NO04G04810, NO04G04810 (gene) Nannochloropsis oceanica

Overview
NameNO04G04810
Unique NameNO04G04810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3749
Alignment locationchr4:1311978..1315726 +

Link to JBrowse

Properties
Property NameValue
Description2-isopropylmalate synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1311978..1315726 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038522-isopropylmalate synthase activity
GO:0016740transferase activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0009098leucine biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR036230LeuA_allosteric_dom_sf
IPR000891PYR_CT
IPR0137092-isopropylmalate_synth_dimer
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of NO04G04810 vs. NCBI_GenBank
Match: EWM28880.1 (2-isopropylmalate synthase [Nannochloropsis gaditana])

HSP 1 Score: 945.3 bits (2442), Expect = 1.000e-271
Identity = 491/586 (83.79%), Postives = 532/586 (90.78%), Query Frame = 0 
Query:   57 PRSTSTSRPRHSSPFLWRHHAVRSSKPTIRMMATTVSKXXXXXXXXNPQDDDIVRPIPTRHDIETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALN 643
            P + S+     S+P   R +AV S K  +R MATT++         +P + D+VRP+PTRHD ETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEK+QVA+QL++LGVD+IEAGFPIAS GDFDAV+RIA++VGN  NPPIICGLARAL KDIETCW AVK+AAFPRIHTFIATSDIHM HKLKKSR +VL ITREMVTYARSLCEDVEFSAEDALRSDPAFLY+VYSVAVEAGATTLNVPDTVGYTTPSEFK+LIRGLRANVKG++GVTISVHGHDDLGMAVANFMAAI GGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGR PE E+ALTNI TTEI+KTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDG+LKNKSTYEIMDAESIGLAKNGLVLGKHSGR AFRSRLTELGYE+L+DAELNKAFVRFKEVADKKKEITNLDLESIVN+EMRL +DAG +EL+RCQVICGDSQVPTATI LLNKE N+E+ +AATGTGPVDAAYVAVTKALGI+KIKLLEF VSSVTAGIDALGEVTVRLEDLS+G IYYGRSANTDVV A    +LS L+
Sbjct:  119 PSAKSSPSFSSSAPRFARPNAVVSGKRVLR-MATTLT-DASSSDVISPAELDVVRPVPTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAGV-LFLSTLS 701
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BLAST of NO04G04810 vs. NCBI_GenBank
Match: XP_005715553.1 (2-isopropylmalate synthase [Chondrus crispus] >CDF35734.1 2-isopropylmalate synthase [Chondrus crispus])

HSP 1 Score: 736.1 bits (1899), Expect = 9.500e-209
Identity = 371/546 (67.95%), Postives = 455/546 (83.33%), Query Frame = 0 
Query:  114 PTRHDIETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKAL-GIDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAVSRGSLPLHPQFG 659
            PT+HDI TGRDP RVKIFDTTLRDGEQSPG ++TA+EK+ +ARQL++LGVD+IEAGFPIAS GDF AV+ IA++VGN  NPPIICGLARAL KDI  C+EAVKHAAFPRIHTFIATSD+HM +KLKK+R +V+EIT+E VTYARSLCEDVEFSAEDA+RSDP FL EV+S A+EAGATT+NVPDTVGYTTPSEF SLIR LR NV+GI  VTISVHGHDDLGMAVANF++A+E GARQ+ECTINGIGERAGNA+LEE+VMALHVR+ FYN R G+  + +  LTNI   EI+ TSR+VS LTGM++QPNKAIVGANAFAHESGIHQDG+LK++ TYEIMDA+SIGL++N +VLGKHSGR AFR+RL  +GYE +TD EL +AF RFKE+AD KKE++  DL+S+VNDE+RL  +A   +L R Q+ CG   +PTATIGL+  + + E  + +TGTGPVD+AY A+ + +  I  + LLE+ VSSV+ GIDALGEV VR++D +TG  Y G +ANTD+VVA+ QAY++A+NR  ++     +HPQ+G
