IPMS2, gene1731 (gene) Nannochloropsis gaditana

Overview
NameIPMS2
Unique Namegene1731
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:183848..192378 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100095g11
Gene biotypeprotein_coding
GeneIPMS2
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:183848..192378 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009058biosynthetic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04810NO04G04810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1802rna1802-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1802rna1802Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1802

>rna1802-protein ID=rna1802-protein|Name=rna1802|organism=Nannochloropsis gaditana|type=polypeptide|length=1417bp
MLKCTKNTSNACQIFIKTRAATRIALDRSLQEQPYLRQGRNCSAAHPSAI
RAIQGERYNQNTMHPSNLQPGLASSMAISSASSHGRRRQRVAVASSLLVL
AAAAVSTSTTQAFILPIPPSAKSSPSFSSSAPRFARPNAVVSGKRVLRMA
TTLTDASSSDVISPAELDVVRPVPTRHDRETGRDPMRVKIFDTTLRDGEQ
SPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGN
MENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKK
SREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGA
TTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVAN
FMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAP
EDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQD
GILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDA
ELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVIC
GDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLL
EFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAGVLFLSTL
SLGRFDLQEDRVVWQDGKECCVRRVVSSFRSSWRHTWITTLYEKAFRDYG
YVKKTRARWKLPMKETIRSHPHVRGKYRDRLSMPSIDEEHAVHTALVPPT
SAEVSIPSAGAASTAHPSSTEAMRSLQELEADDTEYSQTHTHPRPGHDHE
KPPTAGILSFLYAFEGGDPDSEVDVVHAFQEEGGVPERKPPVFSFRTLLS
YTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMA
VRLGVVTGKNLARVCKEQYNRATSMTLWILIELAIVGCDLQEIVGSAIAF
QILFGFPLWLGCLITFIDTFTFLGIHYFGVRKLESVFVLLVAIMTVCFFI
NFGKSPPPSRDIAEGFVPQIRPYAVLSAVGLIGAVIMPHNIYLHSALVLS
RKVDRRRPAHVKEANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCA
TAPGGPLACLSRTEEGVCDCQLIGLAGAHDALAEALGKSAKYIWAVGLLA
AGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTE
NNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTIT
IWVLAFGVLAINIYLVVLRIGAGQPWWVYVVTAVVGLIYLAFSYSLVQED
IENGAWAVVEGLPVGWPLKRRLLAWRERRKVRKEGLIGGDGISNVSPKHQ
RLIESVGDSDGSEPEST
back to top
Synonyms
Publications