NO04G04990, NO04G04990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04990 vs. NCBI_GenBank
Match: EWM28894.1 (conserved oligomeric golgi complex subunit 3 [Nannochloropsis gaditana]) HSP 1 Score: 297.0 bits (759), Expect = 1.800e-76 Identity = 184/235 (78.30%), Postives = 199/235 (84.68%), Query Frame = 0 Query: 549 NLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAK-------LGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777 NL L DVL+RIA+DAQERLIY +ERVLRVEVEGFRPTP+DLEYP KLE YWEAK XXXXXXXXXXXXXXXXXXXXXXX G +G VLP+YATWFPTL+MTL+LLSKIYRAVE+HVFQ+MAQQALAAC S LA AKVLRE+KGD+DADLFLVKHLLILREQLVPFDIEFAAIEKRLDF STRGALTRFFVD +FR+G DNAL SLA+ SVPTVNEEEV Sbjct: 2 NLSPLRDVLERIAEDAQERLIYVAERVLRVEVEGFRPTPADLEYPGKLEAYWEAKRRGQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMGKVLPVYATWFPTLQMTLSLLSKIYRAVELHVFQEMAQQALAACTYSFLAAAKVLREQKGDMDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFNSTRGALTRFFVDRHNLFRMGTDNALLSLALGSVPTVNEEEV 236
BLAST of NO04G04990 vs. NCBI_GenBank
Match: XP_020696623.1 (conserved oligomeric Golgi complex subunit 3 isoform X1 [Dendrobium catenatum] >XP_020696624.1 conserved oligomeric Golgi complex subunit 3 isoform X1 [Dendrobium catenatum] >PKU70495.1 hypothetical protein MA16_Dca013531 [Dendrobium catenatum]) HSP 1 Score: 245.4 bits (625), Expect = 6.100e-61 Identity = 178/670 (26.57%), Postives = 293/670 (43.73%), Query Frame = 0 Query: 111 YVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKKSKH---AQEHLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTHF-EAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777 YV+TL + + + E+V+ +L N+++ L +VA + ++LH C RL+ E+ L L + +FDELE ++ S G+G+F +L R+D I++ ES+PQY +S YL K R LQ R LG++++ VL +L+S A+ AA + + E +E S +Y +F++ + ++ ++ I++R+ +E +L DC K Y +R +L+K + E A PS L R+G L ++CQLE QL++ FF S + ++ L+ LC L+D LRP VI + +LD LC L++ ++ E+L Q RG+ +L L +L RI D ERL + + +R E+ +RP+ DL+YP KLE++ A+ D ++ ++ TW+P L T++ LSK+Y +E +F +AQ+A+ C+ S+ G+K++ ++ +D LFL+KHLLILREQ+ PFDIEF+ I K LDF L R +F S A+ P + E ++ Sbjct: 109 YVNTLMEHIQICDGILEQVDETLNLFNELQTLQQSVATKTKTLHDACDRLLLEKQRLIDFAEALRSKLNYFDELENAS----------------------------------------------SNFYSPNLSIGNGQFLPLLKRLDDCISYVESNPQYAESAVYLVKFRQLQSRALGMIRSHVLSILKSADAQVQAAIRGSGSNKASVAEGVEESVIYVRFKAAASELKPILEEIESRSSRKE---------------YAHILTDCHKMYCEQRLSLVKSIVHQRISEFAKKEALPS---------------------LTRSGCAYLMQVCQLEHQLFDHFFPSSST---------------------------------------DVSNMAPLIDPLCTYLYDTLRPKVIYQANLDSLCELVDILKVEVLGDQLNRRGE-SLAALRPILQRILADVHERLTFCARTHIRDEIANYRPSDEDLDYPAKLEQH-------------------------------AVKASDTTVDDNSTIFGTWYPLLEKTVSCLSKLYHCLEPGIFTGLAQEAVEFCSISIQNGSKIITKKSSPMDGQLFLIKHLLILREQIAPFDIEFSVIHKELDFSHLLEHLRRILRGQASLFDWSRST---SFAMTLTPRILESQI 622
BLAST of NO04G04990 vs. NCBI_GenBank
