NO04G04740, NO04G04740 (gene) Nannochloropsis oceanica

Overview
NameNO04G04740
Unique NameNO04G04740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1214
Alignment locationchr4:1286577..1287790 +

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial carrier protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1286577..1287790 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR002067Mit_carrier
Homology
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: EWM28860.1 (mitochondrial carrier protein [Nannochloropsis gaditana])

HSP 1 Score: 401.0 bits (1029), Expect = 3.900e-108
Identity = 218/306 (71.24%), Postives = 238/306 (77.78%), Query Frame = 0 
Query:   47 VDAHKQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARVCARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVAHKTHFAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGKEGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFDWVKDRL 353
            ++A KQVLAGSIAAFVST+VCHPIDVLRTELQ      TAR C RRI  AEG  GFYKGLSAPLAAQAVYKAIIFGTNSTAQ+ L++  +KR RP SS+ SP      L+YP+IFLCG ++GGVNA+VV+PVEL+RNRLV     ++GPRDC+ QAWR GG RGLW GL PTL RDGPGVGAWFLAFAAGKD LL  KK    LRG G RE     LGV  LLLAGS AGVAFWTVALPFDTVKSVMQV GV     +EGMG V  RLVREGG+ RLFRGW  AFGRAVPGSAATLATFD VKD L
Sbjct:   42 INARKQVLAGSIAAFVSTLVCHPIDVLRTELQTTQETLTARECLRRIWRAEGMQGFYKGLSAPLAAQAVYKAIIFGTNSTAQQLLLARTKKRPRPPSSNLSP----QCLSYPEIFLCGALSGGVNALVVTPVELVRNRLVVSHGVYSGPRDCVGQAWRGGGFRGLWNGLLPTLCRDGPGVGAWFLAFAAGKDGLLAWKKSTKGLRG-GKREAGEEKLGVGGLLLAGSGAGVAFWTVALPFDTVKSVMQVAGVGSEGKREGMGQVIERLVREGGLRRLFRGWQGAFGRAVPGSAATLATFDVVKDWL 342
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: XP_005854798.1 (hypothetical protein NGA_0360510, partial [Nannochloropsis gaditana CCMP526] >EKU21566.1 hypothetical protein NGA_0360510, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 328.6 bits (841), Expect = 2.400e-86
Identity = 178/251 (70.92%), Postives = 196/251 (78.09%), Query Frame = 0 
Query:   47 VDAHKQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARVCARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVAHKTHFAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKG 298
            ++A KQVLAGSIAAFVST+VCHPIDVLRTELQ      TAR C RRI  AEG  GFYKGLSAPLAAQAVYKAIIFGTNSTAQ+ L++  +KR RP SS+ SP      L+YP+IFLCG ++GGVNA+VV+PVEL+RNRLV     ++GPRDC+ QAWR GG RGLW GL PTL RDGPGVGAWFLAFAAGKD LL  KK    LRG G RE     LGV  LLLAGS AGVAFWTVALPFDTVKSVMQV G
Sbjct:   42 INARKQVLAGSIAAFVSTLVCHPIDVLRTELQTTQETLTARECLRRIWRAEGMQGFYKGLSAPLAAQAVYKAIIFGTNSTAQQLLLARTKKRPRPPSSNLSP----PCLSYPEIFLCGALSGGVNALVVTPVELVRNRLVVSHGVYSGPRDCVGQAWRGGGFRGLWNGLLPTLCRDGPGVGAWFLAFAAGKDGLLAWKKSTKGLRG-GKREAGEEKLGVGGLLLAGSGAGVAFWTVALPFDTVKSVMQVAG 287
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: XP_004336065.1 (carrier superfamily protein [Acanthamoeba castellanii str. Neff] >ELR14052.1 carrier superfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 222.2 bits (565), Expect = 2.500e-54
Identity = 135/316 (42.72%), Postives = 179/316 (56.65%), Query Frame = 0 
Query:   51 KQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARV--CARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLV-----------AHKTHFAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGK-EGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFDWVKDRL 353
            K + AGS+A  VS  VC+P+D++RT LQ         V  C  +    EGFL  YKG+S+PLAAQA+ KAI+FG    AQ F++  R +         + S P  L T+ ++ LCG+ AG VN VV +P+EL+RNRL+           A  T + GP DC ++  ++ G+RGLWRG+GPTL RDGPGVGAW+ +F   K  L+           EG    D   LG   LLLAG+A GV +W  A P DT+KSVMQ      + GK   M   A+ L REGGV R +RG+     R VPG+AAT AT+  + D +
Sbjct:   19 KDLFAGSVAGMVSLAVCYPLDIVRTRLQTTDASRFNGVIDCFAKTVKGEGFLALYKGMSSPLAAQALQKAIMFGAYGAAQRFIVGGRDR--------GTTSSPQPLSTF-ELLLCGMFAGSVNTVVAAPIELVRNRLMTQYHAKAASGAADATFYTGPIDCCKKIVQQHGLRGLWRGVGPTLLRDGPGVGAWYASFEFVKRLLI----------PEGKTAKD---LGFSRLLLAGAAGGVGYWVTAFPQDTIKSVMQT----DKAGKYRNMAHCAQELFREGGVPRFYRGFLMGITRGVPGAAATFATYSIIMDAI 308
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: XP_012200680.1 (hypothetical protein SPRG_06473 [Saprolegnia parasitica CBS 223.65] >KDO28617.1 hypothetical protein SPRG_06473 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 184.1 bits (466), Expect = 7.400e-43
Identity = 114/301 (37.87%), Postives = 165/301 (54.82%), Query Frame = 0 
Query:   50 HKQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARVCARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVAHKT----HFAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGKEGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFD 347
            ++ V+AGS++   S VVCHP+D +RT LQ  ++ +   V A  I+  EGF G Y+G   P  +QAVYK++IF T S  ++ L             +++ + PS LL+     + G +AGG+NA +V+PVEL+RNRL    T     ++G  D + +  +  GV  LW+GL  T+ RD  GVG +F+ F   K  L +      R                  +L+AG+  GVAFWT+ALPFDT+K+V+QV         +GM A    LVR  G+GR+F GW AAF R +PG+A T   +D
Sbjct:   10 YEHVVAGSVSGMSSVVVCHPLDTIRTRLQHASSRSFTSVVASTIQH-EGFRGLYRGFFPPFFSQAVYKSVIFTTQSKVRQLL-------------AATIAEPSPLLS---TIVSGGIAGGINATLVAPVELVRNRLQVQGTSASQQYSGTFDVIAKVVKREGVFALWKGLSATITRDALGVGLYFMGFDVAKTHLPSDWHPTTR------------------VLIAGAIGGVAFWTIALPFDTIKTVIQV----NPHNTKGMLATGLDLVRRDGLGRVFYGWQAAFSRGIPGAAITFYAYD 271
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: XP_002899912.1 (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >EEY60539.1 Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4])

