NO05G00890, NO05G00890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00890 vs. NCBI_GenBank
Match: XP_005852445.1 (hypothetical protein NGA_0680300, partial [Nannochloropsis gaditana CCMP526] >EKU23386.1 hypothetical protein NGA_0680300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 174.1 bits (440), Expect = 1.600e-39 Identity = 117/255 (45.88%), Postives = 140/255 (54.90%), Query Frame = 0 Query: 1 MGKAKKARALRNARHDPLGLGGSPAAAARGATMSSPAAGRACMGQKQQYKAQKLLEDLRSPDLIRKEAAVMAMAQLLAVGDSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRFRALIHKLVDGGAVPLLMERMFDTSSAVTLHAAGALRNMASLHDPRLATQMIKEDVFTALLGLLDKVGQGGFEAAPLITQILGTMAGLCETSEVAGQVLSRHQGLEALLDVMGTYVEEM--------EREGRKDGEVEEG 248 MGKAKKARA R+ARHDP+G P+ ++ + LLE+LRSPDL RKEAAV+AMAQLLA GD ++RFRALIHKLVDGGAV LLMERMFDT+S V LH AGALRNMASL D R+ +QM++ V TA+LGLL K + + TQ LG + +CE E A Q L R +GL +L VM TYV M REG + G E G Sbjct: 1 MGKAKKARASRHARHDPVGF---PSGRTARSSSCADTEQXXXXXXXXXXXXXXLLEELRSPDLARKEAAVVAMAQLLAAGD-----VDGDEEVAGLNGNERADRGPMRASKGSARFRALIHKLVDGGAVDLLMERMFDTASTVRLHGAGALRNMASLRDRRVTSQMVQAGVLTAVLGLLQKQEKEIIRDTAITTQGLGVLVAVCEGREAAKQCLVRQEGLRLVLAVMRTYVGAMGTKGEGTRHREGMQAGTGEAG 247
BLAST of NO05G00890 vs. NCBI_GenBank
Match: EWM28278.1 (hypothetical protein Naga_100004g16 [Nannochloropsis gaditana]) HSP 1 Score: 134.0 bits (336), Expect = 1.900e-27 Identity = 75/124 (60.48%), Postives = 90/124 (72.58%), Query Frame = 0 Query: 619 MVRTSPYFEVRVNAAAILGCLCPPSSSFSLVSSVGATLKEALLTETHVLGEAAVLNAIMDLFSDDDQERDRIFQKHLGFLTVLKEVLPAFRLKCKVEAGKHGKDAVGHVKETALNTARFIKYKE 743 M++ + FEVRVN A +LG CP ++ VG LKEAL TETHVL A++LNA+MDLF D E D +FQ+ L L +L +VLPAFRLK K EAGKHG+DAVGHVKETALN ARFIKYK+ Sbjct: 1 MLQRNSSFEVRVNVAGLLGGCCPVGAA----PRVGKVLKEALGTETHVLASASLLNALMDLFGRD--ELDAVFQE-LKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 117
BLAST of NO05G00890 vs. NCBI_GenBank
Match: EWM28215.1 (hypothetical protein Naga_100004g17 [Nannochloropsis gaditana]) HSP 1 Score: 111.3 bits (277), Expect = 1.300e-20 Identity = 74/152 (48.68%), Postives = 85/152 (55.92%), Query Frame = 0 Query: 1 MGKAKKARALRNARHDPLGLGGSPAAAARGATMSSPAAGRACMGQKQQYKAQKLLEDLRSPDLIRKEAAVMAMAQLLAVGDSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRFRALIHKLVDGGAVPLLMERMFDTSSAVTLHAAGALR 153 MGKAKKARA R+ARHDP+G P+ ++ + LLE+LRSPDL RKEAAV+AMAQLLA GD ++RFRALIHKLVDGGAV LLMERMFDT+S V LH AGALR Sbjct: 1 MGKAKKARASRHARHDPVGF---PSGRTARSSSCADTEQXXXXXXXXXXXXXXLLEELRSPDLARKEAAVVAMAQLLAAGD-----VDGDEEVAGLNGNERADRGPMRASKGSARFRALIHKLVDGGAVDLLMERMFDTASTVRLHGAGALR 144
BLAST of NO05G00890 vs. NCBI_GenBank
