NO05G01930, NO05G01930 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01930 vs. NCBI_GenBank
Match: AUX45106.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 189.1 bits (479), Expect = 2.300e-44 Identity = 107/268 (39.93%), Postives = 145/268 (54.10%), Query Frame = 0
Query: 39 LTNDPIAWPTLILFAASLTTYLLPILLFHDNPTYWTVPVT-----AVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELG 302
L PI WPT+ LF AS T + + T W PVT AVA Y +FT MHEA HR++ A +N +IG +S ++ APF A R H+ HHK+TN+ +DPDHWS G GP W+ P W TQ L+YY+ + R ++ E E V V L V+ G G + ++ P + LA++FDY PH+PH + A+D Y T + D V L QNYH IHHLYP +PFY+Y +W+ R+ LL+LG
Sbjct: 36 LQTRPIEWPTVALFGASYTLWAAAVAA---GLTGWVSPVTAVIAAAVAAYAVFTPMHEAGHRSL-ARSALLNGVIGRLSGVL-LMAPFLAVRHFHVEHHKHTNEADQDPDHWS-GRGPWWLLPLRWATQDLYYYYLFLRSYRAQKRGERIETVATMAVFLGLVALAFGLGYGEVVLLYWIAPARVAIFFLAFAFDYLPHYPHGVTAAQDRYRATRAV-------DSAIFNVLLFGQNYHLIHHLYPAVPFYRYRAVWKYQREELLKLG 290
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_104983533.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 189.1 bits (479), Expect = 2.300e-44 Identity = 107/268 (39.93%), Postives = 145/268 (54.10%), Query Frame = 0
Query: 39 LTNDPIAWPTLILFAASLTTYLLPILLFHDNPTYWTVPVT-----AVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELG 302
L PI WPT+ LF AS T + + T W PVT AVA Y +FT MHEA HR++ A +N +IG +S ++ APF A R H+ HHK+TN+ +DPDHWS G GP W+ P W TQ L+YY+ + R ++ E E V V L V+ G G + ++ P + LA++FDY PH+PH + A+D Y T + D V L QNYH IHHLYP +PFY+Y +W+ R+ LL+LG
Sbjct: 57 LQTRPIEWPTVALFGASYTLWAAAVAA---GLTGWVSPVTAVIAAAVAAYAVFTPMHEAGHRSL-ARSALLNGVIGRLSGVL-LMAPFLAVRHFHVEHHKHTNEADQDPDHWS-GRGPWWLLPLRWATQDLYYYYLFLRSYRAQKRGERIETVATMAVFLGLVALAFGLGYGEVVLLYWIAPARVAIFFLAFAFDYLPHYPHGVTAAQDRYRATRAV-------DSAIFNVLLFGQNYHLIHHLYPAVPFYRYRAVWKYQREELLKLG 311
BLAST of NO05G01930 vs. NCBI_GenBank
Match: KYF71553.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 181.0 bits (458), Expect = 6.100e-42 Identity = 100/264 (37.88%), Postives = 144/264 (54.55%), Query Frame = 0
Query: 39 LTNDPIAWPTLILFAASLTTYLLPIL--LFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLEL 301
L PI WPTL+LFA S + + + T V AVA Y +FT MHEAAHR++ A +N ++G ++ L+ APF A R H+ HHK+TN+ +DPDHWS G GP ++ P W TQ LHYY+ + R ++ E E V +L V+ G G ++ ++ +P + LA++FDY PH+PH + A+D Y T + D V L Q YH IHHLYP +PF++Y +W++ R+ LL L
Sbjct: 65 LQTRPIEWPTLVLFAGSYALWAAAVTAGVMGWVSTVPAVLAAAVAAYAVFTPMHEAAHRSL-ARSALLNGVVGRLAGLL-LMAPFLAVRHFHIEHHKHTNEADRDPDHWS-GRGPWYLLPLRWATQDLHYYYLFLRSYGAQKRSERIETVATLAAMLSLVALAFGLGFGERVVLYWIVPARLAIFFLAFAFDYLPHYPHGITAAQDRYRATRAV-------DSALFNVLLFGQTYHLIHHLYPAVPFFRYRTVWKHQREELLRL 318
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_051485701.1 (hypothetical protein [Nocardioides sp. J54]) HSP 1 Score: 177.6 bits (449), Expect = 6.800e-41 Identity = 105/272 (38.60%), Postives = 150/272 (55.15%), Query Frame = 0