Sbjct:   18 PTKHDIATGRDPDRVKIFDTTLRDGEQSPGASLTADEKMVIARQLAKLGVDVIEAGFPIASEGDFTAVREIAKSVGNRDNPPIICGLARALEKDISRCYEAVKHAAFPRIHTFIATSDLHMAYKLKKTREEVVEITKETVTYARSLCEDVEFSAEDAIRSDPDFLCEVFSAAIEAGATTINVPDTVGYTTPSEFASLIRYLRRNVRGIDDVTISVHGHDDLGMAVANFLSAVENGARQMECTINGIGERAGNASLEEVVMALHVRRQFYNARMGKDNKVDAPLTNIVHKEIHHTSRMVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKHRQTYEIMDAQSIGLSENSIVLGKHSGRHAFRTRLVNMGYE-VTDEELERAFRRFKELADIKKEVSEADLQSLVNDEVRLVKEA--VKLTRIQIQCGYHIIPTATIGLILVDDDAEKTVTSTGTGPVDSAYNAINQVIEDIIHVTLLEYKVSSVSKGIDALGEVAVRVQDGATGNQYIGAAANTDIVVASVQAYVNAINRCQLNNKKPKIHPQYG 560
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BLAST of NO04G04810 vs. NCBI_GenBank
Match: OSX76579.1 (hypothetical protein BU14_0184s0006 [Porphyra umbilicalis])

HSP 1 Score: 728.0 bits (1878), Expect = 2.600e-206
Identity = 379/559 (67.80%), Postives = 449/559 (80.32%), Query Frame = 0 
Query:  114 PTRHDIETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATI--------------GLLNKETNEEIIMAATGTGPVDAAYVAVTKALG-IDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAV-SRGSLPLHPQ 657
            PT+HD+ TGRDP RVKIFDTTLRDGEQSPG T+T EEK+ +ARQL++LGVD+IEAGFPIAS GDF AV  IA+TVGN  +PPIICGLARAL  DI+ CWEA+K AAFPRIHTFIATSD+HM+HKLKKSRA+VL I + MVT+ARSLCEDVEFSAEDA+RSDP FLYEV+SVAV AGATTLNVPDTVGYTTP EF  LIRG+RANV G++ VTISVHGHDDLGMAVANF++A+E GARQ+ECTINGIGERAGNAALEE+VMALHVR+++YN R GR       LTNI  TEIY+TSRLVS+LTGM++QPNKAIVGANAF+HESGIHQDG+LKN  TYEIMDA+S+GL  N +VLGK SGR AFRSRLTELGYE L+D E+N+AFVRFKE+AD KK +++ D+ESIVNDE+R   DA    L R QV CG+  VPT+T+              G      + E+  +ATGTGPVDA + A+  A+G +  + L E+ VSSVT GIDALGEVTVR+ D +TG  Y G S++TDVVVA+  AY+ A+NR  + + G  P+HPQ
Sbjct:   70 PTKHDLATGRDPNRVKIFDTTLRDGEQSPGATLTGEEKMIIARQLAKLGVDVIEAGFPIASVGDFRAVHAIAETVGNRPDPPIICGLARALTADIDRCWEAIKPAAFPRIHTFIATSDVHMEHKLKKSRAEVLAIAKAMVTHARSLCEDVEFSAEDAIRSDPEFLYEVFSVAVAAGATTLNVPDTVGYTTPFEFSKLIRGIRANVVGVENVTISVHGHDDLGMAVANFLSAVESGARQMECTINGIGERAGNAALEELVMALHVRRNYYNSRLGRVVGGP-PLTNINHTEIYQTSRLVSSLTGMLVQPNKAIVGANAFSHESGIHQDGVLKNPETYEIMDAKSVGLKDNSMVLGKLSGRHAFRSRLTELGYE-LSDEEINRAFVRFKELADTKKTVSSWDIESIVNDEVR-AVDAPRVALHRVQVSCGNLSVPTSTVTLSVVSGAAMPRMSGSPEPMADGEVTQSATGTGPVDATFKAINAAVGELVDVALEEYTVSSVTKGIDALGEVTVRVRDGATGRRYTGNSSDTDVVVASAMAYVRAINRCTIAAEGPEPIHPQ 625
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BLAST of NO04G04810 vs. NCBI_GenBank
Match: XP_005821098.1 (2-isopropylmalate synthase [Guillardia theta CCMP2712] >EKX34118.1 2-isopropylmalate synthase [Guillardia theta CCMP2712])

HSP 1 Score: 725.7 bits (1872), Expect = 1.300e-205
Identity = 379/588 (64.46%), Postives = 467/588 (79.42%), Query Frame = 0 
Query:   80 SSKPTIRMMATTVSKXXXXXXXXNPQDDDIVRPIPTRHDIETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGL-AKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKALGID--------KIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAVSRGSL--PLHPQ 657
