NO05G02120, NO05G02120 (gene) Nannochloropsis oceanica

Overview
NameNO05G02120
Unique NameNO05G02120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2182
Alignment locationchr5:570489..572670 -

Link to JBrowse

Properties
Property NameValue
DescriptionThreonine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:570489..572670 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR029144Thr_synth_N
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Homology
BLAST of NO05G02120 vs. NCBI_GenBank
Match: EWM28349.1 (threonine synthase [Nannochloropsis gaditana])

HSP 1 Score: 282.0 bits (720), Expect = 2.600e-72
Identity = 168/297 (56.57%), Postives = 188/297 (63.30%), Query Frame = 0
Query:    1 MRYISTR---GESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEE---VPLEEIVDASFASFATPEVVTFKALPWP----SSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXG------NVRVVAVEGTSDDLDEPIAELFQDKDYR--------SHHC 274
            MRYISTR     SS SS R +FREAVLAGWAPDGGM LPERIP V+  +LE WRGL+YP+LVT+LLALF+ DDGD +D     E   VPL +IVDASFASFA PEVV +KALPWP    SS                           LYIAELFHGPSLAFKDLGMQVL ++L  YL ++ ++MTFLVGTSGDTGPSAAAAV+GK  MR++VLYPLGRVS  QEAQM                             NVRVVAVEG+SDDLD PIA LF D  YR        SH C
Sbjct:    1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFM-DDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYRCGWFRDPPSHDC 296          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: KOO25585.1 (threonine synthase-like 2 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 204.1 bits (518), Expect = 6.800e-49
Identity = 129/326 (39.57%), Postives = 167/326 (51.23%), Query Frame = 0
Query:   18 TFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFV-TDDGDEDDGKTEEEVPLEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPL---GRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            +F +AVLAGWA DGGML P ++PQ+    L  W  LSYPQL   +L LFV  DD D   G+      L+ ++  SF+ F + +VV    L                                L IAEL+HGP+LAFKDLGM VL  +L+  L ++ +++  LVGTSGDTG SA  AV+G  N+ ++VLYPL     ++P+QE QM                       NV VV VEGTSDDLD PI   F+D  ++  H LGS+NSVN+VRLLVQ  H+FYAYL + P  +                       + F VP GA GH
Sbjct:   23 SFGDAVLAGWADDGGMLWPTQVPQLDQQRLAAWASLSYPQLCATILKLFVPADDPDIAHGE------LDALIARSFSGFGSADVVELFTL------------------------EGGDLGPGLAIAELWHGPTLAFKDLGMLVLGQMLSHLLRRRRERLLLLVGTSGDTGSSAIEAVRGLPNVDIVVLYPLRGYSSITPVQERQM---------------TSVAEVEANVTVVGVEGTSDDLDVPIEACFRDAPFKRLHALGSVNSVNVVRLLVQSVHFFYAYLRVCPAAD---------------------RTVQFAVPCGAGGH 282          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: XP_020385607.1 (threonine synthase-like 2 [Rhincodon typus])

HSP 1 Score: 198.7 bits (504), Expect = 2.800e-47
Identity = 121/339 (35.69%), Postives = 174/339 (51.33%), Query Frame = 0
Query:    1 MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVPLEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            M+Y STRG      + + F + + +G+APDGG+ +PE IP +  A+L+ W   SYP+LV  + +LF++     DD   E+   L++++  +F  F   ++V    L                                L + EL+HG + AFKDL M  +  +L ++L K+ + +T LVGTSGDTG SA  +++G ENM +IVL P GR SP+QE QM                       NV V AV+GTSD+LDEPI  +F D ++   + + SLNS+N  R++VQI HYFYAY    P  +                   PLPL+  VVPTGAAG+
Sbjct:    1 MKYTSTRG----GLTGVNFEQVLFSGYAPDGGLFMPEEIPSLDTAILQTWSTYSYPRLVEEICSLFIS----RDDLPRED---LKDLISQAFQRFRHKDIVKLAKL-----------------------------KNELNVLELWHGVTYAFKDLAMSCVGQLLQYFLRKRQKHVTILVGTSGDTGSSAIESIRGMENMNIIVLLPHGRCSPIQELQM-----------------TTVIEDNVHVFAVDGTSDELDEPIRNVFADTEFVKKYNIMSLNSINWARVMVQIAHYFYAYFQCSPSMQN-----------------IPLPLVEVVVPTGAAGN 265          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: XP_013988388.1 (PREDICTED: threonine synthase-like 2 [Salmo salar])

