NO05G03160, NO05G03160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03160 vs. NCBI_GenBank
Match: EWM28098.1 (Lipid-binding START [Nannochloropsis gaditana]) HSP 1 Score: 508.4 bits (1308), Expect = 2.100e-140 Identity = 285/440 (64.77%), Postives = 332/440 (75.45%), Query Frame = 0 Query: 1 MLMLARLLFVVVACGVLVVSRVLIVQGE-KGRGSGSAGSHVRLPMTFDGLGGAASRNENMDGPLDYDSITGKSSSSKLSYRRLRKASRAAAAPGHHYDDGLNVLDLSGGMARRTWPLQRIRMRLRSQVLHLRESWRFSNSSKLVAALISRLPQRSQRQKGASEKRSTRNLGLFAERLIRQLRRQQAGLMDATGEVLAGDGAASLDGVDSRYLSLLRSLEEEGHKALIEEGDDWHQVSEKEDTKVWKRVQAEDTYGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDIAQVGPNTKIVRNRTLPPLQKRAHEFCTIMHVIRRPDGSQVMLTKYTDHPEVPRSSAFARSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAGVPPFVAEKFSVRGVVDFADSLRKALH---SGKQQGQKDQGRQDNRFGELLDQ 437 MLML RLL VVVACGVLVVSRVLIVQG+ K + +AGS+ LP+TF GL S E +D + G SSK+SYRRLRKA+RAAAA + + S G+ RR P Q +R L+SQV +R + + + S VA L+SR P R QR++ SE R +L FAERL+RQLRRQQA L+ +L GD AASL+GVD RYLSLL+SLEEEGH+AL +EG WH VS+KEDTK+W+R AED YGREYPCLKLSTVLHA P+AV+DLLVDSERV EYNKYSKGR D+A+VGP+TKIV NRTLPPLQK+AHEFCTIMHV+RRPDGSQVMLTK+TDHPEVPRSS FARSEIILGVTEV+PHPTDP+RA LTT+SHVKSAG+PPF+AEKFSVRGVVDFA+SLRKALH G Q K + Q R E DQ Sbjct: 1 MLMLVRLLLVVVACGVLVVSRVLIVQGDTKAKAPSTAGSYTHLPLTFGGLDTGGSSEE---ADRRHDLVPG-LGSSKVSYRRLRKATRAAAADSDFSYERKS--SQSDGVTRRLRPFQAVRTTLQSQVRRVRNTLQSTRVSSAVAGLLSRFPPRLQRRR-TSESRPAGHLSSFAERLLRQLRRQQAHLVQDAEAMLNGDAAASLEGVDPRYLSLLQSLEEEGHQALGDEGGGWHPVSDKEDTKIWRRNLAEDAYGREYPCLKLSTVLHASPEAVMDLLVDSERVGEYNKYSKGRDDVARVGPHTKIVWNRTLPPLQKKAHEFCTIMHVVRRPDGSQVMLTKFTDHPEVPRSSRFARSEIILGVTEVRPHPTDPNRAHLTTISHVKSAGIPPFIAEKFSVRGVVDFAESLRKALHLERKGPVQEAKAENFQKRRQEEKQDQ 433
BLAST of NO05G03160 vs. NCBI_GenBank
Match: CBJ49103.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 154.5 bits (389), Expect = 7.800e-34 Identity = 73/174 (41.95%), Postives = 112/174 (64.37%), Query Frame = 0 Query: 208 SRYLSLLRSLEEEGHKALIEEGDDWHQVSEKEDTKVWKRVQAEDTYGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDIAQVGPNTKIVRNRTLPPLQKRAHEFCTIMHV--IRRPDGSQVMLTKYTDHPEVPRSSAFARSEIILGVTEVKPHPTDPDRAQLTT 380 ++YL+ L+ +E +AL G W +V+ + VWK+ +D YG +YPC+K ++ V+ ++VDS RV EYN+YSKGR DI +GP+TKIV N+ PPL K+ H+FCT+MH+ + +GS +++T+ T+HP+ P RSEI+LGVT ++P DP R ++TT Sbjct: 37 TKYLAELQLAQESAERALGTPG--WEEVAHRGGVTVWKKYFPKDEYGYKYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTT 208
BLAST of NO05G03160 vs. NCBI_GenBank
Match: EWM23326.1 (lipid transfer protein 5 [Nannochloropsis gaditana]) HSP 1 Score: 109.8 bits (273), Expect = 2.200e-20 Identity = 58/179 (32.40%), Postives = 94/179 (52.51%), Query Frame = 0 Query: 228 EGDDWHQVSEKEDTKVW-KRVQAEDTYGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDIAQVGPNTKIVRNRTLPPLQKRAHEFCTIMHVIRRPDGSQVMLTKYTDHPEVPRSSAFARSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAG-VPPFVAEKFSVRGVVDF 405 E D W VS+ + V K + + D +Y C+K S L A PD ++ L D+ RV EYNK+ +D+ + +TK+V + P + +FCT++H + DG+ V++ + +HPE PR+ + R+EI++G ++P P P A T V+ V G PP + K + G F Sbjct: 440 EADGWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAPPAIVNKVTSWGPPTF 618
BLAST of NO05G03160 vs. NCBI_GenBank