            SS PT R       +           +   +   P++HD+ETGRDP RVK+FDTTLRDGEQSPGC+MT++EK+QVA+QL+R+GVD+IEAGFPIAS  DF AVK+IA  VGN  NPPIICGLARA   DI  C +AVK A FPRIHTFIATSDIHM+HKL+KSR +VL+IT++MVT A+SL +DVEFSAEDALRSD AFL +V+SVA++AGATT+NVPDTVG+TTP+EFK  I  LR + +GI+ VTISVHGHDDLGMAVANF+ AIEGGARQVE T+NGIGERAGNAA+EE+VMALHVRKS+YNP FGR  +S  ALTNI   EI+++SRLV++LTGM++QPNKAIVGANAFAHESGIHQDGMLKNK TYEI+DA +IGL   +G+VLGKHSGRAAF++RL +LG   L + E NKAF+RFK++ADKKKEITN DLESIVNDE + +  A  F+++  QV CG S VPTAT+ L +++ + E+  A+TGTGPVDAA+ AV +  GI          +KL+E++VSSVTAGIDALGEVTVRL+D  +G ++ GR+A+TDVVVA+  AY++ALNR+ + R  L   LHPQ
Sbjct:   58 SSPPTARCRGMRFVRPGSLRMSGGEMNMKPINVKPSKHDLETGRDPTRVKVFDTTLRDGEQSPGCSMTSDEKMQVAKQLARMGVDVIEAGFPIASNDDFLAVKQIADVVGNYENPPIICGLARATEGDIRRCADAVKGARFPRIHTFIATSDIHMEHKLRKSREEVLKITKQMVTLAKSLVDDVEFSAEDALRSDRAFLAQVFSVAIKAGATTINVPDTVGFTTPTEFKETIEYLRKHTEGIEDVTISVHGHDDLGMAVANFLGAIEGGARQVEVTVNGIGERAGNAAMEEVVMALHVRKSYYNPMFGRPADSNDALTNIVLKEIHRSSRLVTSLTGMMVQPNKAIVGANAFAHESGIHQDGMLKNKLTYEIIDASTIGLDNSDGIVLGKHSGRAAFKARLADLGI-VLNEDETNKAFIRFKDLADKKKEITNADLESIVNDEAQ-DLAANRFKVMHVQVTCGISMVPTATVTLRDEKDDLELTDASTGTGPVDAAFQAVNRLCGIQGGGQANAADVKLMEYSVSSVTAGIDALGEVTVRLQDPRSGRVFLGRAADTDVVVASCVAYVNALNRLILQRSDLAPKLHPQ 643
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BLAST of NO04G04810 vs. NCBI_GenBank
Match: XP_005704188.1 (2-isopropylmalate synthase [Galdieria sulphuraria] >EME27668.1 2-isopropylmalate synthase [Galdieria sulphuraria])

HSP 1 Score: 713.8 bits (1841), Expect = 5.100e-202
Identity = 360/544 (66.18%), Postives = 443/544 (81.43%), Query Frame = 0 
Query:  114 PTRHDIETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVA-VSRGSLPLHPQ 657
            PT+HD+ TGRDP RVK FDTTLRDGEQSPG T+T EEK+ +ARQL++LGVDIIEAGFP+AS GDF+AV+ IA+TVG   NPPIICGLARA+  DI  CWEAVK AAF RIHTFIATSDIHM+HKLKKSR+QVLE     V YA+SLCED+EFSAEDA RSDP FLYEV+S A+EAGATT+NVPDTVGYTTP+EF SL+RG+R NV+GI+ V +SVHGHDDLG+AV+NF++AIE GA+QVECT+NGIGERAGNA+LEEIVMAL+VR+ +YN + GR P+    LT + T EI+KTS+LVS LTGM++QPNKAIVG+NAFAHESGIHQDG+LKN+ TYEIMDA  IG+ +N LVLGKHSGR AFR RL ELG++ LT+ ELN+AFVRFKE+ADKKKE+T  DLESIVNDE+RL+      +L R QV CGD  + TAT+ +++ E + E+   + GTGPVDAA+ A+    G+ K+ L E+ V+S+T GIDALGEVTVR+   +    + G +ANTD+VVA+ QAY++ALNR+A  ++    +HPQ
Sbjct:  118 PTKHDLVTGRDPTRVKFFDTTLRDGEQSPGATLTGEEKLVIARQLAKLGVDIIEAGFPVASNGDFEAVRNIARTVGTRENPPIICGLARAVESDIARCWEAVKDAAFARIHTFIATSDIHMEHKLKKSRSQVLETVTRTVQYAKSLCEDIEFSAEDATRSDPEFLYEVFSRAIEAGATTINVPDTVGYTTPAEFGSLMRGIRRNVRGIENVCLSVHGHDDLGLAVSNFLSAIENGAQQVECTVNGIGERAGNASLEEIVMALYVRRQYYNNKLGR-PDPNALLTCVDTQEIWKTSKLVSNLTGMIVQPNKAIVGSNAFAHESGIHQDGILKNRLTYEIMDARLIGMQENQLVLGKHSGRHAFRKRLGELGFD-LTEDELNRAFVRFKELADKKKEVTLWDLESIVNDEVRLQ-GTEYLKLERVQVQCGDKLISTATVTIMHMELSRELTAVSIGTGPVDAAFKALNSIEGVPKVVLQEYMVNSITQGIDALGEVTVRIRGETDSRSFIGSAANTDIVVASVQAYVNALNRLARYAQYPKSVHPQ 658
