NO04G05170, NO04G05170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_005853766.1 (hypothetical protein NGA_0472300 [Nannochloropsis gaditana CCMP526] >EKU22593.1 hypothetical protein NGA_0472300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 404.8 bits (1039), Expect = 4.300e-109 Identity = 211/277 (76.17%), Postives = 226/277 (81.59%), Query Frame = 0 Query: 292 AVSYYTASGIAAVINFPLWKASAIGQSGFQLA---TLHPSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMIGRARGL 566 AVSYYTASGIAA+INFPLWKASAIGQSGFQLA TLHP+ P XX AAMAPPYKGV ATWAGMCWARATIFYGSE+GKELL Q YGV GAWAGA+PAL TSTFVQLCNMPIIRATIT+QNPASPY+NT+EAL+AIY KGG+ KME+WL+ VP + DN RSLLVQR+A+KAVTAGLAGAVLTNPLDVVRNECFKREQSL PTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLAD+I RARGL Sbjct: 11 AVSYYTASGIAAIINFPLWKASAIGQSGFQLASTTTLHPTFPPALXXYLSRYFAAMAPPYKGVFATWAGMCWARATIFYGSERGKELLRQRYGVTGAWAGALPALVTSTFVQLCNMPIIRATITVQNPASPYRNTTEALRAIYKKGGV--------------------------KMEEWLDPVPENVDNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISRARGL 261
BLAST of NO04G05170 vs. NCBI_GenBank
Match: CBJ31542.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 252.7 bits (644), Expect = 2.700e-63 Identity = 144/268 (53.73%), Postives = 175/268 (65.30%), Query Frame = 0 Query: 295 YYTASGIAAVINFPLWKASAIGQSGFQLATLHPSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMIGRA 563 ++ ASG+AA+INFPLW+A+AIGQSGF T S L A+ PPYKGV AT GM WARA IFYGS++GK L + A+P L ST VQL NMPIIRA+IT+QNP S + + E+L AIY KGG+ LW GTSAG+MKTVPKY AV VKD ME L PAD R + R+A K+V AG+AGA LTNPLDV+RNE FK + +R L L EEG+ F RGM KN+VAV IP+ TIF+ D++ RA Sbjct: 12 HFAASGVAAIINFPLWRAAAIGQSGFDTTTNMGS------NFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVSVKDYMERNL--APAD-HGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGSGFAVRGMSKNLVAVAIPITVTIFVTDVLVRA 270
BLAST of NO04G05170 vs. NCBI_GenBank
Match: GAX24962.1 (hypothetical protein FisN_2Lh238 [Fistulifera solaris]) HSP 1 Score: 249.6 bits (636), Expect = 2.300e-62 Identity = 140/266 (52.63%), Postives = 173/266 (65.04%), Query Frame = 0 Query: 295 YYTASGIAAVINFPLWKASAIGQSGFQLATLH-PSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMI 560 Y AS +AA IN+PLW+ASAIGQSGF + + P++ + A APPYKG LAT GM WARA IF+GS+ GKE L Q G+ + A +P L ST VQ NMP++RATIT+Q+P S N + AL+ I+ G GLW GTSAG++KTVPKY TAVVVK MEDWL P D L R+A K+ AG+AGA LTNPLDV+RNE FK + PT++ L E G RFL RG+GKN++AV IPVA TIF D + Sbjct: 11 YLIASALAATINYPLWRASAIGQSGFVVESARIPAI-------LSPYVHAFAPPYKGALATVLGMTWARAAIFWGSDYGKEQLMQ-MGIAESVATVLPPLLVSTIVQCVNMPLVRATITIQDPQSKLPNVAAALRYIHQTHGWAGLWHGTSAGVLKTVPKYCTAVVVKGFMEDWL---PPPTDPSERL--WRSAYKSAAAGIAGAALTNPLDVIRNEMFKTNLEMTPTVQKLWRELGVRFLGRGLGKNMIAVAIPVACTIFFTDAL 263
BLAST of NO04G05170 vs. NCBI_GenBank
