NO04G04990.3, NO04G04990.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G04990.3
Unique Name	NO04G04990.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3341
Alignment location	chr4:1382393..1389018 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:1382393..1389018 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO04G04990.3 vs.
Match: EWM28894.1 (conserved oligomeric golgi complex subunit 3 [Nannochloropsis gaditana])

HSP 1 Score: 322.4 bits (825), Expect = 3.900e-84
Identity = 175/235 (74.47%), Postives = 195/235 (82.98%), Query Frame = 0

Query:  549 NLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGGREGG----KEGGKE---SKKEGEREEKKKGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEV 777
            NL  L DVL+RIA+DAQERLIY +ERVLRVEVEGFRPTP+DLEYP KLE YWEAK  G+EGG    KEGG+E   + KEGE   + + G      G +G VLP+YATWFPTL+MTL+LLSKIYRAVE+HVFQ+MAQQALAAC  S LA AKVLRE+KGD+DADLFLVKHLLILREQLVPFDIEFAAIEKRLDF STRGALTRFFVD   +FR+G DNAL SLA+ SVPTVNEEEV
Sbjct:    2 NLSPLRDVLERIAEDAQERLIYVAERVLRVEVEGFRPTPADLEYPGKLEAYWEAKRRGQEGGSQEGKEGGEEEGTAGKEGEGAAEAEEGMQALSSGGMGKVLPVYATWFPTLQMTLSLLSKIYRAVELHVFQEMAQQALAACTYSFLAAAKVLREQKGDMDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFNSTRGALTRFFVDRHNLFRMGTDNALLSLALGSVPTVNEEEV 236

The following BLAST results are available for this feature:

BLAST of NO04G04990.3 vs.

BLAST of NO04G04990.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
EWM28894.1	3.900e-84	74.47	conserved oligomeric golgi complex subunit 3 [Nann...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G04990	NO04G04990	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04990.3	NO04G04990.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04990.3.cds1	NO04G04990.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds2	NO04G04990.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds3	NO04G04990.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds4	NO04G04990.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds5	NO04G04990.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds6	NO04G04990.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds7	NO04G04990.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds8	NO04G04990.