NO06G00110, NO06G00110 (gene) Nannochloropsis oceanica

Overview
NameNO06G00110
Unique NameNO06G00110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3949
Alignment locationchr6:51397..55345 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein phosphatase 1 regulatory subunit 7
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:51397..55345 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR025875Leu-rich_rpt_4
IPR003591Leu-rich_rpt_typical-subtyp
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00110.1NO06G00110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00110.1NO06G00110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00110 ID=NO06G00110|Name=NO06G00110|organism=Nannochloropsis oceanica|type=gene|length=3949bp
CACACAGGAATAGCACCGCGACTATAAGCATGGAGGATGTCGGCAGCAAG
CCCGTGGCGGCAGCGTGCCAAGAAGCGGTGGCTGCGGAAAAGCAAGGgta
agtgtgtctaccggtaacatgtgttgaggtttgatgtctttcacgcatta
gcagcccctcacctacacatccaaccaacacacgtacatttagAGAAGCT
GCACCAGGAGGCGAAGCAGAGAACGCAGGGGCAGAGGCACCAGCAGCGAC
TGCGCACCAGCATGTCCACCCACATCATAACGGAGGAGGAGGAGGAGAGG
CAACGGCCTGTTGCGACCATTCGCCGGGTGATGGAGCAGGAGGAGGAGGA
ATTGCAGGAGAAGgtaaaatactcaagggtcgtgctcggagaggccagca
catgcgcaagcgtcatgtttcccatccgtcccttccttccttcctcacat
cttctttcctttgttcctttcttcccgccctccgtccggtcacagCCACG
GCCATCGTCACCCCTGCAGACGCCACGACTCTGAACCCGGACGACGAGGC
CTTGCTCATTGTCGGCACTCTCGGGCTGAAGgtgaaggagggagcgaagg
gaggaggacgggagggcgggagggaaagagggagatgcattcacttacat
ctctaccctctttttctccctccctccgtccctcaaccccgcctttctcg
tcagGTCAATAAAATAGCGGGCTTGGAAGTCATGACTCAATTGAAGGAGC
TTGTTCTCCGCTCCTCCCTCATTGCACGGATGGAGAACCTGTCCACGTTG
ACGGgtgagggcctccctccctccctccctccctccctccctccctccct
ttctccctccctccctccctccctctctttctccctcggttactccctcc
tttcctccctcccttccccaatccctttctcggttactccgtccttcgat
ggcccccatttgtcctctcattgcgtggatattgaggtgctcaattctga
ccagcagaattgcaggcaacgatgaggagggagatgggagggagggaggg
agagagggagggaggaagggtgcggtccagtggagttaacacataacacc
cacgcggtcacagGCCTTACGCACTTGGAGCTGTATGACAATCAGATTAC
CTCCCTGGAGgtacggagggagggagggagggagggagggaagggaggga
gggaggggagaggtgtgcatgaaatgtcgagagaggaagatggtgcgtct
ctcaatcattcacgtacctccctccctcccttcctccctccccctctccc
tccttcccttcttgttcagGAGCTGGAGCACCTCCCTCTCCTTACCACCC
TCGACATGTCCTACAATCTCATTCGATCGATGGCGGCCATCGCCCATTGC
CCCCTCCTGGAGgtacgccctccctccctccctccctccctccctccctc
cctccctccttttctcctttcacttctcctgcatgccttctttctctctc
tcatacatactcaaccgctccctccctctctcgctcgctccctccctctc
ttttcagGTGGTGTATCTGGCCAACAACAAGATCACCACCATGGCAGgta
cgtcctcaacagaaagggagggagagagggagggagggacagaatgactg
ggaattcattgttggcgcggactttatcttaccttctatccctccctccc
tccctccctccctccctccttccctgcctcctttcctccctctccccctc
cttccctccctccctccctccctccctccctccctcagGCCTGTCTGGAT
TGAAGCATCTCCGAGTCTTGGACCTGGGCGCTAATCGCATCCGACAAATC
GAGGGGCTGGAAGGCCTCGACTCCCTTCAGgtatacacagagagagagtg
agagagagagaggaacatatatatacacacacacacatatatatacacat
