NO05G01930, NO05G01930 (gene) Nannochloropsis oceanica

Overview
NameNO05G01930
Unique NameNO05G01930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2992
Alignment locationchr5:526346..529337 -

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Properties
Property NameValue
DescriptionDelta(12)-fatty acid dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:526346..529337 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR005804Fatty_acid_desaturase-1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO05G01930 vs. NCBI_GenBank
Match: AUX45106.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum])

HSP 1 Score: 189.1 bits (479), Expect = 2.300e-44
Identity = 107/268 (39.93%), Postives = 145/268 (54.10%), Query Frame = 0
Query:   39 LTNDPIAWPTLILFAASLTTYLLPILLFHDNPTYWTVPVT-----AVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELG 302
            L   PI WPT+ LF AS T +   +       T W  PVT     AVA Y +FT MHEA HR++ A    +N +IG +S ++   APF A R  H+ HHK+TN+  +DPDHWS G GP W+ P  W TQ L+YY+ + R   ++   E  E V    V L  V+     G G  + ++   P  +    LA++FDY PH+PH  + A+D Y  T  +       D     V L  QNYH IHHLYP +PFY+Y  +W+  R+ LL+LG
Sbjct:   36 LQTRPIEWPTVALFGASYTLWAAAVAA---GLTGWVSPVTAVIAAAVAAYAVFTPMHEAGHRSL-ARSALLNGVIGRLSGVL-LMAPFLAVRHFHVEHHKHTNEADQDPDHWS-GRGPWWLLPLRWATQDLYYYYLFLRSYRAQKRGERIETVATMAVFLGLVALAFGLGYGEVVLLYWIAPARVAIFFLAFAFDYLPHYPHGVTAAQDRYRATRAV-------DSAIFNVLLFGQNYHLIHHLYPAVPFYRYRAVWKYQREELLKLG 290          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_104983533.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum])

HSP 1 Score: 189.1 bits (479), Expect = 2.300e-44
Identity = 107/268 (39.93%), Postives = 145/268 (54.10%), Query Frame = 0
Query:   39 LTNDPIAWPTLILFAASLTTYLLPILLFHDNPTYWTVPVT-----AVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELG 302
            L   PI WPT+ LF AS T +   +       T W  PVT     AVA Y +FT MHEA HR++ A    +N +IG +S ++   APF A R  H+ HHK+TN+  +DPDHWS G GP W+ P  W TQ L+YY+ + R   ++   E  E V    V L  V+     G G  + ++   P  +    LA++FDY PH+PH  + A+D Y  T  +       D     V L  QNYH IHHLYP +PFY+Y  +W+  R+ LL+LG
Sbjct:   57 LQTRPIEWPTVALFGASYTLWAAAVAA---GLTGWVSPVTAVIAAAVAAYAVFTPMHEAGHRSL-ARSALLNGVIGRLSGVL-LMAPFLAVRHFHVEHHKHTNEADQDPDHWS-GRGPWWLLPLRWATQDLYYYYLFLRSYRAQKRGERIETVATMAVFLGLVALAFGLGYGEVVLLYWIAPARVAIFFLAFAFDYLPHYPHGVTAAQDRYRATRAV-------DSAIFNVLLFGQNYHLIHHLYPAVPFYRYRAVWKYQREELLKLG 311          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: KYF71553.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum])

HSP 1 Score: 181.0 bits (458), Expect = 6.100e-42
Identity = 100/264 (37.88%), Postives = 144/264 (54.55%), Query Frame = 0
Query:   39 LTNDPIAWPTLILFAASLTTYLLPIL--LFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLEL 301
            L   PI WPTL+LFA S   +   +   +     T   V   AVA Y +FT MHEAAHR++ A    +N ++G ++ L+   APF A R  H+ HHK+TN+  +DPDHWS G GP ++ P  W TQ LHYY+ + R   ++   E  E V     +L  V+     G G ++ ++  +P  +    LA++FDY PH+PH  + A+D Y  T  +       D     V L  Q YH IHHLYP +PF++Y  +W++ R+ LL L
Sbjct:   65 LQTRPIEWPTLVLFAGSYALWAAAVTAGVMGWVSTVPAVLAAAVAAYAVFTPMHEAAHRSL-ARSALLNGVVGRLAGLL-LMAPFLAVRHFHIEHHKHTNEADRDPDHWS-GRGPWYLLPLRWATQDLHYYYLFLRSYGAQKRSERIETVATLAAMLSLVALAFGLGFGERVVLYWIVPARLAIFFLAFAFDYLPHYPHGITAAQDRYRATRAV-------DSALFNVLLFGQTYHLIHHLYPAVPFFRYRTVWKHQREELLRL 318          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_051485701.1 (hypothetical protein [Nocardioides sp. J54])

