NO05G04260, NO05G04260 (gene) Nannochloropsis oceanica

Overview
NameNO05G04260
Unique NameNO05G04260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1832
Alignment locationchr5:1095214..1097045 +

Link to JBrowse

Properties
Property NameValue
DescriptionTransferase caf17 mitochondrial-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1095214..1097045 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO05G04260 vs. NCBI_GenBank
Match: EWM27992.1 (transferase caf17 mitochondrial-like protein [Nannochloropsis gaditana])

HSP 1 Score: 451.1 bits (1159), Expect = 4.400e-123
Identity = 258/480 (53.75%), Postives = 311/480 (64.79%), Query Frame = 0
Query:    3 SSTSTTRRRVAASWLQCASASATAASILRAPKTPRRLSSSSTIPTRWDPHVMATNRSGGIWEVDLTRGESNGKRCILQLAGPDAPKLVQGLITNDIVHLTEAKASLAAAFLTNKGRVITESVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLTATARVCVVLGLPDEVLVDLDVVKKHWTGRGEEVLGLGPDPRIALPGQHPLGIRAIV-TPSPAFP--FFCSXXXXXXXXXXPREVYEALRFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPVGSFSDFL----PFPSACPFMASPLIPCSSSSSTSSKGANIVDEITGKTVGSIVSCAKGSNLGLALFRLEHILAGGPKVRLVVAGKGKVGGEEREEKQMVRAFLPPWWPTALDLATGKV 476
            + ++T   RV  S  +  ++      I R   T  + S  S+  + WDP ++AT   G +WEVDLT GE +G+R ++QLAGP+APKLVQGLITNDI+HLT +KASLAA FLTNKGR+ITESVITIATDAKEAPHGGPDKFFLD+P++VK+GLL+HLRLFKLR+KV ITDL++TARVC ++GLP   + DL+ V++HW+ RG EVLGLGPDPR+ L  + PLGIR I+  P P+ P     S           RE  EALRFL+GVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQ+KGVIRKR+LP                                             PV    D L      P A PF+A P     S S    KGA I+D+ +GK VGS+VS A GSNLGLAL RLE  L     V+LV    G   GE+R+  Q V AFLP WWP+ +DLATGK+
Sbjct:   23 TGSTTCAARVRTSLEEIPTSLFRFQEIRRPGPTKPQRSRYSSATSTWDPQILAT--EGKLWEVDLTSGEGDGRRGVIQLAGPEAPKLVQGLITNDIIHLTGSKASLAAGFLTNKGRLITESVITIATDAKEAPHGGPDKFFLDVPIDVKKGLLQHLRLFKLRSKVTITDLSSTARVCALVGLPHARVSDLERVREHWSARGAEVLGLGPDPRVMLGDRFPLGIRGIIHFPDPSSPPSSLPSSARPLPCTQEAREALEALRFLYGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQFKGVIRKRLLPVFLFPDSLPPPSSKVEADMQR------------------------PVQKLGDLLLPSNANPLAAPFLAGP----PSPSPALVKGAEIIDKASGKAVGSLVSLATGSNLGLALLRLEPTLGAEQGVKLVARSPG-AEGEKRQ--QQVLAFLPDWWPSGIDLATGKI 469          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: XP_005853492.1 (folate-binding protein, partial [Nannochloropsis gaditana CCMP526] >XP_005855823.1 folate-binding protein, partial [Nannochloropsis gaditana CCMP526] >EKU20537.1 folate-binding protein, partial [Nannochloropsis gaditana CCMP526] >EKU22868.1 folate-binding protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 384.4 bits (986), Expect = 5.100e-103
Identity = 199/315 (63.17%), Postives = 241/315 (76.51%), Query Frame = 0