Match: CBJ32946.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 240.7 bits (613), Expect = 1.500e-59 Identity = 283/783 (36.14%), Postives = 369/783 (47.13%), Query Frame = 0 Query: 115 LAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGI-----------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKKSKHAQE-HLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTHFEAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGP----------------------------------------PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANL-----------------------VYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVL---------------------------------------------RERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEVR 778 L Y +E ++ L+ I V + ++LH TC+ L+SEQH+LE + L+ P++ F L LGP LG+ G XXXXXXXXXXXXXXXXXXXXXXXXXXXXX PGS EFAE LAR A+A+ HP++ + Y+ K L R L LVK QV+ LE AAR K E LETS +Y++FRS S RV V L+ + ++ LL D R+ Y KR LL+P +++H E A S R A+ R GA L R+ QLE+QLY+ GP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E +G LL+ LC LH LRP V D+D LC L++ +REEI++ Q G + + +E +L ++ +D+QERLIY + +V++ ++ FRPTP DL+YP L AK G ++G GS P Y TW+P LR TL +LSK+YRAV++ VF+D+AQ ++AAC ESL A + G LDA LFL+KHLL LREQL PF I+F E++L+F STR AL +F T +FR+ + NAL L VDS+PT++E + R Sbjct: 104 LREYARTCQAFVADIERAVHLLDTIAQQQEQVTSKTQALHATCESLLSEQHTLEAQVKALSAPLQRFGALRELGPALGLPFASQSSAGGAGGEDGAPRRASVGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLHPGSDEFAEALARAASAMAYLRRHPEFIEGPQYVDKYVQLLSRALALVKNQVMEYLEQ------AARLSGEKPVVEGRLETSEIYSRFRSVSHRVNAGVALMRKYVSA--------------APLVKTLLSDFRQLYFEKRLALLRPAVRSHLE----AMSKQR----------------GITAMIRFGAAFLVRVGQLETQLYDACLGPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEEGRAGLYGMLLQ-LCSELHKHLRPRVYHGTDMDTLCELVSVIREEIVEEQRGRHGLSQINPVAXXXXXXXXXXXXXXXXXXXXAIETILMKLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLR--AAKGG----GTGDSLVNARTGPGDQPSPSSPPSSGKGS----APAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAAVSISAGVTAGSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLDAQLFLIKHLLTLREQLTPFHIQFVHAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEVQAR 835
BLAST of NO04G04990 vs. NCBI_GenBank
Match: GAQ88312.1 (oligomeric Golgi complex component 3 [Klebsormidium nitens]) HSP 1 Score: 240.7 bits (613), Expect = 1.500e-59 Identity = 203/784 (25.89%), Postives = 332/784 (42.35%), Query Frame = 0 Query: 2 SSSSSSPSSHSSAWEASLPTTDSQLQRLAILDAHIKDLFLIDKEEDEDKQSTVTNDYSPSFPQGKSEQPTTMWAGANRGRIEEFLRSLESESEGGIEGRKEGMTEAAGTYVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKKSKHAQ--------EHLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTHF-EAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777 +++ S + +S WE + P TD Q+ +++L + L + +++ N G++ ++ N + ++ LES +E E YV TL + + + +V+ +L +D++A + AVA + ++LH C+RL+ E+ L + L + +FDELE + + + + F +L R+D+ IA+ S+PQY DS YL K R LQ R LG V++ VL +L + + A K+ + ++ E ETS LY +F++ + ++ L+ ++ RA +E ++LL DC Y +R L+ ++ E A A PS L R+G L ++CQLE QL++ FF S E L+ L+ LC +L+D LRP I E DLD LC L++ ++ E+L Q +G+A + L +DR D QERL + ++ +R E+ + PTP DL+YP KLE+ + G A G + Y TW+P L TL+ LSK+YR V+ ++F +AQ+A++ C+ S+ +K + ++ G LD LF+VKHLLILREQ+ PFDI+FA K LDF + R +F + N L + P V E ++ Sbjct: 21 