NO05G01920, NO05G01920 (gene) Nannochloropsis oceanica

Overview
NameNO05G01920
Unique NameNO05G01920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2254
Alignment locationchr5:523649..525902 +

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Properties
Property NameValue
DescriptionDdb1 and cul4-associated factor 7
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:523649..525902 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO05G01920 vs. NCBI_GenBank
Match: EWM28258.1 (ddb1 and cul4-associated factor 7 [Nannochloropsis gaditana])

HSP 1 Score: 614.8 bits (1584), Expect = 1.700e-172
Identity = 296/353 (83.85%), Postives = 315/353 (89.24%), Query Frame = 0
Query:    1 MGDSGGR-KKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDDG-FHKVTEFDHPYPATKVMWCPDREPVSPQRDLLATTGDYLRIWNCSGSEPKLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTALPGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            MGD     KKEIY+Y+T WLIFAMAWNQR +MS+RFRIALGS IEEYNNKIRIIER  SS SS          AN DG   +V EFDHPYPATK+MWCPDREPVSPQRDLLATTGDYLRIWN +  E KLEALLNNNKNSE+CAPLTSFDWNKDDPSLLGTACIDTTCTIWDVN QQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESP+L PLLRLAWN+QDPNYLA IMADS KT+LLDIRKPSSTVAELGEHQG VNSL+WAPHSACHICTCGEDRQALIWDL+ALPGP++SPILAY AQAE+N++EWFQQS ERNWV IGFDN+LQVLRV
Sbjct:   46 MGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSS----------ANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: XP_009034919.1 (hypothetical protein AURANDRAFT_52888 [Aureococcus anophagefferens] >EGB10088.1 hypothetical protein AURANDRAFT_52888 [Aureococcus anophagefferens])

HSP 1 Score: 450.3 bits (1157), Expect = 5.600e-123
Identity = 221/372 (59.41%), Postives = 270/372 (72.58%), Query Frame = 0
Query:    4 SGGRKKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPS---SISSSSSVDST---------PANANDD--GFHKVTEFDHPYPATKVMWCPDREPVSPQRDLLATTGDYLRIWNC----------SGSEPKLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTALPGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            S  +KKEIY++  DW I+AMAW+QR      FR+ALGS +EEY N++ I++R  +    + +    D T         P  A D    F  V EF+HPYPATK+MW PDR   + +RDLLATTGDYLR+W+           S S  ++ ALLNNNKNSEYCAPLTSFDWN  +PSL+GT+ IDTTCTIWD++    KTQ+IAHDKEVYDIAFARGKD+FASVGADGSVR+FDLR+L HSTIIYE+  L PLLRLAWNKQDPNYLAAI+AD  +T +LD+R PS  VAELG HQ  VNS+AWAPHS+CH+CTC +D QALIWDLTA+P P+D PILAY A AEVN ++W   +A   WVAI ++  +Q+L V
Sbjct:   18 SSAQKKEIYTHDADWTIYAMAWSQRDEPERGFRLALGSFVEEYANRVSIVQRRDAYEKCVGTGVGRDRTAAALQRAHNPGKAADSEAAFVTVGEFEHPYPATKIMWSPDR---TSRRDLLATTGDYLRVWSVPDQREASDAESASSVEMVALLNNNKNSEYCAPLTSFDWNDTEPSLVGTSSIDTTCTIWDLSVPAVKTQLIAHDKEVYDIAFARGKDIFASVGADGSVRLFDLRTLEHSTIIYETSSLRPLLRLAWNKQDPNYLAAILADDPRTVILDVRVPSIPVAELGAHQACVNSIAWAPHSSCHLCTCSDDNQALIWDLTAMPKPIDDPILAYTADAEVNQLQW--STAHHEWVAIAYNTTMQMLHV 384          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: OEU22296.1 (hypothetical protein FRACYDRAFT_179515 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 439.9 bits (1130), Expect = 7.500e-120