Query:    3 SSTSTTRRRVAASWLQCASASATAASILRAPKTPRRLSSSSTIPTRWDPHVMATNRSGGIWEVDLTRGESNGKRCILQLAGPDAPKLVQGLITNDIVHLTEAKASLAAAFLTNKGRVITESVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLTATARVCVVLGLPDEVLVDLDVVKKHWTGRGEEVLGLGPDPRIALPGQHPLGIRAIV-TPSPAFP--FFCSXXXXXXXXXXPREVYEALRFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLP 315
            + ++T   RV  S  +  ++      I R   T  + S  S+  + WDP ++AT   G +WEVDLT GE +G+R ++QLAGP+APKLVQGLITNDI+HLT +KASLAA FLTNKGR+ITESVITIATDAKEAPHGGPDKFFLD+P++VK+GLL+HLRLFKLR+KV ITDL++TARVC ++GLP   + DL+ V++HW+ RG EVLGLGPDPR+ L  + PLGIR I+  P P+ P     S           RE  EALRFL+GVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQ+KGVIRKR+LP
Sbjct:   25 TGSTTCAARVRTSLEEIPTSLFRFQEIRRPGPTKPQRSRYSSATSTWDPQILAT--EGKLWEVDLTSGEGDGRRGVIQLAGPEAPKLVQGLITNDIIHLTGSKASLAAGFLTNKGRLITESVITIATDAKEAPHGGPDKFFLDVPIDVKKGLLQHLRLFKLRSKVTITDLSSTARVCALVGLPHARVSDLERVREHWSARGAEVLGLGPDPRVMLGDRFPLGIRGIIHFPDPSSPPSSLPSSARPLPCTQEAREALEALRFLYGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQFKGVIRKRLLP 337          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: CBN79247.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 143.7 bits (361), Expect = 1.500e-30
Identity = 130/430 (30.23%), Postives = 182/430 (42.33%), Query Frame = 0
Query:   76 RCILQLAGPDAPKLVQGLITNDIVHLTE--AKASLAAAFLTNKGRVITESVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLTATARVCVVLGLPDEVLVDL----DVVKKHWTGRGEEVLGLGPDPRIALPGQHPLGIRAIVTPSPAFPFFCSXXXXXXXXXXPREVYEALRFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPVGSFSDFLPFPSACPFMASPLI--PCSSSSSTSSKGANIVDEIT-GKTVGSIVSCAKGSNLGLALFRLEHIL--AGGPKVRLVVAGKGKVGGEE-------------------REEKQMVRAFLPPWWPTALDLATGKV 476
            R +L+++G DA  L+QGL+TND+  L E     S++AAFL  KGRVI ++++T     +    G P                    L+KLR+KV+I D TA   V +V G+ D            V     GR  +  G G + R   P    LG+R I       P              P   Y ALR  +GVGEG +L++ +P E NLDL  +I+F KGCY+GQELTARTQ+KG +RKRVLP                                             P G+ + F P  ++       L+       ++    G+ +VD       +G++VS +   N+GLA+ RL  +L  A G          G  GG+E                    EE++     +PPWWP  LD  TGKV
Sbjct:   12 RAVLEISGVDAKALLQGLMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVT--RSPRHEAKGKP--------------------LYKLRSKVRIKDATALYDV-LVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGP--DGADWPDGDPVVPEGRYHALRMANGVGEGSELLDSIPLESNLDLLGSISFTKGCYVGQELTARTQFKGFVRKRVLP------------------------------------------VLFPEGAQTSFDPSAASDEGERQGLLLSRWGGVAAPPEAGSKVVDRAAEDGRLGALVSVSPEYNVGLAMLRLGKVLSPASGGTDASKTGNTGSAGGQEDSLAHPALDCRVVGASSQGEEERRRCLPLIPPWWPVDLDPTTGKV 374          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: XP_009526387.1 (hypothetical protein PHYSODRAFT_354565 [Phytophthora sojae] >EGZ17329.1 hypothetical protein PHYSODRAFT_354565 [Phytophthora sojae])