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BLAST of NO04G04810 vs. NCBI_GenBank
Match: CBN74373.1 (2-Isopropylmalate synthase [Ectocarpus siliculosus])

HSP 1 Score: 666.4 bits (1718), Expect = 9.300e-188
Identity = 356/513 (69.40%), Postives = 416/513 (81.09%), Query Frame = 0 
Query:  146 MTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKN-GLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAVSRGSL-PLHPQ 657
            MT EEK+ VA+QL +LGVDIIEAGFPIAS GDF+AV+ IA  VG   NPPIICGLARAL KDI+ C  AV  A FPRIHTFIATSDIHM+HKLKKSR QVLEITREMVT+ARS  +DVEFSAEDALRSD  FL +VYSVA+EAGATT+NVPDTVGYTTP EF  L+  LR  V+GI  VTISVHGHDDLGMAVANFM+AIEGGARQVECTINGIGERAGNAALEEIVMALHVRK++YNP F R   SE ALTNI T EI K+S+LVS++TGM++Q NKAIVGANAF+HESGIHQDG+LKNK TYEIMDAE +GL ++  LVLGKHSGR AFRSRL E GY SLTD ELN+AF+RFK++ADKKKEIT+LDL SIVNDE+R + +   +ELV  QV  G +  PTAT+ L + +  +E  +AA GTGPVDAAY A+   +G    KLLE++V+SVTAGIDALGEVTVR++D  +   Y G++A+TDV+ A+ +AYL A+NR+  +RG     HPQ
Sbjct:    1 MTREEKLMVAKQLGKLGVDIIEAGFPIASQGDFEAVQEIATVVGQGGNPPIICGLARALKKDIDVCANAVAPARFPRIHTFIATSDIHMKHKLKKSREQVLEITREMVTHARSHVDDVEFSAEDALRSDYDFLSKVYSVAIEAGATTINVPDTVGYTTPKEFMGLMHHLRGTVRGIDKVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKAYYNPSFDRPVLSETALTNIKTKEIVKSSKLVSSMTGMMVQANKAIVGANAFSHESGIHQDGVLKNKETYEIMDAELVGLHQDTSLVLGKHSGRHAFRSRLQETGY-SLTDDELNRAFLRFKDLADKKKEITSLDLASIVNDEIR-DVNIRRYELVGMQVAAGTTNKPTATVTLYDTDLEKEGCVAAIGTGPVDAAYKAIDDIVGTRSTKLLEYSVASVTAGIDALGEVTVRVQDELSKREYIGKAADTDVIHASAEAYLHAVNRLLSNRGQPDKAHPQ 511
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BLAST of NO04G04810 vs. NCBI_GenBank
Match: WP_106173200.1 (2-isopropylmalate synthase [filamentous cyanobacterium CCP2] >PSB14956.1 2-isopropylmalate synthase [filamentous cyanobacterium CCP2])

HSP 1 Score: 665.6 bits (1716), Expect = 1.600e-187
Identity = 350/536 (65.30%), Postives = 425/536 (79.29%), Query Frame = 0 
Query:  127 RVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRV--AVSRGSLPLHPQFGKI 661
            R+ IFDTTLRDGEQSPG T+  EEK+ +ARQL+RLGVD+IEAGFP ASPGDF+AV++IAQ VG T + P ICGLARA  +DIET   A+K AA PRIHTFIATSDIH+++KLKK+R++VL IT EMV YA+S  +DVEFS EDA RS+PAFLYEV   A+ AGATT+N+PDTVGY TPSEF  LI+G++ NV  +    ISVHGH+DLG+AVANF+ A++ GARQ+ECTINGIGERAGNAALEE+VMALHVR+ FYNP  GR PESE  LTNI T +IYKTSRLVS LTGM++QPNKAIVGANAFAHESGIHQDG+LK+K TYEIMDA+SIGL  N +VLGKHSGR AFRSRL ELGYE L D ELN+AF+RFKE+ADKKKE+T+ DLE+IVNDE +   +   F+L   QV CGD   PTAT+ L   +   E+  AA GTGPVDA Y A+ + + I   +L+EF+V SVTAGIDA+GEVT+RL+      I+ G  ANTD++VA+ QAY++ALNR+  A+  G   +HPQ G++
Sbjct:   10 RIIIFDTTLRDGEQSPGATLNVEEKLAIARQLARLGVDVIEAGFPFASPGDFEAVQKIAQQVG-TADGPTICGLARATQQDIETAANALKPAAKPRIHTFIATSDIHLEYKLKKTRSEVLAITEEMVAYAKSFVDDVEFSPEDAGRSEPAFLYEVLERAIAAGATTINIPDTVGYLTPSEFGRLIKGIKENVPNVDQAIISVHGHNDLGLAVANFLEAVKNGARQLECTINGIGERAGNAALEELVMALHVRRQFYNPFLGRPPESEAPLTNIDTRQIYKTSRLVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKHKLTYEIMDAQSIGLTDNQIVLGKHSGRNAFRSRLKELGYE-LGDQELNRAFLRFKELADKKKEVTDWDLEAIVNDEAQQVPEL--FKLEHVQVSCGDHSRPTATVTLRTPD-GRELTDAAIGTGPVDAVYKAINRVVEIPN-QLIEFSVQSVTAGIDAIGEVTIRLK--YEDRIFSGHGANTDIIVASAQAYVNALNRLFAAIQHGK-SIHPQHGEV 536
