NO04G05170, NO04G05170 (gene) Nannochloropsis oceanica

Overview
NameNO04G05170
Unique NameNO04G05170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3944
Alignment locationchr4:1439435..1443378 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1439435..1443378 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR035979RBD_domain_sf
IPR023395Mt_carrier_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO04G05170 vs. NCBI_GenBank
Match: GBG28388.1 (Mitochondrial thiamine pyrophosphate carrier 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 186.4 bits (472), Expect = 2.400e-43
Identity = 115/285 (40.35%), Postives = 163/285 (57.19%), Query Frame = 0
Query:  294 SYYTASGIAAVINFPLWKASAIGQSGFQLATLHPSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPA----SPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGAR-------------FLWRGMGKNVVAVTIPVAATIFLADMIGR 562
            +Y  AS  AA +N+PLWKASA+ QS F    + P               A+APPY+G+ A   GM WAR  IF+GS+  +  L Q +G   A A   P L  S+ VQ+ NMPI+RA+IT+QNP       ++ T   L+ +    G   LW G  AG++K+VPKY+T+VVVKD  E +L +   +++      + R+ +K+V AG+AGAVLTNP D++RNE FK +  L  T+R L  +E AR             ++ RG+G N+VAV++P+  TIFL D   R
Sbjct:   10 AYLAASAGAAAVNYPLWKASAVSQSAF----IQPQ-GDGLAARFQVFKQAIAPPYRGMPAVIFGMTWARCAIFFGSDYWRPRL-QQWGAPDAVAMMTPPLVFSSIVQIVNMPIVRASITMQNPKVENDPNFRTTVSTLRHLAETKGFFKLWHGLPAGLIKSVPKYITSVVVKDLCEMYLPKASTESE-----FLTRSCIKSVVAGVAGAVLTNPADILRNEMFKTDLGLFDTVRKLRTDELARRPNASSPFLASMGWVTRGLGSNLVAVSVPITLTIFLTDFFIR 283          
BLAST of NO04G05170 vs. NCBI_GenBank
Match: KOO52867.1 (hypothetical protein Ctob_013366 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 182.6 bits (462), Expect = 3.500e-42
Identity = 102/217 (47.00%), Postives = 138/217 (63.59%), Query Frame = 0
Query:  346 PPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQ---RAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMI 560
            PPYKGV AT  GM WARA IFYGS+ GK+ + Q  G   A A  +P +  + FVQ+ N PI+R+TI LQ+P+S   N    L  +    G K  + G+SA ++KTVPKY+ A++VKD +   L   P+  +  R   V+   RAA+K+V AG+AGA LTNPLDV+RNE FK E+    T++ L+  EG  F  RGM +N+VAV +P+A TIFL D +
Sbjct:    7 PPYKGVTATIFGMTWARAAIFYGSDVGKDYMVQQ-GHSTALASTVPPMGLAVFVQVANQPIVRSTIMLQDPSSTQPNVLSQLVELTRTRGWKAAYHGSSASVLKTVPKYVCAILVKDWVAANLPP-PSAREGTRQHKVEALNRAAVKSVAAGVAGAALTNPLDVIRNEMFKFEEGFGQTVQRLLRSEGWAFCLRGMQRNLVAVAVPIAMTIFLTDTL 221          
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_001750746.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ84451.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 181.4 bits (459), Expect = 7.700e-42
Identity = 97/201 (48.26%), Postives = 131/201 (65.17%), Query Frame = 0
Query:  358 MCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADM 559