Identity = 210/355 (59.15%), Postives = 270/355 (76.06%), Query Frame = 0
Query:    2 GDSGGRKKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDD--GFHKVTEFDHPYPATKVMWCPDREPVSPQRDLLATTGDYLRIWNCS---GSEPKLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTALP-GPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLR 351
            G+S  ++KEIY+Y+  W I++++W++R + + +FR+A+GS +E+Y+N + II+++               +A+DD    ++  EFDHPYP TK+MW PD    S  +DLLATTGDYLRIWN S       K EALLNNNK SEYCAPLTSFDWN+ DPS++GT+ IDTT TIWDVNT  A+TQ+IAHD+EV+D+AFARGKD+FASVGADGSVRMFDLRSLV+STIIYESP+L PLLRL WNKQDPNY+A  M DS KT +LDIR PS  VAELG H G VN+ AWAPHS+CHICT G+D QALIWDL+ +P  PVD PILAY A  E+N ++W   +++ +WV+I FD++LQ+ +
Sbjct:    5 GNSQSQRKEIYTYKAPWPIYSLSWSRRPDPTSQFRLAIGSYLEQYSNVVSIIKKN---------------SASDDLGSLYQAAEFDHPYPCTKIMWSPDTRHGS--QDLLATTGDYLRIWNVSDDGSGTVKKEALLNNNKTSEYCAPLTSFDWNETDPSIIGTSSIDTTVTIWDVNTSTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLVNSTIIYESPDLEPLLRLEWNKQDPNYMATFMGDSKKTIILDIRVPSLPVAELGGHWGSVNATAWAPHSSCHICTAGDDSQALIWDLSTMPKRPVDDPILAYNADGEINNLQW--SASQPDWVSIAFDDKLQICK 340          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: XP_002182056.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46596.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 438.7 bits (1127), Expect = 1.700e-119
Identity = 208/352 (59.09%), Postives = 266/352 (75.57%), Query Frame = 0
Query:    8 KKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDDGFHKVTEFDHPYPATKVMWCPDREPVSPQRDLLATTGDYLRIWNC----SGS---EPKLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTAL-PGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            +KEIY+Y   W +F+MAW++R + + +FR+A+GS +E+Y+N ++I+++ P        VDS  A       ++   FDHPYP TK++W PD+   +P  DLLATTGDYLR+WN     SG    + K E LLNNNK SEYCAPLTSFDWN+ DP+++GT+ IDTTCTIWD+ TQ A+TQ+IAHD+EV+D+AFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP L PLLRL WNKQDPNYLA  M DS +T +LDIR PS  VAELG H G VN+ AWAPHS+CHICT G+D QALIWDL+A+   PV+ PILAY A  E+N ++W   +++ +WV+I F ++LQ+LRV
Sbjct:    5 RKEIYTYAAPWTVFSMAWSRRQDKTSQFRLAIGSYVEQYSNAVQIVKKVP------QHVDSDFAGGGSASLYQAGSFDHPYPCTKILWSPDQSLAAP--DLLATTGDYLRVWNIRDDGSGQGTVQCKKECLLNNNKTSEYCAPLTSFDWNEADPNIVGTSSIDTTCTIWDIETQTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDPLLRLEWNKQDPNYLATFMVDSRRTVILDIRVPSLPVAELGGHLGCVNATAWAPHSSCHICTAGDDSQALIWDLSAMSKRPVEEPILAYNASGEINNLQW--SASQPDWVSIAFHDKLQILRV 346          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: CEO95355.1 (hypothetical protein PBRA_004121 [Plasmodiophora brassicae])

HSP 1 Score: 434.9 bits (1117), Expect = 2.400e-118
Identity = 210/346 (60.69%), Postives = 255/346 (73.70%), Query Frame = 0