Match: XP_002181535.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46749.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 103.6 bits (257), Expect = 1.600e-18 Identity = 60/175 (34.29%), Postives = 95/175 (54.29%), Query Frame = 0 Query: 240 DTKVWKRVQAEDTYGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDI-AQVGPNTKIVRNRTLPPLQKRAHEFCTIMHVIRRPDGSQVMLTKYTDHPEVPRSS--AFARSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAGVPPFVAEKFSVRGVVDFADSLRKA 412 D + W D YG P +K +V+ P ++DLL+DS RV YN +S GR+D+ N+KIVRNRT PPL + T++H + DG+ +++++ SS ++S+I+LGV ++P+ + LT V+HV S+ VP +AE+ V+ V F +R A Sbjct: 231 DIQTWTGKSKRDGYGSNLPWIKTRSVVPMTPVEMVDLLMDSSRVTTYNPWSIGREDLWVSEDNNSKIVRNRTQPPLGSKVMVATTLLHAQQLDDGAWMLVSRAVGGDVYHDSSDKNASKSDILLGVNLLEPY--SDHSSVLTAVTHVYSSAVPLMLAERLGVKSAVKFVKDIRSA 403
BLAST of NO05G03160 vs. NCBI_GenBank
Match: CBJ33383.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 102.4 bits (254), Expect = 3.500e-18 Identity = 59/199 (29.65%), Postives = 106/199 (53.27%), Query Frame = 0 Query: 227 EEGDDWHQVSEKED--TKVWKRVQAEDTYGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDIAQVGPNTKIVRNRTLPPLQ-KRAHEFCTIMHVIRRPDGSQVMLTKYTDHPEVPRSSAFARSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAGV-PPFVAEKFSVRGVVDFADSLRKALHSGKQQGQK 422 EEG W +V + V ++ +++ G ++ C++ + P +A+ +++ SERV EYNK+ +D+ + NTK+V + PL + +F T++HV R DGS +++ + HPE P S+ + R E+IL ++P P D +R Q T ++ V G+ P ++ K S VDF + + A +G+ + K Sbjct: 346 EEG-GWERVVSTRNGALSVERKFIGKNSGGSKFACIRAWCSMDVPAEAIAEMMESSERVKEYNKWFLEGRDLELLDENTKVVWASSPSPLPFVKPRDFVTVVHVRRLEDGSIIVVNRGYKHPEAPPSTEYVRGEVILAANVIRPDPKDRNRTQFTLLTQVDPGGIAPAWIVNKISAHDPVDFLERVETA--AGRSESAK 541
BLAST of NO05G03160 vs. NCBI_GenBank
Match: EJK68469.1 (hypothetical protein THAOC_10348 [Thalassiosira oceanica]) HSP 1 Score: 101.7 bits (252), Expect = 6.000e-18 Identity = 71/218 (32.57%), Postives = 104/218 (47.71%), Query Frame = 0 Query: 219 EEGHKALIEEGDDWHQVSEKEDTKVWK-RVQAEDTYGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDIA--QVGPNT----------KIVRNRTLPPLQKRAHEFCTIMHVIR-RPDGSQVMLTKYTDHPEVPRS-------------SAFARSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAGVPPFVAEKFSVRGVVDFADSLR 410 EEG A + + ++ VW + ++ YG E P +K ++++ P + DLL+DS +V YNK S GR D+ Q G +T KIVRN T PP+ EF T MH R RP S + + + V R+ R+EI+LGV +K P +P R +LT V+HV S +P +A+ V+G VDF +R Sbjct: 528 EEGGVATTAVTRRQRSLIDSQEVLVWSGKFKSSQGYGAELPIIKTTSIIDKSPQYLADLLMDSNKVKLYNKMSLGRDDVKVFQSGIDTLEGKHGDGESKIVRNLTKPPMVNGLLEFVTCMHARRLRPSDSSFLGEEAEGYVVVSRAVLGDKYDFASDSGEKLVRNEILLGVNVLKSIPGEPGRTELTAVTHVYSPMIPLMLAKNAGVKGAVDFVRDIR 745
BLAST of NO05G03160 vs. NCBI_GenBank
Match: GAX14264.1 (hypothetical protein FisN_1Hu459 [Fistulifera solaris]) HSP 1 Score: 101.3 bits (251), Expect = 7.900e-18 Identity = 65/190 (34.21%), Postives = 106/190 (55.79%), Query Frame = 0 Query: 237 EKEDTKVWKRVQAEDTYGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDI----AQVG--PNTKIVRNRTLPPLQKRAHEFCTIMHVIRRP---DGSQVMLTK------YTDHPEVPRSSAFARSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAGVPPFVAEKFSVRGVVDFADSLRKA 412 EK D +VW ++ +G E P +K ++L PP+ V++LL+DSERV YN++S+GR D A+ G TKIV++ T PPL + T++H RP DG +++++ Y D + S +RS+I+LGV + P D + LT+++HV S +P +AE+ R ++FA +R + Sbjct: 92 EKGDIQVWTGKAKKEGHGSEVPFIKSRSILPMPPEEVVELLMDSERVKTYNQWSQGRTDCWIAPAEEGSQKQTKIVKSTTQPPLGAKPVVSVTLLHA--RPWGSDGGWIVVSRSPGGNAYFDADD----SLTSRSDILLGVNLLS--PLDEESCILTSLTHVYSPAIPAMLAERLGARSAINFAIDVRNS 273