            M WARA IFYGS+ G++ L++  G   A A  +P L  S  VQ+ NMP++R +I LQ+PASP+ +     + I  + G  GLW G SAGI KTVPKY+TAV+VK  M+  L   P + +  R   + R+A KAV AG AGA+LTNP DV+RN  F+ +  + P +R L + EG RF+WRG+ KN++AV IPV  TIFL D+
Sbjct:    1 MTWARAAIFYGSDFGRKHLTE-AGAPKAVAVVLPPLALSIGVQIVNMPLVRCSIMLQDPASPHSSVLAIGRDIVHRRGYAGLWHGLSAGIAKTVPKYVTAVLVKQAMDRSL--APVNKEQDRLGWLVRSAKKAVVAGTAGAILTNPFDVIRNHMFRTDLGMVPAIRSLYQTEGPRFVWRGVAKNMIAVAIPVTVTIFLTDI 198          
BLAST of NO04G05170 vs. NCBI_GenBank
Match: OLP87927.1 (Calcium-binding mitochondrial carrier protein SCaMC-2 [Symbiodinium microadriaticum])

HSP 1 Score: 165.2 bits (417), Expect = 5.700e-37
Identity = 98/269 (36.43%), Postives = 143/269 (53.16%), Query Frame = 0
Query:  295 YYTASGIAAVINFPLWKASAIGQSGFQLATLHPSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQ-NPASPYQNTSEA-----LQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLAD 558
            Y  AS +++ +  P+WKA+ IGQSG+ L    P             L A  PPY+G     +G  WA+A IF+GS++G   L +  G    WA  +P L  S  VQ+ N P +R++I LQ +P   + ++S +     L+ ++   G++ LWLGT   I +T PKY+ AV  KD ME+ L +   D D   +  V R              +TNPLDV +NE +K   S   T++ L   EG R+L+RG+ KNV+A  +P+A TIFL D
Sbjct:   11 YLLASAVSSFVTLPVWKAATIGQSGYALTAESP---------LGRFLEAARPPYRGSFVVVSGRTWAQAMIFFGSDEGSRWL-RRCGWSSLWASCVPPLLISANVQVANQPFVRSSIMLQGDPQVRFAHSSHSPNLAVLRYLWRTKGLRALWLGTGVSIARTAPKYVAAVGAKDAMEELLAQ---DDDMTIASSVLRXXXXXXXXXXXXXXVTNPLDVAQNEMYKTGDSFVSTVKRLQRAEGCRWLFRGVDKNVLASAMPMALTIFLTD 266          
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_005773142.1 (hypothetical protein EMIHUDRAFT_469931, partial [Emiliania huxleyi CCMP1516] >EOD20713.1 hypothetical protein EMIHUDRAFT_469931, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 149.8 bits (377), Expect = 2.500e-32
Identity = 87/199 (43.72%), Postives = 120/199 (60.30%), Query Frame = 0
Query:  293 VSYYTASGIAAVINFPLWKASAIGQSGF--QLATLHPSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEE--VPADADNPRSLLVQRAA 488
            +SY + +G+AA++NFPLWKA+AIGQSGF  Q  T    L              + PPYKGV AT  GM WARA IFY ++ G++ +    G   A A A+PA+  ST VQ+ N PI+R TIT+Q+P+S +     AL+ I++  G+ GLW GT   + KTVPKY+ A+ VKD M++ L +   P  A   RS ++Q  A
Sbjct:   10 ISYLSGAGLAALVNFPLWKAAAIGQSGFTAQGPTFFARLK-----------VLLGPPYKGVAATLFGMTWARAAIFYCADAGRDRMLA-LGASPAAATALPAVGISTLVQVVNQPIVRGTITIQDPSSRHAGLVAALRHIHATRGVSGLWHGTVPAVAKTVPKYVVAIWVKDAMQELLPKPTAPPGAPGHRSQVLQARA 196          
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_002287920.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95363.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 145.2 bits (365), Expect = 6.100e-31
Identity = 92/225 (40.89%), Postives = 123/225 (54.67%), Query Frame = 0
