NO05G00550, NO05G00550 (gene) Nannochloropsis oceanica

Overview
NameNO05G00550
Unique NameNO05G00550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1557
Alignment locationchr5:191369..192925 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:191369..192925 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
Homology
BLAST of NO05G00550 vs. NCBI_GenBank
Match: EWM28336.1 (hypothetical protein Naga_100109g12 [Nannochloropsis gaditana])

HSP 1 Score: 547.4 bits (1409), Expect = 4.500e-152
Identity = 289/459 (62.96%), Postives = 339/459 (73.86%), Query Frame = 0
Query:   34 PCPPC--RRHHIPILMSGN----NDYGGDDPFAIRILQPNQLRIIRVIGEQRLTIEEETEKRDGSGPRGAFGRIRNKKS-TEGQSQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATK---------GWLGKLL---FPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMANVERLMMGEERGVYGVGERLLGSGFFD 474
            PC P   RR   P+ +S N    N    DDPF I +L+PNQLRI+R IGEQRLT+EEETE RDG+GPRGAFGRIRNKKS TE  +Q  REM+ MGVG RLFEAVD++TG+ L++KEFLPMM+NVAMGEVELYRYL+ W + N P+W PSD+P+VP HGYL TGPEVEDPSFV  W +RFG S+PPP+ GN WV +R   L+ LTS+PRLAL       G A K         GW G+L     PD    R+AYLKN+  G+I A+SLLH+AGV HGA+SPST+LVSTADLREGGREGGMEVWLS+LGFA NVLSQ  +DFEGLVKRDWKGCSY+LLEVFLRL+AE                   LG++EEGF LPFAQV AG LQ VTE RF GDV VGLR LV+NER +++AV CLD +GGAGWVLL+DMAN  RL + +E GVYGVG RLL S F++
Sbjct:   70 PCRPISRRRPRRPLALSANDYDENRRKTDDPFTIPVLEPNQLRIVRPIGEQRLTVEEETETRDGAGPRGAFGRIRNKKSRTEQPAQIRREMRNMGVGARLFEAVDTRTGQALVLKEFLPMMKNVAMGEVELYRYLYDWTRRNQPAWLPSDLPLVPLHGYLTTGPEVEDPSFVQAWRDRFGPSLPPPVPGNVWVAVRAARLLPLTSVPRLAL-------GDAEKFPLASPGGAGWWGRLWGKGGPD----RVAYLKNVFEGSITAVSLLHQAGVVHGAVSPSTILVSTADLREGGREGGMEVWLSELGFATNVLSQGTLDFEGLVKRDWKGCSYALLEVFLRLLAE--------EXXXXXXXXXXLGKYEEGFTLPFAQVEAGGLQAVTEERFKGDVSVGLRSLVNNERAYQQAVACLDAKGGAGWVLLHDMANAGRL-VAQEGGVYGVGPRLLASSFWE 508          
BLAST of NO05G00550 vs. NCBI_GenBank
Match: CBN77912.1 (ATP binding protein, putative [Ectocarpus siliculosus])

HSP 1 Score: 108.2 bits (269), Expect = 7.000e-20
Identity = 110/396 (27.78%), Postives = 164/396 (41.41%), Query Frame = 0
Query:   61 IRILQPNQLRIIRVIGEQRLTIEEETEKRDGSGPRGAFGRIRNKKSTEGQSQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELY-RYLHHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCS--------------YSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVL 442
            +R  + ++L++ R IGE  L   E T+                + S    S  SR + + G  VRLFEA  +    ++++KEFLP    +A  E+E+  R    W Q N P  +P   P++   G L      +   F+  W  +F  S+P P  G+ W+V R  GL T  S P    E E       T             K R  ++K +M GA +AL+ +HE+GV H +L  S+L V+T D R   +   +EV LSD GFA  +    ++D E + +    G +              YSL  VFL L+            +                          SL+ + E  F GD     +     E V++ AVE LD + G+GW L