[Close]
BLAST of NO04G04810 vs. NCBI_GenBank
Match: WP_006618368.1 (2-isopropylmalate synthase [Arthrospira platensis] >BAI87945.1 2-isopropylmalate synthase [Arthrospira platensis NIES-39] >AMW26664.1 2-isopropylmalate synthase [Arthrospira platensis YZ])

HSP 1 Score: 665.2 bits (1715), Expect = 2.100e-187
Identity = 346/523 (66.16%), Postives = 425/523 (81.26%), Query Frame = 0 
Query:  125 PMRVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAVS 648
            P RV IFDTTLRDGEQ PG T+  +EK+ +ARQL+RLGVD+IEAGF IAS GDF+AV+RIA+TVG T N PIIC LAR++  DIE   +A+K AA PRIHTFIATSDIH+++KLKK+R +VL+IT EMV YA+SLCED+EFS EDA RSDP FLY+V   A+ AGATT+N+PDTVGYTTPSEF  LIRG++ NV  I    ISVHGH+DLG+AVANF+ A++ GARQ+ECTINGIGERAGNAALEE+VMALHVR+ F+NP FGR  +SE+ +TNI T EIYKTSRLVS LTGM++QPNKAIVGANAFAHESGIHQDG+LKNK TYEIMDA+SIGL  N +VLGKHSGR AF++RL ELG++ L+D E+NKAFVRFK+VADKKKE+TN D+E+IVNDE++   +    ELV  QV CG++  PTAT+ L   E  +E+  AATGTGPVDA Y A+ + + +   +L+EFAV SVTAGIDA+GEVT+RL     G ++ G +ANTD++VA+ QAY++ALNR+  S
Sbjct:    7 PDRVIIFDTTLRDGEQCPGATLNVDEKLVIARQLARLGVDVIEAGFAIASSGDFEAVQRIAETVG-TENGPIICSLARSVKADIEAAAKALKPAAHPRIHTFIATSDIHLKYKLKKTRQEVLDITSEMVAYAKSLCEDIEFSPEDAGRSDPEFLYQVLERAIAAGATTVNIPDTVGYTTPSEFGGLIRGIKENVPNIDQAIISVHGHNDLGLAVANFLEAVKNGARQLECTINGIGERAGNAALEELVMALHVRRQFFNPFFGRPADSEVPITNINTREIYKTSRLVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIMDAQSIGLNDNLIVLGKHSGRHAFQNRLQELGFD-LSDDEINKAFVRFKDVADKKKEVTNWDIEAIVNDEIQQTPELFRLELV--QVSCGNNARPTATVTLRTPE-GQELTDAATGTGPVDAVYKAINRVVNVPN-ELIEFAVQSVTAGIDAIGEVTIRLR--YQGRVFSGHAANTDIIVASAQAYINALNRLQSS 521
[Close]
BLAST of NO04G04810 vs. NCBI_GenBank
Match: KDR56307.1 (2-isopropylmalate synthase [Arthrospira platensis str. Paraca])

HSP 1 Score: 665.2 bits (1715), Expect = 2.100e-187
Identity = 346/523 (66.16%), Postives = 425/523 (81.26%), Query Frame = 0 
Query:  125 PMRVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAVS 648
            P RV IFDTTLRDGEQ PG T+  +EK+ +ARQL+RLGVD+IEAGF IAS GDF+AV+RIA+TVG T N PIIC LAR++  DIE   +A+K AA PRIHTFIATSDIH+++KLKK+R +VL+IT EMV YA+SLCED+EFS EDA RSDP FLY+V   A+ AGATT+N+PDTVGYTTPSEF  LIRG++ NV  I    ISVHGH+DLG+AVANF+ A++ GARQ+ECTINGIGERAGNAALEE+VMALHVR+ F+NP FGR  +SE+ +TNI T EIYKTSRLVS LTGM++QPNKAIVGANAFAHESGIHQDG+LKNK TYEIMDA+SIGL  N +VLGKHSGR AF++RL ELG++ L+D E+NKAFVRFK+VADKKKE+TN D+E+IVNDE++   +    ELV  QV CG++  PTAT+ L   E  +E+  AATGTGPVDA Y A+ + + +   +L+EFAV SVTAGIDA+GEVT+RL     G ++ G +ANTD++VA+ QAY++ALNR+  S
