NO05G03610, NO05G03610 (gene) Nannochloropsis oceanica

Overview
NameNO05G03610
Unique NameNO05G03610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1641
Alignment locationchr5:953197..954837 +

Link to JBrowse

Properties
Property NameValue
DescriptionDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:953197..954837 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036625E3-bd_dom_sf
IPR011053Single_hybrid_motif
IPR0010782-oxoacid_DH_actylTfrase
IPR004167E3-bd
IPR000089Biotin_lipoyl
Homology
BLAST of NO05G03610 vs. NCBI_GenBank
Match: EWM27998.1 (dihydrolipoamide s-acetyltransferase (e2 component of pyruvate dehydrogenase complex) [Nannochloropsis gaditana])

HSP 1 Score: 613.6 bits (1581), Expect = 5.900e-172
Identity = 384/562 (68.33%), Postives = 440/562 (78.29%), Query Frame = 0
Query:    3 SWLGRSRRVVSVCL-ASGSRSSSTSTSSTLGKSTIITRRFPGTAACAVALRVIESRRCSSSSVLGTSTPRRIGSEFFAP------SLRRMFSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVT-APIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNK--GE-EGSLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGE-------EVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            +WLG+SRRVV +CL  +G R+ +  + S+LG+   +    P   A  V      S  C   S   ++ P+      F P      S +R+FSSLP HQVVG+P+LSPTME GTIASW KKEG+SFGPGDV+CE+ETDKAVVSFDAQDEG+LAKIL+Q  +GEV+VGQPIMV V+DA +VAAFA+++PDA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+SLLG+PGRVFASPLAKTLA ++GHDLRAIPGTGPNGRV+AADVREYVP V ++                        V  API G  FTDY +SEA + VAA+L +AKQTVPHYYLTVDL+L KLL LRETLNK  GE E  LSVNDFLLKAAALASKKVPEANASWHG+FVRQYHAVD+NL++GVGDGLLAPV+RNVD+KGLRALS EVAGLV GAERGELS EALQ+GTFTL+NVGMYGVK+VAPIV+LPQ+CVLGVGAIENRVVPA  P +GE       EVY VVPGVTVTLSCDHRVIDGAVGAQWL+AFKSLVE+P+TLLL
Sbjct:    2 TWLGKSRRVVHLCLFPNGLRAGTGKSRSSLGR---LLEHGP-LPASPVFPHGRRSISCGKRSNRISTFPQVSRLACFQPGAAPLSSPQRLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAA-----EPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: XP_005853650.1 (pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [Nannochloropsis gaditana CCMP526] >EKU22708.1 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 572.4 bits (1474), Expect = 1.500e-159
Identity = 343/454 (75.55%), Postives = 382/454 (84.14%), Query Frame = 0
Query:  104 MEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVT-APIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNK--GE-EGSLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGE-------EVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            ME GTIASW KKEG+SFGPGDV+CE+ETDKAVVSFDAQDEG+LAKIL+Q  +GEV+VGQPIMV V+DA +VAAFA+++PDA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+SLLG+PGRVFASPLAKTLA ++GHDLRAIPGTGPNGRV+AADVREYVP V ++                        V  API G  FTDY +SEA + VAA+L +AKQTVPHYYLTVDL+L KLL LRETLNK  GE E  LSVNDFLLKAAALASKKVPEANASWHG+FVRQYHAVD+NL++GVGDGLLAPV+RNVD+KGLRALS EVAGLV GAERGELS EALQ+GTFTL+NVGMYGVK+VAPIV+LPQ+CVLGVGAIENRVVPA  P +GE       EVY VVPGVTVTLSCDHRVIDGAVGAQWL+AFKSLVE+P+TLLL