Query:    7 RKKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDDGFHKVTEFDHPYPATKVMWCPDREPVSPQRDLLATTGDYLRIWN-CSGSEPKLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTALPGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            +KKEIY+Y   W+++AM W+ RA  S +FR+A+GS IEEY NKI +I+                 N     F     FDHPYP+TK++W PD+  V    DLLATTGDYLR+W+         + LLNNNKNSE+CAPLTSFDWN+ DP+L+GT+ IDTTCTIW+V TQQA+TQ+IAHDKEVYDIAFA  +D+FASVGADGSVRMFDLRSL HSTIIYESP+L PLLRL WNKQD NYLA I+ D +K  +LDIR PS  VAEL  H   VNS+AWAPHS+CHICT G+D QALIWDL+ +P P+D PILAY A AEVNT++W   S++ +WV I FD +LQ+LRV
Sbjct:    7 KKKEIYTYDAPWVVYAMNWSVRA--SQKFRLAIGSFIEEYTNKIEVIQ----------------LNEEMGKFECTATFDHPYPSTKIIWAPDK--VGTGDDLLATTGDYLRLWSVAEDGSVSQKCLLNNNKNSEFCAPLTSFDWNETDPTLVGTSSIDTTCTIWNVETQQARTQLIAHDKEVYDIAFAPSQDVFASVGADGSVRMFDLRSLEHSTIIYESPDLVPLLRLGWNKQDHNYLATILMDQSKVVILDIRAPSLPVAELKGHSSCVNSIAWAPHSSCHICTAGDDSQALIWDLSQMPKPIDDPILAYTAAAEVNTLQW--SSSQPDWVGIAFDQKLQILRV 330          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: GAX29526.1 (WD repeat-containing protein 68 [Fistulifera solaris])

HSP 1 Score: 431.8 bits (1109), Expect = 2.000e-117
Identity = 205/353 (58.07%), Postives = 259/353 (73.37%), Query Frame = 0
Query:    1 MGDSGGRKKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDDGFHKVTEFDHPYPATKVMWCPDREPVSPQRDLLATTGDYLRIWNC-SGSEPKLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTAL-PGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            M +    +KEIY+Y   W ++++AW++R ++  +FR+A+GS +E+Y+N ++IIE+   S      + S          +K  EFDHPYP TK++W     P    RDLLATTGDYLR+W+   G  PK E LLNNNK SEYCAPLTSFDWN+ D +++GT+ IDTTCTIWD+  Q+AKTQ+IAHD+EV+DIAFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP L  LLRL WNKQDPNYLA  M DS +T +LDIR PS  VAELG H G VN+ AWAPHS+CHICT G+D QALIWDL+++   PV+ PILAY A  E+N + W   +A  +WV+I F ++LQ+LRV
Sbjct:    5 MDEGSAPRKEIYTYTAPWTVYSLAWSRRQDIRSQFRLAIGSYVEQYSNGVQIIEKQHRSADDDDGLTS---------LYKTGEFDHPYPCTKILW----SPAVNGRDLLATTGDYLRVWSVQEGMNPKKECLLNNNKTSEYCAPLTSFDWNETDHNIVGTSSIDTTCTIWDIEAQKAKTQLIAHDREVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDALLRLEWNKQDPNYLATFMVDSRRTIILDIRVPSIPVAELGGHMGCVNAAAWAPHSSCHICTVGDDNQALIWDLSSMSKRPVEDPILAYNAAGEINNLHW--SAARPDWVSIAFHDKLQILRV 342          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: GAX13467.1 (WD repeat-containing protein 68 [Fistulifera solaris])

HSP 1 Score: 431.8 bits (1109), Expect = 2.000e-117
Identity = 207/357 (57.98%), Postives = 261/357 (73.11%), Query Frame = 0
Query:    1 MGDSGGRKKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDD----GFHKVTEFDHPYPATKVMWCPDREPVSPQRDLLATTGDYLRIWNC-SGSEPKLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTAL-PGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            M +    +KEIY+Y   W ++++AW++R ++  +FR+A+GS +E+Y+N ++IIE+                NA+DD      +K  EFDHPYP TK++W     P    RDLLATTGDYLR+W+   G  PK E LLNNNK SEYCAPLTSFDWN+ D +++GT+ IDTTCTIWD+  Q+AKTQ+IAHD+EV+DIAFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP L  LLRL WNKQDPNYLA  M DS +T +LDIR PS  VAELG H G VN+ AWAPHS+CHICT G+D QALIWDL+++   PV+ PILAY A  E+N + W   +A  +WV+I F ++LQ+LRV