HSP 1 Score: 177.6 bits (449), Expect = 6.800e-41
Identity = 105/272 (38.60%), Postives = 150/272 (55.15%), Query Frame = 0
Query:   44 IAWPTLILFAASLTTY---LLPILLFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHIS-SLICFQAPFQAFRFIHLSHHKYTNDPKK-DPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPL-IYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFG 310
            +AWPTL L+  +L  +   L   L +  +P + TVP+ A  T+ MF+ +HEA H AIS   R VN+ +GH+S  L+   A F   +FIH+ HH+ TN+PK  DPD W    GP W  PF W T  + Y   Y R I+ RP  E    +LV  V+  + + + + G G++L     +P+ I    LA+ FDY PHH    ++ ED Y  T +  G      G  L  PL +YQNYH +HHL+P+IPFY+Y   WR + +  L+    + +WFG
Sbjct:   33 MAWPTLALYVGTLALFGIELAGALAWGWSP-WVTVPMGAAVTFLMFSVLHEATHHAISTNTR-VNDALGHLSVPLVVPWATFPLVKFIHIEHHRNTNEPKSIDPDKW-CDEGPAWQYPFRWATIDIWYIVYYLRRINDRPRREVVSVLLVFTVVAGAFAAVAAAGYGHELLWAWFIPQRIGIMFLAWWFDYLPHHGLTRTQREDRYQATRVRVG------GEALLTPLFVYQNYHLVHHLHPSIPFYRYVRAWRRNEQAYLDRNAAISTWFG 295          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: PKM22075.1 (hypothetical protein CVV10_06170 [Gammaproteobacteria bacterium HGW-Gammaproteobacteria-14])

HSP 1 Score: 174.1 bits (440), Expect = 7.500e-40
Identity = 99/252 (39.29%), Postives = 141/252 (55.95%), Query Frame = 0
Query:   44 IAWPTLILFAASLTTYLLPILLFHDN--PTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAP-FQAFRFIHLSHHKYTNDPK-KDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWR 292
            IAWPT++LFAA+   Y+   L       P+   + + A+A +  FT  HEA+H A+S E++ +N+ +G IS L    AP F+AFRFIH+ HH++ N  + KDPD W  G G  W  P  W T  L+YY  Y   +  RP DE  E +L     +L V+ ++  G   +  ++  +P  I    LA +FD+ PHHPH+ S  ED Y  T+   G+        LT  L+YQNYH +HHLYP  PFY+Y  +W+
Sbjct:   18 IAWPTVVLFAAAGLIYISATLAAIQGLIPSGVAIALNAIAAFWFFTVFHEASHNALS-EHKALNDWLGRISILPFSPAPIFRAFRFIHMQHHRFANQGRDKDPDGWCGG-GNAWTLPLRWATLDLNYYVFYLPKLKDRPRDERNETLLAIAFGVLLVALVVMSGYAMEALLYWFIPGRIAIVMLALAFDFLPHHPHQVSEQEDPYRATSNRVGM-----EWLLTPVLLYQNYHLVHHLYPRAPFYRYLKIWK 262          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_085260497.1 (electron transfer flavoprotein [Mycobacterium terrae] >ORW94157.1 electron transfer flavoprotein [Mycobacterium terrae] >SNV76730.1 electron transfer protein FdxB [Mycobacterium terrae])

