NO05G04420, NO05G04420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04420 vs. NCBI_GenBank
Match: EWM28043.1 (dehydrogenase reductase sdr family member 13 precursor [Nannochloropsis gaditana]) HSP 1 Score: 591.7 bits (1524), Expect = 1.600e-165 Identity = 290/371 (78.17%), Postives = 325/371 (87.60%), Query Frame = 0 Query: 1 MLTPLHWVWNGPLALGWVVGSSIVFPVLRKLGLAAEPNTLDF-TNDMRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTS-RYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPANARAVAKELWYQSDKLVIQH 370 MLTPLHW+WNGPLALGWV S+IVFP+LRK+GL E N LDF NDMRGK +IVTGSNTGIG+ATALNI KMGATV+LACRS+ERAKAA+++ML L +LD R+DFPFA KGT VC+ LDL SFASIK FA+++ + KRLDALVLNAGLANGSG TKEGFE+M GTNYLGHFYL KLL+DV+KATPDSR+VSVSSLMHEFGCLDWQGSL Y +LKDR+FSSRYNDSKLALVL+TLELRHRLKGTSVRA+AVSPGAVASDIWRSFP WY+RLVLDPV SLAFLSNEQGSIPSV+AATH + ED ++ET+V YFHPYWSPS FLMP+EVMGPF GF RA PRLP NARAVAKELWY+S+K VIQH Sbjct: 1 MLTPLHWIWNGPLALGWVTSSAIVFPILRKVGLVPEANKLDFIANDMRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELWYESEKQVIQH 371
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_005854665.1 (short-chain dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU21699.1 short-chain dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 502.7 bits (1293), Expect = 1.000e-138 Identity = 249/315 (79.05%), Postives = 278/315 (88.25%), Query Frame = 0 Query: 46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTS-RYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPANARAVAKELW 360 MRGK +IVTGSNTGIG+ATALNI KMGATV+LACRS+ERAKAA+++ML L +LD R+DFPFA KGT VC+ LDL SFASIK FA+++ + KRLDALVLNAGLANGSG TKEGFE+M GTNYLGHFYL KLL+DV+KATPDSR+VSVSSLMHEFGCLDWQGSL Y +LKDR+FSSRYNDSKLALVL+TLELRHRLKGTSVRA+AVSPGAVASDIWRSFP WY+RLVLDPV SLAFLSNEQGSIPSV+AATH + ED ++ET+V YFHPYWSPS FLMP+EVMGPF GF RA PRLP NARAVAKELW Sbjct: 1 MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELW 315
BLAST of NO05G04420 vs. NCBI_GenBank
Match: CBN79146.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 215.3 bits (547), Expect = 3.200e-52 Identity = 136/331 (41.09%), Postives = 190/331 (57.40%), Query Frame = 0 Query: 45 DMRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAA----QEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKL-KRLDALVLNA--GLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRL--KGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPANARAVAKELWYQSDKLV 367 D+ G+ +IVTG+NTGIG TA N+AK GA V++ACRSLER ++A +E+M L ++ A +GT + DLS S++ FA+E++ K RLD LV NA G+ +G T +G +++ G N++GHF L LL ++++TP +RVV +SS+MH G DW+ ++ + S Y DSKLA+V+ EL+ R G+S AVAV+PGAV SDIWR+ P V D FL++EQGS SV AA ALPLE Y+ PYW P R L PFEV GPF G P+L + A LW ++++ Sbjct: 42 DLSGRVVIVTGANTGIGSRTAFNLAKAGAKVIMACRSLERGESARQQLEEEMRETLSKVEGGG-GASAARQGTLEVMKCDLSELESVRTFAREFKVKHGDRLDVLVNNAGVGITDGPRVTADGLDLVFGVNFVGHFCLTNELLPLIQSTPAARVVCLSSVMHHSGGTDWESAVMG-----HPKRRGSTYADSKLAMVIFAKELKKRFAAAGSSATAVAVNPGAVRSDIWRNVPKLVMP-VFDLFMRFLFLTSEQGSYTSVRAA---ALPLETVSGSG---YYQPYWMPFKRPL-PFEVFGPFVGCAPGLPKLVKDEPAATSALWTTCERVI 358