Sbjct:    5 PDRVIIFDTTLRDGEQCPGATLNVDEKLVIARQLARLGVDVIEAGFAIASSGDFEAVQRIAETVG-TENGPIICSLARSVKADIEAAAKALKPAAHPRIHTFIATSDIHLKYKLKKTRQEVLDITSEMVAYAKSLCEDIEFSPEDAGRSDPEFLYQVLERAIAAGATTVNIPDTVGYTTPSEFGGLIRGIKENVPNIDQAIISVHGHNDLGLAVANFLEAVKNGARQLECTINGIGERAGNAALEELVMALHVRRQFFNPFFGRPADSEVPITNINTREIYKTSRLVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIMDAQSIGLNDNLIVLGKHSGRHAFQNRLQELGFD-LSDDEINKAFVRFKDVADKKKEVTNWDIEAIVNDEIQQTPELFRLELV--QVSCGNNARPTATVTLRTPE-GQELTDAATGTGPVDAVYKAINRVVNVPN-ELIEFAVQSVTAGIDAIGEVTIRLR--YQGRVFSGHAANTDIIVASAQAYINALNRLQSS 519
[Close]
BLAST of NO04G04810 vs. NCBI_GenBank
Match: OJJ26384.1 (2-isopropylmalate synthase [Roseofilum reptotaenium AO1-A])

HSP 1 Score: 664.5 bits (1713), Expect = 3.500e-187
Identity = 346/530 (65.28%), Postives = 424/530 (80.00%), Query Frame = 0 
Query:  127 RVKIFDTTLRDGEQSPGCTMTAEEKVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGLARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITREMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVGYTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNICTTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYEIMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFKEVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATIGLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAGIDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAVSRGSLPLHPQ 657
            R+ IFDTTLRDGEQ PG T+  +EK+ +A+QL+RLGVD+IEAGFP ASPGDFDAV++IA TVG T   P ICGLARA  +DI+   +AVK AA PRIHTFIATSDIH+Q+KLKKSR +VL+I  EMV YA+S  +DVEFS EDA RSDP FLY++  VA+ AGATT+N+PDTVGYTTP+EF +LIRG++ NV  I    ISVHGH+DLG+AVANF++A+E GARQ+ECTINGIGERAGNAALEE+VMALHVR+ +YNP FGR PES   LT I T +IYKTSRLVS LTGM++QPNKAIVGANAFAHESGIHQDG+LKNK TYEIMDAESIGL++N +VLGKHSGR AF +RL ELG+E L+D +LNKAFVRFKE+ADKKKEI++ D+E+IVNDE++   D    ELV  QV CGD   PTAT+ +   +  EE+  AA GTGPVDA Y A+ + + +   KL+EF+V SVTAGIDA+GEVT+R++      +Y G +ANTD+VVA+ QAY++ALNR++ +     LH Q
Sbjct:    7 RIIIFDTTLRDGEQCPGATLNGDEKLAIAKQLARLGVDVIEAGFPFASPGDFDAVQKIAATVG-TETGPTICGLARATRQDIKAAADAVKPAAKPRIHTFIATSDIHLQYKLKKSREEVLKIAPEMVAYAKSFVDDVEFSPEDAGRSDPEFLYQILEVAIAAGATTVNIPDTVGYTTPAEFGALIRGIKENVPNIDQAIISVHGHNDLGLAVANFLSAVENGARQLECTINGIGERAGNAALEELVMALHVRRQYYNPFFGRAPESTEPLTQIDTKQIYKTSRLVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIMDAESIGLSENQIVLGKHSGRHAFGNRLQELGFE-LSDTDLNKAFVRFKELADKKKEISDWDIEAIVNDEIQQAPDFFRLELV--QVSCGDRAQPTATVTVRTPD-GEELTDAAIGTGPVDAIYKAINRVINVPN-KLIEFSVQSVTAGIDAIGEVTIRIQ--HEDRVYSGHAANTDIVVASAQAYVNALNRLSEALEKDRLHAQ 528
The following BLAST results are available for this feature:
BLAST of NO04G04810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28880.11.000e-27183.792-isopropylmalate synthase [Nannochloropsis gadita... [more]
XP_005715553.19.500e-20967.952-isopropylmalate synthase [Chondrus crispus] >CDF... [more]
OSX76579.12.600e-20667.80hypothetical protein BU14_0184s0006 [Porphyra umbi... [more]
XP_005821098.11.300e-20564.462-isopropylmalate synthase [Guillardia theta CCMP2... [more]
XP_005704188.15.100e-20266.182-isopropylmalate synthase [Galdieria sulphuraria]... [more]
CBN74373.19.300e-18869.402-Isopropylmalate synthase [Ectocarpus siliculosus... [more]
