NO05G00550, NO05G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00550 vs. NCBI_GenBank
Match: EWM28336.1 (hypothetical protein Naga_100109g12 [Nannochloropsis gaditana]) HSP 1 Score: 547.4 bits (1409), Expect = 4.500e-152 Identity = 289/459 (62.96%), Postives = 339/459 (73.86%), Query Frame = 0 Query: 34 PCPPC--RRHHIPILMSGN----NDYGGDDPFAIRILQPNQLRIIRVIGEQRLTIEEETEKRDGSGPRGAFGRIRNKKS-TEGQSQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATK---------GWLGKLL---FPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMANVERLMMGEERGVYGVGERLLGSGFFD 474 PC P RR P+ +S N N DDPF I +L+PNQLRI+R IGEQRLT+EEETE RDG+GPRGAFGRIRNKKS TE +Q REM+ MGVG RLFEAVD++TG+ L++KEFLPMM+NVAMGEVELYRYL+ W + N P+W PSD+P+VP HGYL TGPEVEDPSFV W +RFG S+PPP+ GN WV +R L+ LTS+PRLAL G A K GW G+L PD R+AYLKN+ G+I A+SLLH+AGV HGA+SPST+LVSTADLREGGREGGMEVWLS+LGFA NVLSQ +DFEGLVKRDWKGCSY+LLEVFLRL+AE LG++EEGF LPFAQV AG LQ VTE RF GDV VGLR LV+NER +++AV CLD +GGAGWVLL+DMAN RL + +E GVYGVG RLL S F++ Sbjct: 70 PCRPISRRRPRRPLALSANDYDENRRKTDDPFTIPVLEPNQLRIVRPIGEQRLTVEEETETRDGAGPRGAFGRIRNKKSRTEQPAQIRREMRNMGVGARLFEAVDTRTGQALVLKEFLPMMKNVAMGEVELYRYLYDWTRRNQPAWLPSDLPLVPLHGYLTTGPEVEDPSFVQAWRDRFGPSLPPPVPGNVWVAVRAARLLPLTSVPRLAL-------GDAEKFPLASPGGAGWWGRLWGKGGPD----RVAYLKNVFEGSITAVSLLHQAGVVHGAVSPSTILVSTADLREGGREGGMEVWLSELGFATNVLSQGTLDFEGLVKRDWKGCSYALLEVFLRLLAE--------EXXXXXXXXXXLGKYEEGFTLPFAQVEAGGLQAVTEERFKGDVSVGLRSLVNNERAYQQAVACLDAKGGAGWVLLHDMANAGRL-VAQEGGVYGVGPRLLASSFWE 508
BLAST of NO05G00550 vs. NCBI_GenBank
Match: CBN77912.1 (ATP binding protein, putative [Ectocarpus siliculosus]) HSP 1 Score: 108.2 bits (269), Expect = 7.000e-20 Identity = 110/396 (27.78%), Postives = 164/396 (41.41%), Query Frame = 0 Query: 61 IRILQPNQLRIIRVIGEQRLTIEEETEKRDGSGPRGAFGRIRNKKSTEGQSQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELY-RYLHHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCS--------------YSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVL 442 +R + ++L++ R IGE L E T+ + S S SR + + G VRLFEA + ++++KEFLP +A E+E+ R W Q N P +P P++ G L + F+ W +F S+P P G+ W+V R GL T S P E E T K R ++K +M GA +AL+ +HE+GV H +L S+L V+T D R + +EV LSD GFA + ++D E + + G + YSL VFL L+ + SL+ + E F GD + E V++ AVE LD + G+GW L Sbjct: 72 LRTFEASELQLQRFIGE--LGFVEITD-----------WEYNRQTSPVDPSTPSRTLNSSGTTVRLFEA-RTYGNAKVVLKEFLPKGLKLAYREIEINDRLQDAWDQKNGPGGRP---PVLALMGSLVADESFKSRRFLEQWVSKF-PSLPVPAIGSVWLVYRWEGLYTFASFPPAKQESEFFDAFNPTSR----------TKRRATFVKEMMRGAANALAFMHESGVVHRSLGASSLRVNTLDERYPRQ---LEVLLSDFGFATRL---SEIDDETIRRASSAGATSPLAVSDFLFREDLYSLGYVFLELVFGAFCDDKSKRPD------------------------QNSLKRLLEDIFKGDF-KAFKDYCLTEPVWEPAVEVLDADRGSGWGL 408
BLAST of NO05G00550 vs. NCBI_GenBank
Match: CEM23152.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 89.4 bits (220), Expect = 3.400e-14 Identity = 99/387 (25.58%), Postives = 161/387 (41.60%), Query Frame = 0 Query: 112 QTSREMKTMGVGVRLFEAVDSQT---GERLIMKEFLPMMRNVAMGEVELYRYL--HHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFG-SSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDV-YKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWK----------------GCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGV---TEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMANVERLMM---------GEERGVYGVG 464 QT+ E M VRLF+A T G +++KE+ R++A E+++Y + + + S