Query:  295 YYTASGIAAVINFPLWKASAIGQSGFQL---ATLHPSLPXXXXXXXXXXLA----AMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECF 513
            Y++AS IAAV+N+PLW+ASA+GQSGF++   +  +P +           LA    A +PPYKG+ AT  GM WARA IFYGS++GKE+L    G     A  +P L  ST V                                   GI GLW GTSAGI+KTVPKY TA+ VKD  E  L  V  ++++     +  +A+K+  AG+AGA LTNPLDV+++  F
Sbjct:   14 YFSASTIAAVLNYPLWRASAVGQSGFRVVLQSANYPPVLTHVASAVPQSLAPYFHAFSPPYKGLAATVMGMSWARAAIFYGSDRGKEILLS-MGFANTTATVLPPLVVSTAVH---------------------------------HGISGLWHGTSAGILKTVPKYCTAIFVKDYFERVLPPVDPESEHKDREKLVHSAIKSSAAGVAGAALTNPLDVMQSVHF 204          
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_012869902.1 (PREDICTED: mitochondrial basic amino acids transporter isoform X1 [Dipodomys ordii])

HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8
Identity = 66/232 (28.45%), Postives = 103/232 (44.40%), Query Frame = 0
Query:  348 YKGVLATWAGMCWARATIFYGSEKGKELLSQ----HYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQ--NPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLV-------EEEGARFLWRGMGKNVVAVTIPVAATIF--LADMIGRARG 565
            YKG+ +   G+ +  A +F        +L      H  V GA AGAI        V  C M + +  + LQ   PA  Y+ + + L  IY + G++G+  G ++ +++  P +    +  D +   L   PAD      LLV +  L   TAG+A  + T P+DVV++          P  RGL+       E EG R   RG+G  ++    PV A  F  +  ++  ARG
Sbjct:   81 YKGLGSPLMGLTFINALVFGVQGNTLRVLGHDSPLHQFVAGAAAGAIQC------VICCPMELAKTRLQLQAAGPARAYKGSLDCLAQIYRREGLRGINRGMASTLLRETPSFGVYFLTYDVLTRALRCEPAD-----PLLVPKLLLAGGTAGMASWLSTYPVDVVKSRLQADGVRGAPRYRGLLDCARQSYEAEGWRVFTRGLGSTLLR-AFPVNAATFATVTAVLSYARG 300          
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_012869910.1 (PREDICTED: mitochondrial basic amino acids transporter isoform X2 [Dipodomys ordii])

HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8
Identity = 66/232 (28.45%), Postives = 103/232 (44.40%), Query Frame = 0
Query:  348 YKGVLATWAGMCWARATIFYGSEKGKELLSQ----HYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQ--NPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLV-------EEEGARFLWRGMGKNVVAVTIPVAATIF--LADMIGRARG 565
            YKG+ +   G+ +  A +F        +L      H  V GA AGAI        V  C M + +  + LQ   PA  Y+ + + L  IY + G++G+  G ++ +++  P +    +  D +   L   PAD      LLV +  L   TAG+A  + T P+DVV++          P  RGL+       E EG R   RG+G  ++    PV A  F  +  ++  ARG
Sbjct:   59 YKGLGSPLMGLTFINALVFGVQGNTLRVLGHDSPLHQFVAGAAAGAIQC------VICCPMELAKTRLQLQAAGPARAYKGSLDCLAQIYRREGLRGINRGMASTLLRETPSFGVYFLTYDVLTRALRCEPAD-----PLLVPKLLLAGGTAGMASWLSTYPVDVVKSRLQADGVRGAPRYRGLLDCARQSYEAEGWRVFTRGLGSTLLR-AFPVNAATFATVTAVLSYARG 278          