Sbjct:    5 MDEGSAPRKEIYTYTAPWTVYSLAWSRRQDIRSQFRLAIGSYVEQYSNGVQIIEKQ-------------HRNADDDDGLTSLYKTGEFDHPYPCTKILW----NPAVNGRDLLATTGDYLRVWSVQEGMNPKKECLLNNNKTSEYCAPLTSFDWNETDHNIVGTSSIDTTCTIWDIEAQKAKTQLIAHDREVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDALLRLEWNKQDPNYLATFMVDSRRTIILDIRVPSIPVAELGGHMGCVNAAAWAPHSSCHICTVGDDNQALIWDLSSMSKRPVEDPILAYNAAGEINNLHW--SAARPDWVSIAFHDKLQILRV 342          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: XP_002293429.1 (hypothetical protein THAPSDRAFT_42258 [Thalassiosira pseudonana CCMP1335] >EED89165.1 hypothetical protein THAPSDRAFT_42258 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 422.2 bits (1084), Expect = 1.600e-114
Identity = 206/367 (56.13%), Postives = 265/367 (72.21%), Query Frame = 0
Query:    3 DSGGRKKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDDGFHKVTEFDHPYPATKVMWCPDREPVSPQ--------RDLLATTGDYLRIWNCSGSEP--------KLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLT--ALPGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            +S  ++KEIY+Y+  W +F++AW+ R   + +FR+A+GS IE+YNN ++++ ++  S+   +S  ST         +   E +HPYP TK++W P+ +             RDLLATTGDYLRIW+ S  E         K E LLNNNKNSEYCAPLTSFDWN+ DPS++GT+ IDTTCTIWDVNTQ A+TQ+IAHD+EV+DIAF+RG D+FASVGADGSVRMFDLRSL HSTIIYE+P L PLLRL WNKQDPNYLA    DS  T +LD+R PS+ V EL  H G VN++AWAPHS+CHICT G+D QALIWDL+  A   PV+ PILAY A+ EVN ++W   S++ +WV+I F ++LQ+LRV
Sbjct:    2 ESPPQRKEIYTYKAPWTVFSLAWSHRLEPNSQFRLAIGSYIEQYNNTVQVL-KTRISLPHPTSEYSTVQ------IYSACEIEHPYPCTKILWSPEGKQQQHHQQGGNYGGRDLLATTGDYLRIWSVSEDESRGDGRLSHKREVLLNNNKNSEYCAPLTSFDWNEYDPSMIGTSSIDTTCTIWDVNTQTARTQLIAHDREVFDIAFSRGTDVFASVGADGSVRMFDLRSLEHSTIIYETPNLDPLLRLEWNKQDPNYLATFKVDSRSTLILDVRVPSTPVTELFGHNGCVNAVAWAPHSSCHICTAGDDSQALIWDLSKMAADRPVEDPILAYNAEGEVNNLQW--SSSQPDWVSIAFSDKLQILRV 359          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: EJK74659.1 (hypothetical protein THAOC_03653 [Thalassiosira oceanica])

HSP 1 Score: 421.8 bits (1083), Expect = 2.100e-114
Identity = 206/363 (56.75%), Postives = 265/363 (73.00%), Query Frame = 0
Query:    4 SGGRK---KEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDDGFHKVTEFDHPYPATKVMWCPD--REPVSPQ--RDLLATTGDYLRIWNCSGSEP-------KLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTAL-PGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            SGG K   KEIY+Y+  W +F++AW+ R   + +FR+A+GS IE+YNN ++I+ R+   +  +S   +          +   E +HPYP TK++W PD  +  V+ Q  RDLLATTGDYLR+W+ S  +        K E LLNNNKNSE+CAPLTSFDWN+ DPSL+GT+ IDTTCTIWDVNTQQA+TQ+IAHD+EV+D+AF+RGKD+FASVGADGSVR+FDLRSL HSTIIYE+P L PLLRL WN+QDPNYLA    DS  T +LDIR PS  V  LG H G VN++AWAPHS+CHICT  +D QALIWDL+ +   PV+ PILAY A+ EVN ++W   S++ +WV+I F  +LQ+LR+
Sbjct:    7 SGGEKSPRKEIYTYKAPWTVFSLAWSNRIEPNSQFRLAIGSYIEQYNNTVQIL-RTKYMLQPNSEFPTM-------SIYSACEIEHPYPCTKILWSPDGNKGGVANQGSRDLLATTGDYLRLWSVSDDDTSQGSLSHKRELLLNNNKNSEFCAPLTSFDWNESDPSLIGTSSIDTTCTIWDVNTQQARTQLIAHDREVFDLAFSRGKDVFASVGADGSVRLFDLRSLEHSTIIYETPNLEPLLRLEWNRQDPNYLATFKTDSHSTIILDIRVPSQPVTVLGGHAGCVNAVAWAPHSSCHICTAADDSQALIWDLSHMAKRPVEDPILAYGAEGEVNNLQW--SSSQPDWVSIAFKEKLQILRL 359          