HSP 1 Score: 139.0 bits (349), Expect = 3.700e-29
Identity = 122/407 (29.98%), Postives = 175/407 (43.00%), Query Frame = 0
Query:   76 RCILQLAGPDAPKLVQGLITNDIVHLTEAKASLAAAFLTNKGRVITE-SVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLT-ATARVCVVLGLPDEVLVDLDVVKK-----HWTGRGEEVLGLGPDPRIALPGQHPLGIRAIVTPSPAFPFFCSXXXXXXXXXXPREVYEALRFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPVGSFSDFLPFPSACPFMASPLIPCSSSSSTSSKGANIVDEITGKTVGSIVSCAKGSNLGLALFRLEHILAGGPKVRLVVAGKGKVGGEEREEKQMVRAFLPPWWPTALDLATGKV 476
            R + QL G DA + +Q ++TND+ H+     +L   FL+ KGRV+ + +V+ +A DA          F LD   +V E L +H + +KLR KV+I D T A A    V     E    L   +K          GEE + +  DPR    G+H  G+RAIV      P   +              Y   R   GV EG +LV+ +P ECNLDL   ++F KGCY+GQELTARTQ+KG IRKR++P                                           A   G+  ++L        + +P I           G  IV     K VG+I + AK  +  +A+ RL H+L    +    V     +    ++       + P WWP +LD+ TGK+
Sbjct:   16 RRLTQLQGADAARFIQAVLTNDMKHVARRGDALYGGFLSTKGRVVGDCNVLQLADDA----------FLLDYDEDVAEALTKHWKRYKLRMKVKIEDKTDAYALYATVPAAVSEAGAALSPAEKVLDEMQSLNGGEETV-VYADPR----GEH-FGVRAIV------PIDSTLSLPEGYETMETSAYLDHRIALGVAEGKELVDGIPLECNLDLLKGVSFRKGCYVGQELTARTQFKGNIRKRLVP-------------------VALVPAEHQDVVKTLSELAFKPFDAPSHGALREYLADSKGWKDVKAPAI-----------GDKIVATGESKAVGTIFNVAKDVSSAIAMMRLGHLLPSESEAGETVPA---MKFSTQDGAFHAVPYQPSWWP-SLDVKTGKM 366          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: XP_001634154.1 (predicted protein [Nematostella vectensis] >EDO42091.1 predicted protein [Nematostella vectensis])

HSP 1 Score: 137.9 bits (346), Expect = 8.300e-29
Identity = 87/246 (35.37%), Postives = 129/246 (52.44%), Query Frame = 0
Query:   75 KRCILQLAGPDAPKLVQGLITNDI--VHLTEAKASLAAAFLTNKGRVITESVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLTATARVCVVLGLPDEVLVDLDVVKKHWTGRGEEVLGLGPDPRIALPGQHPLGIRAIVTPSPAFPFFCSXXXXXXXXXXPREVYEALRFLHGVGEGPD---LVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLPF 316
            KRCIL+++GPD+ K +QGL+TN+I   H      S+   FL  +GRV+ ++++     +K+  H     FF++    +   L +HL+ FKLR+K  I+     A   V   +  E +VDL   ++ W     +   + PDPR+   G        ++ PS   P  C           PR  YE  R   GV EG +   +   +P E NLD  + ++FHKGCY+GQELTART + GVIRKR++PF
Sbjct:   38 KRCILRVSGPDSVKFLQGLVTNNIELFHGDSTIRSMYTMFLNAQGRVLYDAIL-----SKDKTHSETPSFFIECDRSISAALTKHLKFFKLRSKADISH----AEGLVPWTVFSEEIVDLK-PEEDW-----KDFSIVPDPRVKKLGHR------LILPSDTDPSAC----IEGAGHAPRGAYEEHRARLGVCEGEEEIPIANAMPLEYNLDFLNGVSFHKGCYIGQELTARTHHTGVIRKRIMPF 258          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: ETI45475.1 (hypothetical protein F443_09969 [Phytophthora parasitica P1569] >ETK85421.1 hypothetical protein L915_09771 [Phytophthora parasitica] >ETL38838.1 hypothetical protein L916_09678 [Phytophthora parasitica] >ETM45256.1 hypothetical protein L914_09644 [Phytophthora parasitica] >ETP43336.1 hypothetical protein F442_09874 [Phytophthora parasitica P10297] >KUG00564.1 hypothetical protein AM587_10014747 [Phytophthora nicotianae])