HSP 1 Score: 197.6 bits (501), Expect = 6.300e-47
Identity = 123/339 (36.28%), Postives = 169/339 (49.85%), Query Frame = 0
Query:    1 MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVPLEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            M+Y STRG          F++ +L+G+APDGGM +PE +P +TP  L  W  LSYPQLVT + +LF+  +             LE +V A+ + FA P VV+   L                                L + ELFHG +LAFKDL M      L+++L K+ ++   LVGTSGDTG SA  + KG   + V+V+YP GR++ +QE QM                       N+ V A +G+SDD+D PI  LF D++    H L SLNSVN  R++VQ+ H+ YAYLH+   E+                  +PLP L  VVPTG AG+
Sbjct:    1 MQYCSTRG----GVQGWDFQDVLLSGYAPDGGMFMPETLPTLTPDTLRSWSSLSYPQLVTEVCSLFIPTE-------LIPRADLEGLVSAALSGFAVPGVVSLARL-----------------------------KGGLCVLELFHGETLAFKDLAMTCTVRFLDYFLRKESRRAIVLVGTSGDTGGSAIQSAKGLRGVDVVVVYPRGRITLVQEKQM-----------------ITCLEDNIHVFAADGSSDDIDVPIRRLFSDQELVKQHSLMSLNSVNWSRVMVQLAHFLYAYLHVSGLEQA--------------ETGAPLPTLEMVVPTGGAGN 268          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: XP_010876268.1 (PREDICTED: threonine synthase-like 2 isoform X1 [Esox lucius])

HSP 1 Score: 196.8 bits (499), Expect = 1.100e-46
Identity = 121/342 (35.38%), Postives = 171/342 (50.00%), Query Frame = 0
Query:    1 MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVP---LEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            M Y STRG          F+E + +G+APDGGM +PE +P +TP  L  WR LSYPQLV  + ++F+            E +P   LE++V+ + + F+ P  V+   L                                L + ELFHG ++AFKDL M    H LN++L +   +   +VGTSGDTG SA  + KG   + ++V+YP GR++P+QE QM                       N+ V A +G+SDD+D PI  LF D++    H L SLNSVN  R++VQ+ H+ YAYLH+   EE                 A+PLP+L  +VPTG AG+
Sbjct:    4 MWYCSTRGGVQGWG----FQEVLFSGYAPDGGMFMPETLPTLTPDTLRSWRSLSYPQLVISVCSVFI----------PTEVIPLADLEDLVNTALSGFSVPGAVSLAKL-----------------------------KQGLNVLELFHGKTMAFKDLAMTCTVHFLNYFLHENSLRAIVVVGTSGDTGGSAIQSAKGLSGLDLVVVYPRGRITPVQEKQM-----------------TTCLEDNIHVFAADGSSDDVDVPIRRLFSDQELVKRHRLMSLNSVNWSRVMVQLAHFIYAYLHVSGLEEAEI--------------AAPLPVLEIIVPTGGAGN 271          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: XP_019908827.1 (PREDICTED: threonine synthase-like 2 isoform X2 [Esox lucius] >XP_019908828.1 PREDICTED: threonine synthase-like 2 isoform X2 [Esox lucius] >XP_019908829.1 PREDICTED: threonine synthase-like 2 isoform X2 [Esox lucius] >XP_019908830.1 PREDICTED: threonine synthase-like 2 isoform X2 [Esox lucius])

HSP 1 Score: 196.8 bits (499), Expect = 1.100e-46
Identity = 121/342 (35.38%), Postives = 171/342 (50.00%), Query Frame = 0
Query:    1 MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVP---LEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            M Y STRG          F+E + +G+APDGGM +PE +P +TP  L  WR LSYPQLV  + ++F+            E +P   LE++V+ + + F+ P  V+   L                                L + ELFHG ++AFKDL M    H LN++L +   +   +VGTSGDTG SA  + KG   + ++V+YP GR++P+QE QM                       N+ V A +G+SDD+D PI  LF D++    H L SLNSVN  R++VQ+ H+ YAYLH+   EE                 A+PLP+L  +VPTG AG+
Sbjct:    1 MWYCSTRGGVQGWG----FQEVLFSGYAPDGGMFMPETLPTLTPDTLRSWRSLSYPQLVISVCSVFI----------PTEVIPLADLEDLVNTALSGFSVPGAVSLAKL-----------------------------KQGLNVLELFHGKTMAFKDLAMTCTVHFLNYFLHENSLRAIVVVGTSGDTGGSAIQSAKGLSGLDLVVVYPRGRITPVQEKQM-----------------TTCLEDNIHVFAADGSSDDVDVPIRRLFSDQELVKRHRLMSLNSVNWSRVMVQLAHFIYAYLHVSGLEEAEI--------------AAPLPVLEIIVPTGGAGN 268          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: XP_020834736.1 (threonine synthase-like 2 [Phascolarctos cinereus])