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds9	NO04G04990.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds10	NO04G04990.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds11	NO04G04990.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds12	NO04G04990.3.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds13	NO04G04990.3.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds14	NO04G04990.3.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds15	NO04G04990.3.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.3.cds16	NO04G04990.3.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:1382393..1389018+
coding sequence from alignment at chr4:1382393..1389018+

mRNA sequence

>NO04G04990.3 ID=NO04G04990.3|Name=NO04G04990.3|organism=Nannochloropsis oceanica|type=mRNA|length=3341bp
ATGTCGTCCTCTTCCTCCTCTCCCTCCTCCCACTCCTCGGCCTGGGAAGC
CTCCCTCCCCACGACCGACTCGCAACTCCAGCGTCTTGCCATCCTGGATG
CCCACATCAAGGATTTGTTTCTCATCGACAAGGAAGAGGACGAAGATAAG
CAATCCACCGTCACCAATGATTACTCCCCGTCGTTTCCCCAAGGCAAGAG
CGAGCAGCCTACAACGATGTGGGCAGGCGCCAACCGCGGCCGGATCGAGG
AATTCTTGAGGAGCCTCGAATCAGAGAGCGAAGGTGGCATCGAAGGCAGG
AAGGAAGGCATGACGGAAGCGGCAGGGACGTATGTGTCGACATTGGCGGC
GTACGAGGAGGGCTTAACTGTGGTCACTGAAAAAGTGGAGGCGTCGTTGG
CTTCCCTCAACGACATCGAAGCTCTCTATCACGCTGTAGCCCAGCGGGCC
GAATCTCTACACGGCACTTGTCAGCGATTGATTTCAGAGCAGCACTCCCT
CGAGCAGCGCAAGTCCCTGTTGGCGGGGCCAATGGAATTCTTCGACGAGC
TCGAACGCCTGGGACCCCTCTTGGGGATTGGGGGAACCGCTGCTGTTGGT
GGTGGTGGTGGTGGTGGGGCAGGGGGAGGGGGAGGGAAGGGAGGGAAGCC
CATGTCCTTGCCGGGACGAGGTGTGGTAGTATCGGGGGGAGGAGGGAGTG
GAGGGCTGCTGTTCACTTCGAGGGCTTCTCCGGGTAGTGGGGAATTCGCT
GAGGTGCTGGCGAGGGTCGATCAGGCCATTGCCTTCTTTGAGAGTCACCC
GCAGTACAAGGACAGTGGTGCTTACCTGACGAAGATGCGTGCTCTGCAGC
TCCGAGGCCTTGGACTGGTTAAGACTCAGGTCCTCCATCTCCTGGAGAGC
GGGACGGCCAAGACGGCTGCAGCTCGGAAGAAGAAGAGCAAGCACGCGCA
GGAGCACTTGGAGACATCGCCCCTCTACACCCAATTTAGATCCTTCTCTG
AGCGTGTGCGGGAACTGGTCCACCTCATCGATGCCCGTGCTGGAGGGAGG
GAGGGAAGACAGGGTGGACACGAGGAGGAGGGCGAGCACTCCGCCCGCCT
GGAGGAGCTCCTCGATGACTGCCGCAAGAGCTACACCCACAAGCGATGGA
CTCTCCTGAAGCCCTTCCTCAAAACGCACTTCGAGGCCGCTGTCGCTGCC
TGCTCCCCCTCCCGAAAAAGAGGGGAGGGAGGAGGAGGGAGGGGGGGAGG
AAGGGGGGGAGGAGATGCACCTGCTTTGGCCCGGACGGGCGCTGTGGTGC