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_005832591.1 (hypothetical protein GUITHDRAFT_108486 [Guillardia theta CCMP2712] >EKX45611.1 hypothetical protein GUITHDRAFT_108486 [Guillardia theta CCMP2712]) HSP 1 Score: 187.2 bits (474), Expect = 9.300e-44 Identity = 129/331 (38.97%), Postives = 185/331 (55.89%), Query Frame = 0 Query: 46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAA----KGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGT-----TKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSF--PSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPANARAVAKELWYQSDKL 366 M GKT+IVTG+N GIGK TA ++ GA V++ACRSL+R +AA++++ L + ++SR + G + LD+S S+K FA + ++D LV NAG+ NG GT T +G + GTN++GHF L +LL L + R+V++SS+MH +G D + SS K + +Y +SKLA+V LT EL+ + T V +VAV+PG VASDIWR S R+ ++ LA L +QG+ SV AA + E+ LY PYW PS L PFE+MG F G PR+ N + ++ ELW + KL Sbjct: 1 MEGKTVIVTGANAGIGKTTAASLYANGACVIMACRSLQRGEAARQEIEAMLASPESSRKQLWIHSDRPHPGKLLVRELDVSDLESVKRFAISIVKEFSKIDVLVNNAGI-NGMGTDIPSKTPQGIPFIFGTNFVGHFLLTRLLHPNLSKSGGGRIVNLSSVMHHWGSKD----VSKAVSSGK---YPRQYQNSKLAMVHLTAELQRQYAETRVSSVAVNPGFVASDIWRGIRPDSLVGRMFRLAMAVLA-LDTKQGAATSVAAA---CMSDEEICGSKVPLYLVPYWVPSFARL-PFEMMGVFTGVHSCPPRVSKNEKQISMELWKECTKL 318
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_017277488.1 (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Kryptolebias marmoratus]) HSP 1 Score: 176.4 bits (446), Expect = 1.600e-40 Identity = 109/260 (41.92%), Postives = 158/260 (60.77%), Query Frame = 0 Query: 46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQ--GSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304 ++GKT+IVTGSNTGIGKATAL +AK GA V+LACRS ERA+AA A D R + + + LDL+S S+++FA+ + RLD L+ NAG+ SG T++GF + G N+LGHF L LLL+ LK SRVV+VS+L+H FG +D+ S ++ S Y +SKL VL T EL ++L+GT+V ++ PG ++++I R+ W ++L++ P++ L FL E GS ++H A L Sbjct: 34 LKGKTVIVTGSNTGIGKATALELAKRGARVILACRSKERAEAA---------AFDIRRE----SGNNQVLFMQLDLASLKSVRSFAETFLKSEPRLDILINNAGVI-ASGRTEDGFGLAFGVNHLGHFLLTNLLLERLKQCGPSRVVTVSALLHRFGSIDFPLLASRKDLVSGESTWQSIQAYCNSKLCNVLFTRELANQLEGTNVSCYSLHPGVISTEIGRNLSPW-QQLLMKPLAKLFFLDLEGGSQTTLHCALQEGL 278
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_020793398.1 (dehydrogenase/reductase SDR family member 13-like [Boleophthalmus pectinirostris]) HSP 1 Score: 175.6 bits (444), Expect = 2.800e-40 Identity = 111/258 (43.02%), Postives = 149/258 (57.75%), Query Frame = 0 Query: 46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304 + GKT IVTGSNTGIGKATAL +AK GA V+LACRS ERA+AA D+ + + +PLDLSS S++ FAQ + RLD L+ NAG+ G+G T++GF + G N++GHF L LLLD LK SR+V+V+SL+H FG +D+ Q K L R Y SKL L T EL +RL+GT+V V PG V +++ R+ W+ +L P+S L FL E G+ ++H L Sbjct: 34 LHGKTAIVTGSNTGIGKATALCLAKRGARVILACRSKERAEAAVYDIRKE-------------SGNQQVLFMPLDLSSLQSVRDFAQTFLKTEPRLDFLINNAGVI-GAGRTQDGFGMEFGVNHMGHFLLTLLLLDRLKQCAPSRIVTVTSLLHRFGDVDFALLDQTKDLGLFTRERLQAYCHSKLCNSLFTRELANRLEGTNVSCFCVHPGVVRTELGRN-SQWWMNALLTPISRLFFLDPEGGAQTTLHCVLQEGL 276
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_022538879.1 (dehydrogenase/reductase SDR family member 13-like [Astyanax mexicanus]) HSP 1 Score: 175.3 bits (443), Expect = 3.700e-40 Identity = 109/265 (41.13%), Postives = 158/265 (59.62%), Query Frame = 0 Query: 46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFS-------SRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304 ++GKT IVTGSNTGIGKATAL++AK GA V+LACR+ ++A+AA D+ R + + + +PLDL+S S++ FA+ + RLD L+ NAGL G G T++GF + G N+LGHF L LLLD LKA+ SR+V+VS+L+H G +D+ N ++ KD + Y SKL VL T EL +RL+GT V ++ PG + +D R+ W RL++ P + + FLS E+G+ ++H A L Sbjct: 34 LQGKTAIVTGSNTGIGKATALDLAKRGARVILACRNKQKAEAAVFDI----------RRE---SGNTAVLFMPLDLASLKSVRTFAETFLKTEPRLDLLINNAGLM-GPGRTEDGFGIAFGVNHLGHFLLTLLLLDRLKASGQSRIVNVSALLHRLGSVDF-----NTLNTHKDLVTGQSSWHCFKAYCHSKLCNVLFTRELANRLEGTGVTCYSLHPGVIHTDFGRNMGQW-MRLMMLPFAKIFFLSTEEGAQTTLHCALQEGL 278