AAAVSKGYNFASTWEQNAPLTDDQVAIISLLAQASAERPLPPHVAGKGPEASDANGRPRDSSSGETSTSDSIL--HNTHQFYKWYSELESTMNFEME-------EKYRRYVDTLTTHLKTCDDIMAQVDETLGLFDDLQAQHAAVATKTQTLHDACERLVQEKERLVEFADALRTKLNYFDELETVA----------------------------------------------AQFHSPNLTVNNAHFLPLLKRLDECIAYVGSNPQYADSAVYLVKFRQLQSRALGTVRSHVLSVLRHASQQVQQAIKESASSSEGGRAANVAEGAETSLLYVRFKAAAPSLKALMEEMETRAARKE---------------YQQLLADCHGLYCEQRLALVAGVVQQRITEYAKAQSLPS---------------------LTRSGCAYLMQVCQLEHQLFDHFFPASSA---------------------------------------EPANLAPLIDPLCTVLYDTLRPRFIHEADLDLLCELVDILKAEVLDEQLGRKGEA-VAGLRPTVDRTLADVQERLTFRAQTYMRDEIANYNPTPDDLDYPAKLEKVPSTQ-------------------SEIQEEGAAGEDGQDA-------YTTWYPPLERTLSCLSKLYRCVDHNIFTGLAQEAISLCSMSIQRASKSIAKKAGSLDGQLFVVKHLLILREQIAPFDIDFAVTYKELDFSHMLEHMRRILRGQASIFAFSSSNGLVRVLSSGAPRVVENQI 647
BLAST of NO04G04990 vs. NCBI_GenBank
Match: OAE26098.1 (hypothetical protein AXG93_4022s1100 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 233.0 bits (593), Expect = 3.100e-57 Identity = 178/655 (27.18%), Postives = 281/655 (42.90%), Query Frame = 0 Query: 128 KVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKK-----SKHAQEHLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTHF-EAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777 +++++L+ +D++ + AVA + ++LH C+RL+ E+ L + L + FFDELE + + S SG+F +L R+D+ +++ ++PQY DS YL K R +Q R LG+V+T VL +L S + + A K E ETS LY +F++ + ++ ++ +++R +E Q +L DC Y +R +L++ + E A PS L R+G L ++CQLE QL++ FF S E+ L+ L+ LC L+D LRP +I E DLD LC LI+ ++ E+L Q RG+ ++ L + RI D QERL + ++ +R E+ + PT DL+YP KLE A TG + W+P L TL++LSK+YR +E +F +AQ A+ C+ S+ ++++ +R +D LFL+KHLL+LREQ+ PFDIEF+ K LDF L RFF +F + +A LA P V E +V Sbjct: 70 RLDSTLSRFDDLQEQHQAVATKTKTLHDACERLVMEKERLVEFADALRNKLNFFDELENIA----------------------------------------------TQFYAPTMSVASGQFLPLLKRLDECLSYVGNNPQYADSAVYLVKFRQIQSRALGMVRTHVLAVLRSASVQVQTAIKDSFGGNGRTSLSEGAETSVLYVRFKAAASELKIIMEELESRGSRKEYAQ---------------VLTDCHTLYCEQRLSLVQGVVSQRLSEYAKKEALPS---------------------LTRSGCAYLMQVCQLEHQLFDHFFPTSSA---------------------------------------EAATLAPLVDPLCTALYDTLRPRMIHEADLDLLCELIDILKGEVLDEQIGRRGE-SVAGLRPTILRILGDVQERLTFRAQTYMRDEIANYLPTTEDLDYPAKLE--------------------------------NAAETGGSEDDDGREALSVWYPPLEKTLSVLSKLYRCIEPAIFTGLAQDAVGVCSISIQRSSRLIAKRASPMDGQLFLIKHLLVLREQIAPFDIEFSVTHKELDFTHLLEHLRRFFRGQGHVFDFTSRSA---LARTFTPRVLENQV 567
BLAST of NO04G04990 vs. NCBI_GenBank
Match: XP_016556542.1 (PREDICTED: conserved oligomeric Golgi complex subunit 3-like [Capsicum annuum]) HSP 1 Score: 232.6 bits (592), Expect = 4.100e-57 Identity = 185/672 (27.53%), Postives = 298/672 (44.35%), Query Frame = 0 Query: 111 YVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKK--SKHA-QEHLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLK---THFEAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777 YV+TL + + ++V+ +L N+++ + AVA + ++LH C RL+ E+ L + L + +FDELE + ++ S GS F +L R+D+ I++ ES+PQY + YL K R LQ R LG++++ VL +L S +++ AA + SK + E +E+S +Y +F++ + ++ ++ I++RA +E Q LL++C K Y +R +L++ ++ + F A S L R+G L ++CQLE QL+N FF SS E + +L+ L+ LC L+D LRP +I E +LD LC L++ ++ E+L G+ L R +L L LDRI D ERL + + +R E+ + P+ DL+YP+KLE+ A+L G S + TW+P L T++ LSK+Y ++E VF +AQ+ + C+ S+ +K++ +R +DA LFL+KHLLILREQ+ PFDIEF+ K LDF L R +F SLA P V E ++ Sbjct: 154 YVNTLTEQIQTCDSILQQVDETLDLFNELQLQHQAVATKTKTLHDACDRLLLEKQKLIEFAESLHNKLNYFDELENVATTF----------------------------------------------YSPSMSVGSTNFLPLLKRLDECISYVESNPQYAECSIYLVKFRQLQSRALGMIRSHVLSVLRSTSSQVQAAIRSSGGSKTSFAEGIESSIIYVRFKAAANELKPILEEIESRAPRKEYIQ---------------LLEECHKLYCEQRLSLIRGIVQQRISEFSRKEALSS-----------------------LTRSGCSYLMQVCQLEHQLFNHFF-------------------------------------PSSSE--DISSLTPLVDPLCTFLYDTLRPKLIHETNLDVLCELVDILKVEVL-GEQLSRRGESLAGLRPTLDRILADVHERLTFRARTYIRDEIANYLPSDEDLDYPKKLEQSVSAEL------------------------------GSPSTEQNQDVSGTWYPPLEKTISCLSKLYCSLESAVFTGLAQEVVEFCSLSIQKASKLIGKRSSSMDAQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASIFDWSRST---SLARTLSPRVLESQI 668
BLAST of NO04G04990 vs. NCBI_GenBank
Match: PHT95829.1 (hypothetical protein T459_03711 [Capsicum annuum]) HSP 1 Score: 231.9 bits (590), Expect = 6.900e-57 Identity = 181/669 (27.06%), Postives = 294/669 (43.95%), Query Frame = 0 Query: 111 YVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKK--SKHA-QEHLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTHFEAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777 YV+TL + + ++V+ +L N+++ + AVA + ++LH C RL+ E+ L + L + +FDELE + ++ S GS F +L R+D+ I++ ES+PQY + YL K R LQ R LG++++ VL +L S +++ AA + SK + E +E+S +Y +F++ + ++ ++ I++RA +E Q LL++C K Y +R +L++ ++ +L R+G L ++CQLE QL+N FF SS E + +L+ L+ LC L+D LRP +I E +LD LC L++ ++ E+L G+ L R +L L LDRI D ERL + + +R E+ + P+ DL+YP+ LE+ A+L G S + TW+P L T++ LSK+Y ++E VF +AQ+ + C+ S+ +K++ +R +DA LFL+KHLLILREQ+ PFDIEF+ K LDF L R +F SLA P V E ++ Sbjct: 112 YVNTLTEQIQTCDSILQQVDETLDLFNELQLQHQAVATKTKTLHDACDRLLLEKQKLIEFAESLHNKLNYFDELENVATTF----------------------------------------------YSPSMSVGSTNFLPLLKRLDECISYVESNPQYAECSIYLVKFRQLQSRALGMIRSHVLSVLRSTSSQVQAAIRSSGGSKTSFAEGIESSIIYVRFKAAANELKPILEEIESRAPRKEYIQ---------------LLEECHKLYCEQRLSLIRGIVQQRIS--------------------EFSWTEALSSLTRSGCAYLMQVCQLEHQLFNHFF-------------------------------------PSSSE--DISSLTPLVDPLCTFLYDTLRPKLIHESNLDALCELVDILKVEVL-GEQLSRRGESLAGLRPTLDRILADVHERLTFRARTYIRDEIANYLPSDQDLDYPKMLEQSVSAEL------------------------------GSPSTEQNHDVSGTWYPPLEKTISCLSKLYCSLESAVFTGLAQEVVEFCSLSIQKASKLIGKRSSSMDAQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASIFDWSRST---SLARTLSPRVLESQI 626
BLAST of NO04G04990 vs. NCBI_GenBank