Sbjct:    1 MEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAA-----EPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 449          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: XP_002177160.1 (dihydrolipoamide acetyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >EEC51623.1 dihydrolipoamide acetyltransferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 406.8 bits (1044), Expect = 1.100e-109
Identity = 253/502 (50.40%), Postives = 322/502 (64.14%), Query Frame = 0
Query:   47 CAVALRVIESRRCSSSSVLGTSTPRRIGSEFFAPSLRRMFSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNK--GEEGSLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            C     +   R  + S+ +G ST R    E       R FSS P H++VG+PSLSPTME+G+IA+W  KEGESF  GD+ C VETDKA V F+AQD+GVLAKIL QAG  E+K G PIM+ ++D   + AFADYT D+          XXXXXXXXXXXXXXXXXXXXXXXX          G        R+ ASPLA  LA+EMG+++  IPGTGPNGR++AADV+EY P                            +   P+ G  +TDYPLSE+++ VAA+LA AK+ VPHYYLTVD+ + +LL++R TLN    E  +L V + LLKAAAL+ K VP ANASW    VR Y +VDIN++VG GD L+ PV++N  +KGL+A+S E+   V   E  +  +     GTFT++N+GMYGVKS API+  PQ+C L +GA+E R+VP  DP + E++Y      T TLSCDHRV+DGAVGAQWL AFKS V++P TLLL
Sbjct:    7 CQRTWLLASKRPAAWSNSVGRSTGRAPSLELLGGYPVRFFSSYPPHELVGLPSLSPTMESGSIAAWNLKEGESFIAGDIFCSVETDKATVDFEAQDDGVLAKILAQAGPDEIKCGDPIMITIEDEAHLGAFADYTLDSGTESSPPVADXXXXXXXXXXXXXXXXXXXXXXXXGTTSATSPDTG-------DRIVASPLAHMLAKEMGYNISKIPGTGPNGRIIAADVKEYTPGAVED-------ADTVDTPAPAQAAMKSSPAQPVSGSGYTDYPLSESAREVAARLAQAKRNVPHYYLTVDIAVDELLKIRSTLNATLDESAALGVYELLLKAAALSMKAVPSANASWMDSVVRVYDSVDINVVVGSGDSLVTPVIQNCSSKGLKAISEELGSAVKALEEDD-DAPIGGLGTFTVMNLGMYGVKSCAPIIREPQACALAIGALETRIVPNDDP-DAEDIYKESVMFTATLSCDHRVVDGAVGAQWLQAFKSHVQNPTTLLL 492          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: GAX15569.1 (pyruvate dehydrogenase E2 component [Fistulifera solaris])

HSP 1 Score: 397.9 bits (1021), Expect = 5.100e-107
Identity = 268/467 (57.39%), Postives = 335/467 (71.73%), Query Frame = 0
Query:   82 LRRMFSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNKGEEGSLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSSEALQS--GTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            L R FSSLPSH VVG+PSLSPTME+G+IASW  KEG+SF  GDV C VETDKA V F+AQD+GVLAKIL+QAG G++KVG+PIMV VD A DVAAF  ++ D      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          +  R+ ASP A  +A+E+G+DL AIPGTGP GR++AADV E+VP+ A             XXXXXXXXXX         G  FTDYPLS+ASK VAA+LA +K+ VPHYYLTVD+   +LL+LR++L   E G   V + L+KAAAL+ + VP  NA+W G+FVR Y AVD+N++VG GD L  PV+R+V  +GL+A++ E+A  V+  +    +   L +  GTFT +N+GMYG+K+ API+  PQ+C L VGA+E R+VP+ DP   + +Y     +T TLSCDHRV+DGAVGAQWL AFK  +E+P+TLLL