HSP 1 Score: 134.8 bits (338), Expect = 7.000e-28
Identity = 97/257 (37.74%), Postives = 133/257 (51.75%), Query Frame = 0
Query:   76 RCILQLAGPDAPKLVQGLITNDIVHLTEAKASLAAAFLTNKGRVITE-SVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLT-ATARVCVVLGLPDEVLVDLDVVKKHWTGRGEEVLGLGP--------DPRIALPGQHPLGIRAIVTPSPAFPFFCSXXXXXXXXXXPREVYEAL--------RFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLP 315
            R + QL G DA + +Q ++TND+  +T    ++   FL++KGRV+ + +V+ +A DA          F LD   EV E L++H + +KLR KV+I D T A +    +  L DE    L    K      +E+  L P        DPR    G H  G+RAIV     F               P E YE +        R   GV EG +LV+ +P ECNLDL H ++F KGCY+GQELTARTQ+KG IRKR++P
Sbjct:   16 RRLTQLQGADASRFIQAVLTNDMTSVTRRGDAIYGGFLSSKGRVVGDCNVLQLADDA----------FLLDYDEEVAEPLMKHWKRYKLRMKVKIEDKTDAFSLYATLPALVDEEDAALTPSVKTL----DELQTLNPGDNSVVYADPR----GDH-FGVRAIVPTDETF-------------NVPEE-YETMDTSDYLDHRIALGVAEGKELVDGIPLECNLDLMHGVSFRKGCYVGQELTARTQFKGNIRKRLVP 239          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: ETL91974.1 (hypothetical protein L917_09597 [Phytophthora parasitica] >ETO74114.1 hypothetical protein F444_10065 [Phytophthora parasitica P1976] >ETP15280.1 hypothetical protein F441_09918 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 132.5 bits (332), Expect = 3.500e-27
Identity = 132/431 (30.63%), Postives = 186/431 (43.16%), Query Frame = 0
Query:   76 RCILQLAGPDAPKLVQGLITNDIVHLTEAKASLAAAFLTNKGRVITE-SVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLT-ATARVCVVLGLPDEVLVDLDVVKKHWTGRGEEVLGLGP--------DPRIALPGQHPLGIRAIVTPSPAFPFFCSXXXXXXXXXXPREVYEAL--------RFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPVGSFSDFLPFPSACPF--MASPLIPCSSSSSTSSK----------GANIVDEITGKTVGSIVSCAKGSNLGLALFRLEHIL-AGGPKVRLVVAGKGKVGGEEREEKQMVRAFLPPWWPTALDLATGKV 476
            R + QL G DA + +Q ++TND+  +T    ++   FL++KGRV+ + +V+ +A DA          F LD   EV E L++H + +KLR KV+I D T A +    +  L DE    L    K      +E+  L P        DPR    G H  G+RAIV     F               P E YE +        R   GV EG +LV+ +P ECNLDL H ++F KGCY+GQELTARTQ+KG IRKR++P                                           AL     +D +   S   F   A PL     S   +SK          G  IV     K VG+I +  K  +  +A+ RL ++  +   +V +V + K       ++       + P WWP  LDL TGK+