Query: 44 IAWPTLILFAASLTTY---LLPILLFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHIS-SLICFQAPFQAFRFIHLSHHKYTNDPKK-DPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPL-IYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFG 310
+AWPTL L+ +L + L L + +P + TVP+ A T+ MF+ +HEA H AIS R VN+ +GH+S L+ A F +FIH+ HH+ TN+PK DPD W GP W PF W T + Y Y R I+ RP E +LV V+ + + + + G G++L +P+ I LA+ FDY PHH ++ ED Y T + G G L PL +YQNYH +HHL+P+IPFY+Y WR + + L+ + +WFG
Sbjct: 33 MAWPTLALYVGTLALFGIELAGALAWGWSP-WVTVPMGAAVTFLMFSVLHEATHHAISTNTR-VNDALGHLSVPLVVPWATFPLVKFIHIEHHRNTNEPKSIDPDKW-CDEGPAWQYPFRWATIDIWYIVYYLRRINDRPRREVVSVLLVFTVVAGAFAAVAAAGYGHELLWAWFIPQRIGIMFLAWWFDYLPHHGLTRTQREDRYQATRVRVG------GEALLTPLFVYQNYHLVHHLHPSIPFYRYVRAWRRNEQAYLDRNAAISTWFG 295
BLAST of NO05G01930 vs. NCBI_GenBank
Match: PKM22075.1 (hypothetical protein CVV10_06170 [Gammaproteobacteria bacterium HGW-Gammaproteobacteria-14]) HSP 1 Score: 174.1 bits (440), Expect = 7.500e-40 Identity = 99/252 (39.29%), Postives = 141/252 (55.95%), Query Frame = 0
Query: 44 IAWPTLILFAASLTTYLLPILLFHDN--PTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAP-FQAFRFIHLSHHKYTNDPK-KDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWR 292
IAWPT++LFAA+ Y+ L P+ + + A+A + FT HEA+H A+S E++ +N+ +G IS L AP F+AFRFIH+ HH++ N + KDPD W G G W P W T L+YY Y + RP DE E +L +L V+ ++ G + ++ +P I LA +FD+ PHHPH+ S ED Y T+ G+ LT L+YQNYH +HHLYP PFY+Y +W+
Sbjct: 18 IAWPTVVLFAAAGLIYISATLAAIQGLIPSGVAIALNAIAAFWFFTVFHEASHNALS-EHKALNDWLGRISILPFSPAPIFRAFRFIHMQHHRFANQGRDKDPDGWCGG-GNAWTLPLRWATLDLNYYVFYLPKLKDRPRDERNETLLAIAFGVLLVALVVMSGYAMEALLYWFIPGRIAIVMLALAFDFLPHHPHQVSEQEDPYRATSNRVGM-----EWLLTPVLLYQNYHLVHHLYPRAPFYRYLKIWK 262
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_085260497.1 (electron transfer flavoprotein [Mycobacterium terrae] >ORW94157.1 electron transfer flavoprotein [Mycobacterium terrae] >SNV76730.1 electron transfer protein FdxB [Mycobacterium terrae]) HSP 1 Score: 172.6 bits (436), Expect = 2.200e-39 Identity = 102/280 (36.43%), Postives = 147/280 (52.50%), Query Frame = 0
Query: 44 IAWPTLILFAASLTTYLLPILLFHDN--PTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQ-APFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPL-IYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFGPLVSRRGGRE 320
+AWPT+ LF SL +++ L + P + T+PV A T+TMFT +H+A H AIS RWVN L G ++ L+ F ++ FIH+ HH+Y ND DPD W A H P W P W L Y R I +RP E AE V V + ++ + + G + L + +P+ I LA+ FD+ PHH EA++ D Y T G+ L PL + QNYH +HHL+P++PFY+Y WR + + LE + + FG ++ RE