Sbjct:   72 LRTFEASELQLQRFIGE--LGFVEITD-----------WEYNRQTSPVDPSTPSRTLNSSGTTVRLFEA-RTYGNAKVVLKEFLPKGLKLAYREIEINDRLQDAWDQKNGPGGRP---PVLALMGSLVADESFKSRRFLEQWVSKF-PSLPVPAIGSVWLVYRWEGLYTFASFPPAKQESEFFDAFNPTSR----------TKRRATFVKEMMRGAANALAFMHESGVVHRSLGASSLRVNTLDERYPRQ---LEVLLSDFGFATRL---SEIDDETIRRASSAGATSPLAVSDFLFREDLYSLGYVFLELVFGAFCDDKSKRPD------------------------QNSLKRLLEDIFKGDF-KAFKDYCLTEPVWEPAVEVLDADRGSGWGL 408          
BLAST of NO05G00550 vs. NCBI_GenBank
Match: CEM23152.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 89.4 bits (220), Expect = 3.400e-14
Identity = 99/387 (25.58%), Postives = 161/387 (41.60%), Query Frame = 0
Query:  112 QTSREMKTMGVGVRLFEAVDSQT---GERLIMKEFLPMMRNVAMGEVELYRYL--HHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFG-SSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDV-YKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWK----------------GCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGV---TEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMANVERLMM---------GEERGVYGVG 464
            QT+ E   M   VRLF+A    T   G  +++KE+    R++A  E+++Y  +   +  +        S  P+VP  G ++  P +    F   W  +    +VPPP  GN W VL+ PG +T  +  RL         G+  +  +   + P    K +  +LK  +  A++A+  LH+  + H ++SP + ++  A+ RE      ++V + D GFA  +    + D +  V+R  K                    S +     ++A          G+G GG + G  R E   G  F Q +  S   V    E  F GD+  GLR    N+  F   V+ LD+   AGW  L+ +    +L           G ER + G G
Sbjct:  109 QTTDESSAM---VRLFQARLIPTGLPGYPVLLKEYATDARHLAETELDIYGEIIEDYNARKGLSEKAVSFPPVVPGLGRVEADPYLGTNEFQEQWKRQVAFRNVPPPRPGNIWTVLQWPGPLTFDTYDRL---------GRGERDDVLDGVVPGFRLKRKSRFLKMAIRRALEAIDYLHQLRIVHRSISPGSFVLQDANERE---PLNVKVLIQDFGFATTLQRLARSDDDDSVRRAMKVGAVTPAAILDYLKAEDLKSSCVTFLYFIVANLYDEAAAKRGQGKGGSDTGNKRMELTPG-GFRQTSPRSFLAVRRLVEEVFDGDMS-GLRDYWLNDEPFADVVKFLDQNDMAGWDFLSRLYKAPQLFQQQVKDTQQRGGEREISGDG 478          
BLAST of NO05G00550 vs. NCBI_GenBank
Match: XP_005787976.1 (hypothetical protein EMIHUDRAFT_462482 [Emiliania huxleyi CCMP1516] >EOD35547.1 hypothetical protein EMIHUDRAFT_462482 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 82.4 bits (202), Expect = 4.100e-12
Identity = 106/409 (25.92%), Postives = 151/409 (36.92%), Query Frame = 0
Query:   54 GGDDPFAIRILQPNQLRIIRVIGEQRLTIEEETEKRDGSGPRGAFGRIRNKKSTEGQSQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKN--VLSQEKVD-------------FEGLVKRDWKGCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMAN 448
            GGD    +R+ +P+ + I R +G+     E E +   G            K++    SQ SR ++  G  VRLFEA     G R ++KEFL      A+GE EL  Y H        +    D+ +                                 L G  W++ R   L T+    R+     G          L  L      + R  +++     ++ AL+ LH AGV H +L  S+LLVST + RE  R   + V L DLGFA    +LS E++                 L   D  G  Y LLE+ L  +                G         E             L+ + E  F  DV  G R   + E  ++ AV  LDE GGAGW LL  + +