HSP 1 Score: 172.6 bits (436), Expect = 2.200e-39
Identity = 102/280 (36.43%), Postives = 147/280 (52.50%), Query Frame = 0
Query:   44 IAWPTLILFAASLTTYLLPILLFHDN--PTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQ-APFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPL-IYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFGPLVSRRGGRE 320
            +AWPT+ LF  SL  +++  L +     P + T+PV A  T+TMFT +H+A H AIS   RWVN L G ++ L+      F ++ FIH+ HH+Y ND   DPD W A H P W  P  W    L Y     R I +RP  E AE V V  + ++ +   +  G  + L +   +P+ I    LA+ FD+ PHH  EA++  D Y  T    G+        L  PL + QNYH +HHL+P++PFY+Y   WR + +  LE    + + FG  ++    RE
Sbjct:   30 LAWPTVSLFTGSLVAFVISTLGYVQGWLPAWVTIPVNATVTFTMFTVLHDAIHYAIST-VRWVNGLFGRLAMLLIVPILSFPSYAFIHIEHHRYANDDDNDPDAW-ASHAPTWQAPARWALAELFYGKFLIRTIPNRPKAEVAETVFVLALSVVGLLVAIVTGYLWTLSVVFLIPQRIGMFFLAWWFDWMPHHGLEATQRSDRYQATRTRVGM------EWLFTPLMLSQNYHLVHHLHPSVPFYRYVKTWRRNEEAYLERDAAISTVFGQQLNSEEFRE 301          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: OIO11110.1 (hypothetical protein AUJ52_02665 [Elusimicrobia bacterium CG1_02_63_36] >PIP83186.1 delta(12)-fatty acid dehydrogenase [Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91] >PJA18327.1 delta(12)-fatty acid dehydrogenase [Elusimicrobia bacterium CG_4_10_14_0_2_um_filter_63_34] >PJB26772.1 delta(12)-fatty acid dehydrogenase [Elusimicrobia bacterium CG_4_9_14_3_um_filter_62_55])

HSP 1 Score: 172.2 bits (435), Expect = 2.900e-39
Identity = 100/268 (37.31%), Postives = 141/268 (52.61%), Query Frame = 0
Query:   39 LTNDP-IAWPTLILFAASLTTYLLPILLFHDNPTYWT-VPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPV 305
            +T+ P +AWPTL + A     + L   +       WT   + A+A +  FT MH+AAH ++S    W+N  +GH ++ +    PF  F+ +HL+HH++TN+P  DPD W AG G  W  P  W TQ LHYY  YF   SSRP  E    +L      ++   + + G  +  WI   +P  +    LA+SFDY PH PH     ED Y  + +I       D   LT   ++QNYH IHHL+P +PFY Y  +WR  ++ LL  GT V
Sbjct:   10 MTHTPDVAWPTLAVLAGVYALWGLGAWI-----GSWTGFAIVALAAFWAFTPMHDAAHGSVSRR-AWINGAVGHAAAFV-LNGPFACFKHLHLTHHRFTNEPGADPDFW-AGTGASWQLPLRWLTQELHYYAWYFARWSSRPRAERLSLILSLGTQAIAAVLVFTPGVLF-YWI---VPAKLASALLAFSFDYLPHRPHSVPAREDRYRASHVI-------DEPLLTPLFLFQNYHLIHHLHPGVPFYGYTALWRRQKEFLLSRGTRV 258          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_056895687.1 (MULTISPECIES: hypothetical protein [Nocardioides] >KRC53224.1 hypothetical protein ASE19_12745 [Nocardioides sp. Root79] >KRC70561.1 hypothetical protein ASE20_11590 [Nocardioides sp. Root240])

HSP 1 Score: 171.0 bits (432), Expect = 6.400e-39
Identity = 100/274 (36.50%), Postives = 150/274 (54.74%), Query Frame = 0
Query:   44 IAWPTLILFAASLTTYLLPIL--LFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAF---RFIHLSHHKYTNDPKK-DPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQL-WIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAM-IGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFG 310
            +AWPT+ L+ A+   + + +   L  D   + TVP+ A  T+ MF+ +HE+ H A+S   R +N L GH+S  + F  P+  +   +FIH+ HH+ TN+PK  DPD W    GP W  P  W T  L Y   Y R +  RP  E    V   LV+  +   L++ G G +L W+F+ +P+      L + FDY PHH    ++ ED Y  T + +GG     +G+ LT   +YQNYH +HHL+P+IPFY+Y   WR + +  L+    + +WFG
Sbjct:   33 VAWPTMGLYVATFVLFAIEVAARLAWDWTPWATVPMGAAVTFLMFSVLHESTHHAVSTNTR-LNNLAGHLS--VPFVVPWATYPLVKFIHIEHHRNTNEPKSVDPDGW-CEEGPWWQLPLRWATVDLWYVVFYLRRVRERPRAEVVATVATFLVVAAAFGGLVAAGYGNELVWLFL-VPQRFGVLVLGWWFDYLPHHGLTVTQREDKYRATRIRVGG-----EGL-LTPLFVYQNYHLVHHLHPSIPFYRYVRAWRRNEQAYLDRNAAISTWFG 295          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_085872305.1 (MULTISPECIES: hypothetical protein [Nocardioides] >GAW49823.1 Possible phthalate 4,5-dioxygenase [Nocardioides sp. PD653-B2] >GAW57135.1 Possible phthalate 4,5-dioxygenase [Nocardioides sp. PD653])