BLAST of NO05G03160 vs. NCBI_GenBank
Match: XP_002184526.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43925.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 96.7 bits (239), Expect = 1.900e-16 Identity = 60/191 (31.41%), Postives = 96/191 (50.26%), Query Frame = 0 Query: 239 EDTKVWKRVQAEDTYGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDIAQV---------GPNTKIVRNRTLPPLQKRAHEFCTIMHVIRRPDGS-------QVMLTKYTDHPEVPRSSAFA---RSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAGVPPFVAEKFSVRGVVDFADSLRK 411 ED VW V YG + P ++ ++V++ P ++DLL+DS RV EYNK S GR D+ + G TK++R+ + PPL ++ +F +I HV + D S V + D A SEI+LGV +K P++ L TV+H++S VP +A++ ++ +F LR+ Sbjct: 269 EDVLVWSGVFPTGFYGSDLPAVRSASVINMSPQDLVDLLLDSSRVQEYNKLSLGRIDLLTLQATMEDGPFGGITKVMRSESKPPLVRKTLQFTSICHVRKLADDSGYKIVSRAVTMPTAADQQSTSGIGAVGPVMHSEILLGVNILKRIEGAPNQTGLVTVNHIRSPMVPMMIAKRIGLQASYNFVHDLRQ 459
BLAST of NO05G03160 vs. NCBI_GenBank
Match: CBN79692.2 (conserved unknown protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 94.7 bits (234), Expect = 7.400e-16 Identity = 44/132 (33.33%), Postives = 74/132 (56.06%), Query Frame = 0 Query: 256 EYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQDIAQVGPNTKIVRNRTLPPLQKRAHEFCTIMHVIRRPDGSQVMLTKYTDHPEVPRSSAFARSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAG 388 ++ C+K S +L PP+ V L D+ RV EYN++ + +D+ + ++KI + +A +FCT++H DG+ ++K +HP PR+S + RSEI+L ++P P DP R + V+HV G Sbjct: 400 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGG 531
BLAST of NO05G03160 vs. NCBI_GenBank
Match: XP_002294841.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87621.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 91.3 bits (225), Expect = 8.100e-15 Identity = 61/189 (32.28%), Postives = 92/189 (48.68%), Query Frame = 0 Query: 253 YGREYPCLKLSTVLHAPPDAVIDLLVDSERVAEYNKYSKGRQD--IAQVGPNT----------KIVRNRTLPPLQKRAHEFCTIMHV--IRRPDGSQVMLTKYTDHPE-----VPRS------------------SAFARSEIILGVTEVKPHPTDPDRAQLTTVSHVKSAGVPPFVAEKFSVRGVVDF 405 YG E P +K ++++ P + +LL+DSE+V YNK S GR+D + Q G +T K+VRN T PP+ EF T MH ++ D + K P V R+ + R++I+LGV +K P +PD+ +LT V+HV S +P +A+ V+G VDF Sbjct: 556 YGAELPIIKTMSIINKSPKDLAELLMDSEKVKVYNKMSLGRRDEVVFQTGVDTVGGEFGDGESKVVRNLTKPPMVNSIIEFVTCMHARKLKPEDTKTISPNKPNSKPAEGYIVVSRAVNGGKWSADDSSNNNSNGEKYIRNDILLGVNLLKAVPGEPDKTELTAVTHVYSPLLPLMLAKNAGVKGAVDF 744 The following BLAST results are available for this feature:
BLAST of NO05G03160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03160 ID=NO05G03160|Name=NO05G03160|organism=Nannochloropsis oceanica|type=gene|length=2503bpback to top protein sequence of NO05G03160.1 >NO05G03160.1-protein ID=NO05G03160.1-protein|Name=NO05G03160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=437bpback to top Synonyms
Publications
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