Match: XP_016549387.1 (PREDICTED: conserved oligomeric Golgi complex subunit 3 [Capsicum annuum]) HSP 1 Score: 231.5 bits (589), Expect = 9.100e-57 Identity = 181/669 (27.06%), Postives = 294/669 (43.95%), Query Frame = 0 Query: 111 YVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKK--SKHA-QEHLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTHFEAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777 YV+TL + + ++V+ +L N+++ + AVA + ++LH C RL+ E+ L + L + +FDELE + ++ S GS F +L R+D+ I++ ES+PQY + YL K R LQ R LG++++ VL +L S +++ AA + SK + E +E+S +Y +F++ + ++ ++ I++RA +E Q LL++C K Y +R +L++ ++ +L R+G L ++CQLE QL+N FF SS E + +L+ L+ LC L+D LRP +I E +LD LC L++ ++ E+L G+ L R +L L LDRI D ERL + + +R E+ + P+ DL+YP+ LE+ A+L G S + TW+P L T++ LSK+Y ++E VF +AQ+ + C+ S+ +K++ +R +DA LFL+KHLLILREQ+ PFDIEF+ K LDF L R +F SLA P V E ++ Sbjct: 112 YVNTLTEQIQTCDSILQQVDETLDLFNELQLQHQAVATKTKTLHDACDRLLLEKQKLIEFAESLHNKLNYFDELENVATTF----------------------------------------------YSPSMSVGSTNFLPLLKRLDECISYVESNPQYAECSIYLVKFRQLQSRALGMIRSHVLSVLRSTSSQVQAAIRSSGGSKTSFAEGIESSIIYVRFKAAANELKPILEEIESRAPRKEYIQ---------------LLEECHKLYCEQRLSLIRGIVQQRIS--------------------EFSWTEALSSLTRSGCAYLMQVCQLEHQLFNHFF-------------------------------------PSSSE--DISSLTPLVDPLCTFLYDTLRPKLIHESNLDALCELVDILKVEVL-GEQLSRRGESLAGLRPTLDRILADVHERLTFRARTYIRDEIANYLPSDQDLDYPKMLEQSVSAEL------------------------------GSPSTEQNHDVSGTWYPPLEKTISCLSKLYCSLESAVFTGLAQEVVEFCSLSIQKASKLIGKRASSMDAQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASIFDWSRST---SLARTLSPRVLESQI 626
BLAST of NO04G04990 vs. NCBI_GenBank
Match: XP_006828628.1 (conserved oligomeric Golgi complex subunit 3 isoform X2 [Amborella trichopoda] >ERM96044.1 hypothetical protein AMTR_s00129p00085100 [Amborella trichopoda]) HSP 1 Score: 229.6 bits (584), Expect = 3.400e-56 Identity = 201/762 (26.38%), Postives = 326/762 (42.78%), Query Frame = 0 Query: 2 SSSSSSPSSHSSAWEASLPTTDSQLQRLAILDAHIKDLFLIDKEEDED--KQSTVTNDYSPSFPQGKSEQPTTMW----AGANRGRIEEFLRSLESESEGGIEGRKEGMTEAAGTYVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKKSKHAQ----EHLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTH-FEAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMF 753 S++ S +S+WE + P T+ + + L + + E KQ T+ Y+ K T W N + ++ SLES + E E YV+TL + + +V+ +L+ +D++ + AVA + ++LH C+RL+ E+ L Q L + +FDELE + +++ + GSG F +L R+D+ I++ ES+PQY +S YL K R LQ R LG+V++ V+ +L+S ++ A + S H + E +E S LY +F++ + ++ ++ I++R+ +E Q L +C + Y +R +L+K ++ FE A PS L R+G L ++CQLE QL++ FF S + L+ L+ LC L+D+LRP +I E +LD LC LI+ ++ E+L G+ L R ++ L +DRI D ERL + ++ +R E+ + P DL+YP KLE E + + T D + ++ TW+P L TL+ LSK+YR +E VF +AQ + C+ SL +K++ +R +D LFL+KHLLILREQ+ PFDIEF+ K LDF L R +F Sbjct: 15 SAAVSKGYGFASSWEQNAPLTEQEKAAVIALSHAVTERPFPSNVSQEQIVKQENSTSVYT------KDNSLETPWPIEAVLVNSHQFYKWFTSLESAMKSETE-------EKYRQYVNTLTERIQTCDGILSQVDDTLSLFDDLQLQHQAVATKTKTLHDACERLVMEKERLVQFAEALRSKLNYFDELENVA----------------------------------------------TNFYSTNMNVGSGHFLPLLKRLDECISYVESNPQYAESSVYLVKFRQLQSRALGMVRSHVVSVLKSAASQVNIA-LRDSGHGKSALSEGVEASVLYVRFKAAASELKAVLEEIESRSSRKEYAQA---------------LAECHRLYCEQRLSLVKGIVQQRIFEFAKKEMLPS---------------------LTRSGCAYLMQVCQLEHQLFDHFFPSSSA---------------------------------------DVANLAPLIDPLCTYLYDILRPKLIHELNLDFLCELIDILKVEVL-GEQLGRRGESVAGLRPTVDRILADVHERLTFRAQTYVRDEIANYLPFDDDLDYPAKLERAAETR---------------------------SSTNADEN----SDIFKTWYPPLEKTLSCLSKLYRCLEPPVFTGLAQDTVEVCSTSLQKASKLVAKRSSPMDGQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLF 609