WP_106173200.11.600e-18765.302-isopropylmalate synthase [filamentous cyanobacte... [more]
WP_006618368.12.100e-18766.162-isopropylmalate synthase [Arthrospira platensis]... [more]
KDR56307.12.100e-18766.162-isopropylmalate synthase [Arthrospira platensis ... [more]
OJJ26384.13.500e-18765.282-isopropylmalate synthase [Roseofilum reptotaeniu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009294NSK009294Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04810.1NO04G04810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579683gene_2268Nannochloropsis oceanica (N. oceanica CCMP1779)gene
IPMS2gene1731Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04810.1NO04G04810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04810 ID=NO04G04810|Name=NO04G04810|organism=Nannochloropsis oceanica|type=gene|length=3749bp
ATGCCGTCTTCTAGCTGCAACCCTAAGCCTTCGTCACTCTCCTGCTGTAC
CTCGTCGAGGATAAGACAACGCGTAGTTGTAGCCTCCTCCCTCCTTGCCC
TCGCCGCGGCCGCCACCTCGGTAACGAGCGCCCAGGCCTTTATCTTGCCA
GTAAATCAAACACCTCTACCTCGCTCGACTTCTACCTCTAGGCCCCGTCA
CTCTTCTCCTTTCCTCTGGCGTCACCATGCCGTACGCTCGTCCAAACCTA
CCATCAGAATGATGGCTACCACCGTCAGTAAAACCAGCAGCAGCAGCACT
GCCTCCAACCCTCAAGACGACGACATAGTGAGGCCAATTCCCACCCGCCA
TGATATTGAGACTGGCCGTGACCCCATGCGGGTCAAGATTTTCGATACCA
CCCTTCGAGATGGAGAGCAGAGCCCTGGGTGCACCATGACGGCGGAGGAA
AAAGTACAGgtatatcaagtgtgctgtcacccttcctccctcccttcctc
cacacctcccacttacttttgacgcagacagtgaccaaaatcttgtggga
atcaagaaacatcactcattctgaacaaaccgttttctctcctcagGTGG
CGCGGCAGTTGTCCAGGCTGGGTGTGGACATCATCGAGGCTGGCTTCCCT
ATTGCCAGCCCAGGGGACTTCGATGCCGTGAAACGGATTGCGCAAACCGT
GGGGAATACCGTTAATCCCCCCATCATCTGCGGCTTGGCCAGGGCCTTGC
ACAAGGACATTGAGACGTGCTGGGAGGCTGTGAAACACGCGGCGTTTCCC
CGTATTCATACCTTCATTGCCACGAGTGATATCCACATGCAGCACAAGCT
TAAGAAGAGCCGGGCGCAGgtacggccttctttccatccttcttccctcc
tttctttcttcctttcttttctccttccctcgtttctcgattgtcctctc
taccctccatccttccctcccttcccctcagctctccgcccggccatacc
cccacaaaatccttccctccctccctccctccctccctccctccccccct
ctctctctctctctcccatcctcagGTATTGGAAATTACGCGTGAAATGG
TGACGTATGCCCGATCTCTGTGCGAAGACGTAGAGTTTTCGGCCGAAGAC
GCCCTCAGGTCCGACCCAGCGTTTCTGTATGAAGTGTATTCAGTGGCGGT
GGAGGCGgtaaggaaagggtggagggagggaggtagggagtgagggaaga
agaggaaatggctgatctatggacacttgattctcataattttctcacct
ctctctccctccctctctccctccctccttcctttagGGTGCGACTACTC
TGAATGTTCCGGACACAGTGGGCTACACCACTCCCAGTGAATTTAAGTCC
CTCATCCGGGGCCTCCGCGCCAACGTCAAGGGCATCCAAGGCGTCACCAT
CTCCGTGCATGGgtaagccctccctccctccctccctccctccctccttc
cctcccttccttcttccctccctccctccatccatccctgcctccatccc
tgcctgtcgtgcagtgtagcggtatccctgcctgtcgtgcagtgtagcgg
tattaagaagccatcaggggcgtcgcctcaccatacccctccctccctcc
ctccctccctccctccctccctccctcagACACGACGACCTGGGCATGGC
AGTGGCTAACTTCATGGCGGCCATTGAAGGCGGCGCGCGGCAGGTGGAAT
GCACCATTAACGGCATTGGAGAACGCGCAGGAAACGCGGCATTGGAAGAA
ATCGTCATGGCGCTGCACGTCCGTAAATCCTTCTACAACCCGAGgtaaaa
ctaccttgctctctttccttccctccctccctccctccctccctccctcc
cttagggtcggatgcgaacgcgaagacgacgttgcgtttcacctgcatat
