGCTCTCTTATGGTGGTGG
CAACGAGTTCGGGGCCTGGTCATTAGCAGTCACACAGGCTGTGGCAGACT
CGAGCAATTTGGATGCTGTAATTGCCCTGAATTACGATGGCATTGTGATT
GACGCAGAAGTCTACGCAACAGGCCAAACAGTGACGGTAGCGGAGTGGAA
CACCATGTTTGCGGCGATCAAAGCGCGAAACTTATTGCTCATTGTGACCA
TCTCTCACTTCTCTCCGTACGGAATGCCCAATGCTAACGCGCTTGTGGTC
GATTGGCTGTCGAACCCACTTATCGATTACCTTTCCCCTCAATTGTACAC
CTCTGGGACCGAAACCGAGAACGATTGGGAGGGTTTTAACAGCGCTTGGG
TATCTGCTTCCACACCGATTGCCCCATCCATTGTTCAGAAATCATACTAC
GACCAGCTGGGTTCCAATTCGGTCACTACATACCTGCCCAACGCCAAGGG
CTACCTGGTGTGGAGTAACACACCGCCGCCAAAGCCGGGACCAGGCCCCA
CCTGCGTGAGTGGATACTTTCCGGTACGTGTGAGGGAGGTAAAGGGAGGG
GAGGAATGTTGGAGCCAAGAAAAGGTTGGCTTTGGGCGCTCATAAATTCT
TGTACTAAGTTGACATGATGACTGTGCTCTGTAAATACCACTATTTCTAT
TTTCTCGTATATTTCTCTTTACTCTTGTCTCACTTCTTTGCATTTTCAGG
CAAACACACCGATTTATAAAATATGTAATATGCTCAAACATTTCTCCTCA
ATCCTCTCTTTCTCCCCAATATAGGGAAGCGGCTGTGCCTACATGTGCTC
TTGGTGCGCACAGCAACTTCAGACGAACAATTATTACTGGACGACGGGCG
TCTGCACGTACCAGGACCCCGTCGGCTGTGTGGGCAGTCCCATGGCCGGC
GTGGAGTACACGTGCTGTCGCATTGAGTAAACGACGAGCAGGGTAGAATC
GGCGCGAGCAAGCGGGTATATGTGGTATACATACAAATGAGGGGGGACAT
GAGACAAAAAGATGTGACAGAATCTGGGCTACCCCCCCTTGTGTTGGGTG
TATACGCAGCTGCTCTTTTGTGCGTATGGTAGAACAATTTTGCTCTGATG
AACGGAAAGCTGGATGAAAGCATCAATAGAAAAAGTATGCGAAAAATAAG
AAGGGTGATTAGAATGCCGGGTAGGATGCGGTGACTATTTACAATCACCA
GAAAAAGCATAGGATTCAAAAGCGTAGCGCGAACATTGAATTAAAGAACT
CCGTCTTCA

Coding sequence (CDS) from alignment at chr6:69351..73459+

>NO06G00160.1 ID=NO06G00160.1|Name=NO06G00160.1|organism=Nannochloropsis oceanica|type=CDS|length=1581bp|location=Sequence derived from alignment at chr6:69351..73459+ (Nannochloropsis oceanica)
ATGGAGTCCAATTCGAGGTCTTCAAGCTTCACCTGTCCTGCATTTAGTCA
AAATGCAGCATACATGGCCACATACAATGGCAGCATGAAGCTCGATCATG
AACGTATCTTCATGACCACCCATAGAAGACTACGTCGAGACACCCGTACG
GCCCACTGGCTCCTAAACCTCATATCCACCCTCTCATCCCTCGCCACAGA
AGTTTGCAGTCATATGCTACGCACTGTGACCATCCCCGCCACCTTTGCCC
TCGTGGCTGTCGTGGCAGCCTGGATAGCCCCTGGAGCATGTGCTGCCAAT
CGCTGTGTTCAGACCTGTCTGATGCCCTATGGAACCAATACAACGGCGTC
CATTAAGGCCAGCTGCCGCGATGCATGCAAGCTCACCGCCCCCATACGTC
GCCAATGCCTCAAACTGGAAAAATCTCTCTGGCGCGAGCCGACCAAGACC
TGCCGCAGGAGCCTGCGGAATATCAAGCGGGGCCTCGCACCACTGACCCT
TAATGTTACGCTCACGACGCCAATCAACGCGACGACGAGTATTCCTACCA
CTTACACATACACGTTTGATTCAGAGTGCGCCAAGGAGATCAGACGAGAG
CAAAAATTTGAAAGAAAGACCTGCCGTGAGCTTATGTGCCCTTTGAATGA
ATACTGGACTTTTGAGGCGCAAGGATGCCATGTTCATAACTCTGGTGTAG
CGGTAGCTGCTACGAAAAGCCCTCCCCTTCCAGCGCTTTTGCGGGGTTTC
TACAAATTTTCCTGGACAGGCTCCTCGGACTACCAGGGACCCAAGGATAC
CAATATGGGCGTGACTTTTACTGGCCGACTGCCCGGAGATCCCGAAGCAA
ATATTGCTCCGATGACCAAGAATGCCATAAATTTGCTCTCTTATGGTGGT
GGCAACGAGTTCGGGGCCTGGTCATTAGCAGTCACACAGGCTGTGGCAGA
CTCGAGCAATTTGGATGCTGTAATTGCCCTGAATTACGATGGCATTGTGA
TTGACGCAGAAGTCTACGCAACAGGCCAAACAGTGACGGTAGCGGAGTGG
AACACCATGTTTGCGGCGATCAAAGCGCGAAACTTATTGCTCATTGTGAC
CATCTCTCACTTCTCTCCGTACGGAATGCCCAATGCTAACGCGCTTGTGG
TCGATTGGCTGTCGAACCCACTTATCGATTACCTTTCCCCTCAATTGTAC
ACCTCTGGGACCGAAACCGAGAACGATTGGGAGGGTTTTAACAGCGCTTG
GGTATCTGCTTCCACACCGATTGCCCCATCCATTGTTCAGAAATCATACT
ACGACCAGCTGGGTTCCAATTCGGTCACTACATACCTGCCCAACGCCAAG
GGCTACCTGGTGTGGAGTAACACACCGCCGCCAAAGCCGGGACCAGGCCC
CACCTGCGTGAGTGGATACTTTCCGGGAAGCGGCTGTGCCTACATGTGCT
CTTGGTGCGCACAGCAACTTCAGACGAACAATTATTACTGGACGACGGGC
GTCTGCACGTACCAGGACCCCGTCGGCTGTGTGGGCAGTCCCATGGCCGG
CGTGGAGTACACGTGCTGTCGCATTGAGTAA

Synonyms

Publications