Sbjct:   16 RRLTQLQGADASRFIQAVLTNDMTSVTRRGDAIYGGFLSSKGRVVGDCNVLQLADDA----------FLLDYDEEVAEPLMKHWKRYKLRMKVKIEDKTDAFSLYATLPALVDEEDAALTPSVKTL----DELQTLNPGDNSVVYADPR----GDH-FGVRAIVPTDETF-------------NVPEE-YETMDTSDYLDHRIALGVAEGKELVDGIPLECNLDLMHGVSFRKGCYVGQELTARTQFKGNIRKRLVPM------------------------------------------ALIPSDQTDVVKTLSELAFKTFAEPLHGALRSYLAASKEWKGVKAPEIGDKIVSTGGTKAVGTIFNVGKDVSCAIAMMRLGNLFPSESEEVEVVPSMKFST----QDGAFHAVPYQPSWWP-QLDLKTGKM 366          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: GBG31292.1 (Aminomethyltransferase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 132.5 bits (332), Expect = 3.500e-27
Identity = 80/262 (30.53%), Postives = 129/262 (49.24%), Query Frame = 0
Query:   53 VMATNRSGGIWEVDLTRGESNGKRCILQLAGPDAPKLVQGLITNDIVHLTEAKASLAAAFLTNKGRVITESVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLTATARVCVVLGLPDEVLVDLDVVKKHWTGRGEEVLGLGPDPRIALPGQHPLGIRAIVTPSPAFPFFCSXXXXXXXXXXPREVYEALRFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLP 315
            +++++  G   E D         R +++++GPDA   +QG++TND+  L     +  AAFL NKGR++ E++I  A +         D + LDL  +V   +L+ L++FKLR+KV I D      V  ++G  +E    L+ +             LG   R+    +H    R ++                         Y+  R+L G+ EG ++   +P E NL+  + +NFHKGCY GQEL ART +KG++RKRV+P
Sbjct:    1 MLSSSTDGARPETDSAMYRKLLDRTVVEVSGPDATHFLQGIVTNDVSKLENEGEAQYAAFLNNKGRMVAETIIHRAAE---------DAYLLDLHQDVVNKVLKLLKMFKLRSKVSIEDAKGRYNVWAIMGGDEETKAGLNDIHAGAVIADPRDASLG--YRVVASAKHEEATRKVL-------------EKLGLKESSGHFYDQFRYLCGIPEGLEVDGGIPLEYNLEKLNGVNFHKGCYTGQELVARTHHKGLVRKRVVP 238          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: XP_024578384.1 (transferase caf17 mitochondrial-like [Plasmopara halstedii] >CEG42015.1 transferase caf17 mitochondrial-like [Plasmopara halstedii])

HSP 1 Score: 132.1 bits (331), Expect = 4.500e-27
Identity = 83/244 (34.02%), Postives = 124/244 (50.82%), Query Frame = 0
Query:   76 RCILQLAGPDAPKLVQGLITNDIVHLTEAKASLAAAFLTNKGRVITESVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLT----ATARVCVVLGLPDEVLV-DLDVVKKHWTGRGEEVLGLGPDPRIALPGQHPLGIRAIVTPSPAFPFFCSXXXXXXXXXXPREVYEALRFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLP 315
            R + QL G DA + +Q ++TND  HLT   +++   FL++KGR++ +  +    D         D F LD   ++KE L +H + +KLR  V+I D+T      A +  ++   D  LV  + ++ +  T   E    +  DPR         G RAIV      P   S              +   +   GV EG ++VE +P ECNLDL   ++F KGCY+GQELTARTQ+KG +RKR++P
Sbjct:   16 RQVTQLHGADASRFIQAVLTNDAKHLTHRGSAIYGGFLSSKGRIVGDCHVLQLAD---------DTFLLDYDDKLKEALFKHWKRYKLRMNVEIKDVTDAFDVYATISALVDDMDAALVPKIRMLDQLQTLNSENNAMIFADPR-----GKSFGTRAIV------PAGSSLNLPAGHEMMDASAFSDHQIALGVAEGKEMVEEIPLECNLDLMQGVSFQKGCYVGQELTARTQFKGNVRKRLVP 239          
BLAST of NO05G04260 vs. NCBI_GenBank
Match: XP_008893036.1 (hypothetical protein PPTG_01474 [Phytophthora parasitica INRA-310] >ETN21219.1 hypothetical protein PPTG_01474 [Phytophthora parasitica INRA-310])

HSP 1 Score: 131.7 bits (330), Expect = 5.900e-27