Sbjct:   17 GGD---GLRVFRPSSITIRRQVGQLGFATETEWQYAGG------------KRNPLDPSQPSRTVEASGASVRLFEA-RLADGSRSLLKEFLGAEAR-AIGERELAVYRH----LEEEAGGAPDLSV-------------------------------GTLCGRLWLIFRWVPLRTIGGFARVEQPPAG----------LAGLFDWGAAQARREWVRTASRESLRALAALHAAGVAHRSLGSSSLLVSTYEQREAAR---LRVTLVDLGFAATPALLSAEEIAAAMRQAGCGPTGVLPLLTLYDLHGLGYVLLELVLSALVPRP-----------AGXXXXXXXXXE----------LQQLKRLVEDVFSDDVARGFRDYCAEEPGWEAAVALLDEGGGAGWDLLQSLVD 339          
BLAST of NO05G00550 vs. NCBI_GenBank
Match: OEU16577.1 (hypothetical protein FRACYDRAFT_185239 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 74.7 bits (182), Expect = 8.600e-10
Identity = 72/280 (25.71%), Postives = 119/280 (42.50%), Query Frame = 0
Query:  209 VPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDV---YKTRIAY-LKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREG-------GREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCSYSLLEVFLRL----MAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMANVERLMMGEERGVYGVGER-LLGSGFF 473
            VPPP   + WVV    GL T+ S   +A E++        K + G+ + P     ++ R  + +K +M  ++ AL+ +HE G+ H ++  ++ ++S+    +         R  G+ V LSD GFA  +L     D E + +    G S+   +  L +    MAE            LG +   L    E    P       ++Q +    F  D     R  V  E V++K V  LDE+ GAGW +L  +      +  +E  +  +  R LL + FF
Sbjct:  276 VPPPKTNSVWVVYEYAGLNTIASYTSMAPEKK-RAATPPKKNFFGRFVQPPALPPFRERANFVIKGIMKESLSALATIHEEGIVHRSIGRNSFVISSPTQNKAEASSIYFTRVSGLVVKLSDFGFA-GLLEDSANDQEFISRARSFGLSFRTGDTSLTMTNFAMAEDLHALGFVF---LGLLLVSLADLPENANAPMPNTDEDTIQKLLNEIFKLDF-QAFREYVEAEEVWEKLVLLLDEKDGAGWTVLETLFKARETVAEKENSLKVITARGLLSNPFF 549          
BLAST of NO05G00550 vs. NCBI_GenBank
Match: PRW56811.1 (ATP binding kinase [Chlorella sorokiniana])

HSP 1 Score: 74.3 bits (181), Expect = 1.100e-9
Identity = 88/370 (23.78%), Postives = 140/370 (37.84%), Query Frame = 0
Query:  111 SQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQ------PSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGL----------------------------VKRDWKGCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMA 447
            S+ S     +      F  +  Q    +++KE+LP  + VA+ E+++  +L    +     WQ       S+ PIV   GY   G + +  + + +  E+   ++        WVVL+  GL  L   P  A +  G G G+        LL       R   L+++  G++ AL+  HE GV HGAL   ++++ST D R   R   + V L + GFA+ V   +     G                              + D +  +  LLE  L  +A                           F  P    +A S+Q +    F   V    R    +E  +  AVE L ++ GAGW LL D+A
Sbjct:  209 SERSARTAVIAYTASFFSGMPFQDPVVVLVKEYLPGSKAVAINELQVLTHLAGMPEQT-MKWQVAAATLASNPPIVRLLGYFTAG-QTQKAAAMLEQGEQPEDAI--------WVVLKWDGLAPLALYPS-AQQTSGIGLGRLFGAQNNSLL------DRAKMLRSIARGSLQALAYCHEQGVVHGALGSGSVMLSTFDDRSAAR---LVVKLDNFGFARRVTLPKAPSSRGSSSQGASDPPAAASQPASLATDDTPLALGQREDLRALAVVLLECILSALA---------------------------FSGPSQLTSAESIQRLLGEVFSWGVD-EFRQYCEDEPDWAAAVELLSQDNGAGWALLQDLA 530          
BLAST of NO05G00550 vs. NCBI_GenBank
Match: PSC72592.1 (ATP binding [Micractinium conductrix])