P+VP G ++ P + F W + +VPPP GN W VL+ PG +T + RL G+ + + + P K + +LK + A++A+ LH+ + H ++SP + ++ A+ RE ++V + D GFA + + D + V+R K S + ++A G+G GG + G R E G F Q + S V E F GD+ GLR N+ F V+ LD+ AGW L+ + +L G ER + G G Sbjct: 109 QTTDESSAM---VRLFQARLIPTGLPGYPVLLKEYATDARHLAETELDIYGEIIEDYNARKGLSEKAVSFPPVVPGLGRVEADPYLGTNEFQEQWKRQVAFRNVPPPRPGNIWTVLQWPGPLTFDTYDRL---------GRGERDDVLDGVVPGFRLKRKSRFLKMAIRRALEAIDYLHQLRIVHRSISPGSFVLQDANERE---PLNVKVLIQDFGFATTLQRLARSDDDDSVRRAMKVGAVTPAAILDYLKAEDLKSSCVTFLYFIVANLYDEAAAKRGQGKGGSDTGNKRMELTPG-GFRQTSPRSFLAVRRLVEEVFDGDMS-GLRDYWLNDEPFADVVKFLDQNDMAGWDFLSRLYKAPQLFQQQVKDTQQRGGEREISGDG 478
BLAST of NO05G00550 vs. NCBI_GenBank
Match: XP_005787976.1 (hypothetical protein EMIHUDRAFT_462482 [Emiliania huxleyi CCMP1516] >EOD35547.1 hypothetical protein EMIHUDRAFT_462482 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 82.4 bits (202), Expect = 4.100e-12 Identity = 106/409 (25.92%), Postives = 151/409 (36.92%), Query Frame = 0 Query: 54 GGDDPFAIRILQPNQLRIIRVIGEQRLTIEEETEKRDGSGPRGAFGRIRNKKSTEGQSQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQPSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKN--VLSQEKVD-------------FEGLVKRDWKGCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMAN 448 GGD +R+ +P+ + I R +G+ E E + G K++ SQ SR ++ G VRLFEA G R ++KEFL A+GE EL Y H + D+ + L G W++ R L T+ R+ G L L + R +++ ++ AL+ LH AGV H +L S+LLVST + RE R + V L DLGFA +LS E++ L D G Y LLE+ L + G E L+ + E F DV G R + E ++ AV LDE GGAGW LL + + Sbjct: 17 GGD---GLRVFRPSSITIRRQVGQLGFATETEWQYAGG------------KRNPLDPSQPSRTVEASGASVRLFEA-RLADGSRSLLKEFLGAEAR-AIGERELAVYRH----LEEEAGGAPDLSV-------------------------------GTLCGRLWLIFRWVPLRTIGGFARVEQPPAG----------LAGLFDWGAAQARREWVRTASRESLRALAALHAAGVAHRSLGSSSLLVSTYEQREAAR---LRVTLVDLGFAATPALLSAEEIAAAMRQAGCGPTGVLPLLTLYDLHGLGYVLLELVLSALVPRP-----------AGXXXXXXXXXE----------LQQLKRLVEDVFSDDVARGFRDYCAEEPGWEAAVALLDEGGGAGWDLLQSLVD 339
BLAST of NO05G00550 vs. NCBI_GenBank
Match: OEU16577.1 (hypothetical protein FRACYDRAFT_185239 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 74.7 bits (182), Expect = 8.600e-10 Identity = 72/280 (25.71%), Postives = 119/280 (42.50%), Query Frame = 0 Query: 209 VPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDV---YKTRIAY-LKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREG-------GREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCSYSLLEVFLRL----MAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMANVERLMMGEERGVYGVGER-LLGSGFF 473 VPPP + WVV GL T+ S +A E++ K + G+ + P ++ R + +K +M ++ AL+ +HE G+ H ++ ++ ++S+ + R G+ V LSD GFA +L D E + + G S+ + L + MAE LG + L E P ++Q + F D R V E V++K V LDE+ GAGW +L + + +E + + R LL + FF Sbjct: 276 VPPPKTNSVWVVYEYAGLNTIASYTSMAPEKK-RAATPPKKNFFGRFVQPPALPPFRERANFVIKGIMKESLSALATIHEEGIVHRSIGRNSFVISSPTQNKAEASSIYFTRVSGLVVKLSDFGFA-GLLEDSANDQEFISRARSFGLSFRTGDTSLTMTNFAMAEDLHALGFVF---LGLLLVSLADLPENANAPMPNTDEDTIQKLLNEIFKLDF-QAFREYVEAEEVWEKLVLLLDEKDGAGWTVLETLFKARETVAEKENSLKVITARGLLSNPFF 549
BLAST of NO05G00550 vs. NCBI_GenBank