Identity = 132/431 (30.63%), Postives = 186/431 (43.16%), Query Frame = 0
Query:   76 RCILQLAGPDAPKLVQGLITNDIVHLTEAKASLAAAFLTNKGRVITE-SVITIATDAKEAPHGGPDKFFLDLPVEVKEGLLRHLRLFKLRAKVQITDLT-ATARVCVVLGLPDEVLVDLDVVKKHWTGRGEEVLGLGP--------DPRIALPGQHPLGIRAIVTPSPAFPFFCSXXXXXXXXXXPREVYEAL--------RFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTARTQYKGVIRKRVLPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPVGSFSDFLPFPSACPF--MASPLIPCSSSSSTSSK----------GANIVDEITGKTVGSIVSCAKGSNLGLALFRLEHIL-AGGPKVRLVVAGKGKVGGEEREEKQMVRAFLPPWWPTALDLATGKV 476
            R + QL G DA + +Q ++TND+  +T    ++   FL++KGRV+ + +V+ +A DA          F LD   EV E L++H + +KLR KV+I D T A +    +  L DE    L    K      +E+  L P        DPR    G H  G+RAIV     F               P E YE +        R   GV EG +LV+ +P ECNLDL H ++F KGCY+GQELTARTQ+KG IRKR++P                                           AL     +D +   S   F   A P      S   +SK          G  IV     K VG+I +  K  +  +A+ RL ++L +   +V +V + K       ++       + P WWP  LDL TGK+
Sbjct:   16 RRLTQLQGADASRFIQAVLTNDMTSVTRRGDAIYGGFLSSKGRVVGDCNVLQLADDA----------FLLDYDEEVAEPLMKHWKRYKLRMKVKIEDKTDAFSLYATLPALVDEEDAALTPSVKTL----DELQTLNPGDNSVVYADPR----GDH-FGVRAIVPTDETF-------------NVPEE-YETMDTSDYLDHRIALGVAEGKELVDGIPLECNLDLMHGVSFRKGCYVGQELTARTQFKGNIRKRLVPM------------------------------------------ALIPSDQTDVVKTLSELAFKTFAEPSHGALRSYLAASKEWKGVKAPEIGDKIVSTGGTKAVGTIFNVGKDVSCAIAMMRLGNLLPSESEEVEVVPSMKFST----QDGAFHAVPYQPSWWP-QLDLKTGKM 366          
The following BLAST results are available for this feature:
BLAST of NO05G04260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27992.14.400e-12353.75transferase caf17 mitochondrial-like protein [Nann... [more]
XP_005853492.15.100e-10363.17folate-binding protein, partial [Nannochloropsis g... [more]
CBN79247.11.500e-3030.23conserved unknown protein [Ectocarpus siliculosus][more]
XP_009526387.13.700e-2929.98hypothetical protein PHYSODRAFT_354565 [Phytophtho... [more]
XP_001634154.18.300e-2935.37predicted protein [Nematostella vectensis] >EDO420... [more]
ETI45475.17.000e-2837.74hypothetical protein F443_09969 [Phytophthora para... [more]
ETL91974.13.500e-2730.63hypothetical protein L917_09597 [Phytophthora para... [more]
GBG31292.13.500e-2730.53Aminomethyltransferase [Aurantiochytrium sp. FCC13... [more]
XP_024578384.14.500e-2734.02transferase caf17 mitochondrial-like [Plasmopara h... [more]
XP_008893036.15.900e-2730.63hypothetical protein PPTG_01474 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003433NSK003433Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04260.1NO05G04260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|401372gene_3239Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g73gene2585Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04260.1NO05G04260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04260 ID=NO05G04260|Name=NO05G04260|organism=Nannochloropsis oceanica|type=gene|length=1832bp