HSP 1 Score: 67.4 bits (163), Expect = 1.400e-7
Identity = 63/222 (28.38%), Postives = 95/222 (42.79%), Query Frame = 0
Query:  111 SQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQ------PSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNV 327
            S+ S     +      F  +  Q     ++KE+LP  + VA  E+++ ++L          WQ       S+ PIV   GY   G   +        A+      P P     WVVL+  GL  L   P  A +  G G G+   G    L      + R   L+ +  GA+ AL+ +HEAGV HGAL   ++++ST D R   R   + V L + GFA+ +
Sbjct:  163 SERSARTAVIAYMASFFTGMPFQDPVATLVKEYLPGAKAVACNELQVLKHLAGMPDLT-MKWQVAASPLQSNPPIVRLLGYFVAGQTAK--------AQALLPGEPEP-EDAVWVVLKWEGLAPLALYPS-AQQTSGIGLGRLFGGQDSSL------RDRWRMLRAITRGALQALAYVHEAGVVHGALGSGSIMLSTFDDRSAQR---VVVKLDNFGFARQI 364          
BLAST of NO05G00550 vs. NCBI_GenBank
Match: XP_005850302.1 (hypothetical protein CHLNCDRAFT_142056 [Chlorella variabilis] >EFN58200.1 hypothetical protein CHLNCDRAFT_142056 [Chlorella variabilis])

HSP 1 Score: 65.1 bits (157), Expect = 6.800e-7
Identity = 86/321 (26.79%), Postives = 133/321 (41.43%), Query Frame = 0
Query:  138 LIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQPS------DIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLL--FPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRW---EEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMAN 448
            +++KE+LP  + VA  E+++ ++L    +T    WQ +        P+V   GY   G + +  S +    E   +          WVVL+  GL  L   P  + ++  G G       LG+L          R   L+ +  GA+ AL+  HEAGV HGAL   ++++ST D R   R   + V L + GFA+ V     V  EG  +R  KG   + L      +A           + L  +   L            P     A SLQ +    F   V    R    +E  ++ AVE L ++ GAGW LL ++ +
Sbjct:  151 VLIKEYLPGAKAVACNELQVLKHLAGMPETT-MKWQTAAAALAPSPPVVRLLGYFLAG-QTKQASELLQGEEAEDA---------IWVVLKWEGLAPLALYP--SAQQTSGIG-------LGRLFGAADSSMSDRARMLRAIARGALQALAYCHEAGVVHGALGSGSVMLSTFDDRSAAR---LIVKLDNFGFARKV----SVPREG--QRASKGGDPAALYPQPAPLATDDTPLALGQRDDLRALAVVLLECIVSALALNGPSQLTNAESLQRLLGEVFVWGVD-DFRQYCQDEPDWQAAVELLSQDDGAGWQLLQELVS 441          
The following BLAST results are available for this feature:
BLAST of NO05G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 8
Match NameE-valueIdentityDescription
EWM28336.14.500e-15262.96hypothetical protein Naga_100109g12 [Nannochlorops... [more]
CBN77912.17.000e-2027.78ATP binding protein, putative [Ectocarpus siliculo... [more]
CEM23152.13.400e-1425.58unnamed protein product [Vitrella brassicaformis C... [more]
XP_005787976.14.100e-1225.92hypothetical protein EMIHUDRAFT_462482 [Emiliania ... [more]
OEU16577.18.600e-1025.71hypothetical protein FRACYDRAFT_185239 [Fragilario... [more]
PRW56811.11.100e-923.78ATP binding kinase [Chlorella sorokiniana][more]
PSC72592.11.400e-728.38ATP binding [Micractinium conductrix][more]
XP_005850302.16.800e-726.79hypothetical protein CHLNCDRAFT_142056 [Chlorella ... [more]