HSP 1 Score: 169.9 bits (429), Expect = 1.400e-38
Identity = 110/305 (36.07%), Postives = 161/305 (52.79%), Query Frame = 0
Query:   15 MTSTTRQREPSVKSRRVAMATHDELTNDPIAWPTLILFAASLTTYLL---PILLFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISS-LICFQAPFQAFRFIHLSHHKYTNDPK-KDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLL----SKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAM-IGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFG 310
            MT+ T  R P      + +    E T   +AWPT++LF  +L  +      +L    +P + TVP+ A  T+ MF+ +HEA H AIS + R +N   GH++   +   A F   +FIH+ HH+ TN+PK  DPD W++  GP W  PF W T  + Y   Y R +  RP  E    V+VTL   LSV+ +     + G  Y+L +   +P+ I    LA+ FDY PHH   A++ ED Y  T + +GG         LT   +YQNYH +HHL+P++PFY+Y   WR +    L+    + +WFG
Sbjct:    1 MTAPTIARNPEATQPVLGLPDPGE-TVPRLAWPTVLLFVGTLGLFAFEAWAVLAAQWSP-WRTVPIGAAVTFLMFSVLHEATHHAISTDTR-LNNAFGHLAQPFVAAYATFPLMQFIHIEHHRNTNEPKASDPDAWTS-EGPWWQLPFRWATIDVWYVAFYVRRLRERPRAE----VVVTLGTFLSVAAVFGAVAATGHLYELVVLYLVPQRIGLTILAWWFDYLPHHGLTATQREDKYRATRVRVGG------EAWLTPLFVYQNYHLVHHLHPSVPFYRYVRAWRRNETAYLDRDAAISTWFG 291          
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_029015331.1 (hypothetical protein [actinobacterium LLX17])