Sbjct: 30 LAWPTVSLFTGSLVAFVISTLGYVQGWLPAWVTIPVNATVTFTMFTVLHDAIHYAIST-VRWVNGLFGRLAMLLIVPILSFPSYAFIHIEHHRYANDDDNDPDAW-ASHAPTWQAPARWALAELFYGKFLIRTIPNRPKAEVAETVFVLALSVVGLLVAIVTGYLWTLSVVFLIPQRIGMFFLAWWFDWMPHHGLEATQRSDRYQATRTRVGM------EWLFTPLMLSQNYHLVHHLHPSVPFYRYVKTWRRNEEAYLERDAAISTVFGQQLNSEEFRE 301
BLAST of NO05G01930 vs. NCBI_GenBank
Match: OIO11110.1 (hypothetical protein AUJ52_02665 [Elusimicrobia bacterium CG1_02_63_36] >PIP83186.1 delta(12)-fatty acid dehydrogenase [Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91] >PJA18327.1 delta(12)-fatty acid dehydrogenase [Elusimicrobia bacterium CG_4_10_14_0_2_um_filter_63_34] >PJB26772.1 delta(12)-fatty acid dehydrogenase [Elusimicrobia bacterium CG_4_9_14_3_um_filter_62_55]) HSP 1 Score: 172.2 bits (435), Expect = 2.900e-39 Identity = 100/268 (37.31%), Postives = 141/268 (52.61%), Query Frame = 0
Query: 39 LTNDP-IAWPTLILFAASLTTYLLPILLFHDNPTYWT-VPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPV 305
+T+ P +AWPTL + A + L + WT + A+A + FT MH+AAH ++S W+N +GH ++ + PF F+ +HL+HH++TN+P DPD W AG G W P W TQ LHYY YF SSRP E +L ++ + + G + WI +P + LA+SFDY PH PH ED Y + +I D LT ++QNYH IHHL+P +PFY Y +WR ++ LL GT V
Sbjct: 10 MTHTPDVAWPTLAVLAGVYALWGLGAWI-----GSWTGFAIVALAAFWAFTPMHDAAHGSVSRR-AWINGAVGHAAAFV-LNGPFACFKHLHLTHHRFTNEPGADPDFW-AGTGASWQLPLRWLTQELHYYAWYFARWSSRPRAERLSLILSLGTQAIAAVLVFTPGVLF-YWI---VPAKLASALLAFSFDYLPHRPHSVPAREDRYRASHVI-------DEPLLTPLFLFQNYHLIHHLHPGVPFYGYTALWRRQKEFLLSRGTRV 258
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_056895687.1 (MULTISPECIES: hypothetical protein [Nocardioides] >KRC53224.1 hypothetical protein ASE19_12745 [Nocardioides sp. Root79] >KRC70561.1 hypothetical protein ASE20_11590 [Nocardioides sp. Root240]) HSP 1 Score: 171.0 bits (432), Expect = 6.400e-39 Identity = 100/274 (36.50%), Postives = 150/274 (54.74%), Query Frame = 0
Query: 44 IAWPTLILFAASLTTYLLPIL--LFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAF---RFIHLSHHKYTNDPKK-DPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQL-WIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAM-IGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFG 310
+AWPT+ L+ A+ + + + L D + TVP+ A T+ MF+ +HE+ H A+S R +N L GH+S + F P+ + +FIH+ HH+ TN+PK DPD W GP W P W T L Y Y R + RP E V LV+ + L++ G G +L W+F+ +P+ L + FDY PHH ++ ED Y T + +GG +G+ LT +YQNYH +HHL+P+IPFY+Y WR + + L+ + +WFG
Sbjct: 33 VAWPTMGLYVATFVLFAIEVAARLAWDWTPWATVPMGAAVTFLMFSVLHESTHHAVSTNTR-LNNLAGHLS--VPFVVPWATYPLVKFIHIEHHRNTNEPKSVDPDGW-CEEGPWWQLPLRWATVDLWYVVFYLRRVRERPRAEVVATVATFLVVAAAFGGLVAAGYGNELVWLFL-VPQRFGVLVLGWWFDYLPHHGLTVTQREDKYRATRIRVGG-----EGL-LTPLFVYQNYHLVHHLHPSIPFYRYVRAWRRNEQAYLDRNAAISTWFG 295
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_085872305.1 (MULTISPECIES: hypothetical protein [Nocardioides] >GAW49823.1 Possible phthalate 4,5-dioxygenase [Nocardioides sp. PD653-B2] >GAW57135.1 Possible phthalate 4,5-dioxygenase [Nocardioides sp. PD653]) HSP 1 Score: 169.9 bits (429), Expect = 1.400e-38 Identity = 110/305 (36.07%), Postives = 161/305 (52.79%), Query Frame = 0