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003828NSK003828Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00550.1NO05G00550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669702gene_2848Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100109g12gene2247Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00550.1NO05G00550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00550 ID=NO05G00550|Name=NO05G00550|organism=Nannochloropsis oceanica|type=gene|length=1557bp
ATGCTGCCATCCCGGTGGCAAGGCCGCTCCATCCTTTTTTTCTCTCTCCT
CCTTCCATCGTCGTTGGCATTCGTCGTCCGTCCTTCTTCGACGTTGGCGC
CGTGCCCACCATGCCGGCGCCACCATATCCCCATCTTGATGTCCGGAAAC
AATGATTATGGAGGAGACGACCCCTTTGCCATCCGAATCCTCCAACCCAA
TCAACTTCGCATCATCCGGGTCATTGGAGAGCAACGCCTCACGATCGAAG
AAGAGACCGAAAAGCGGGATGGTTCAGGTCCACGGGGTGCCTTTGGTCGG
ATTCGCAACAAAAAGTCGACTGAGGGACAATCACAAACAAGTCGAGAAAT
GAAAACCATGGGCGTGGGCGTTCGATTGTTCGAGGCGGTGGACTCGCAAA
CAGGAGAACGGCTTATTATGAAGGAATTCCTGCCTATGATGCGCAACGTG
GCCATGGGCGAGGTGGAGCTTTACCGgtaataatcaagactggatgtcac
atactgtttcttctctctgatctgctgagtttaaagttcttaaatcgtga
ctcaaattgttgtctcaatactcaaccacccttccctccctcactccctc
cctagGTACCTGCACCACTGGGTGCAGACCAACCACCCCTCCTGGCAGCC
GTCCGATATCCCCATCGTCCCCTTCCACGGCTACCTTCAAACAGGTCCTG
AAGTGGAAGACCCTTCTTTCGTCTACGACTGGGCAGAACGTTTTGGTTCC
TCCGTCCCTCCCCCCCTCGCGGGCAACACGTGGGTCGTGTTACGGACACC
GGGGCTCATCACGCTTACTTCCCTCCCTCGCCTGGCCTTGGAACGCGAAG
GAGGAGGGGGAGGGAAGGCAACCAAGGGCTGGTTGGGGAAATTATTGTTC
CCTGATGTGTATAAAACGAGGATTGCATATTTGAAAAACTTAATGGCAGG
TGCGATCGACGCACTTTCTCTGCTGCACGAGGCCGGGGTCTGTCATGGCG
CTCTCTCTCCCTCTACGCTCTTGGTCTCAACGGCCGATTTGAGGGAGGGA
GGGAGGGAGGGAGGGATGGAGGTGTGGTTGTCGGATTTGGGCTTTGCGAA
GAATGTGCTGAGTCAGGAGAAGGTGGATTTCGAGGGCCTGGTGAAGAGGG
ATTGGAAGGGGTGTTCCTACTCCTTGTTGGAGGTTTTCTTGAGGCTCATG
GCCGAGGACGAGGAGGAGGAGGAAAAGAAGCAGGGAGAGGGCCTCGGAGG
GGTTGAAGGGGGGTTGGGGCGATGGGAGGAGGGGTTTGGATTGCCTTTTG
CGCAGGTGACGGCGGGAAGCTTGCAGGGAGTGACCGAGGCGAGATTTGGG
GGCGATGTAGGGGTAGGGTTAAGAGGCCTGGTGAGCAATGAGAGGGTGTT
TAAGAAGGCCGTGGAGTGCCTGGACGAGGAGGGGGGCGCGGGGTGGGTGT
TATTGAATGACATGGCGAACGTCGAGAGGTTGATGATGGGGGAAGAGAGA
GGAGTGTACGGTGTGGGGGAGCGATTGTTGGGGAGTGGTTTTTTTGACGA
TGATTAG
back to top

protein sequence of NO05G00550.1

>NO05G00550.1-protein ID=NO05G00550.1-protein|Name=NO05G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=476bp
MLPSRWQGRSILFFSLLLPSSLAFVVRPSSTLAPCPPCRRHHIPILMSGN
NDYGGDDPFAIRILQPNQLRIIRVIGEQRLTIEEETEKRDGSGPRGAFGR
IRNKKSTEGQSQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNV
AMGEVELYRYLHHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYD
WAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKG
WLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVS
TADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCSYSLL
EVFLRLMAEDEEEEEKKQGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQG
VTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMANVER
LMMGEERGVYGVGERLLGSGFFDDD*
back to top
Synonyms
Publications