HSP 1 Score: 169.5 bits (428), Expect = 1.800e-38
Identity = 99/273 (36.26%), Postives = 150/273 (54.95%), Query Frame = 0
Query:   44 IAWPTLILFAASLTTYLLPIL-LFHDNPTYW-TVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAF---RFIHLSHHKYTNDPKK-DPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPL-IYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFG 310
            +AWPT  L+  +L  + + +L LF  + + W TVP+ A  T+ MF+ +HEA H AIS   R +N+  GH  + + F  P+  F   +++H+ HH+ TN+PK  DPD W+   GP W  PF W T  L Y   Y R +  RP  E    + V + +L + S +++ G G  L   + +P+ I    LA+ FDY PHH    ++ ED Y  T +  G      G  +  PL +YQNYH +HHL+P++PFY+Y   WR + +  L+    + +WFG
Sbjct:   33 LAWPTAALYVGTLALFAVEMLSLFAWDVSRWLTVPMGAAVTFLMFSVLHEATHHAISTHTR-LNDAFGH--AAVPFVVPWSTFSLVKYLHIEHHRNTNEPKSIDPDAWA--DGPLWQLPFRWATIDLWYLVFYVRRMPDRPRGEVTRVLAVFVGVLAAFSVIVATGHGAALLWGLLVPQRIGLVVLAWWFDYLPHHGLTTTQREDKYQATRIRVG------GEKVLTPLFLYQNYHLVHHLHPSVPFYRYVRAWRRNEEAYLDRNAAISTWFG 294          
The following BLAST results are available for this feature:
BLAST of NO05G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
AUX45106.12.300e-4439.93delta(12)-fatty acid dehydrogenase [Sorangium cell... [more]
WP_104983533.12.300e-4439.93delta(12)-fatty acid dehydrogenase [Sorangium cell... [more]
KYF71553.16.100e-4237.88delta(12)-fatty acid dehydrogenase [Sorangium cell... [more]
WP_051485701.16.800e-4138.60hypothetical protein [Nocardioides sp. J54][more]
PKM22075.17.500e-4039.29hypothetical protein CVV10_06170 [Gammaproteobacte... [more]
WP_085260497.12.200e-3936.43electron transfer flavoprotein [Mycobacterium terr... [more]
OIO11110.12.900e-3937.31hypothetical protein AUJ52_02665 [Elusimicrobia ba... [more]
WP_056895687.16.400e-3936.50MULTISPECIES: hypothetical protein [Nocardioides] ... [more]
WP_085872305.11.400e-3836.07MULTISPECIES: hypothetical protein [Nocardioides] ... [more]
WP_029015331.11.800e-3836.26hypothetical protein [actinobacterium LLX17][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003676NSK003676Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01930.2NO05G01930.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G01930.1NO05G01930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|392284gene_2985Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01930.2NO05G01930.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G01930.1NO05G01930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01930 ID=NO05G01930|Name=NO05G01930|organism=Nannochloropsis oceanica|type=gene|length=2992bp
ACCGACATCACATCGATCAACTCTGCCCTCCCGTACATGTATTCGCAAGG
TCAACCCTTGGGGCCAGCGCCACTTAAGGCAAGATCTGATGCCTTGTGCG
TCTGTTGGGATATCTGGTGGCATCTTTTGTGCCCCCCAAGCTTTTTGCAC
AGGACGCCAAGACTTCCACTGCCACTATGCGTCAAGACCATTACACTTCA
AGGTGTCCATTCCCAGAGCCCTCCTTTTTTGATCCATGCATCACACGATG
TGAGGACCGTTCTCTGTGGGTTCATCATTTTCAGCTTCATTTACTTGCCC
GTATTGTGCATCACTTGCGCCTGTATCATTCTTTAACGAGTTGGCAACTC
ATTCCCCCCCTCCCTGACATTCACCACCGCTCTAAGAAACATGCCATTTG
CCCTTAACGTATTACTTTCTCCTTACCACACCATACTTGACAGATGATCG
ATCCCGCTTGTCGGTCTTTCCTTCCATCTGCACCACAAGCAACCAACTAC
AGTCATGACACCACGCATTCTCTCTTCCGAGGACCTTGAACCCTCCATGA
CCTCGACCACACGCCAGCGAGAGCCCAGTGTCAAAAGCCGTCGGgtacgt
gctgtgtgtcttggcatgcgagtatccaattcctattcccatactgttct
tctgggctggtggggtacctgagggaaggcattttgattgtctcccccga
cccggactgggagttgtagccattttgtgtttttttcttgtaccatgctg
ccgctgggcttttttctcctcgtttctactgatcttgtttttcacatcgc
ccgttcacgttctttcccgccatgttctatcctatattcagGTGGCCATG