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_012869920.1 (PREDICTED: mitochondrial basic amino acids transporter isoform X3 [Dipodomys ordii] >XP_012869929.1 PREDICTED: mitochondrial basic amino acids transporter isoform X3 [Dipodomys ordii])

HSP 1 Score: 66.6 bits (161), Expect = 2.800e-7
Identity = 59/197 (29.95%), Postives = 90/197 (45.69%), Query Frame = 0
Query:  379 HYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQ--NPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLV-------EEEGARFLWRGMGKNVVAVTIPVAATIF--LADMIGRARG 565
            H  V GA AGAI        V  C M + +  + LQ   PA  Y+ + + L  IY + G++G+  G ++ +++  P +    +  D +   L   PAD      LLV +  L   TAG+A  + T P+DVV++          P  RGL+       E EG R   RG+G  ++    PV A  F  +  ++  ARG
Sbjct:   28 HQFVAGAAAGAIQC------VICCPMELAKTRLQLQAAGPARAYKGSLDCLAQIYRREGLRGINRGMASTLLRETPSFGVYFLTYDVLTRALRCEPAD-----PLLVPKLLLAGGTAGMASWLSTYPVDVVKSRLQADGVRGAPRYRGLLDCARQSYEAEGWRVFTRGLGSTLLR-AFPVNAATFATVTAVLSYARG 212          
The following BLAST results are available for this feature:
BLAST of NO04G05170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 19
Match NameE-valueIdentityDescription
GBG28388.12.400e-4340.35Mitochondrial thiamine pyrophosphate carrier 1 [Au... [more]
KOO52867.13.500e-4247.00hypothetical protein Ctob_013366 [Chrysochromulina... [more]
XP_001750746.17.700e-4248.26hypothetical protein [Monosiga brevicollis MX1] >E... [more]
OLP87927.15.700e-3736.43Calcium-binding mitochondrial carrier protein SCaM... [more]
XP_005773142.12.500e-3243.72hypothetical protein EMIHUDRAFT_469931, partial [E... [more]
XP_002287920.16.100e-3140.89predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_012869902.11.900e-828.45PREDICTED: mitochondrial basic amino acids transpo... [more]
XP_012869910.11.900e-828.45PREDICTED: mitochondrial basic amino acids transpo... [more]
XP_012869920.12.800e-729.95PREDICTED: mitochondrial basic amino acids transpo... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL075nonsL075Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR107ngnoR107Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007589NSK007589Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G05170.2NO04G05170.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO04G05170.1NO04G05170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100441g1gene1693Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G05170.2NO04G05170.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO04G05170.1NO04G05170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G05170 ID=NO04G05170|Name=NO04G05170|organism=Nannochloropsis oceanica|type=gene|length=3944bp
ATGCCCAATGCCCATTTGAGGACGgtttgtagttctttggagcgttccta
catctctctagaactatcgcatgcaacctgacgtcttcgaggacttgcat