BLAST of NO04G04990 vs. NCBI_GenBank
Match: XP_006360886.2 (PREDICTED: conserved oligomeric Golgi complex subunit 3-like, partial [Solanum tuberosum]) HSP 1 Score: 229.2 bits (583), Expect = 4.500e-56 Identity = 183/672 (27.23%), Postives = 295/672 (43.90%), Query Frame = 0 Query: 111 YVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRAESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSRASPGSGEFAEVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLESGTAKTAAARKKK--SKHA-QEHLETSPLYTQFRSFSERVRELVHLIDARAGGREGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLK---THFEAAVAACSPSRXXXXXXXXXXXXXXXXXXXALARTGAVVLARICQLESQLYNDFFGPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQEYYESGALSQLLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGXXXXXXXXXXXXXXXXXXXXXXXGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777 YV+TL + + +V+ +L N+++ + AVA + +LH C RL+ E+ L + L + +FDELE + ++ S GS F +L R+D+ I++ ES+PQY + YL K R LQ R LG++++ VL +L S +++ AA + SK + E +E+S +Y +F++ + ++ ++ I++R +E Q LL++C K Y +R +L++ ++ + F A S L R+G L ++CQLE QL+N FF SS E + +L+ L+ LC L+D LRP +I E +LD LC L++ ++ E+L G+ L R +L L LDRI D ERL + + +R E+ + P+ DL+YP+KLE+ A+L S + TW+P L T++ LSK+Y ++E VF +A++A+ C+ S+ +K++ +R +DA LFL+KHLLILREQ+ PFDIEF+ K LDF L R +F SLA P V E ++ Sbjct: 37 YVNTLTEQIQTCDSILHQVDETLDLFNELQLQHQAVATKTRTLHDACDRLLLEKQKLIEFAESLHNKLNYFDELENVATTF----------------------------------------------YSPSMSVGSTNFLPLLKRLDECISYVESNPQYAECSIYLVKFRQLQSRALGMIRSHVLSVLRSTSSQVQAAIRSSGGSKTSFAEGIESSIIYVRFKAAANELKPILEEIESRTPRKEYIQ---------------LLEECHKLYCEQRLSLIRDIVQQRISEFSRKEALSS-----------------------LTRSGCAYLMQVCQLEHQLFNHFF-------------------------------------PSSSE--DISSLTPLVDPLCTFLYDTLRPKLIHETNLDVLCELVDILKVEVL-GEQLSRRGESLAALRPTLDRILADVHERLTFRARTYIRDEIANYLPSDEDLDYPKKLEQSVSAEL------------------------------DSPSTELNQDVSGTWYPPLEKTISCLSKLYCSLETAVFTGLAREAVEFCSLSIQKASKLIGKRSSSMDAQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASIFDWSRST---SLARTLSPRVLESQI 551 The following BLAST results are available for this feature:
BLAST of NO04G04990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04990 ID=NO04G04990|Name=NO04G04990|organism=Nannochloropsis oceanica|type=gene|length=6694bpback to top protein sequence of NO04G04990.1 >NO04G04990.1-protein ID=NO04G04990.1-protein|Name=NO04G04990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=990bpback to top protein sequence of NO04G04990.2 >NO04G04990.2-protein ID=NO04G04990.2-protein|Name=NO04G04990.2|organism=Nannochloropsis oceanica|type=polypeptide|length=813bpback to top protein sequence of NO04G04990.3 >NO04G04990.3-protein ID=NO04G04990.3-protein|Name=NO04G04990.3|organism=Nannochloropsis oceanica|type=polypeptide|length=786bpback to top Synonyms
Publications
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