HSP 1 Score: 196.1 bits (497), Expect = 1.800e-46
Identity = 123/339 (36.28%), Postives = 171/339 (50.44%), Query Frame = 0
Query:    1 MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVPLEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            MRY+STRG + S    + F  A+ +G+APDGG+ +PE IPQ+    L++W  LSYP LVT L +LF+       D +   +  L+ ++D +F+ F   +VV    +                                L + EL+HG + AFKDL M      L ++L K+ + +T +VGTSGDTG SA  +V+G +N+ +IVL PLGR S +QE QM                       NV V  VEG SD+LDEPI ++F D  +   H L SLNS+N  R+LVQ+ HYF+AY    P  +                   PLP +  VVPTGAAG+
Sbjct:    1 MRYVSTRGGTPS----IDFEGALFSGYAPDGGLFMPEEIPQLDRETLKQWSTLSYPALVTELCSLFI-------DPERMPKKDLKGLIDRAFSRFRHRDVVHLSRM-----------------------------KNGLNVLELWHGVTYAFKDLSMSCTGQFLQYFLEKRQKHVTIVVGTSGDTGSSAIESVRGAKNIDIIVLLPLGRCSKIQELQMTTVIEE-----------------NVHVFGVEGDSDELDEPIKDVFADVAFAKKHNLMSLNSINWSRVLVQMAHYFFAYFQCAPSTD-----------------IYPLPTVEVVVPTGAAGN 265          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: XP_024236275.1 (threonine synthase-like 2 [Oncorhynchus tshawytscha])

HSP 1 Score: 194.9 bits (494), Expect = 4.100e-46
Identity = 121/339 (35.69%), Postives = 169/339 (49.85%), Query Frame = 0
Query:    1 MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVPLEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            M+Y STRG          F++ +L+G+APDGGM +PE +P +TP  L  W  LSYPQLVT + +LF+  +             L+ +V A+ + FA P VV+   L                                L + ELFHG +LAFKDL M      L+++L K+ ++   LVGTSGDTG SA  + +G   + V+V+YP GR++ +QE QM                       N+ V A +G+SDD+D PI  LF D++    H L SLNSVN  R++VQ+ H+ YAYLH+   E+                  +PLP L  VVPTG AG+
Sbjct:    1 MQYCSTRG----GVQGWDFQDVLLSGYAPDGGMFMPETLPTLTPDTLRSWSSLSYPQLVTEVCSLFIPTE-------LIPRADLDGLVSAALSGFAVPGVVSLARL-----------------------------KGGLCVLELFHGETLAFKDLAMTCTVRFLDYFLRKESRRAIVLVGTSGDTGGSAIQSARGLGGVDVVVVYPRGRITLVQEKQM-----------------TTCLEDNIHVFAADGSSDDIDVPIRRLFSDQELVKQHSLMSLNSVNWSRVMVQLAHFIYAYLHVSGLEQAEM--------------GAPLPALEMVVPTGGAGN 268          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: XP_020474328.1 (LOW QUALITY PROTEIN: threonine synthase-like 2 [Monopterus albus])

HSP 1 Score: 194.5 bits (493), Expect = 5.400e-46
Identity = 123/342 (35.96%), Postives = 171/342 (50.00%), Query Frame = 0
Query:    1 MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVP---LEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            M+Y STRG          FR+ + +G+APDGGM +PE +P +TP  L  WRGL+Y +LV  + +LF+            +++P   LE +V  + +SF+ PEVV    L                                L I ELFHG +LAFKDL M    H+L +++ K++ + T LVGTSGDTG SA  +VKG   + V+V+YP  RV+P+QE  M                       NV V A +GTSDD+D+ +  +F D++    H L SLNSVN  R+++Q+ H+ YAYL L   E G                 + LP L  VVPTG AG+
Sbjct:    1 MQYCSTRG----GVHGWNFRDVLFSGYAPDGGMFMPESVPVLTPDTLRSWRGLTYTKLVVEVASLFI----------PSQQIPRQDLEVLVGEALSSFSVPEVVRIARL-----------------------------NKDLSILELFHGETLAFKDLAMTCTVHILEYFVRKENSRATILVGTSGDTGGSAIQSVKGLSGLDVVVVYPRDRVTPVQEKHM-----------------ITCLEDNVHVFAADGTSDDIDQRLRRIFADQELVKSHGLMSLNSVNWSRVMIQLAHFIYAYLELSGLELGEAD--------------AALPELEVVVPTGGAGN 268          
BLAST of NO05G02120 vs. NCBI_GenBank
Match: XP_023839726.1 (threonine synthase-like 2 [Salvelinus alpinus])