TCGCTCGCATCTGTCAGCTGGAGTCGCAGCTCTACAATGACTTCTTCGGT
CCTCCCTCCCCCGCACGACCCGAGGAGGAGGAGGAGGACGAGGACGCCAC
CCCCCTCCACACTACCTCCTCCTCCTCCTCCTCCTCCAGCGTCCCTCGTC
CGTATCGATCGTCCTCACAAGAGTATTATGAGAGCGGCGCCCTCTCTCAG
TTGCTCCGCGGTTTGTGCCTGCTTCTCCACGATGTCCTCCGGCCACTGGT
CATTCAAGAGGGTGACCTCGACCGTCTCTGCACGCTCATCAATGCCGTGC
GAGAGGAGATTTTGCAGGGCCAGACACTCTTGCGAGGCGATGCCAATCTA
GTCTATCTGGAAGACGTATTGGATCGAATTGCCAAGGATGCCCAAGAGCG
GCTCATTTACGCCTCAGAGCGGGTTCTGCGGGTGGAAGTAGAGGGCTTTC
GACCCACTCCCTCGGACTTAGAATACCCGGAGAAGCTCGAGGAGTACTGG
GAAGCCAAGCTAGGAGGGAGGGAGGGGGGGAAGGAGGGAGGGAAGGAGAG
CAAAAAGGAGGGGGAAAGGGAGGAGAAGAAGAAAGGAGGGGCGTTGACGA
CGGGTGATGGCAGCATCGGCGCCGTCCTCCCTCTCTACGCCACTTGGTTC
CCTACCCTCCGCATGACCCTCACCCTCCTCAGCAAGATTTATCGGGCCGT
TGAAATCCACGTCTTTCAAGACATGGCGCAGCAGGCGCTGGCGGCCTGCA
ACGAGTCGCTGCTGGCGGGGGCCAAAGTCCTGAGGGAGAGAAAAGGAGAC
CTGGACGCCGATCTCTTCCTAGTCAAACACCTCCTCATCCTCCGGGAGCA
GCTCGTGCCCTTCGACATCGAATTTGCGGCCATCGAGAAGCGACTGGATT
TCAAGTCTACGCGAGGCGCCTTGACTCGCTTCTTCGTGGATACCCGGAAG
ATGTTCCGAGTCGGCGCAGACAATGCCCTCTACTCCCTGGCCGTCGACTC
GGTGCCCACCGTGAATGAGGAGGAGGTACGTCACGCATCGGTTGGATTCG
TTCATTGATCCATCAAACAATATGAGTATAATTACCATTGAAGGCGGAGA
AGATAAATGGCGAGGAGGGCAGGTCTTCGAAGGTTTTTTCCCTCACTCAT
CCACTCCAAACACACTTTCCCCTCGTTCCATTTCCCCCCCCTTCGTGTCC
CATTCCTTCCTTCTCGGTAGATCGCTCATCCACTCAATGCCTTCTCTCCC
TCCTGTGTCATTTCTCCATCTCCCTCTTTCTCTCCCTCTTCCTCCCCTTC
CTTCTCGGTAGATCGACTCCAAGAAACGGCTGGAGGACTCCCTCAAGGTG
GCTTGCAACACCTTCATCGAGCACGCCACCACCCACCTAGCCGAGCCCCT
CCAAACCCTCCTGCAAAAATCTCATGCCTTCCTCCCTTCCTCCTCTTCCT
CCTCCTCCCCATCTTCATCCACTCCCGATGCCGCCTCCCTCCTCACCCTA
TCCACGCAGTCTTTCCTTCAACCTGACCGTGTCCAGGCTACCTTTCTCTC
CGCCCACGAACGCCTAGCCACCTCCACCCCCCACCTCCTCCATCTCATGT
CCCTTTATCTCGATTATAACAGCAGCACCAAAGCCATTTTATTCCGGCCA
GTGCGTCAACGTGTGCTGAGCCTATTGCAGCAGCTGGCAGAATTGCTCAA
GCTACTGCCCGTGCCGTCGTCCTCCGAAGAGAGGACGGAGGCGACGTACG
AGGGAGAGAGGGAGGGATCAGGTTTATTGGAGACGGTGGAAGGGATGCTC
CTAAGCATGAAGCAGACTTTGAATAAGTTCACAGAGGCAAACGTGGATGG
ACCTATCGATGGGAGGGGAAGTCGGAGCAACAGCGCAGCGAATTCCCCGG
TGCGACAGGGAATGCAAGAGGTAGGAGATGGAAACAGTGTGGTGGCATCG
AATTGAGATGATAAATATGCACATGCATGCATGGACAGAGGATACTTTAC
CATTAGTTGACGTGCTTTGTGCAAAAGAAAAATTAATGAGT

protein sequence of NO04G04990.3