Match: GAX12407.1 (hypothetical protein FisN_2Hh238 [Fistulifera solaris]) HSP 1 Score: 246.1 bits (627), Expect = 2.600e-61 Identity = 142/266 (53.38%), Postives = 172/266 (64.66%), Query Frame = 0 Query: 295 YYTASGIAAVINFPLWKASAIGQSGFQLATLH-PSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMI 560 Y AS +AA IN+PLW+ASAIGQSGF + + P+L + A APPYKG LAT GM WARA IF+GS+ GKE L Q G+ + A +P L ST VQ NMP++RATIT+Q+P S N + AL+ IY G GLW GTSAG++K+VPKY TAVVVK MEDWL P D L R+A K+ AG+AGA LTNPLDV+RNE FK L T++ L E G RFL RG+GKN+VAV IPVA TIF D + Sbjct: 11 YLIASALAATINYPLWRASAIGQSGFVVESARIPAL-------LSPYVHAFAPPYKGALATVLGMTWARAGIFWGSDYGKEQLMQ-MGMAESAATVLPPLVVSTVVQCVNMPLVRATITIQDPQSKLPNVAAALRYIYQTHGWAGLWHGTSAGVLKSVPKYCTAVVVKGFMEDWL---PPPTDPSERL--WRSAYKSAAAGIAGAALTNPLDVIRNEMFKTNLELTATVQKLWRELGVRFLARGLGKNMVAVAIPVACTIFFTDAL 263
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_002185091.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43538.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 242.7 bits (618), Expect = 2.800e-60 Identity = 132/263 (50.19%), Postives = 171/263 (65.02%), Query Frame = 0 Query: 295 YYTASGIAAVINFPLWKASAIGQSGFQLATLHPSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLAD 558 Y AS +AA IN+PLW+ASA QSGF++A +H + + A PPYKG+LAT GM WARA IF+GS+ G+++L + G +A P L ST VQ NMP++R+TITLQNP S + S ++Q IY+ G++GLW GTSAGI+KTVPKY+TAVVVKD ME L + + R+A K+ AG+AGA LTNPLDV+RNE FK L T+R L E EG F++RG+GKN++AV IPV TIF D Sbjct: 17 YLMASALAATINYPLWRASATAQSGFRIAPVHIA-GHAIPSGVAPYVYAFLPPYKGMLATVLGMTWARAAIFWGSDYGRDIL-RTGGWNDGFATVAPPLVVSTAVQCINMPLVRSTITLQNPQSHLRTVSASVQQIYNSHGVQGLWHGTSAGILKTVPKYITAVVVKDWMEQALPPADPLSKTYHQDRLWRSAAKSAMAGVAGAALTNPLDVIRNEMFKTNLGLAATVRHLQETEGYAFVYRGLGKNLIAVAIPVGCTIFFTD 277
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_004995367.1 (hypothetical protein PTSG_03639 [Salpingoeca rosetta] >EGD83003.1 hypothetical protein PTSG_03639 [Salpingoeca rosetta]) HSP 1 Score: 241.5 bits (615), Expect = 6.300e-60 Identity = 136/270 (50.37%), Postives = 180/270 (66.67%), Query Frame = 0 Query: 292 AVSYYTASGIAAVINFPLWKASAIGQSGFQLATLHPSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMIGR 562 A +Y+ ASG AAV+NFPLWKASA+GQSG+ TLH L ++ PP++GV A GM WARA IFYGS+KG+ LL Q GV + + A+P L ST VQ+ NMP+IR +I LQNP + + + + I K G LW G SAGI KTVPKY+TAV VK+ M++WL P D+ + ++LV R+A K+V AGLAGA LTNPLDV+RN F+ E S+ T++ L ++G RFL++G+GKN+VAV +PV+ TIFL D R Sbjct: 9 ATAYFCASGAAAVVNFPLWKASAMGQSGY---TLHAK------TMYGRMLESLQPPWRGVFAVMGGMTWARAAIFYGSDKGRHLL-QAAGVGHSASIALPPLAISTCVQVVNMPLIRCSIMLQNPTATQTSLWQMGKHIVHKRGFFALWHGLSAGIFKTVPKYVTAVYVKEMMDEWL--APVDSTDRTAVLV-RSAKKSVIAGLAGATLTNPLDVIRNTMFQTETSMFQTIKHLHAKKGWRFLYQGLGKNLVAVAVPVSLTIFLTDAFSR 265
BLAST of NO04G05170 vs. NCBI_GenBank
Match: XP_005773432.1 (hypothetical protein EMIHUDRAFT_435784 [Emiliania huxleyi CCMP1516] >EOD21003.1 hypothetical protein EMIHUDRAFT_435784 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 237.7 bits (605), Expect = 9.100e-59 Identity = 129/271 (47.60%), Postives = 175/271 (64.58%), Query Frame = 0 Query: 293 VSYYTASGIAAVINFPLWKASAIGQSGF--QLATLHPSLPXXXXXXXXXXLAAMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEE--VPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMI 560 +SY + +G+AA++NFPLWKA+AIGQSGF Q T L + PPYKGV AT GM WARA IFY ++ G++ + G A A A+PA+ ST VQ+ N PI+R TIT+Q+P+S + AL+ I++ G+ GLW GT + KTVPKY+ A+ VKD M++ L + P A RS ++Q +A+K++ AG+AGA LTNPLDV+RNE FK +++L T R L+ EGA FLWRGM +N+VAV P+ TIFL D I Sbjct: 10 ISYLSGAGLAALVNFPLWKAAAIGQSGFTAQGPTFFARLK-----------VLLGPPYKGVAATLFGMTWARAAIFYCADAGRDRMLA-LGASPAAATALPAVGISTLVQVVNQPIVRGTITIQDPSSRHAGLVAALRHIHATRGVSGLWHGTVPAVAKTVPKYVVAIWVKDAMQELLPKPTAPPGAPGHRSQVLQASAVKSIAAGVAGAALTNPLDVIRNEMFKTDEALGETTRRLLRREGASFLWRGMARNLVAVAAPIGMTIFLTDAI 268