HSP 1 Score: 194.5 bits (493), Expect = 5.400e-46
Identity = 121/339 (35.69%), Postives = 169/339 (49.85%), Query Frame = 0
Query:    1 MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEWRGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVPLEEIVDASFASFATPEVVTFKALPWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLYIAELFHGPSLAFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMRVIVLYPLGRVSPLQEAQMXXXXXXXXXXXXXXXXXXXXXXGNVRVVAVEGTSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLIPPEEGGXXXXXXXXXXXXXVPASPLPLLSFVVPTGAAGH 340
            M+Y STRG          F++ +L+G+APDGGM +PE +P +TP  L  W  LSYPQLVT + +LF+  +             L+ +V A+ + FA P VV+   L                                L + ELFHG +LAFKDL M      L+++L K+ ++   LVGTSGDTG SA  + +G   + V+V+YP GR++ +QE QM                       N+ V A +G+SDD+D PI  LF D++    H L SLNSVN  R++VQ+ H+ YAYLH+   E+                  +PLP L  VVPTG AG+
Sbjct:    1 MQYCSTRG----GVQGWNFQDVLLSGYAPDGGMFMPETLPTLTPDTLRSWSSLSYPQLVTEVCSLFIPTE-------LIPRADLDGLVSAALSGFAVPGVVSLARL-----------------------------KGGLCVLELFHGETLAFKDLAMTCTVRFLDYFLRKESRRAIVLVGTSGDTGGSAIHSARGLGGVDVVVVYPRGRITLVQEKQM-----------------ITCLEDNIHVFAADGSSDDIDVPIRRLFSDQELVKQHSLMSLNSVNWSRVMVQLAHFLYAYLHVSGLEQA--------------ETGAPLPALEMVVPTGGAGN 268          
The following BLAST results are available for this feature:
BLAST of NO05G02120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28349.12.600e-7256.57threonine synthase [Nannochloropsis gaditana][more]
KOO25585.16.800e-4939.57threonine synthase-like 2 [Chrysochromulina sp. CC... [more]
XP_020385607.12.800e-4735.69threonine synthase-like 2 [Rhincodon typus][more]
XP_013988388.16.300e-4736.28PREDICTED: threonine synthase-like 2 [Salmo salar][more]
XP_010876268.11.100e-4635.38PREDICTED: threonine synthase-like 2 isoform X1 [E... [more]
XP_019908827.11.100e-4635.38PREDICTED: threonine synthase-like 2 isoform X2 [E... [more]
XP_020834736.11.800e-4636.28threonine synthase-like 2 [Phascolarctos cinereus][more]
XP_024236275.14.100e-4635.69threonine synthase-like 2 [Oncorhynchus tshawytsch... [more]
XP_020474328.15.400e-4635.96LOW QUALITY PROTEIN: threonine synthase-like 2 [Mo... [more]
XP_023839726.15.400e-4635.69threonine synthase-like 2 [Salvelinus alpinus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02120.1NO05G02120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669826gene_3013Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02120.1NO05G02120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02120 ID=NO05G02120|Name=NO05G02120|organism=Nannochloropsis oceanica|type=gene|length=2182bp
ATGCGGTACATTAGCACCCGAGGAGAATCTTCCTCCTCTTCGTCGCGCCT
CACATTTCGTGAAGCCGTGCTAGCAGGATGGGCTCCGGATGGAGGCATGC
TCCTACCAGAGCGCATCCCGCAGGTGACGCCTGCGATGCTGGAAGAATGG