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_017552357.1 (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Pygocentrus nattereri]) HSP 1 Score: 174.5 bits (441), Expect = 6.200e-40 Identity = 107/262 (40.84%), Postives = 159/262 (60.69%), Query Frame = 0 Query: 46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFS----SRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304 ++G+T +VTGSNTGIGKATAL++AK GA V+LACR+ E+A+AA D+ R + + + + LDL+S S+++FA+ + RLD L+ NAG+ G G T++GF + G N+LGHF L LLLD LKA+ +SR+++VS+L+H G +D+ + N + +L S Y SKL VL T EL + L+GTSV ++ PG +A+D R+ W + L+L P S L FL +E G+ ++H A L Sbjct: 34 LKGRTAVVTGSNTGIGKATALDLAKRGARVILACRNQEKAEAAVYDI----------RRE---SGNAAVLFMHLDLASLKSVRSFAETFLKTEPRLDLLINNAGMM-GPGRTEDGFGMAFGVNHLGHFLLTLLLLDRLKASGNSRIINVSALLHRLGSVDF--NTLNTHKALVTGQSSWHCFRAYCHSKLCNVLFTRELANHLEGTSVTCYSLHPGVIATDFVRNMSLWVRLLLLLPFSKLFFLDSEGGAQTTLHCALQDGL 279
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_024121109.1 (dehydrogenase/reductase SDR family member 13-like [Oryzias melastigma]) HSP 1 Score: 174.5 bits (441), Expect = 6.200e-40 Identity = 105/255 (41.18%), Postives = 155/255 (60.78%), Query Frame = 0 Query: 46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQ--GSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAA 299 ++GKTI+VTGSNTGIGK+TAL++AK GA V+LACR+ ERA+AA D+ + V +P+DL+SF S+++FA+ + RLD L+ NAG+ G G T +GF + G N+LGHF L LLL+ LK SRVV+VSSL+H G +D+ S ++ S Y +SKL VL T EL + L+GT V + PG V +++ R+ SW+++L++ P++ L FL + GS ++H + Sbjct: 34 LKGKTIVVTGSNTGIGKSTALDLAKRGARVILACRNSERAEAAVFDIRKE-------------SGNSQVVFMPMDLASFKSVRSFAETFLKTEPRLDILINNAGMM-GPGRTGDGFGMAFGVNHLGHFLLTNLLLERLKQCSPSRVVTVSSLLHHLGRIDFSLLESTKDLVSGQSTWQNFQAYCNSKLCNVLFTRELANHLEGTGVTCFTLHPGVVYTELCRNI-SWWQQLLMIPIAKLFFLDTDGGSQTTLHCS 273
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_015807550.1 (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Nothobranchius furzeri]) HSP 1 Score: 174.1 bits (440), Expect = 8.100e-40 Identity = 113/294 (38.44%), Postives = 167/294 (56.80%), Query Frame = 0 Query: 13 LALGWVVGSSIVFPVLRKLGLAAEPNTLDFTNDMRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSL---KDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304 LA+G +G++ ++ + G ++ GKT+IVTGSNTGIG+ TA+N+A+ GA V+LACR +R +AAQED+ R + + V + LDL S S+++FA+ + RLD L+ NAG+ G TK+GF +M G N+LGHF L LLL+ LK + SR+V+VSS+ H FG +D+ +K L R+F Y DSKL VL EL RL+GT V A+ PGA++S++ R+ S ++L PV+ L F + QG ++H A + Sbjct: 6 LAVGVFIGAAFIYHHIVVKGKKCTSKA-----ELHGKTVIVTGSNTGIGRTTAINLARRGARVILACRCKQRGEAAQEDI----------RRE---SGSNQVVFMQLDLGSLESVRSFAETFLKSEPRLDLLINNAGICM-QGRTKDGFGLMFGVNHLGHFLLTNLLLERLKESAPSRIVNVSSMAHNFGKIDFDSLNTHKCLGLGTSSVRVFQI-YCDSKLCNVLFNHELAKRLQGTRVTCYALHPGAISSELGRNTSS-LLHVLLKPVTVLFFKNTVQGCQTTLHCALQEGI 278 The following BLAST results are available for this feature:
BLAST of NO05G04420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04420 ID=NO05G04420|Name=NO05G04420|organism=Nannochloropsis oceanica|type=gene|length=1240bpback to top protein sequence of NO05G04420.1 >NO05G04420.1-protein ID=NO05G04420.1-protein|Name=NO05G04420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bpback to top Synonyms
Publications
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