BLAST of NO05G01920 vs. NCBI_GenBank
Match: XP_005833209.1 (hypothetical protein GUITHDRAFT_86758 [Guillardia theta CCMP2712] >EKX46229.1 hypothetical protein GUITHDRAFT_86758 [Guillardia theta CCMP2712])

HSP 1 Score: 420.2 bits (1079), Expect = 6.200e-114
Identity = 207/360 (57.50%), Postives = 259/360 (71.94%), Query Frame = 0
Query:    1 MGDSGGRKKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKIRIIERSPSSISSSSSVDSTPANANDDGFHKVTEFDHPYPATKVMWCPDREPVSPQRDLLATTGDYLRIW------NCSGSEPKLEALLNNNKNSEYCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYES---PELTPLLRLAWNKQDPNYLAAIMADSAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALIWDLTALPGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLRV 352
            MG++  +KKEI++Y+  W I+ M+W+ R +   RFRIA+GS IEEY+NK++II+                 N N   F +   FDHPYP TK+MW PD+  V  Q+DLLATTGDYLR+W      + S S   ++ LLNNNKNSE+CAPLTSFDWN  DPS++GT+ IDTTCTIW++ T QAKTQ+IAHDKEVYDIAFA G ++FASVGADGSVR+FDLRSL HSTIIYES   P+  PLLRLAWNKQD NYLA  M D+    +LDIR PS  VAEL  H+  VN++AWAPHS CHIC+ G+D  ALIWDL ALP  ++ PILAY A  E+N ++W   +++ +WVAIGF  Q+Q+LRV
Sbjct:    1 MGEA-SKKKEIFTYEAPWEIYGMSWSVRPD--KRFRIAVGSFIEEYSNKVQIIQ----------------LNENKGQFQETAIFDHPYPTTKIMWIPDK--VGTQKDLLATTGDYLRLWEVQSGASSSNSSVAMKKLLNNNKNSEFCAPLTSFDWNDTDPSIIGTSSIDTTCTIWNIETGQAKTQLIAHDKEVYDIAFACGTEVFASVGADGSVRLFDLRSLEHSTIIYESSTPPDAPPLLRLAWNKQDTNYLATFMMDNTSVVILDIRVPSLPVAELQGHEQSVNAIAWAPHSHCHICSAGDDAHALIWDLQALPRAIEDPILAYKAMGEINQLQW--SASQPDWVAIGFGQQMQILRV 337          
The following BLAST results are available for this feature:
BLAST of NO05G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28258.11.700e-17283.85ddb1 and cul4-associated factor 7 [Nannochloropsis... [more]
XP_009034919.15.600e-12359.41hypothetical protein AURANDRAFT_52888 [Aureococcus... [more]
OEU22296.17.500e-12059.15hypothetical protein FRACYDRAFT_179515 [Fragilario... [more]
XP_002182056.11.700e-11959.09predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CEO95355.12.400e-11860.69hypothetical protein PBRA_004121 [Plasmodiophora b... [more]
GAX29526.12.000e-11758.07WD repeat-containing protein 68 [Fistulifera solar... [more]
GAX13467.12.000e-11757.98WD repeat-containing protein 68 [Fistulifera solar... [more]
XP_002293429.11.600e-11456.13hypothetical protein THAPSDRAFT_42258 [Thalassiosi... [more]
EJK74659.12.100e-11456.75hypothetical protein THAOC_03653 [Thalassiosira oc... [more]
XP_005833209.16.200e-11457.50hypothetical protein GUITHDRAFT_86758 [Guillardia ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003677NSK003677Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01920.1NO05G01920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100004g117gene2368Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01920.1NO05G01920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01920 ID=NO05G01920|Name=NO05G01920|organism=Nannochloropsis oceanica|type=gene|length=2254bp