Query: 15 MTSTTRQREPSVKSRRVAMATHDELTNDPIAWPTLILFAASLTTYLL---PILLFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISS-LICFQAPFQAFRFIHLSHHKYTNDPK-KDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLL----SKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAM-IGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFG 310
MT+ T R P + + E T +AWPT++LF +L + +L +P + TVP+ A T+ MF+ +HEA H AIS + R +N GH++ + A F +FIH+ HH+ TN+PK DPD W++ GP W PF W T + Y Y R + RP E V+VTL LSV+ + + G Y+L + +P+ I LA+ FDY PHH A++ ED Y T + +GG LT +YQNYH +HHL+P++PFY+Y WR + L+ + +WFG
Sbjct: 1 MTAPTIARNPEATQPVLGLPDPGE-TVPRLAWPTVLLFVGTLGLFAFEAWAVLAAQWSP-WRTVPIGAAVTFLMFSVLHEATHHAISTDTR-LNNAFGHLAQPFVAAYATFPLMQFIHIEHHRNTNEPKASDPDAWTS-EGPWWQLPFRWATIDVWYVAFYVRRLRERPRAE----VVVTLGTFLSVAAVFGAVAATGHLYELVVLYLVPQRIGLTILAWWFDYLPHHGLTATQREDKYRATRVRVGG------EAWLTPLFVYQNYHLVHHLHPSVPFYRYVRAWRRNETAYLDRDAAISTWFG 291
BLAST of NO05G01930 vs. NCBI_GenBank
Match: WP_029015331.1 (hypothetical protein [actinobacterium LLX17]) HSP 1 Score: 169.5 bits (428), Expect = 1.800e-38 Identity = 99/273 (36.26%), Postives = 150/273 (54.95%), Query Frame = 0
Query: 44 IAWPTLILFAASLTTYLLPIL-LFHDNPTYW-TVPVTAVATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAF---RFIHLSHHKYTNDPKK-DPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPL-IYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELGTPVGSWFG 310
+AWPT L+ +L + + +L LF + + W TVP+ A T+ MF+ +HEA H AIS R +N+ GH + + F P+ F +++H+ HH+ TN+PK DPD W+ GP W PF W T L Y Y R + RP E + V + +L + S +++ G G L + +P+ I LA+ FDY PHH ++ ED Y T + G G + PL +YQNYH +HHL+P++PFY+Y WR + + L+ + +WFG
Sbjct: 33 LAWPTAALYVGTLALFAVEMLSLFAWDVSRWLTVPMGAAVTFLMFSVLHEATHHAISTHTR-LNDAFGH--AAVPFVVPWSTFSLVKYLHIEHHRNTNEPKSIDPDAWA--DGPLWQLPFRWATIDLWYLVFYVRRMPDRPRGEVTRVLAVFVGVLAAFSVIVATGHGAALLWGLLVPQRIGLVVLAWWFDYLPHHGLTTTQREDKYQATRIRVG------GEKVLTPLFLYQNYHLVHHLHPSVPFYRYVRAWRRNEEAYLDRNAAISTWFG 294 The following BLAST results are available for this feature:
BLAST of NO05G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01930 ID=NO05G01930|Name=NO05G01930|organism=Nannochloropsis oceanica|type=gene|length=2992bpback to top protein sequence of NO05G01930.2 >NO05G01930.2-protein ID=NO05G01930.2-protein|Name=NO05G01930.2|organism=Nannochloropsis oceanica|type=polypeptide|length=241bpback to top protein sequence of NO05G01930.1 >NO05G01930.1-protein ID=NO05G01930.1-protein|Name=NO05G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=344bpback to top Synonyms
Publications
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