Sbjct:   27 LLRPFSSLPSHHVVGLPSLSPTMESGSIASWNLKEGDSFAAGDVFCSVETDKATVDFEAQDDGVLAKILVQAGGGDIKVGEPIMVTVDSADDVAAFQTFSLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--------ANGDRIVASPKAYKVAKELGYDLAAIPGTGPGGRILAADVHEFVPSAAVAAVTAPPTEAPGXXXXXXXXXXL--------GDGFTDYPLSDASKEVAARLAQSKRNVPHYYLTVDINCDELLKLRDSLGMPEIG---VYELLIKAAALSMQAVPTVNAAWMGDFVRVYDAVDMNVVVGSGDELYTPVLRDVGRRGLKAIAKELATAVSALDPNAEAIAPLTNGVGTFTFLNLGMYGIKACAPIIREPQACALAVGALETRIVPSNDP---DTIYQESEVLTATLSCDHRVVDGAVGAQWLAAFKGHIENPVTLLL 471          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: OQS03645.1 (dihydrolipoamide acetyltransferase [Thraustotheca clavata])

HSP 1 Score: 377.9 bits (969), Expect = 5.400e-101
Identity = 226/471 (47.98%), Postives = 288/471 (61.15%), Query Frame = 0
Query:   84 RMFSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDA----TPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNK--GEEGSLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGA--ERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            R  SSLPSH+VVG+P+LSPTME GTI++W KKEG+    GDV+C+VETDKAVV F+AQD+  LAKIL  AGS ++KVG+PI V VDD   VA   ++T DA    TPA         XXXXXXXXX                                R+ ASPLAK +A E G  L  + G+GP GR++ ADV E +  V SQ                          API   DFTD+PLS  ++A AA+L   K  VPHY+LT+D+ L KLL  R+ LNK  GE   LSVNDF+L+AAAL  KKVP AN++W G FVRQ+H  +I++M+ V  G++APV+R ++ KGL  ++ +V  LV     E  +LS    + GTFT+ NVGMY VKS+A IV+  Q+C LG+G I  RVVP  DP E  ++Y     +T TL+CDHRVIDGA GAQWL++FK LVEDPL ++L
Sbjct:  141 RSMSSLPSHEVVGLPALSPTMEMGTISAWLKKEGDKINAGDVICQVETDKAVVDFEAQDDSYLAKILKPAGSADIKVGEPIFVTVDDQDSVAQLVNFTFDASATSTPATAPSTPVEQXXXXXXXXXHVATPVAAATSTI-----------------SDRIVASPLAKKIARESGVQLAGVSGSGPLGRIIRADVEEALTRVQSQPAAAQAVEPVAAAQGL--------APAPIVHGDFTDFPLSAKAQAFAAQLTQQKLDVPHYHLTIDVTLDKLLSARDLLNKTRGENDQLSVNDFILRAAALTMKKVPAANSAWMGTFVRQFHNCNISMMMSVEGGVVAPVLREINLKGLDGVNADVRALVEKVQNENSDLSDNDFEGGTFTISNVGMYDVKSLAAIVSPNQACSLGLGVISKRVVPNDDP-EATQIYKYATQMTATLACDHRVIDGATGAQWLSSFKELVEDPLRMIL 585          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: XP_002287343.1 (dihydrolipoamide s-acetyltransferase [Thalassiosira pseudonana CCMP1335] >EED94786.1 dihydrolipoamide s-acetyltransferase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 367.9 bits (943), Expect = 5.600e-98
Identity = 273/526 (51.90%), Postives = 351/526 (66.73%), Query Frame = 0