HSP 1 Score: 183.0 bits (463), Expect = 1.700e-42
Identity = 119/304 (39.14%), Postives = 158/304 (51.97%), Query Frame = 0 
Query:   51 KQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARV-CARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVAHKTH------FAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGK-EGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFD 347
            K V+AGS++  VS V CHP D +RT LQ+  T       CA++    E   G YKG   P  +Q VYKA+IF T+ST +  ++ H             P L   L         G VAGGVNA +V+PVEL+RNRL     +      + G   C+ Q  R  G+  +W+GL  T+ RD  GV  +FL +   K  L            E G+ G+        LL AG+  G++FW VALPFDT+KS++Q     GR GK  G+ +   RLVRE GV +LFRGW AAF R +P +A T  TF+
Sbjct:   16 KSVVAGSVSGMVSVVACHPFDTIRTRLQLSPTRFRGFFHCAQQTVHQETMRGLYKGFLPPFFSQGVYKAVIFTTSSTLRNDVLPH------------MPLLQPILTPTAVSLTAGAVAGGVNAFLVAPVELVRNRLQVQYDNQPDTRKYRGAYHCVTQVVRSEGITAMWKGLTTTVIRDSLGVAFYFLGYDFAKKRL-----------SESGKLGE-----TATLLTAGAVGGISFWAVALPFDTIKSLIQ---ADGRTGKYTGLVSSTARLVREEGVMQLFRGWQAAFSRGIPSAAITFWTFE 288
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: ETI36772.1 (hypothetical protein F443_17157 [Phytophthora parasitica P1569] >ETK76988.1 hypothetical protein L915_16698 [Phytophthora parasitica] >ETL30417.1 hypothetical protein L916_16606 [Phytophthora parasitica] >ETL83650.1 hypothetical protein L917_16425 [Phytophthora parasitica] >ETM36851.1 hypothetical protein L914_16533 [Phytophthora parasitica] >ETO65492.1 hypothetical protein F444_17200 [Phytophthora parasitica P1976] >ETP06598.1 hypothetical protein F441_17031 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 180.6 bits (457), Expect = 8.200e-42
Identity = 116/303 (38.28%), Postives = 160/303 (52.81%), Query Frame = 0 
Query:   51 KQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARV-CARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVA------HKTHFAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGKEGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFD 347
            K V+AGS++   S V CHP D +RT LQ+  +       CA++    E   G YKG   P  +Q VYKAIIF T+ST +  ++ H         S   P L  ++++       G +AGGVNA +V+PVEL+RNRL            + G   C+ Q  R  G+  +W+GL  T+ RD  GV  +FL +   K  L            E G+ G+     +  LL AG+  GV+FW VALPFDT+KS++Q  G  G+    G+ +   RLVRE GV +LFRGW AAF R +P +A T  TF+
Sbjct:   16 KSVVAGSVSGMASVVACHPFDTIRTRLQLSPSRFRGFFHCAQQTIQQETMRGLYKGFLPPFFSQGVYKAIIFTTSSTLRNDVLPH--------ISLLQPVLTPTVVS----LTAGAIAGGVNAFLVAPVELVRNRLQVQYDSQPETRKYRGAYHCVTQVVRTEGITAMWKGLTTTVIRDSLGVAFYFLGYDFAKKRLT-----------ESGKLGE-----MATLLTAGAFGGVSFWAVALPFDTIKSLIQADGKTGKY--TGLASSTARLVREEGVMQLFRGWQAAFSRGIPSAAITFWTFE 288
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: XP_008912502.1 (hypothetical protein PPTG_16767 [Phytophthora parasitica INRA-310] >ETN02119.1 hypothetical protein PPTG_16767 [Phytophthora parasitica INRA-310])

