NO05G04090, NO05G04090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04090 vs. NCBI_GenBank
Match: EWM27987.1 (Protein of unknown function DUF2930 [Nannochloropsis gaditana]) HSP 1 Score: 349.0 bits (894), Expect = 1.400e-92 Identity = 183/285 (64.21%), Postives = 220/285 (77.19%), Query Frame = 0 Query: 11 ITLLLVTLAAVATAFVPSRCVTPLSPPLPCGPSSSV---------VLQASNN---GGLEGVFKFIRSDALSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIMSEVG---DELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSLSE 281 I ++++ + AFVPS C + + + +L A N G +E VFKFIRSDALSL VGSL LLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADV++LQGP +D++ + LTPRQ T+LRWAA TYL+AFP PSVLIWHK +T+LR GIM++ ++ VLAIV +AL+ P+ DGL QPTYIPDLQVLPGK+EFM YLP++CQAVVLQPFD+N+GLI+LGGNKRRDLTPKDLA+ARV+AQKVQ+ L+E Sbjct: 46 IAVIVLGKLGLNAAFVPSACSNIHKASISSHMTQQLTYRSIAFETILMAEGNSQVGSMESVFKFIRSDALSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
BLAST of NO05G04090 vs. NCBI_GenBank
Match: CBJ30210.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.1 bits (357), Expect = 2.600e-30 Identity = 88/213 (41.31%), Postives = 125/213 (58.69%), Query Frame = 0 Query: 68 LSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIMSEVGDELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSLSE 281 +SLGVG LLA++ NR+ T L DSQ+RTDILGV ++GGL+ NG+ L D+ V+EA+ + L G + E A D L P L+W ++ L P T S+L++ KT+ R G+M E D + I+ K ++ RDG Q Y+ LQ LPGKVEF YLP CQAV++ P ++V+G N+ R TPKD+ + + + SL E Sbjct: 85 VSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADD--LAPGARRDLQWLGESLLLVSPAT-SMLVYQDGKTLARVGVMGESAD-IRDAPILRKCIS--EGRDGREQ--YLAALQTLPGKVEF-DYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSLRE 288
BLAST of NO05G04090 vs. NCBI_GenBank
Match: WP_106289746.1 (cofactor assembly of complex C subunit B [Merismopedia glauca] >PSB01815.1 cofactor assembly of complex C subunit B [Merismopedia glauca CCAP 1448/3]) HSP 1 Score: 121.3 bits (303), Expect = 4.700e-24 Identity = 79/211 (37.44%), Postives = 117/211 (55.45%), Query Frame = 0 Query: 68 LSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIMSEVGDELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSL 279 L + G L L L+ NRL+T L DSQ+R+D+LGV +G L+L+GL Q T R + +EL G + E+AP+ L L WA+ L T SV++W++ +TILR+G++ E D + AIV + L +P Y+ DL+V PG++EF YLP Q + QP NKG+++LG R T +D A +A K+ +L Sbjct: 12 LPIVAGILGSLLLIVNRLFTPELTDSQARSDVLGVILSGVLVLSGLLWQQYTPRSPEAVELIGQQGLELAPE--LPETLKNELAWASHLLL-TNTVTRSVVVWYQGQTILRRGVLGE-KDRVTPGAIVERVLK-------TQKPVYLVDLKVYPGRIEF-DYLPENTQGAICQPL-GNKGVLILGAYAPRSYTKQDEAWIEGIADKLADTL 209
BLAST of NO05G04090 vs. NCBI_GenBank
Match: WP_068815809.1 (cofactor assembly of complex C subunit B [Phormidesmis priestleyi]) HSP 1 Score: 114.8 bits (286), Expect = 4.400e-22 Identity = 77/213 (36.15%), Postives = 115/213 (53.99%), Query Frame = 0 Query: 68 LSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIMSEVGDELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSLSE 281 L + VGS+A + L TNR T L DSQ+R+D LGV + L+L GL Q + R + +EL G + E+APD L T L W + L T S+++WH+ K +LR+GI+S E++ AI+ + L QP Y+ L + PG+ EF YLP Q V+ QP +G ++LG N R T +D +A+K+ ++LS+ Sbjct: 13 LPIVVGSIAGILLFTNRFLTSSLTDSQARSDALGVILSALLILTGLLWQRVQSRTPESVELVGEQGFELAPD--LPDAVKTELAWMSHLLL-TNTVTKSIVVWHRGKVLLRRGILSP-NTEVKPGAILQRVL-------DKHQPIYLVALAIYPGRFEF-DYLPENTQGVICQPI-GAEGALILGANAPRSYTKQDENWVAAIAEKLDNTLSQ 212