Query:   34 STIITRRFPGTAACAVALRVIESRRCSSSSVLGTSTPRRIGSEFFAPSLRRMFSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGH---DLRAIPGTGPNGRVVAADVREYVPAVA------SQXXXXXXXXXXXXXXXXXXXXXXXNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNKG-EEGSLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVA---GLVAGAERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            +T + R      AC    R + S   ++   L TS      +     +  R F+S PSH+VVGMP+LSPTME+GTI+ W  K G+SF  GD L  +ETDKA + F+AQD+GV+AKIL   G GE+ VG PI+V V++  DVAAFAD++P++     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  R+ ASP A TLA+E G+       I G+GP GR++A D+ EY P+ A      + XXXXXXXXXXXXXXXXXXXXXXX +  P+ G+ +TDY L  ++  +A++L  +KQ VPHYYLT+DL L  L+ELR +LN   ++G ++VND LLKAAA A K VP ANASW G+FVR Y +VD+N++VG G  L APV+R+V  +GL A+S + A    +V G E     +     GTFT+VN+GM+GVKS API+  PQ+C L +G IENR+VP  D  E EE+Y     +T TLSCDHRV+DGAVGAQWL+AFK+ VE+P+TLLL
Sbjct:    2 ATSLARTLLSRGACR---RSLPSSAAANLFGLNTSYCSAASTSPIIDNYPRWFASYPSHEVVGMPALSPTMESGTISKWNIKNGDSFSAGDSLAVIETDKATIDFEAQDDGVVAKILAPEGGGEIIVGHPILVTVEEESDVAAFADFSPESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGE---------------RIVASPRAHTLAKERGYGEISALRIVGSGPGGRIIAQDILEYDPSSAPAAVSVAXXXXXXXXXXXXXXXXXXXXXXXXXLPQPVQGQGYTDYSLPTSALELASRLHTSKQNVPHYYLTIDLNLDSLVELRSSLNSTMKDGGITVNDLLLKAAAAAMKTVPAANASWMGDFVRVYDSVDVNVVVGNGSALYAPVIRDVGRRGLAAVSDDFAAATSVVEGEEDTTTVAGFGDVGTFTMVNLGMFGVKSCAPIIREPQACALALGVIENRIVPN-DDAESEEIYKEAVMMTATLSCDHRVVDGAVGAQWLSAFKNHVENPVTLLL 508          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: XP_023987087.1 (dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [Physeter catodon])

HSP 1 Score: 367.1 bits (941), Expect = 9.600e-98
Identity = 227/477 (47.59%), Postives = 299/477 (62.68%), Query Frame = 0
Query:   81 SLRRMFSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPD---------ATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNKGEEG--SLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            S RR + SLP HQ V +PSLSPTM+AGTIA W KKEGE    GD+L E+ETDKA + F+AQ+EG LAKILI  G+ +V +G P+ +IV+   D+ AFADY P          A P P   XXXXXXXXXXXXXXXXXXXXXXXX                     GR+F SPLAK LA E G DL  + GTGP+GR++  DV  +VP  A+                           AP+P   FTD P+S   + +A +L  +KQT+PHYYL+VD+ +G++L +R+ LNK  EG   +SVNDF++KA+ALA  KVPEAN+SW    +RQ H VDI++ V    GL+ P+V N   KGL  ++ +V  L   A  G+L     Q GTFT+ N+GM+G+K+ + I+N PQ+C+L +GA E+R+VPA    + E+ + V   ++VTLSCDHRV+DGAVGAQWL  F+  +E P+T+LL
Sbjct:   80 SPRRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKINEGDLLAEIETDKATIGFEAQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAAPPTPSPAXXXXXXXXXXXXXXXXXXXXXXXXP-------------------KGRLFVSPLAKKLATEKGIDLTQVKGTGPDGRIIKKDVDSFVPTKAAPTPAAAVSPPSPG-------------VAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIASDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDRLVPA----DNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 520          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: XP_006733352.1 (PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X2 [Leptonychotes weddellii])

HSP 1 Score: 365.9 bits (938), Expect = 2.100e-97