AGAGGCCTCTCATATCCCCAATTAGTCACCAGGCTCTTGGCTTTGTTTGT
GACGGACGACGGGGACGAGGACGACGGGAAGACCGAAGAGGAAGTGCCAT
TGGAAGAGATTGTGGACGCCAGCTTTGCCTCCTTTGCTACGCCCGAGGTG
GTGACATTCAAGGCCTTGCCGTGGCCTTCGTCCTCGTCGTCGTCCTCCTC
CTCCTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTGCTCCTCCTCCCCCT
CCTCTGCTCCCTCCCTCTATATCGCCGAATTGTTCCACGGGCCCTCCTTG
GCATTCAAAGACTTAGGCATGCAAGTCTTAGCTCATGTCCTCAACTTCTA
CCTCTCCAAGCAACACCAAAAAATGACCTTTCTAGTTGGCACATCAGGAG
ACACGGGGCCTTCAGCAGCAGCGGCAGTTAAGGGCAAAGAGAACATGAGG
GTGATAGTATTATACCCCCTCGGGAGGGTCAGTCCCTTGCAGGAAGCTCA
GATGCTGGCCGCGCATGAGGGAGGGGGAGGGGGAGGGGGAGGGGGGAGGA
AGAAGGAAGGGAAGAAGAGGGGGAACGTGCGGGTGGTGGCAGTGGAGGGG
ACAAGCGATGATCTGGACGAACCTATCGCCGAATTGTTTCAGGATAAAGA
TTATAGgtatggcctgtctgcttgtcttttcctccctccctccttccctc
ccttcctcgctccttccctcgctctctacgcgcttgacagcgcgtgctat
tctctccctcgatccctcaatccctgcctccttcccttagcatttgtgaa
aacaggtctacctacccacacatgtcgctgctcacttaactaacccctcg
ttccctccctccctccctccgtccttctctccctccctcccttcagGTCC
CACCACTGCCTAGGCAGTCTCAACAGTGTCAACATCGTGCGTCTCCTGGT
TCAAATCTTTCACTATTTTTATGCTTACCTCCACCTCATTCCCCCCGAGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAAGTAGGGTCAGTA
CCTGCTTCCCCCTTGCCACTCCTCTCGTTTGTTGTGCCTACGGGCGCGGC
AGGACATAGGCACGCCCGTTGAAGTGATCGTCCTCTCATTCGCTGCTCGC
CCATGGCGCATGATACAAAAATCGGCTTGAGGGAGGCTGCTCTTGAAAAC
ATCCTTGTGTGAAGTTTTGGATGAGGAATTTTCCCCTTACTTTGTTCCTA
CTTTGTCTGTCTGTGGAGACTCTTTGGTTGGTTCTCGAGGAGGTCTGCAG
GCACTCTTAGCTTTGATTCAATAGCTCGCTCTTACCCAGCTATTTCGAGG
GTATTTCGTGTTCTCCGGGGCATGCTGTCGCCTTGACCATAATTGAATGC
CTTGAATTTTATTCTACCCATCTCCATCGTAGCATTAGGCGGCACAACAA
TAACCATCGACATTATTATTATGTCCTCCAAGGATACCAAGCTTTGTCAG
AATCAGTATTGCCCACGCCCATGGGTTAGAGGCCTAGCCTATGGGAGGGA
GGGAAGCGAGGAGGATTTGGAGACATGTGAGAAAGAACGATGTTGATGAG
ATGAATTAATAAGAATGAGAAAATGACAAGAGAGAGAGACCTGCAAGCAC
AAAAAAGAGGATATAAAAATGATTGTAAAGAGAAGAAGGAAGAAGAAAAA
GAAGAAGAAAGAAAAGAGAGGAAAACGAGGAGGAGGAAGAGGAGGAGATT
GAGGAGAAGTGTGAAGAAGAGTATCTTAACACGATGACGACCGCTTCATC
AACGGCAGCAACGACAACAACGAGAAAAAGAAATAGAACAAAGATGACGG
GTAGAAGAGAATATAAAAGTAGAAACAGCAGGGGGAGAAGAGGAAATAGA
GGAAGAAAATAAAGCAGGAGTCGAAAAGGAACAAGAAAAAGGAGAACAAG
GAGATCTTTTGATCCTATCGACACCAAAGCACATCATGCCCCGACGCATG
GAATTTTTTTATCTTGTATTTTTTTGGCACCG
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protein sequence of NO05G02120.1

>NO05G02120.1-protein ID=NO05G02120.1-protein|Name=NO05G02120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=344bp
MRYISTRGESSSSSSRLTFREAVLAGWAPDGGMLLPERIPQVTPAMLEEW
RGLSYPQLVTRLLALFVTDDGDEDDGKTEEEVPLEEIVDASFASFATPEV
VTFKALPWPSSSSSSSSSSSSSSSSSSSCSSSPSSAPSLYIAELFHGPSL
AFKDLGMQVLAHVLNFYLSKQHQKMTFLVGTSGDTGPSAAAAVKGKENMR
VIVLYPLGRVSPLQEAQMLAAHEGGGGGGGGGRKKEGKKRGNVRVVAVEG
TSDDLDEPIAELFQDKDYRSHHCLGSLNSVNIVRLLVQIFHYFYAYLHLI
PPEEGGREGGREGGRKVGSVPASPLPLLSFVVPTGAAGHRHAR*
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Synonyms
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