Match: XP_005853697.1 (armadillo repeat-containing protein [Nannochloropsis gaditana CCMP526] >EKU22668.1 armadillo repeat-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 87.8 bits (216), Expect = 1.500e-13 Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 0 Query: 677 MDLFSDDDQERDRIFQKHLGFLTVLKEVLPAFRLKCKVEAGKHGKDAVGHVKETALNTARFIKYKEK 744 MDLF D E D +FQ+ L L +L +VLPAFRLK K EAGKHG+DAVGHVKETALN ARFIKYK++ Sbjct: 1 MDLFGRD--ELDAVFQE-LKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQR 64
BLAST of NO05G00890 vs. NCBI_GenBank
Match: CBJ28385.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.1 bits (183), Expect = 1.000e-9 Identity = 74/262 (28.24%), Postives = 105/262 (40.08%), Query Frame = 0 Query: 515 IPIPLIRQVLELRSRALLVLGGLLTEMPSSMIETEGAAAWTALLEMGEEGMEEERRGHAPWYCRGEEPCLGLLTGVMCAFVRRRG--------------------QGGTEGGRAGGKEVELLARMV--RTSPYFEVRVNAAAILGCLCPPSSSFSLVS------------SVGATLKEALLTETHVLGEAAVLNAIMDLFSDDDQERDRIFQKHLGFLTVLKEVLPAFRLKCKVEAGKHGKDAVGHVKETALNTARFIKYKE 743 +P + + +LR+ L L+ +P+ + A W L M E E AP C+ +TGVM VRR G + L+ R+ + FE RVNA +LG L +G L +A + + HVL +A LNA+MD++ DD D F+ G L +PAFR K K E G+DA+ H+KETALN RF+KYK+ Sbjct: 555 LPAGVAGDLADLRATVALCAANLVQNLPAKALGENPHALWAELCGMCEAATE-----RAP-------SCVETVTGVMWGLVRRAGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXSADPLPLILRLCDPAVTRAFEARVNAVGMLGALGSAXXXXXXXXXXXXXXXXXTDLGLGRALVQA-MEDPHVLVQAEALNAVMDVYGDDG--LDAAFRAS-GAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQ 800
BLAST of NO05G00890 vs. NCBI_GenBank
Match: GAY02281.1 (Hypothetical protein PINS_010105 [Pythium insidiosum]) HSP 1 Score: 70.1 bits (170), Expect = 3.300e-8 Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 0 Query: 588 TGVMCAFVRRRGQGGTEGGRAGGKEVELLARMVRTSPYFEVRVNAAAILGCLCPPSSSFSLVSSVGATLKEALL-TETHVLGEAAVLNAIMDLFSDDDQERDRIFQKHLGFLTVLKEVLPAFRLKCKVEAGKHGKDAVGHVKETALNTARFIKYKEKTL 746 T M + +RR G ++ ELL S + R+N +LGC+ S + + +G L +L V+ EA LNA+ D++ D++ D F + LGFL L+ A + K + E + +D V HVKET LN ARFIKYK+K L Sbjct: 498 TSAMWSVLRRAG-AEKRPMPIAAEDAELLMHGALQSASVDTRLNTIGMLGCVGQQSRDANENAVIGRCLLSSLSDASLEVVTEA--LNAVFDVYG--DEQFDAAFAQ-LGFLPALESTAAAVKAKLRAEQRQLDRDLVAHVKETQLNLARFIKYKKKHL 650
BLAST of NO05G00890 vs. NCBI_GenBank
Match: XP_009515834.1 (hypothetical protein PHYSODRAFT_552294 [Phytophthora sojae] >EGZ28559.1 hypothetical protein PHYSODRAFT_552294 [Phytophthora sojae]) HSP 1 Score: 67.4 bits (163), Expect = 2.100e-7 Identity = 47/119 (39.50%), Postives = 66/119 (55.46%), Query Frame = 0 Query: 627 EVRVNAAAILGCLCPPSSSFSLVSSVGATLKEALLTETHVLGEAAVLNAIMDLFSDDDQERDRIFQKHLGFLTVLKEVLPAFRLKCKVEAGKHGKDAVGHVKETALNTARFIKYKEKTL 746 E R+NA ++GC+ SS + +VG L + L ++ + A LNAI D++ DD+E D F L FL+ L+ A + K K E + + V HVKET LN RFIKYK+K L Sbjct: 107 ESRLNAIGMIGCVGKRCSSAAEKEAVGRAL-VSRLDDSSLEVVAETLNAIFDVY--DDEEFDNTFCA-LNFLSALERTSSALKAKLKAEQKQLDRALVAHVKETRLNLLRFIKYKKKHL 221