>NO04G04990.3-protein ID=NO04G04990.3-protein|Name=NO04G04990.3|organism=Nannochloropsis oceanica|type=polypeptide|length=786bp
MSSSSSSPSSHSSAWEASLPTTDSQLQRLAILDAHIKDLFLIDKEEDEDK
QSTVTNDYSPSFPQGKSEQPTTMWAGANRGRIEEFLRSLESESEGGIEGR
KEGMTEAAGTYVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRA
ESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGGTAAVG
GGGGGGAGGGGGKGGKPMSLPGRGVVVSGGGGSGGLLFTSRASPGSGEFA
EVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLES
GTAKTAAARKKKSKHAQEHLETSPLYTQFRSFSERVRELVHLIDARAGGR
EGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTHFEAAVAA
CSPSRKRGEGGGGRGGGRGGGDAPALARTGAVVLARICQLESQLYNDFFG
PPSPARPEEEEEDEDATPLHTTSSSSSSSSVPRPYRSSSQEYYESGALSQ
LLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANL
VYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYW
EAKLGGREGGKEGGKESKKEGEREEKKKGGALTTGDGSIGAVLPLYATWF
PTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGD
LDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRK
MFRVGADNALYSLAVDSVPTVNEEEVRHASVGFVH*

mRNA from alignment at chr4:1382393..1389018+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G04990.3 ID=NO04G04990.3|Name=NO04G04990.3|organism=Nannochloropsis oceanica|type=mRNA|length=6626bp|location=Sequence derived from alignment at chr4:1382393..1389018+ (Nannochloropsis oceanica)
ATGTCGTCCTCTTCCTCCTCTCCCTCCTCCCACTCCTCGGCCTGGGAAGC
CTCCCTCCCCACGACCGACTCGCAACTCCAGCGTCTTGCCATCCTGGATG
CCCACATCAAGGATTTGTTTCTCATCGACAAGGAAGAGGACGAAGATAAG
CAATCCACCGTCACCAATGATTACTCCCCGTCGTTTCCCCAAGGCAAGAG
CGAGCAGCCTACAACGATGTGGGCAGGCGCCAACCGCGGCCGGATCGAGG
AATTCTTGAGGAGGTAAGCGCAGGAGAAAAGGCAAAGAGGAAGAGAGACA
GCAGAAACTAGGTGGAAAACACGAAGGGAGTGAAGGGGAATACCATGGAT
CAGACGCATTGAGGCACGGTCATAATTCACCGCCAGATTGATCGTCATGG
GCCTGTTGAGATTATGACTCTCCCACCACCCACTGCCCCCTTACAGCCTC
GAATCAGAGAGCGAAGGTGGCATCGAAGGCAGGAAGGAAGGCATGACGGA
AGCGGCAGGGACGTATGTGTCGACATTGGCGGCGTACGAGGAGGGCTTAA
CTGTGGTCACTGAAAAAGTAAGGAAGGAGGGGAGGAAGCGAAGGAGAGAT
GGGAGGGCGGCGGATGGAACGAAAGGAGGTAAAAATGCAAAGACCGCCTC
AGAGCCGACAAGTATCCAAAATTTTTGTATCATGCGCTCTCATTGCACCC
ATCTCCTCCCTCTTTCCCCCCCTCCCTTCCCTCCCTCCCTGCCCAGGTGG
AGGCGTCGTTGGCTTCCCTCAACGACATCGAAGCTCTCTATCACGCTGTA
GCCCAGCGGGCCGAATCTCTACACGGCACTTGTCAGCGATTGATTTCAGA