BLAST of NO05G04090 vs. NCBI_GenBank
Match: WP_016872552.1 (cofactor assembly of complex C subunit B [Chlorogloeopsis fritschii]) HSP 1 Score: 114.0 bits (284), Expect = 7.500e-22 Identity = 77/213 (36.15%), Postives = 115/213 (53.99%), Query Frame = 0 Query: 68 LSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIMSEVGDELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSLSE 281 L + VG L + L+ NRL T + DSQ+R D+LGV + L+L GL Q + R D +EL G +APD L R T L WA+ L T S++++++ K +LR+GI+S E++ I+ + L QP Y+ DL+V PG++EF YLP Q V+ QP N+G ++LG N R T +D +A K+ +L+E Sbjct: 13 LPIFVGGLGAVLLLVNRLLTPQITDSQARADVLGVILSAVLILIGLIWQQVQPRSPDAVELVGEEGFVLAPD--LPDRVKTELAWASHLLL-TNTVTRSLVVFYQGKVLLRRGILS-TKSEVKPGVILKRVLEK-------QQPVYLVDLKVYPGRIEF-DYLPENTQGVICQPI-GNQGALILGANAPRSYTKQDENWIAGIADKLAVTLNE 212
BLAST of NO05G04090 vs. NCBI_GenBank
Match: WP_011610731.1 (cofactor assembly of complex C subunit B [Trichodesmium erythraeum] >ABG50343.1 conserved hypothetical protein [Trichodesmium erythraeum IMS101]) HSP 1 Score: 114.0 bits (284), Expect = 7.500e-22 Identity = 75/213 (35.21%), Postives = 115/213 (53.99%), Query Frame = 0 Query: 68 LSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIMSEVGDELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSLSE 281 L + G L L+TNR +T L SQ+R+D++GV + L+L GL Q I R D ++L G E+ P+ L+ T L WA+ + L T +V+IWH+ K +LR+GI+ ++ I+ + L G +P Y+ DL+V PG++EF YLP Q V+ QP NN G+++LG N R T +D +A K+ +LS+ Sbjct: 13 LPIIAGGLGATLLMTNRFFTPNLLASQTRSDVVGVILSAFLILTGLLWQQIQPRSPDTVKLIGKSEFELLPE--LSEIVKTELAWAS-SLLLTNTVTKTVIIWHQEKVLLRRGILPS-ESYIKPGTILKQVL-------GKQKPIYLVDLKVYPGRIEF-NYLPENTQGVICQPLGNN-GVMILGANAPRSYTKQDENWISGIADKLTDTLSK 212
BLAST of NO05G04090 vs. NCBI_GenBank
Match: WP_015164308.1 (cofactor assembly of complex C subunit B [Pseudanabaena sp. PCC 7367] >AFY69335.1 hypothetical protein Pse7367_1037 [Pseudanabaena sp. PCC 7367]) HSP 1 Score: 112.8 bits (281), Expect = 1.700e-21 Identity = 78/220 (35.45%), Postives = 118/220 (53.64%), Query Frame = 0 Query: 68 LSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIM-------SEVGDELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSLSE 281 L L VG + AL NRL T L +SQSR+D +G+ + L+L L Q + + + ++L G + EI P LTP Q L WA+ T L T S++IW+ ++ +LR+GIM S+ ++E AI+ ++L +PTY+ L + PG++EF YLP Q V++QP D +G I+LG N R T +D +A K+ SLS+ Sbjct: 5 LPLIVGIIGGTALFINRLLTPMLTESQSRSDAMGILESAILILIALLWQQVQPKPPESVQLVGAEVFEIDPS--LTPNQQAELAWASHTLL-TNTITKSIVIWYDDRILLRRGIMPKQDQSKSKNESKIEPGAILARSLK-------TQKPTYLVKLALYPGRLEF-DYLPENTQGVIVQPID-ERGAIILGANAPRSYTKQDENWIAAIAAKLAYSLSD 212
BLAST of NO05G04090 vs. NCBI_GenBank