BLAST of NO05G00890 vs. NCBI_GenBank
Match: XP_009831747.1 (hypothetical protein H257_07801 [Aphanomyces astaci] >ETV79028.1 hypothetical protein H257_07801 [Aphanomyces astaci]) HSP 1 Score: 66.6 bits (161), Expect = 3.700e-7 Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 0 Query: 621 RTSPYFEVRVNAAAILGCLCPPSSSFSLVSSVGATLKEALLTETHVLGEAAVLNAIMDLFSDDDQERDRIFQKHLGFLTVLKEVLPAFRLKCKVEAGKHGKDAVGHVKETALNTARFIKYKEKTL 746 + SP E R +A +LG L + S + V A A+L +T + VLNA+ D+++ D++ D +F + + FLT L+ V + K K EA ++ V H KET LN RFIKYK++ L Sbjct: 546 QASPSVEARTSAVRLLGTLGKKAHSLP-ENKVLAVCLSAVLRDTDLAVVCEVLNALFDIYA--DEQYDSVFHE-VKFLTSLEHVGAGMKSKIKSEAKSLDRELVAHAKETRLNLLRFIKYKKQHL 666
BLAST of NO05G00890 vs. NCBI_GenBank
Match: ETI43644.1 (hypothetical protein F443_11471 [Phytophthora parasitica P1569] >ETI43656.1 hypothetical protein F443_11467 [Phytophthora parasitica P1569]) HSP 1 Score: 66.2 bits (160), Expect = 4.800e-7 Identity = 47/119 (39.50%), Postives = 67/119 (56.30%), Query Frame = 0 Query: 627 EVRVNAAAILGCLCPPSSSFSLVSSVGATLKEALLTETHVLGEAAVLNAIMDLFSDDDQERDRIFQKHLGFLTVLKEVLPAFRLKCKVEAGKHGKDAVGHVKETALNTARFIKYKEKTL 746 E R+NA ++GC+ SS + +VG L + L ++++ A LNAI D++ DD+E D F L FL+ L+ A + K K E + + V HVKET LN RFIKYK+K L Sbjct: 542 ESRLNAIGMIGCVGKRCSSPAEKEAVGRAL-VSRLDDSNLEVVAETLNAIFDVY--DDEEFDDTFCA-LNFLSALERTSSALKSKLKAEQKQLDRALVAHVKETRLNLLRFIKYKKKHL 656
BLAST of NO05G00890 vs. NCBI_GenBank
Match: ETL90301.1 (hypothetical protein L917_10963 [Phytophthora parasitica]) HSP 1 Score: 66.2 bits (160), Expect = 4.800e-7 Identity = 47/119 (39.50%), Postives = 67/119 (56.30%), Query Frame = 0 Query: 627 EVRVNAAAILGCLCPPSSSFSLVSSVGATLKEALLTETHVLGEAAVLNAIMDLFSDDDQERDRIFQKHLGFLTVLKEVLPAFRLKCKVEAGKHGKDAVGHVKETALNTARFIKYKEKTL 746 E R+NA ++GC+ SS + +VG L + L ++++ A LNAI D++ DD+E D F L FL+ L+ A + K K E + + V HVKET LN RFIKYK+K L Sbjct: 542 ESRLNAIGMIGCVGKRCSSPAEKEAVGRAL-VSRLDDSNLEVVAETLNAIFDVY--DDEEFDDTFCA-LNFLSALERTSSALKSKLKAEQKQLDRALVAHVKETRLNLLRFIKYKKKHL 656 The following BLAST results are available for this feature:
BLAST of NO05G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00890 ID=NO05G00890|Name=NO05G00890|organism=Nannochloropsis oceanica|type=gene|length=3081bpback to top protein sequence of NO05G00890.1 >NO05G00890.1-protein ID=NO05G00890.1-protein|Name=NO05G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=746bpback to top Synonyms
Publications
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