GCCACGCATGACGAGCTGACCAACGACCCCATCGCCTGGCCCACCCTCAT
CCTCTTCGCAGCCTCCCTCACTACCTACCTCCTCCCTATCCTCCTCTTCC
ACGACAATCCGACGTACTGGACCGTTCCTGTTACAGCGGTGGCGACATAT
ACCATGTTTACGGCCATGCACGAAGCGGCCCATCGGGCGATCTCGGCAGA
GTATCGATGGGTGAATGAGCTGATTGGACACATTTCCTCACTGATTTGTT
TCCAGGCGCCGTTTCAAGCATTTCGATTTATTCACTTGAGCCACCACAAG
TACACGAATGACCCCAAAAAAGACCCgtgagttaatgtgaaccattggaa
ccagaaggtggcgggagggtcggggggaaggtgtgtccatgtgtacggga
tctatgcacttttacactaaaattgttttcctccgtataaaactcgactc
catcatgctcagcattcctccctttctttcccccctctatcttcttcaaa
tcagCGATCATTGGTCAGCCGGACATGGCCCTGAGTGGGTTCAACCCTTT
TTCTGGTGCACACAAACCCTGCATTATTATTGGCGATACTTCCGTGACAT
CTCCTCCCGCCCCTTCGACGAGGCCGCCGAGGCCGTGCTCGTCACGCTCG
TCATCCTCCTGAGCGTGTCCTTCCTCCTTTCCAAAGGGTGCGGATACCAG
CTCTGGATCTTTGTGGGGCTTCCCCGAATGATAACTGACCCTTGCCTGGC
CTACTCGTTTGATTACGCGCCTCACCACCCCCACGAGGCCTCGCGGGCAG
AAGATGTGTATGGGTGCACGGCCATGATCGGTGGCTTGCTCTCTCCGGAC
GATGGCGTTGATCTGACGGTGCCCTTGATATATCAGAATTATCACAACAT
CCATCACCTGTACCCGACAATTCCCTTTTACAAGTACCCTCTTATGTGGC
GCAACCACCGGAAGATCTTGCTTGAGCTGGGAACACCGGTCGGGTCGTGG
TTTGGCCCGCTCGTGTCGAGAAGGGGGGGGAGGGAGCGAGGGGCAGGGAA
GGGAAAGAGGGTGGTTGAGGAGCAAGATCAGCAAAATAATTATCATGTGC
ATGCACAGTGAGGGGAAGGAAGAAGAAAGGAAGCGAGGAAGAAGAGTAAA
AACAGACTGCGTGTGCCTAAAGAGAGGGGAAAGAGAGCATGAAGGCCAAC
GTGAGCCTGAGTTAGAGTCTGGGTGGAGGGGAAAAAAGAGCAGCAAAGGC
CGGGACGGGGGAAATGTTGCAACTGTCATGTCACAGATTGTGCCCATGCG
TGCTCTTTTTGTGCAAGCGTGCGTCGAAATTGAAAACGACAAAGACAGAA
CCCGAGGATAGGCGAGAACAAGGAGGAAAGTGAGGAACACCAACAAGATA
GGCAAAGGGGCCTTGCTTAACATTTTGAAAGGACATACGTCTGACGCGTG
GGAGAAGGTGATGAGGCATCTATTTACACATACATCAGGGGGAGAATGGT
TTTGGGGGCCATCCATATTGGATTTTTTTCTTAATGGAAAAGAATGCAGC
TGCGAACCACGGGAGACATTCGCAGAAAGCTTCGAACCCTGTAGATCTGG
GTTTGATTCATCATACACACCCCTATAAATACGTACAGCATAAGGTCAAA
TCTCCCCTACAGGGACGAGCTCGAAGGGCGAAGGGAGGGGGGGAAAACGG
AGAGTAATTCGGAAAGAAGACGAAGGAAGAGGAGAAAAAAATTGAGCGAT
TTTTATCACACGAATGTATTGAGAGGTAGAGGGAAAAGATTGATAGTCAT
TTTTTGGGGAAGCGGGCTGAAGAGACCAAAGAAGAGGATTGTTATCTACG
TCTCTGACCGAAAAAGCGAGAAGAAACAGAGACAAGAGGAAGAAGTCCTA
AAGCAGAGGAAAGAAGTGTGGTAGAGACGGTAGCTACACTCCACCATTCA
TATGCCTGTGCAATCGAAGGGCACAGAACACAAAAAGTGTGAGGGAAAGG
ACCATCACAGAAGCGACGATGACACGTTTGGGATGTCTCAAGTTTCTCTT
CTATTCTAGTGCAAGTCAAAGACCGAGCAGCAGATGAATATATGTAAAGA
GACAAGACCCTTAAAAGAAAAACCAAACGCTCCTCCATGGGG
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protein sequence of NO05G01930.2

>NO05G01930.2-protein ID=NO05G01930.2-protein|Name=NO05G01930.2|organism=Nannochloropsis oceanica|type=polypeptide|length=241bp
MCTGSMHFYTKIVFLRIKLDSIMLSIPPFLSPLYLLQISDHWSAGHGPEW
VQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKG
CGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGL
LSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTP
VGSWFGPLVSRRGGRERGAGKGKRVVEEQDQQNNYHVHAQ*
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protein sequence of NO05G01930.1

>NO05G01930.1-protein ID=NO05G01930.1-protein|Name=NO05G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=344bp
MTPRILSSEDLEPSMTSTTRQREPSVKSRRVAMATHDELTNDPIAWPTLI
LFAASLTTYLLPILLFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAE
YRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHG
PEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLL
SKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMI
GGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLEL
GTPVGSWFGPLVSRRGGRERGAGKGKRVVEEQDQQNNYHVHAQ*
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Synonyms
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