ATGCATTCTTCCACCTCTACGACAAGACGGAGAGTAGCTGCGTCCTGGCT
GCAGTGTGCCAGTGCGTCCGCCACAGCGGCTTCAATTTTACGGgtacgtg
gcactttcattcaccttgaaagaacccgtcgctccgtcgtcgtcccgtcc
aggtcttacacacttcagtctaaaatgcttgtcctgatagtatggtttct
ccttcgaacaagcccctgctcctcgaaagtaaaacactccctactaccct
ctgccccgcctctgcccacgagccatcatcttcatcttgtaatttatccc
cttaacacctccgtagGCACCTAAAACACCAAGACGGCTCAGCAGCAGCA
GCACAATCCCAACAAGATGGGACCCTCATGTCATGGCAACCAACAGATCA
GGCGGCATCTGGGAAGTGGACCTGACTCGCGGGGAGAGCAATGGCAAGCG
GTGCATCCTCCAACTGGCAGGGCCCGATGCTCCCAAGCTTGTGCAAGGTC
TAATCACGAACGACATTGTCCATTTGACCGAAGCAAAAGCATCGTTGGCA
GCGGCATTTTTGACGAATAAAGGACGGGTGATTACGGAGAGTGTCATAAC
CATTGCGACCGACGCCAAGGAAGCGCCGCATGGTGGCCCTGACAAATTCT
TCCTAGACCTTCCTGTGGAGGTTAAAGAAGGACTCCTCCGTCATTTGCGC
CTGTTCAAACTTCGTGCCAAAGTGCAGATAACTGATCTGACGGCCACGGC
GAGGGTGTGCGTGGTGCTGGGCTTGCCGGACGAGGTACTCGTGGATCTAG
ATGTGGTGAAGAAGCATTGGACAGGACGAGGAGAAGAGGTCCTGGGGCTC
GGACCCGACCCTCGGATTGCCTTGCCGGGACAACATCCTTTGGGCATTCG
TGCAATCGTTACACCCTCCCCTGCCTTTCCCTTTTTTTGCTCGCAGCAGC
AACAGCAGGAGCACCAGCAGCAGCCACGCGAAGTTTATGAGGCACTGCGT
TTTTTGCATGGGGTTGGGGAAGGGCCAGACTTGGTTGAACGGTTGCCTTC
GGAATGTAACCTCGATTTAACTCATGCCATTAATTTTCACAAAGGCTGCT
ACCTTGGGCAAGAGCTCACGGCCCGCACGCAGTATAAGGGCGTGATTCGG
AAGCGGGTGTTGCCTTTCTTCTTCCTTCCTTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCAGAAGCACTT
CCAGTCGGTTCCTTTTCTGATTTCCTCCCTTTTCCATCTGCTTGTCCTTT
CATGGCTTCCCCACTGATTCCCTGCAGTAGTAGCAGCAGCACCAGCAGTA
AAGGTGCGAATATTGTGGATGAAATTACGGGGAAGACTGTTGGGTCTATC
GTATCTTGTGCCAAAGGGAGCAATCTCGGCCTGGCACTTTTTCGACTTGA
GCATATACTGGCAGGCGGACCTAAGGTGCGTTTGGTGGTGGCTGGGAAGG
GGAAGGTCGGAGGGGAGGAGAGAGAGGAGAAGCAGATGGTGAGGGCGTTT
TTGCCGCCGTGGTGGCCGACGGCATTGGATTTAGCAACGGGGAAGGTGCG
GGCCTGAAATTCGAGGTGGAGGTGGAGGTGGAGGAGAGAGCAGAAAAAGA
GGTGGAGATAAGGAGGAGGAAGAGGGAGAGGAAGAGGAAGAGGTGGCAAG
GCAATGGACTGTTTGAAATGCATGCGATTCTGATGTTGAAGGACAAGTAA
ATAAAGACAATAGAACGATTTTGGATTTACAT
back to top

protein sequence of NO05G04260.1

>NO05G04260.1-protein ID=NO05G04260.1-protein|Name=NO05G04260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=478bp
MHSSTSTTRRRVAASWLQCASASATAASILRAPKTPRRLSSSSTIPTRWD
PHVMATNRSGGIWEVDLTRGESNGKRCILQLAGPDAPKLVQGLITNDIVH
LTEAKASLAAAFLTNKGRVITESVITIATDAKEAPHGGPDKFFLDLPVEV
KEGLLRHLRLFKLRAKVQITDLTATARVCVVLGLPDEVLVDLDVVKKHWT
GRGEEVLGLGPDPRIALPGQHPLGIRAIVTPSPAFPFFCSQQQQQEHQQQ
PREVYEALRFLHGVGEGPDLVERLPSECNLDLTHAINFHKGCYLGQELTA
RTQYKGVIRKRVLPFFFLPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSEALPVGSFSDFLPFPSACPFMASPLIPCSSSSSTSSKGANIVDE
ITGKTVGSIVSCAKGSNLGLALFRLEHILAGGPKVRLVVAGKGKVGGEER
EEKQMVRAFLPPWWPTALDLATGKVRA*
back to top
Synonyms
Publications