BLAST of NO04G05170 vs. NCBI_GenBank
Match: OEU22869.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 224.6 bits (571), Expect = 8.000e-55 Identity = 121/220 (55.00%), Postives = 151/220 (68.64%), Query Frame = 0 Query: 343 AMAPPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNP---RSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMI 560 A APPYKG++ +GM WARA IF+GS+ GK +L Q V WA +P L ST VQ N PI+RA+ITLQNP S NT +++ IY+ G+ GLW GTSAGI+KTVPKY TAV+VKD MED L ++ D +P R L R+A K+ TAGLAGAVLTNPLDV+RNE FK +SL T+R L+ E G+ F RGM KN++AV IPV TIF D++ Sbjct: 13 AFAPPYKGMVGVISGMTWARAAIFWGSDYGKSVLQQTNQVDDFWATILPPLVVSTMVQCVNQPIVRASITLQNPDSGLPNTWASIKHIYTNHGLGGLWHGTSAGILKTVPKYCTAVLVKDFMEDRLPQID-DISSPTYDRDRLC-RSAAKSATAGLAGAVLTNPLDVIRNEMFKTNESLPKTIRRLINETGSGFATRGMAKNMIAVAIPVGCTIFFTDVL 230
BLAST of NO04G05170 vs. NCBI_GenBank
Match: EWM28919.1 (hypothetical protein Naga_100441g1 [Nannochloropsis gaditana]) HSP 1 Score: 213.0 bits (541), Expect = 2.400e-51 Identity = 107/118 (90.68%), Postives = 113/118 (95.76%), Query Frame = 0 Query: 448 MKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMIGRARGL 566 MKTVPKYMTAVVVKDKME+WL+ VP +ADN RSLLVQR+A+KAVTAGLAGAVLTNPLDVVRNECFKREQSL PTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLAD+I RARGL Sbjct: 1 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISRARGL 118
BLAST of NO04G05170 vs. NCBI_GenBank
Match: OEU20271.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 198.4 bits (503), Expect = 6.100e-47 Identity = 100/214 (46.73%), Postives = 142/214 (66.36%), Query Frame = 0 Query: 346 PPYKGVLATWAGMCWARATIFYGSEKGKELLSQHYGVKGAWAGAIPALFTSTFVQLCNMPIIRATITLQNPASPYQNTSEALQAIYSKGGIKGLWLGTSAGIMKTVPKYMTAVVVKDKMEDWLEEVPADADNPRSLLVQRAALKAVTAGLAGAVLTNPLDVVRNECFKREQSLRPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADMI 560 PPYKG +AT GM +ARA IFY S+ G +++ Q Y + + +P L ST VQ+ N PI+RAT+TLQ+P+ + N ++ IY+ G+ GLW GT+AG++KTVPKY+TA+ VKD E L + ++ ++ R+A+K+ AG+AGA LTNPLDV+RNE FK + L T R L E G +F+ RG+GKN++AV +PV TIF DM+ Sbjct: 10 PPYKGAMATVCGMTYARAAIFYLSDYGHDVMIQQYQLDEVTSTVLPPLVVSTIVQVINQPIVRATVTLQDPSYKHPNVWSCIKHIYNTHGLNGLWHGTTAGVLKTVPKYVTAIAVKDYAERSLPKPDRNSRTYDRDMLWRSAVKSSMAGIAGAALTNPLDVIRNEQFKTDFGLLKTTRSLWNELGYKFMIRGLGKNMIAVALPVGVTIFCTDML 223 The following BLAST results are available for this feature:
BLAST of NO04G05170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G05170 ID=NO04G05170|Name=NO04G05170|organism=Nannochloropsis oceanica|type=gene|length=3944bpback to top protein sequence of NO04G05170.2 >NO04G05170.2-protein ID=NO04G05170.2-protein|Name=NO04G05170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=476bpback to top protein sequence of NO04G05170.1 >NO04G05170.1-protein ID=NO04G05170.1-protein|Name=NO04G05170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=566bpback to top Synonyms
Publications
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