Match: CEM04109.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 70/220 (31.82%), Postives = 114/220 (51.82%), Query Frame = 0 Query: 62 FIRSDALSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLI------WHKNKTILRKGIMSEVGDELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPF---DNNKGLIVLGGNKRRDLTPKDLAKARVVAQ 273 F +S+ +GS LLA++ NRL + SQ R D+L ++ GL+L G+ L+DIT +EAD +EL + A +Q +LRWA+++ L+ P V+ + +LR G M + +++ + A + G+S + DL+ LPG+VE + YLP+ +VV+QPF D G++V G N+ R +T + LA VA+ Sbjct: 17 FFVQPKVSIAIGSFCLLAILINRLIDITAYASQGRADLLATLASAGLVLIGVALEDITAKEADRVELDAANLIRQAEATAADEQQEGLLRWASESLLRGTPYRSVVVFIADDSDLSRASIVLRHGYMGQDLSSVDLTSSPILRSAFSSAKAGISDAVCLQDLKFLPGRVE-LTYLPSNVPSVVMQPFTTSDGRPGVVVCGTNRPRSVTARHLAWTGNVAK 235
BLAST of NO05G04090 vs. NCBI_GenBank
Match: WP_026720458.1 (cofactor assembly of complex C subunit B [Fischerella sp. PCC 9431]) HSP 1 Score: 111.7 bits (278), Expect = 3.700e-21 Identity = 78/213 (36.62%), Postives = 114/213 (53.52%), Query Frame = 0 Query: 68 LSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIMSEVGDELEVLAIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSLSE 281 L + VG L + L+TNRL T + +SQ+R D+LGV +G L+L GL Q I R DV+EL G +APD L T L WA+ L T S++++++ K +LR+GI+ E+ I+ + L QP Y+ L+V PGK+EF YLP Q V+ QP +G+++LG N R T +D +A K+ +LSE Sbjct: 13 LPIVVGGLGAVLLLTNRLLTPEITESQARADVLGVILSGVLILTGLLWQQIQPRSPDVVELIGEEGFVLAPD--LPQTIKTELAWASHLLL-TNTVTRSLVVFYQGKVLLRRGILG-TKSEVTPGPILKRVLEK-------QQPVYLVALKVYPGKIEF-DYLPENTQGVICQPI-GKEGVLILGANAPRSYTKQDENWIAGIADKLAVTLSE 212
BLAST of NO05G04090 vs. NCBI_GenBank
Match: WP_015148113.1 (cofactor assembly of complex C subunit B [Oscillatoria acuminata] >AFY81469.1 Protein of unknown function (DUF2930) [Oscillatoria acuminata PCC 6304]) HSP 1 Score: 110.2 bits (274), Expect = 1.100e-20 Identity = 75/214 (35.05%), Postives = 117/214 (54.67%), Query Frame = 0 Query: 68 LSLGVGSLALLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVIELQGPRIDEIAPDNLLTPRQATVLRWAADTYLQAFPNTPSVLIWHKNKTILRKGIMSEVGDELEVL--AIVHKALAMPPDRDGLSQPTYIPDLQVLPGKVEFMRYLPALCQAVVLQPFDNNKGLIVLGGNKRRDLTPKDLAKARVVAQKVQSSLS 280 L L G L + NR+ + L DSQ+R+D+LGV + L+L GL Q + + + +EL G E+APD L R T L WA+ L+ T S+++W+ + +LR+GI+ G E EV AIV +A+A +P Y+ L++ PG++EF YLP Q V+ QP ++G+++LG N R T +D +A+K+ +LS Sbjct: 13 LPLVAGGLGGVLFFVNRVLSVELTDSQARSDVLGVILSALLILTGLLWQQVQPKAPESVELIGEEGFELAPD--LPERSKTELAWASVMLLRN-TVTRSLVVWYDGRVLLRRGIL---GPEREVKPGAIVQRAIAQ-------QKPVYLVALKLYPGRIEF-DYLPENTQGVICQPL-GSRGVLILGANAPRSYTKQDERWIEGIAEKIAENLS 211 The following BLAST results are available for this feature:
BLAST of NO05G04090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04090 ID=NO05G04090|Name=NO05G04090|organism=Nannochloropsis oceanica|type=gene|length=1121bpback to top protein sequence of NO05G04090.1 >NO05G04090.1-protein ID=NO05G04090.1-protein|Name=NO05G04090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=281bpback to top Synonyms
Publications
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