acgagggggagccttccaacaagaaattgttgtcatcccttatttccttg
tccgagtttttctagcgactttgacaggttttttgacctggcaaagtccc
tggacggcccacacagggccaggaggagagggggaaggaggataaaagag
gaggtcagcgggaaggctacacatagagtgtccctatatcctgccgcggt
tgaccaaaccgcagatcatggggacgagcttcccctcggaccatactcct
gtacacccgtagGATGTTACGTGCCCCATTGCCGTCCCGAGACACGAACT
GTTCACAGGTGTCACACCAATACAGTCCTCGGAAACGCATCGTCTCCCTC
CTGCTCCTCCTCCTCTTCCCCCTTCTTCTTCTTCCTCTTCCTCTTCTTCT
TCTTCTTCTCCCTCTTCTTTTTCTTCTTCTCCTTCTTTTTCTTCTTCTTC
TTCTTCTTCTCCTTCTCCTTCTACTTCTTCTTCCTCTTCCTCTTATTCTT
CTTCCTCTTCTTCCTCTTTTACCTCTTCCTCTCCTCCTTCTTCTTCTTGT
TCGTCTTCTGCTTCCTCCTCTTCTTCTCCTCCTCCGCCTCCTCCCCCTTC
TCCCCCTCCTCCTCCACCTCCTCCTCCACCTCCTCCACCTCCTCCTCCTC
CTTCTCCACCTCCTTCTCCTCCTTCTCCACCTCCTTCTCCTCCTTCTCCT
TCTGCCATTCTCGCAATTGGGTTTAGACGCTGCCCACAATCGAGgtgtac
ctttgtctgtggtttgaggaggggggggggggggggggaaatagagagga
agtgtgacggctctaatggagggtgtggtgttgtccttggcataatggca
aaatgtaagttgtattttcctcacgtccctctcttcctccctccttctct
ccctccccatttcctcgtgcccctagACCACAGAGAGTGAGTTGGAAGCA
CTCCTCCGTCGGTCCCCTCCTCTTGTGCTACATTCGGCCTAAGCGCAGCG
ACCGGAGTGAGAGTCTCACGGGATTAGTCAGGTTTGAGAAGAAGGAGGAT
GCCGCGGCGGCCGTTACGAAGCTGTGCGGgtgagacgggagggaggaagg
gagggagggagggaggaagggaaggagaaagggaaggaggaagggagatt
ctccgcatggctgcttggttgttgatgtttttgactgaatctgcacacaa
acttttcttattcctctccctcagAGAACGTCTGCATGACCGTGTCCTCA
AGCCCGAGCTTATCAACCGTCCGTTTCTTTTCTTGGACGATAACGGCCGC
CTGGTGGAGTCCAAGGGAAGGGACCGAGAGAAGGACAAGGAGCGGAAGGC
AGCGCTTAAGGCGGCAGTTTGTAGgtaaatggccaagtctggtgcacaag
ggaagaaggtcggcccatactgtttttcttttggcgcgaaacggccacat
gaacggaatagccgggcactccgagactcaatgttcttgtccacctttcc
agtttagcggccacacttgccccctccctccgccggcataatttatctga
ggcctgatgtggttgcttagtgcgtgtgagagttgtgtgaccttggtagg
gcaagcgagacgttgctggataaagaacaaccaacacaaactttgcgatc
ctgatctattggaagcacgccattctttttttcctcctcatgtcctctcc
acacggcgtgcattgacgtacaacacagGACCGCATACGAGGATAGCACT
TCAGGAATGGGCGGAGGCGGCGGTGGCGCTGGCAAGGCCGACGCTGTTTC
CTACTACACAGCTTCCGGGgtaagttaatccttctagcaaagtttctctc
ccgctctgtttctcccttcaatgtatgacgacccctgacactgtccaatc
tctctgttcctccatccttcctagATTGCCGCCGTCATCAACTTTCCACT
ATGGAAGGCCAGCGCCATCGGACAATCTGGCTTCCAGCTTGCGACCCTCC
ACCCCTCCCTCCCTCCCGCCCTCCCTTCCTACCTCACCCGGTACCTAGCC
GCCATGGCCCCGCCTTACAAGGGTGTTTTGGCCACTTGGGCAGGCATGTG
CTGGGCTCGTGCCACAATTTTCTACGGATCGGAGAAGGGGAAGGAGTTGT
TGAGCCAGCACTACGGGGTGAAGGGAGCTTGGGCCGGgtaaggcaggcag
ggagggagtgagggagggagggagggagggagggaggaaaatgatggggg
aaatggaagggcgcgtataaataggcgtcggctgttgatgcataggtatc
aggactatgatgtgagcgaatgcacgtattacagaatgttcagctgcccc
aacatctatctgacacttccctcccttccttcctaccccacgttccttgc
cttcattccttccctccctccctccctcccaccctcccacagCGCCATCC
CTGCCCTCTTCACCTCCACCTTCGTCCAGCTCTGTAATATGCCAATCATT
CGAGCCACCATCACGCTCCAGAACCCCGCGTCTCCCTACCAGAATACCTC
CGAGGCGCTGCAGGCCATCTATTCAAAGGGAGGGATCAAGgtgggtaggg
agggaggaagggagggaggaaacgagggagaaagaaggagtggtggacga