GCAGGTAGAGAAGGAGGGAGGGAGGAAGGGATGGACCGTGCCTTTTCTCA
ACAAATGGATTGATTCACCGCTTGCACAAACCCCTTCCTCCCTCCCTCCA
TCCCTCCCTTCCTCCAGCACTCCCTCGAGCAGCGCAAGTCCCTGTTGGCG
GGGCCAATGGAATTCTTCGACGAGCTCGAACGCCTGGGACCCCTCTTGGG
GATTGGGGGAACCGCTGCTGTTGGTGGTGGTGGTGGTGGTGGGGCAGGGG
GAGGGGGAGGGAAGGGAGGGAAGCCCATGTCCTTGCCGGGACGAGGTGTG
GTAGTATCGGGGGGAGGAGGGAGTGGAGGGCTGCTGTTCACTTCGAGGGC
TTCTCCGGGTAGTGGGGAATTCGCTGAGGTGCTGGCGAGGGTCGATCAGG
CCATTGCCTTCTTTGAGAGTCACCCGCAGGTAGAGAGAGAGAGAGAAAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGGA
GGGAGGGTGGAAAGGCGTTGCCTTTGTTGTCCCCTTTTGTCCATCCACTC
ACGTTCGCGTCTCCCCCCCTCTTTCCCCTCTTCCCTCCCTCCCTCCTTCC
CTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCT
CCCTCTCTCCCTCCCTCCCTCCCTCAGTACAAGGACAGTGGTGCTTACCT
GACGAAGATGCGTGCTCTGCAGCTCCGAGGCCTTGGACTGGTTAAGACTC
AGGTCCTCCATCTCCTGGAGAGCGGGACGGCCAAGTAGGGAGGGAGGGAG
GGAAAGGAGGGAGCGAGGCCAGGACGGAAGGGAGGAGAAAGGGAAGGATG
ATGGATGGCGCCCCCACTCAGGCGTATCCCCCTGGCGGATGCATGGATAG
AGGGAGACTGGGAAGGAAGAAAGGGAGGGAGGAAGGAGCAATGACATCCT
TCTTATATATATATATGTATATATATATATTTACATATTTTTATATATAT
ATATATATATATATATATATATATATGTAAAATATATATATATATATATT
TACATATATATATATATATATGTACCTTACATCTTTCTCCACCCATGTCT
TACACATATGTCTTAGATAAACATGTATTTATGCATATAATGGCCTTACA
CCGTGTGTATACATATACACATACCATCCATGCATGGAACAGGACGGCTG
CAGCTCGGAAGAAGAAGAGCAAGCACGCGCAGGAGCACTTGGAGACATCG
CCCCTCTACACCCAATTTAGGTGCTGCTCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCTTTCCGTGTCCCTGTGGTCAACCCCCTCGTCACCTGCTCCCC
TCATCCTTTCTGACCTCTGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTTCTAGATCCTT
CTCTGAGCGTGTGCGGGAACTGGTCCACCTCATCGATGCCCGTGCTGGAG
GGAGGGAGGGAAGACAGGGTGGACACGAGGAGGAGGGCGAGCACTCCGCC
CGCCTGGAGGAGCTCCTCGATGACTGCCGCAAGGTGATTTATTTATCTTA
TTCCCTCCCTCCCTCCCTCTTTCCCTCCCTCCCTCCCTCCCTCTCTCCCT
CCCTCTCTCCCTCCCTTCCTTCTGTCCACCCCTCTCCCCCCCCCAAGGAC
CCAGCCACCTGATAAGTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CCGTTTCCCCTTCCTTCCATCACCTCTCCCTAGAGCTACACCCACAAGCG
ATGGACTCTCCTGAAGCCCTTCCTCAAAACGCACTTCGAGGCCGCTGTCG
CTGCCTGCTCCCCCTCCCGAAAAAGAGGGGAGGGAGGAGGAGGGAGGGGG
GGAGGAAGGGGGGGAGGAGATGCACCTGCTTTGGCCCGGACGGGCGCTGT
GGTGCTCGCTCGCATCTGTCAGCTGGAGTCGCAGGTACGTGGGAGGTCCC
TCCTTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCTTC
CCTGCCCCTCTAAACTCCACCCTCTCTTTTTCTCTTCACTTTTAAATCGC