Identity = 226/490 (46.12%), Postives = 300/490 (61.22%), Query Frame = 0
Query:   59 CSSSSVLGTSTPRRIGSEFFAPSLRRMFSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNKGEEG--SLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            C  S     +   R+  +    S RR + SLP HQ V +PSLSPTM+AGTIA W KKEGE    GD+L E+ETDKA + F+ Q+EG LAKILI  G+ +V +G P+ +IV+  +D+ AFADY P                        XXXXXXXXXXXXXXXXXXXXXX        GRVFASPLAK LA E G DL  + GTGP GR++  D+  +VP  A                            APIP   FTD P+S   + +A +L  +KQT+PHYYL++D+ +G++L +R+ LNK  EG   +SVNDF++KA+ALA  KVPEAN+SW    +RQ H VDI++ V    GL+ P+V N   KGL A++ +V  L   A  G+L     Q GTFT+ N+GM+G+K+ + I+N PQ+C+L +GA E+R+VPA    + E+ + V   ++VTLSCDHRV+DGAVGAQWL  F+  +E P+T+LL
Sbjct:   59 CGWSPSSWATQRNRLLLQLLGSSSRRCY-SLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKINEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEEDIPAFADYRPTEV----------TDLKPQAPPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRVFASPLAKKLAAEKGIDLTYVKGTGPEGRIIKKDIDSFVPTKAVPAPAAAVPAVGPG-------------VAPIPAGVFTDVPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLEAIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDRLVPA----DNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 520          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: XP_024582546.1 (pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Plasmopara halstedii] >CEG46177.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Plasmopara halstedii])

HSP 1 Score: 364.4 bits (934), Expect = 6.200e-97
Identity = 227/464 (48.92%), Postives = 296/464 (63.79%), Query Frame = 0
Query:   86 FSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLN--KGEEGSLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMV-GVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            F SLP H+VVG+P+LSPTME GTIA W K+EG+    GDV+CEVETDKAVV ++A D+  LAKIL+ AGSGE+ VG+PI V V + KDVAAF D++ D++             XXXXXXXXXXXXXXXXXXXXXX                 RVFASPLA+ +A E G  L  I G+GPNGR+V ADV   + A +S                          T P    +++DYP+SE S+ +A +    K  VPHY+L+  L L KLL+ R  LN  +G +  LSVNDF+++AA+LA +KVP+AN+SW G F+RQY  V++NLMV     G++APV+  V+ KGL A+  E   ++A A+ G +  + L  GTFT+ NVG + V+S+A IV   Q+C+LG+G IE +VVP  DP   E++Y     +T TL+CDHRVIDGAVGAQWL  FK LVEDPL ++L
Sbjct:   39 FGSLPDHEVVGLPALSPTMEMGTIAKWNKQEGDPISAGDVVCEVETDKAVVDYEATDDSYLAKILVPAGSGEIAVGKPIFVTVLEEKDVAAFKDFSTDSSAIEAASVAPPVEVXXXXXXXXXXXXXXXXXXXXXXG---------------DRVFASPLARKIARESGAVLSVINGSGPNGRIVKADVEAALAAKSSN-------------SFDKVEATSTGATIPTTATNYSDYPVSEESQTIAQQFTQQKLEVPHYHLSTSLVLDKLLDARARLNAGRGPDEQLSVNDFIVRAASLAMRKVPDANSSWKGSFIRQYKDVNVNLMVSSFSGGVVAPVLTQVNRKGLDAICQETQKVIAKAKDGNIEPDDLAIGTFTIANVGQFDVQSMAGIVRPEQACLLGLGTIEKKVVPNDDP-NAEQIYKYAQVMTATLACDHRVIDGAVGAQWLATFKELVEDPLKMIL 473          
BLAST of NO05G03610 vs. NCBI_GenBank