cctttccttctccctccctccctccctccctccctccctccctccttcct
tccttcccttgctcagGTTTGGACGCACGCCCGAGAGTGAGCTCGCTTTG
ACCAACATCTGTACAACTGAGATTTATAAGACGTCCCGCCTGGTCTCTAC
ATTGACGGGCATGgtgcggagggagggagggacggagggagggaggaaaa
ggaggcataggagaaaacatggtatcaccaagtgctgtttctcgtcctct
ccctccatcccacgattgcccagcaccctcatcccccctccattcctcct
tccctccctctcccctccctcagGTCATCCAGCCCAACAAGGCTATCGTC
GGTGCCAACGCCTTTGCCCATGAGAGTGGCATCCACCAGGACGGCATGTT
GAAGAACAAATCCACCTACGAGATTATGGACGCCGAGTCCATCGGCCTGG
CCAAGAACGgtacgcccctcccttcctccctccctccctccctctttcca
ggcctcgctcacggagcgggctcatggctcttgactcacctttccctccc
tccctcccaccctccctccctccctccctccctccctccagGATTGGTCC
TAGGGAAGCACTCCGGACGTGCCGCCTTCCGTTCCCGCCTGACGGAGCTG
GGCTACGAGTCCCTGACAGACGCCGAGTTGAATAAGGCCTTTGTGCGGTT
CAAGGAGGTGGCGGACAAGAAGAAGgtgagggcgggagggagggagggag
gggagggagatgagactcggacatggcaagcccgccaggactcaaattga
caggtccgtcagaacccaccgcatcaaactcttcttccccccctcccacc
ctccctccctccctccctcccctccgtctcccagGAAATCACCAACCTAG
ACTTGGAGTCCATCGTGAATGATGAAATGCGCCTCGAGTTCGACGCGGGA
AATTTCGAGCTTGTGCGCTGCCAGgtatgaatataaaggggggagggagg
aagggaaggagggagggaaggagggagaggttgcataaggcaacctcttc
aaacaccgaatgagccaaaacactcacccatctttccctccctccctccc
tccctccctccctccctccctccctccctccctagGTCATCTGCGGTGAC
AGCCAAGTACCCACGGCCACCATCGGCCTCCTCAACAAGGAAACGAACGA
AGAAATCATCATGGCCGCCACTGGCACCGgtacgtctttgtcctccctcc
ctccttccctccctttccccatcctttgacaagcggcttccttaccagct
gccctccctccccccttcctccctccttccctccccccttcctccttcct
tccctccctcccttcctcccccctaccatagGCCCGGTGGACGCAGCCTA
TGTAGCAGTGACCAAGGCCCTGGGCATCGATAAAATTAAGgtacggaggg
agggagggagggagggaggattgatgagtcttcgaaaaggaaaacaagtc
ttgctgacgcatgcactgacaatctttttccctacccccctccctccctc
cctccttccctccttccctcctccctccagCTCCTGGAGTTCGCCGTCTC
GTCCGTCACAGCAGGAATCGATGCCCTGGGGGAAGTCACCGTTCGTCTGG
AGGACTTGTCAACGGGCATGATTTATTATGGCCGTAGTGCTAACACGGAC
GTGGTAGTGGCGGCCACTCAAGCTTATCTGAGTGCTCTTAACAGAGTGGC
AGTCAGTCGAGGGTCCTTGCCCTTGCACCCGCAGTTTGGAAAGATCTAG
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protein sequence of NO04G04810.1

>NO04G04810.1-protein ID=NO04G04810.1-protein|Name=NO04G04810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=661bp
MPSSSCNPKPSSLSCCTSSRIRQRVVVASSLLALAAAATSVTSAQAFILP
VNQTPLPRSTSTSRPRHSSPFLWRHHAVRSSKPTIRMMATTVSKTSSSST
ASNPQDDDIVRPIPTRHDIETGRDPMRVKIFDTTLRDGEQSPGCTMTAEE
KVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGL
ARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITR
EMVTYARSLCEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVG
YTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGAR
QVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNIC
TTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYE
IMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFK
EVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATI
GLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAG
IDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAVSRGS
LPLHPQFGKI*
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Synonyms
Publications