ACGGCCAACCCCTCCCTCCCTCTTGCCCCCTTTCCCGCCCTCCCTCCCTC
CTAGCTCTACAATGACTTCTTCGGTCCTCCCTCCCCCGCACGACCCGAGG
AGGAGGAGGAGGACGAGGACGCCACCCCCCTCCACACTACCTCCTCCTCC
TCCTCCTCCTCCAGCGTCCCTCGTCCGTATCGATCGTCCTCACAAGAGTA
TTATGAGAGCGGCGCCCTCTCTCAGTTGCTCCGCGGTTTGTGCCTGCTTC
TCCACGATGTCCTCCGGCCACTGGTCATTCAAGAGGTAGTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCTT
CCTTTCTTCCTTCCTTCCCTCCTTCCCTCCCTCCTTCATTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCTCCTCCCCCCTTCCTTCACGCGAGCTCCCTG
TGAAATCCCTTCCGCCGTTTCACCCTGTCTAAAAACACTCCGCCCCCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCATCA
GGGTGACCTCGACCGTCTCTGCACGCTCATCAATGCCGTGCGAGAGGAGA
TTTTGCAGGGCCAGACACTCTTGCGAGGTAGGTAGGTAGGGAGGTAGGGA
GGTAGGGAGGGAGGGAGGGAGGTAGGGAGGTAGGGAGGGAGGGAGGGACA
ATTGCCGTCAGGTCTGAAAGTGACGGACAGACAAATCTTGAATCATCCTA
ATTCCACTTTAATCCTCCCTCCGTCCCTCCCTCCGTCCCTCCCTCCGTCC
CTCCCTCCCTCCCTCCAGGCGATGCCAATCTAGTCTATCTGGAAGACGTA
TTGGATCGAATTGCCAAGGATGCCCAAGAGCGGCTCATTTACGCCTCAGA
GCGGGTAGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAAAGAGGAAGGGGATCTGCCGCACTTTTTGCGACATGCATAGTTTCC
CATCTGAGCTTCCTCCCTTTCCCCCCCTTCCACCCTTCCTCCCCTCCTTT
CTCAGGTTCTGCGGGTGGAAGTAGAGGGCTTTCGACCCACTCCCTCGGAC
TTAGAATACCCGGAGAAGCTCGAGGAGTACTGGGAAGCCAAGCTAGGAGG
GAGGGAGGGGGGGAAGGAGGGAGGGAAGGAGAGCAAAAAGGAGGGGGAAA
GGGAGGAGAAGAAGAAAGGAGGGGCGTTGACGACGGGTGATGGCAGGTAG
GGAGGAAGAGAGGGAGGGGGAGGGAGGGAGGGAGGGGAGGGAGGGAGGGA
AGGAGGGGGGAATGAAGGTACACTTATGATTCCAACGATCTACCCATCGT
TTTTCGACTGCTTGTCCTGACATAACCCTCCCTTCCTCCCTCCCTCCCTC
CCTCCCTCCCCCCTCCCTCGCTCCCTCCTTCCCTTTTCAGCATCGGCGCC
GTCCTCCCTCTCTACGCCACTTGGTTCCCTACCCTCCGCATGACCCTCAC
CCTCCTCAGCAAGATTTATCGGGCCGTTGAAATCCACGTCTTTCAAGACA
TGGCGCAGCAGGTAGAGTGCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTTCCCTCTGCATGAGGAGGTATAGTGCCCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCTCTGCATGATCCTC
GCTCTGTGCAGCACGGCGGTTGGGGAGGGAGGGAGGGGGGAAGGGAGGAC
AGTCTCATCAAATCATCGCTTAAGACCTGTCATCCCAATGCAATGTAATC
ATAATTTCACATGTCTAATCACTCACATGAATATGATATGAATACGATTA
TATCCGGATCCGCCTTTGGGGTAGGCGCTGGCGGCCTGCAACGAGTCGCT
GCTGGCGGGGGCCAAAGTCCTGAGGGAGAGAAAAGGAGACCTGGACGCCG
ATCTCTTCCTAGTGAGTACTGCCTCCTCTCCCTCTCCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTTTCCCTTCACTTTCGA
AATTCTACTTCTCTTTCTCCTTTACTCTAAGCGAGCATGTTTCTCTCTTT
CTTTTCTTCTCCTTCCCTTTATACAAATATCTCTCTTTTCTGCTTTTGAC
TCTAAACGAGCCGTTGGCCCACACTTTCCTCCCTCCCTCCCCCCCTTTCT
CCCTCCCTCCCTTCCAAGGTCAAACACCTCCTCATCCTCCGGGAGCAGCT
CGTGCCCTTCGACATCGAATTTGCGGCCATCGAGAAGCGACTGGATTTCA
AGTCTACGCGAGGTAAAAAGGGAGTGAGGGGGGGAGGGATGGAGGGAGGG
ATGGGGGGAGGGGGGAAGGAAGAAGGACAAGCTTTTCCGACGTCCATCTT
CCTGAGCATTGTCGACGTACTGTCTCCATATACTTACTTGTCATATTTCC
TTCCTTCCTTCCCTTCCTCCCTCCTTCCCTCCTTCCCTTCCTTCCTCCAG
GCGCCTTGACTCGCTTCTTCGTGGATACCCGGAAGATGTTCCGAGTCGGC
GCAGACAATGCCCTCTACTCCCTGGCCGTCGACTCGGTGCCCACCGTGAA
TGAGGAGGAGGTACGTCACGCATCGGTTGGATTCGTTCATTGATCCATCA
AACAATATGAGTATAATTACCATTGAAGGCGGAGAAGATAAATGGCGAGG
AGGGCAGGTCTTCGAAGGTTTTTTCCCTCACTCATCCACTCCAAACACAC
TTTCCCCTCGTTCCATTTCCCCCCCCTTCGTGTCCCATTCCTTCCTTCTC
GGTAGATCGCTCATCCACTCAATGCCTTCTCTCCCTCCTGTGTCATTTCT
CCATCTCCCTCTTTCTCTCCCTCTTCCTCCCCTTCCTTCTCGGTAGATCG
ACTCCAAGAAACGGCTGGAGGACTCCCTCAAGGTGGCTTGCAACACCTTC
ATCGAGCACGCCACCACCCACCTAGCCGAGCCCCTCCAAACCCTCCTGCA
AAAATCTCATGCCTTCCTCCCTTCCTCCTCTTCCTCCTCCTCCCCATCTT
CATCCACTCCCGATGCCGCCTCCCTCCTCACCCTATCCACGCAGTCTTTC
CTTCAACCTGACCGTGTCCAGGCTACCTTTCTCTCCGCCCACGAACGCCT
AGCCACCTCCACCCCCCACCTCCTCCATCTCATGTCCCTTTATCTCGATT
ATAACAGCAGCACCAAAGCCATTTTATTCCGGCCAGTGCGTCAACGTGTG
CTGAGCCTATTGCAGCAGCTGGCAGAATTGCTCAAGCTACTGCCCGTGCC
GTCGTCCTCCGAAGAGAGGACGGAGGCGACGTACGAGGGAGAGAGGGAGG
GATCAGGTTTATTGGAGACGGTGGAAGGGATGCTCCTAAGCATGAAGCAG
ACTTTGAATAAGTTCACAGAGGCAAACGTGGATGGACCTATCGATGGGAG
GGGAAGTCGGAGCAACAGCGCAGCGAATTCCCCGGTGCGACAGGGAATGC
AAGAGGTAGGAGATGGAAACAGTGTGGTGGCATCGAATTGAGATGATAAA
TATGCACATGCATGCATGGACAGAGGATACTTTACCATTAGTTGACGTGC
TTTGTGCAAAAGAAAAATTAATGAGT

Coding sequence (CDS) from alignment at chr4:1382393..1389018+

>NO04G04990.3 ID=NO04G04990.3|Name=NO04G04990.3|organism=Nannochloropsis oceanica|type=CDS|length=2358bp|location=Sequence derived from alignment at chr4:1382393..1389018+ (Nannochloropsis oceanica)
ATGTCGTCCTCTTCCTCCTCTCCCTCCTCCCACTCCTCGGCCTGGGAAGC
CTCCCTCCCCACGACCGACTCGCAACTCCAGCGTCTTGCCATCCTGGATG
CCCACATCAAGGATTTGTTTCTCATCGACAAGGAAGAGGACGAAGATAAG
CAATCCACCGTCACCAATGATTACTCCCCGTCGTTTCCCCAAGGCAAGAG
CGAGCAGCCTACAACGATGTGGGCAGGCGCCAACCGCGGCCGGATCGAGG