Match: PNI40705.1 (DLAT isoform 3, partial [Pan troglodytes])

HSP 1 Score: 361.3 bits (926), Expect = 5.300e-96
Identity = 213/465 (45.81%), Postives = 292/465 (62.80%), Query Frame = 0
Query:   84 RMFSSLPSHQVVGMPSLSPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKILIQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLLGHPGRVFASPLAKTLAEEMGHDLRAIPGTGPNGRVVAADVREYVPAVASQXXXXXXXXXXXXXXXXXXXXXXXNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQLGKLLELRETLNKGEEG--SLSVNDFLLKAAALASKKVPEANASWHGEFVRQYHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSSEALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPREGEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL 547
            R + SLP HQ V +PSLSPTM+AGTIA W KKEG+    GD+L E+ETDKA + F+ Q+EG LAKIL+  G+ +V +G P+ +IV+   D++AFADY P                         XXXXXXXXXXXXXXXXXXXXX     G  GRVF SPLAK LA E G DL  + GTGP+GR+   D+  +VP+  +                           AP+P   FTD P+S   + +A +L  +KQT+PHYYL++D+ +G++L +R+ LNK  EG   +SVNDF++KA+ALA  KVPEAN+SW    +RQ H VD+++ V    GL+ P+V N   KG+  ++ +V  L A A  G+L     Q GTFT+ N+GM+G+K+ + I+N PQ+C+L +GA E+++VPA    + E+ + V   ++VTLSCDHRV+DGAVGAQWL  F+  +E P+T+LL
Sbjct:   42 RRYYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKEADISAFADYRPTEV----------TDLKPQAPPPTPXXXXXXXXXXXXXXXXXXXXXXXXXXGPKGRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDIDSFVPSKVAPAPAAVVPPTGPG-------------MAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLAAKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPA----DNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 479          
The following BLAST results are available for this feature:
BLAST of NO05G03610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27998.15.900e-17268.33dihydrolipoamide s-acetyltransferase (e2 component... [more]
XP_005853650.11.500e-15975.55pyruvate dehydrogenase E2 component (dihydrolipoam... [more]
XP_002177160.11.100e-10950.40dihydrolipoamide acetyltransferase [Phaeodactylum ... [more]
GAX15569.15.100e-10757.39pyruvate dehydrogenase E2 component [Fistulifera s... [more]
OQS03645.15.400e-10147.98dihydrolipoamide acetyltransferase [Thraustotheca ... [more]
XP_002287343.15.600e-9851.90dihydrolipoamide s-acetyltransferase [Thalassiosir... [more]
XP_023987087.19.600e-9847.59dihydrolipoyllysine-residue acetyltransferase comp... [more]
XP_006733352.12.100e-9746.12PREDICTED: dihydrolipoyllysine-residue acetyltrans... [more]
XP_024582546.16.200e-9748.92pyruvate dehydrogenase complex dihydrolipoamide ac... [more]
PNI40705.15.300e-9645.81DLAT isoform 3, partial [Pan troglodytes][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003499NSK003499Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03610.1NO05G03610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584807gene_3169Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g2gene2523Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03610.1NO05G03610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03610 ID=NO05G03610|Name=NO05G03610|organism=Nannochloropsis oceanica|type=gene|length=1641bp