acacacatacatatatatacacacatacatacacacacatatgtgtatat
acatatatatgcacacatacatatatacacatatatacacacacatatat
gtatacacacatacacacatatatatatatatatatatacacttacacac
atacatatatatacacacacatacacacatgtatatatacatatacacac
atacatatatacacatacacacacatacatgtatatacatatatatatac
acacatacatatatacacatacacacacatacatatatacacatacacac
atatatatatacacacatacataaacacacatatatgtatatacatatat
atacacacacatagatatatacacacatatatgtatatacatatatatac
acacacatacatatgtacacatacacacacatatatatatacacacacat
acacacacacatatatacacacacacatacacacatatatatgtatatac
atatatacacacacatacatacacacatgtttatacatacacacatgtac
atacgccctccctctcttcctgcgtgtccggactctctacaggaacgtcg
ctataccctctcccccctccctccctcccgaccttcccccctccctccct
tccaccatgctcgctcaaaaatcttccatgcccatcccctcctccctccc
tccctccctccctcagGAGTTGTGGTTGGGCAAGAACAAGATCGAGGCCC
TCCCTCCCTCAGTTCTTGCTCCCATTAGGCAGACCCTAAGGAGGTTGGAC
GTGCAGAGCAATCGCCTGCGGAGTGCGGACGGACTGTCGTCGGAGGAAGg
tgagggagggagggagaaagggaaggagggagggagggagggagggaggg
agggagggagggagggagggagggaaggtagtctaatccaaatcttctac
atctgtatctcctgccctcacgaaacaccctctccctccctccctccctc
cctcactcccccccttccccagACGGCCGCCTATCGCAGCTGGAGGAGCT
CTACTTAGGACATAACGCTCTTGAGGATATGCAGGCTTTCGTCGGTCTCG
AGAGGCTCCACACCTTGgtaacccctccctcgctccctccctccctccct
ccctccctcccttccttcctccctcccttgcttcattcctacgtttcctc
ctcccgccgctaaccctctctccccccctccctcctccagGACCTCAGCG
GCAATCAAGTCAAGTCACTGACAGGCGTAGAAACCCTCCTCTCCCTCGAA
GAGCTCTGGATGTCCTACAACCAGgtacagcctccctccctccctccctc
cctccctccctccctctctccctccctccctccctccttccttccccgtt
tccttctctccctgtacgctcccttgcctttccctccctccctccctccc
tccctccctccctcctacctaccctcctactctccctctctccctccaac
cgctccatcccctcctcacctcgccctccctccctccctccctcccaccc
gcagGTGGGTAGCTTCGACGAACTTGGACCATTGGTCTCCTTGCCGGGTC
TGCAGTGCATCTACCTCGAGCACAATCCTATCTACAAgtaaggagggagg
gagggagggagggagggagggagggggcatcagacgcagtcattccccgt
gatcgaagtaaattctgacgccctcttcctccctcccttcctccctccct
ccttccttccccccctccagGGAATTCGAGTACCGGATGAAAATTGCTGC
TCTCCTCCCCGCCCTCAAGCAGCTCGATGCCACTCCCATCCCGGGCCGAT
GAGATGCTCCCCCTCCCTCTCTCCCCTCCCTCCTTCCCTCCCCTCCCTTC
GCTCCTTCCCTCCCTCCCTTCCTCAAGCGGTTCAACGCCACCGCAATCCC
TGACGTAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAA
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protein sequence of NO06G00110.1

>NO06G00110.1-protein ID=NO06G00110.1-protein|Name=NO06G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bp
MEDVGSKPVAAACQEAVAAEKQGEAAPGGEAENAGAEAPAATAHQHVHPH
HNGGGGGEATACCDHSPGDGAGGGGIAGEATAIVTPADATTLNPDDEALL
IVGTLGLKVNKIAGLEVMTQLKELVLRSSLIARMENLSTLTGLTHLELYD
NQITSLEELEHLPLLTTLDMSYNLIRSMAAIAHCPLLEVVYLANNKITTM
AGLSGLKHLRVLDLGANRIRQIEGLEGLDSLQELWLGKNKIEALPPSVLA
PIRQTLRRLDVQSNRLRSADGLSSEEDGRLSQLEELYLGHNALEDMQAFV
GLERLHTLDLSGNQVKSLTGVETLLSLEELWMSYNQVGSFDELGPLVSLP
GLQCIYLEHNPIYKEFEYRMKIAALLPALKQLDATPIPGR*
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Synonyms
Publications