ttgagaggttatggatttgttctgatggcatttggactcggatgtagctg
gccttaaaacaacattgattagtttttatatttctgcctcacacgtgatg
ggaacggctcaaagtcctcaagcaatctcattgtcgctcgctgttttcgc
atttttgccttccttttttccctctctcattccctccctccctccctcag
GGCCTCTGGCTCGGGACCTCGGCAGGGATTATGAAGACAGTTCCGAAATA
TATGACGGCCGTGGTGGTCAAGGACAAGgtagggatggagggagggaggg
aggaaaagggggaggaagggaaggagggagagggggagggaaaagccagc
catggaaaggagaaggatcacagcaccacatgaaatgtgcgggcatggct
tgtgtagatttgaatcgaccaacacaccctccctccttgcttccctcggt
cgctccctccccctttccctctctcctggcagATGGAGGACTGGTTGGAG
GAGGTTCCGGCTGACGCGGACAATCCTCGCTCTCTCCTCGTCCAGCGTGC
GGCCTTGAAAGCCGTTACTGCCGGCTTGGCGGGCGCCGTGCTGACTAACC
CGTTGGACGTGGTGAGGAACGAGTGCTTTAAGCGGGAGCAGAGCCTTAGG
CCGACCTTGCGGGGGCTGGTGGAGGAGGAAGGGGCACGCTTCTTGTGGAG
GGGGATGGgtgaggagggagggagggagggagggagggagggggtggggg
aagccaaggccaaaaccaagtgactagatttcaaatgattcttatccact
cgctcttctttcccgctccctccctccctccccccttgtccagGCAAGAA
CGTGGTGGCCGTGACGATCCCAGTGGCCGCCACCATCTTCCTCGCAGACA
TGATCGGAAGGGCCCGGGGCTTGTAGCCCTAGGGAGGGAGGGTGTCACCG
GGTTGTGTGTATTTGTAGGGCATTTCCGCTGCTTTGCTCTTGCTGTCGAA
AGAGGACGAGGGTGGGAAAAGTAAGGAAGCAAGGGTTAAAAGAAGGCAAG
AGGAAGGGAGGGAGGGAGAGATGAAAAAGAGGAATGTAACAGTACCGGAT
AAAGGGATTGTGAGACCATCACTGATATGTCGGGCCTTCCATTAAATTGC
AACATAGACAGCTGTGGTCGCTTCCTCCTCCATATTGACAGTCG
back to top

protein sequence of NO04G05170.2

>NO04G05170.2-protein ID=NO04G05170.2-protein|Name=NO04G05170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=476bp
MPNAHLRTDVTCPIAVPRHELFTGVTPIQSSETHRLPPAPPPLPPSSSSS
SSSSSSSPSSFSSSPSFSSSSSSSPSPSTSSSSSSYSSSSSSSFTSSSPP
SSSCSSSASSSSSPPPPPPPSPPPPPPPPPPPPPPPPPSPPPSPPSPPPS
PPSPSAILAIGFRRCPQSRPQRVSWKHSSVGPLLLCYIRPKRSDRSESLT
GLVRFEKKEDAAAAVTKLCGERLHDRVLKPELINRPFLFLDDNGRLVESK
GRDREKDKERKAALKAAVCRTAYEDSTSGMGGGGGGAGKADAVSYYTASG
IAAVINFPLWKASAIGQSGFQLATLHPSLPPALPSYLTRYLAAMAPPYKG
VLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQ
LCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKVGREGGREGGNEG
ERRSGGRLRGYGFVLMAFGLGCSWP*
back to top

protein sequence of NO04G05170.1

>NO04G05170.1-protein ID=NO04G05170.1-protein|Name=NO04G05170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=566bp
MPNAHLRTDVTCPIAVPRHELFTGVTPIQSSETHRLPPAPPPLPPSSSSS
SSSSSSSPSSFSSSPSFSSSSSSSPSPSTSSSSSSYSSSSSSSFTSSSPP
SSSCSSSASSSSSPPPPPPPSPPPPPPPPPPPPPPPPPSPPPSPPSPPPS
PPSPSAILAIGFRRCPQSRPQRVSWKHSSVGPLLLCYIRPKRSDRSESLT
GLVRFEKKEDAAAAVTKLCGERLHDRVLKPELINRPFLFLDDNGRLVESK
GRDREKDKERKAALKAAVCRTAYEDSTSGMGGGGGGAGKADAVSYYTASG
IAAVINFPLWKASAIGQSGFQLATLHPSLPPALPSYLTRYLAAMAPPYKG
VLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQ
LCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKT
VPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVL
TNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVA
ATIFLADMIGRARGL*
back to top
Synonyms
Publications