ATGACGTCGTGGTTGGGAAGAAGCCGCCGGGTTGTCTCCGTGTGCTTGGC
GTCCGGTAGCCGGTCCAGCAGCACCAGCACCAGCTCCACTCTCGGCAAGA
GCACTATCATCACCCGACGCTTCCCCGGCACGGCCGCCTGTGCGGTGGCC
CTGCGCGTGATCGAGAGTAGAAGATGCAGCAGCAGTTCTGTCCTTGGCAC
GAGCACCCCCAGAAGGATTGGTAGCGAATTTTTCGCTCCCTCCTTGCGCC
GGATGTTTAGCTCCTTGCCGTCGCATCAGGTGGTGGGGATGCCCTCGCTG
TCGCCCACCATGGAGGCTGGCACCATCGCCTCGTGGGCCAAGAAGGAAGG
GGAAAGCTTCGGGCCGGGGGACGTGCTGTGCGAAGTTGAGACGGATAAGG
CAGTCGTGTCATTTGATGCACAAGACGAAGGAGTTCTAGCCAAGATTCTG
ATACAGGCGGGTAGTGGCGAGGTCAAGGTCGGGCAACCCATTATGGTCAT
TGTCGACGACGCAAAGGACGTGGCCGCCTTTGCCGACTACACTCCCGACG
CTACACCTGCCCCTGGCGCGCCTGCCAAGACCACGACACCTGCCGCTCCG
GCCGCTCCTGCGGCCACGGCTTCCTCCCCTCCTTTTCCTCCTCCTCCTCC
CACTTCCAGTTCCCCACCTGCCTCGGCTGCGGCGGGGATCTCCTTGCTAG
GGCATCCCGGCCGAGTATTTGCCAGCCCGCTTGCCAAGACGCTGGCAGAG
GAGATGGGCCATGATTTGAGGGCGATTCCGGGCACGGGGCCGAATGGTCG
AGTGGTTGCCGCGGACGTACGGGAATATGTCCCCGCTGTCGCCAGTCAGT
CAACAGCTGTGGCTGCAGCTCCTGCTCCTTCTGCTACTCCCGCTGCGGCT
GCCGCTGCGTCAGTGATGAATGTGACGGCACCGATACCAGGGAAGGACTT
CACAGATTATCCGCTGTCGGAGGCCAGCAAAGCGGTGGCTGCAAAGCTGG
CGATGGCGAAGCAGACGGTTCCTCATTATTATTTAACTGTTGATTTGCAG
TTAGGGAAGCTGTTGGAGTTGCGGGAGACGTTGAATAAAGGGGAGGAGGG
TTCATTGTCTGTGAATGATTTTCTGCTTAAAGCAGCGGCATTGGCGAGTA
AGAAGGTCCCAGAGGCGAATGCGAGCTGGCATGGGGAGTTTGTGCGGCAA
TACCACGCGGTCGACATCAATTTGATGGTCGGCGTGGGTGATGGCTTGCT
AGCGCCCGTTGTCCGCAACGTGGACACAAAGGGCCTGCGTGCATTATCCG
GAGAGGTCGCGGGCTTGGTGGCAGGGGCGGAGAGAGGGGAGTTGAGTAGC
GAGGCGTTGCAGTCGGGGACATTTACTCTGGTGAACGTTGGGATGTACGG
TGTGAAATCAGTGGCGCCTATCGTGAATCTTCCCCAGTCCTGTGTGTTGG
GCGTGGGGGCGATTGAGAATCGAGTTGTCCCTGCGGTTGATCCCAGAGAA
GGGGAGGAGGTGTATACGGTCGTGCCTGGGGTGACCGTGACGTTGAGCTG
CGACCATAGAGTGATCGATGGTGCGGTTGGCGCGCAATGGTTGACTGCCT
TCAAGTCCTTGGTGGAGGACCCATTGACTCTTTTGTTGTAG
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protein sequence of NO05G03610.1

>NO05G03610.1-protein ID=NO05G03610.1-protein|Name=NO05G03610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp
MTSWLGRSRRVVSVCLASGSRSSSTSTSSTLGKSTIITRRFPGTAACAVA
LRVIESRRCSSSSVLGTSTPRRIGSEFFAPSLRRMFSSLPSHQVVGMPSL
SPTMEAGTIASWAKKEGESFGPGDVLCEVETDKAVVSFDAQDEGVLAKIL
IQAGSGEVKVGQPIMVIVDDAKDVAAFADYTPDATPAPGAPAKTTTPAAP
AAPAATASSPPFPPPPPTSSSPPASAAAGISLLGHPGRVFASPLAKTLAE
EMGHDLRAIPGTGPNGRVVAADVREYVPAVASQSTAVAAAPAPSATPAAA
AAASVMNVTAPIPGKDFTDYPLSEASKAVAAKLAMAKQTVPHYYLTVDLQ
LGKLLELRETLNKGEEGSLSVNDFLLKAAALASKKVPEANASWHGEFVRQ
YHAVDINLMVGVGDGLLAPVVRNVDTKGLRALSGEVAGLVAGAERGELSS
EALQSGTFTLVNVGMYGVKSVAPIVNLPQSCVLGVGAIENRVVPAVDPRE
GEEVYTVVPGVTVTLSCDHRVIDGAVGAQWLTAFKSLVEDPLTLLL*
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Synonyms
Publications