CAAAAGGTTAGGGCGGGGGCAGAGGACGCAGGAGGTTGTTGCATCATCCG
GCTACATCATGGGCGTGCTGTTGTGTGCTGTTGTGCAATGCTTTTAGCGG
CACTTAGCTTAGCGGTCCCTTGTGACACAGCCTGTAGGGTTTCTTGATTA
CGCTCATGGCCTTGTACTCACCAGTTACAGCTCCCTTTCGTCTCACAATC
CTTTTACACTTGCCCTCCAACTCTGTACATGCAGGCGACATAATCAAGCC
GAAGCCGTTGCCGGAGTCGCTGGACACAAACGAGCGACGCTTCTACAAGC
GCAAGGTCATACACCACGATAAATATGGGGGACAGCGGCGGCAGAAAGAA
GGAGgtgagtcctgggagggtgtattgcgggcggaagtcaagtattagga
tggtaaggggaggaagtgcttgtctacgtgtcatttcatacgcggcctct
gagcatggtgggatagaatgtggagtgcagctcgtggtggtatgtggatg
tcttgggctcgtgcatgtgtattaaatgcatgcttgcagtgccttgcttg
taatagagtgagagtgcgtgatctggatggggataggtgtgcttgcacgg
ctctttgctcctagtcttggggcgacaggtcacaattgacgtgagggaag
gccttattggctgtgtgttgggcgtaaccgccatttgtctgttcctcttt
gtgctctttcgatgtgttcaagtcccgctattcggaatctaccacattcc
cttatctctctgtctctttcacctccttccctcctttccctccctccttc
ccccacagATCTATTCCTATCAGACCGATTGGCTTATCTTTGCCATGGCC
TGGAACCAACGCGCAAATATGTCCGACCGCTTCCGCATTGCTCTCGGCTC
CTGCATCGAAGAATACAACAACAAAATACGAATCATTGAACGCAGCCCCT
CCTCCATTTCCTCCTCCTCCTCCGTCGACTCCACCCCTGCCAACGCCAAC
GACGACGGTTTTCATAAAGTAACGGAATTCGATCATCCTTACCCTGCGAC
TAAGGTGATGTGGTGTCCCGACCGAGAGCCTGTCAGCCCTCAACGGGACC
TGCTGGCCACAACGGGCGATTACTTAAGGATATGGAATTGCAGTGGATCG
GAACCCAAGCTGGAGGCGTTGCTGAACAATgtgagtgtccgagaagtggg
ttagggaggaaaggcgaggatgcagtcaagttttgtctgcttattctatg
tcggcgaacaagttttatgacatttccattcctttctcgcatctcttagA
ATAAGAACAGCGAGTACTGCGCCCCCCTCACCTCCTTCGACTGGAACAAG
GACGACCCTTCCTTACTCGGGACGGCGTGCATTGACACCACCTGCACGAT
TTGGGACGTGAACACGCAGCAGGCCAAGACCCAGATTATTGCTCACGATA
AGGAGGTCTATGATATTGgtgaggaaagaggggaaggagggagggaaaga
gggccgaggcggcttcaatggtgtagcagtaccacctttaactccaaccc
ctcccctttttccttccctccagCCTTCGCCCGTGGCAAGGATCTGTTCG
CTTCCGTCGGCGCAGACGGCTCCGTGCGTATGTTCGACCTCCGCTCCCTC
GTCCACTCCACCATCATCTACGAATCACCCGAGCTGACTCCCCTCCTCCG
CCTGGCATGGAACAAACAAGACCCGAATTACCTCGCGGCCATCATGGCGG
ACAGCGCTAAAACTTTTCTGCTTGACATCCGGAAGCCCTCCTCGACCGTC
GCCGAGCTCGGAGAGCATCAAGGCCCTGTTAATTCCCTCGCCTGGGCACC
GCATTCTGCTTGCCATATCTGCACGTGCGGCGAAGACAGACAAGCATTGA
TCTGGGACCTCACTGCGCTGCCGGGGCCGGTAGACAGTCCGATTCTGGCA
TACGCGGCGCAGGCGGAGGTAAACACTGTGGAGTGGTTTCAGCAGAGCGC
TGAGAGGAATTGGGTGGCGATTGGATTTGACAACCAGTTGCAGGTTTTGC
GGGTGTAAGGCGGGAGGGATGGAAAAAGGGAGGGAGGAAGAGATGGGCTG
TATAATGGATGAGATGGAGGGATGGAGAGGTGTAACAGTATGGATGTCGG
GGCCTTGTCTTTCTTTTGTGTCTGTGGAAGGGGAAAAGGAATGTAGGACG
GAGTGGGAGGCAGCGAATGAAAGAGACGCGATCCTTGTCTTAGGGGGCGG
GGGG
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protein sequence of NO05G01920.1

>NO05G01920.1-protein ID=NO05G01920.1-protein|Name=NO05G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
MGDSGGRKKEIYSYQTDWLIFAMAWNQRANMSDRFRIALGSCIEEYNNKI
RIIERSPSSISSSSSVDSTPANANDDGFHKVTEFDHPYPATKVMWCPDRE
PVSPQRDLLATTGDYLRIWNCSGSEPKLEALLNNNKNSEYCAPLTSFDWN
KDDPSLLGTACIDTTCTIWDVNTQQAKTQIIAHDKEVYDIAFARGKDLFA
SVGADGSVRMFDLRSLVHSTIIYESPELTPLLRLAWNKQDPNYLAAIMAD
SAKTFLLDIRKPSSTVAELGEHQGPVNSLAWAPHSACHICTCGEDRQALI
WDLTALPGPVDSPILAYAAQAEVNTVEWFQQSAERNWVAIGFDNQLQVLR
V*
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Synonyms
Publications