AATTCTTGAGGAGCCTCGAATCAGAGAGCGAAGGTGGCATCGAAGGCAGG
AAGGAAGGCATGACGGAAGCGGCAGGGACGTATGTGTCGACATTGGCGGC
GTACGAGGAGGGCTTAACTGTGGTCACTGAAAAAGTGGAGGCGTCGTTGG
CTTCCCTCAACGACATCGAAGCTCTCTATCACGCTGTAGCCCAGCGGGCC
GAATCTCTACACGGCACTTGTCAGCGATTGATTTCAGAGCAGCACTCCCT
CGAGCAGCGCAAGTCCCTGTTGGCGGGGCCAATGGAATTCTTCGACGAGC
TCGAACGCCTGGGACCCCTCTTGGGGATTGGGGGAACCGCTGCTGTTGGT
GGTGGTGGTGGTGGTGGGGCAGGGGGAGGGGGAGGGAAGGGAGGGAAGCC
CATGTCCTTGCCGGGACGAGGTGTGGTAGTATCGGGGGGAGGAGGGAGTG
GAGGGCTGCTGTTCACTTCGAGGGCTTCTCCGGGTAGTGGGGAATTCGCT
GAGGTGCTGGCGAGGGTCGATCAGGCCATTGCCTTCTTTGAGAGTCACCC
GCAGTACAAGGACAGTGGTGCTTACCTGACGAAGATGCGTGCTCTGCAGC
TCCGAGGCCTTGGACTGGTTAAGACTCAGGTCCTCCATCTCCTGGAGAGC
GGGACGGCCAAGACGGCTGCAGCTCGGAAGAAGAAGAGCAAGCACGCGCA
GGAGCACTTGGAGACATCGCCCCTCTACACCCAATTTAGATCCTTCTCTG
AGCGTGTGCGGGAACTGGTCCACCTCATCGATGCCCGTGCTGGAGGGAGG
GAGGGAAGACAGGGTGGACACGAGGAGGAGGGCGAGCACTCCGCCCGCCT
GGAGGAGCTCCTCGATGACTGCCGCAAGAGCTACACCCACAAGCGATGGA
CTCTCCTGAAGCCCTTCCTCAAAACGCACTTCGAGGCCGCTGTCGCTGCC
TGCTCCCCCTCCCGAAAAAGAGGGGAGGGAGGAGGAGGGAGGGGGGGAGG
AAGGGGGGGAGGAGATGCACCTGCTTTGGCCCGGACGGGCGCTGTGGTGC
TCGCTCGCATCTGTCAGCTGGAGTCGCAGCTCTACAATGACTTCTTCGGT
CCTCCCTCCCCCGCACGACCCGAGGAGGAGGAGGAGGACGAGGACGCCAC
CCCCCTCCACACTACCTCCTCCTCCTCCTCCTCCTCCAGCGTCCCTCGTC
CGTATCGATCGTCCTCACAAGAGTATTATGAGAGCGGCGCCCTCTCTCAG
TTGCTCCGCGGTTTGTGCCTGCTTCTCCACGATGTCCTCCGGCCACTGGT
CATTCAAGAGGGTGACCTCGACCGTCTCTGCACGCTCATCAATGCCGTGC
GAGAGGAGATTTTGCAGGGCCAGACACTCTTGCGAGGCGATGCCAATCTA
GTCTATCTGGAAGACGTATTGGATCGAATTGCCAAGGATGCCCAAGAGCG
GCTCATTTACGCCTCAGAGCGGGTTCTGCGGGTGGAAGTAGAGGGCTTTC
GACCCACTCCCTCGGACTTAGAATACCCGGAGAAGCTCGAGGAGTACTGG
GAAGCCAAGCTAGGAGGGAGGGAGGGGGGGAAGGAGGGAGGGAAGGAGAG
CAAAAAGGAGGGGGAAAGGGAGGAGAAGAAGAAAGGAGGGGCGTTGACGA
CGGGTGATGGCAGCATCGGCGCCGTCCTCCCTCTCTACGCCACTTGGTTC
CCTACCCTCCGCATGACCCTCACCCTCCTCAGCAAGATTTATCGGGCCGT
TGAAATCCACGTCTTTCAAGACATGGCGCAGCAGGCGCTGGCGGCCTGCA
ACGAGTCGCTGCTGGCGGGGGCCAAAGTCCTGAGGGAGAGAAAAGGAGAC
CTGGACGCCGATCTCTTCCTAGTCAAACACCTCCTCATCCTCCGGGAGCA
GCTCGTGCCCTTCGACATCGAATTTGCGGCCATCGAGAAGCGACTGGATT
TCAAGTCTACGCGAGGCGCCTTGACTCGCTTCTTCGTGGATACCCGGAAG
ATGTTCCGAGTCGGCGCAGACAATGCCCTCTACTCCCTGGCCGTCGACTC
GGTGCCCACCGTGAATGAGGAGGAGGTACGTCACGCATCGGTTGGATTCG
TTCATTGA

Synonyms

Publications