Match: PRW56811.1 (ATP binding kinase [Chlorella sorokiniana]) HSP 1 Score: 74.3 bits (181), Expect = 1.100e-9 Identity = 88/370 (23.78%), Postives = 140/370 (37.84%), Query Frame = 0 Query: 111 SQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQ------PSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGL----------------------------VKRDWKGCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRWEEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMA 447 S+ S + F + Q +++KE+LP + VA+ E+++ +L + WQ S+ PIV GY G + + + + + E+ ++ WVVL+ GL L P A + G G G+ LL R L+++ G++ AL+ HE GV HGAL ++++ST D R R + V L + GFA+ V + G + D + + LLE L +A F P +A S+Q + F V R +E + AVE L ++ GAGW LL D+A Sbjct: 209 SERSARTAVIAYTASFFSGMPFQDPVVVLVKEYLPGSKAVAINELQVLTHLAGMPEQT-MKWQVAAATLASNPPIVRLLGYFTAG-QTQKAAAMLEQGEQPEDAI--------WVVLKWDGLAPLALYPS-AQQTSGIGLGRLFGAQNNSLL------DRAKMLRSIARGSLQALAYCHEQGVVHGALGSGSVMLSTFDDRSAAR---LVVKLDNFGFARRVTLPKAPSSRGSSSQGASDPPAAASQPASLATDDTPLALGQREDLRALAVVLLECILSALA---------------------------FSGPSQLTSAESIQRLLGEVFSWGVD-EFRQYCEDEPDWAAAVELLSQDNGAGWALLQDLA 530
BLAST of NO05G00550 vs. NCBI_GenBank
Match: PSC72592.1 (ATP binding [Micractinium conductrix]) HSP 1 Score: 67.4 bits (163), Expect = 1.400e-7 Identity = 63/222 (28.38%), Postives = 95/222 (42.79%), Query Frame = 0 Query: 111 SQTSREMKTMGVGVRLFEAVDSQTGERLIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQ------PSDIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLLFPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNV 327 S+ S + F + Q ++KE+LP + VA E+++ ++L WQ S+ PIV GY G + A+ P P WVVL+ GL L P A + G G G+ G L + R L+ + GA+ AL+ +HEAGV HGAL ++++ST D R R + V L + GFA+ + Sbjct: 163 SERSARTAVIAYMASFFTGMPFQDPVATLVKEYLPGAKAVACNELQVLKHLAGMPDLT-MKWQVAASPLQSNPPIVRLLGYFVAGQTAK--------AQALLPGEPEP-EDAVWVVLKWEGLAPLALYPS-AQQTSGIGLGRLFGGQDSSL------RDRWRMLRAITRGALQALAYVHEAGVVHGALGSGSIMLSTFDDRSAQR---VVVKLDNFGFARQI 364
BLAST of NO05G00550 vs. NCBI_GenBank
Match: XP_005850302.1 (hypothetical protein CHLNCDRAFT_142056 [Chlorella variabilis] >EFN58200.1 hypothetical protein CHLNCDRAFT_142056 [Chlorella variabilis]) HSP 1 Score: 65.1 bits (157), Expect = 6.800e-7 Identity = 86/321 (26.79%), Postives = 133/321 (41.43%), Query Frame = 0 Query: 138 LIMKEFLPMMRNVAMGEVELYRYLHHWVQTNHPSWQPS------DIPIVPFHGYLQTGPEVEDPSFVYDWAERFGSSVPPPLAGNTWVVLRTPGLITLTSLPRLALEREGGGGGKATKGWLGKLL--FPDVYKTRIAYLKNLMAGAIDALSLLHEAGVCHGALSPSTLLVSTADLREGGREGGMEVWLSDLGFAKNVLSQEKVDFEGLVKRDWKGCSYSLLEVFLRLMAEXXXXXXXXXGEGLGGVEGGLGRW---EEGFGLPFAQVTAGSLQGVTEARFGGDVGVGLRGLVSNERVFKKAVECLDEEGGAGWVLLNDMAN 448 +++KE+LP + VA E+++ ++L +T WQ + P+V GY G + + S + E + WVVL+ GL L P + ++ G G LG+L R L+ + GA+ AL+ HEAGV HGAL ++++ST D R R + V L + GFA+ V V EG +R KG + L +A + L + L P A SLQ + F V R +E ++ AVE L ++ GAGW LL ++ + Sbjct: 151 VLIKEYLPGAKAVACNELQVLKHLAGMPETT-MKWQTAAAALAPSPPVVRLLGYFLAG-QTKQASELLQGEEAEDA---------IWVVLKWEGLAPLALYP--SAQQTSGIG-------LGRLFGAADSSMSDRARMLRAIARGALQALAYCHEAGVVHGALGSGSVMLSTFDDRSAAR---LIVKLDNFGFARKV----SVPREG--QRASKGGDPAALYPQPAPLATDDTPLALGQRDDLRALAVVLLECIVSALALNGPSQLTNAESLQRLLGEVFVWGVD-DFRQYCQDEPDWQAAVELLSQDDGAGWQLLQELVS 441 The following BLAST results are available for this feature:
BLAST of NO05G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00550 ID=NO05G00550|Name=NO05G00550|organism=Nannochloropsis oceanica|type=gene|length=1557bpback to top protein sequence of NO05G00550.1 >NO05G00550.1-protein ID=NO05G00550.1-protein|Name=NO05G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=476bpback to top Synonyms
Publications
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