HSP 1 Score: 180.3 bits (456), Expect = 1.100e-41
Identity = 116/303 (38.28%), Postives = 160/303 (52.81%), Query Frame = 0 
Query:   51 KQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARV-CARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVA------HKTHFAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGKEGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFD 347
            K V+AGS++   S V CHP D +RT LQ+  +       CA++    E   G YKG   P  +Q VYKAIIF T+ST +  ++ H         S   P L  ++++       G +AGGVNA +V+PVEL+RNRL            + G   C+ Q  R  G+  +W+GL  T+ RD  GV  +FL +   K  L            E G+ G+     +  LL AG+  GV+FW VALPFDT+KS++Q  G  G+    G+ +   RLVRE GV +LFRGW AAF R +P +A T  TF+
Sbjct:   16 KSVVAGSVSGMASVVACHPFDTIRTRLQLSPSRFRGFFHCAQQTIQQETMRGLYKGFLPPFFSQGVYKAIIFTTSSTLRNDVLPH--------ISLLQPVLTPTVVS----LTAGAIAGGVNAFLVAPVELVRNRLQVQYDSQPETRKYRGAYHCVTQVVRTEGITAMWKGLTTTVIRDSLGVAFYFLGYDFAKKRL-----------AESGKLGE-----MATLLTAGAFGGVSFWAVALPFDTIKSLIQADGKTGKY--TGLASSTARLVREEGVMQLFRGWQAAFSRGIPSAAITFWTFE 288
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: XP_009828786.1 (hypothetical protein H257_05568 [Aphanomyces astaci] >ETV82049.1 hypothetical protein H257_05568 [Aphanomyces astaci])

HSP 1 Score: 180.3 bits (456), Expect = 1.100e-41
Identity = 109/298 (36.58%), Postives = 160/298 (53.69%), Query Frame = 0 
Query:   53 VLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARVCARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVAHKTH--FAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGKEGMGAV--ARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFD 347
            V+AGS++   S VVCHP+D +RT LQ  ++ + A V    +R  EG  G YKG   P  +QAVYK++IF      + F+ +H            SP L S+          G +AGG+NA +V+PVEL+RNRL   + H  + G  D ++Q     G   LW+GL  T+ RD  GV  +F+AF   K  L +     +R                  +L+AG+  G+AFW++ALPFDT+K+V+QV        ++ +G +    +LVR+ G+GR+F GW AAF R +PG+A T   +D
Sbjct:   17 VVAGSVSGMSSVVVCHPLDTIRTRLQYSSSSSFASVVCTTLRH-EGLRGLYKGFFPPFFSQAVYKSVIFSAQGHVRSFMSAH--------MDHPSPLLLST--------CAGAIAGGINAFLVAPVELVRNRLQIQQQHAKYKGTADVVRQVIMHEGPLALWKGLSCTITRDALGVACYFMAFDCVKSALPSEWDTTSR------------------VLVAGATGGIAFWSIALPFDTIKTVIQVSTPSTSHQEQPLGMIRTGLQLVRQHGIGRVFHGWQAAFSRGIPGAAITFWAYD 279
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: XP_008868165.1 (hypothetical protein H310_05272 [Aphanomyces invadans] >ETW02781.1 hypothetical protein H310_05272 [Aphanomyces invadans])

HSP 1 Score: 179.9 bits (455), Expect = 1.400e-41
Identity = 112/294 (38.10%), Postives = 158/294 (53.74%), Query Frame = 0 
Query:   53 VLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARVCARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVAHK-----THFAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGKEGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAAT 342
            V+AGSI+   S +VCHP+D +RT LQ  ++ + + V    +R  EG  G YKG   P  +QAVYK++IF     A+ F+ +H     RPS        P  L T       G +AGG+NA +V+PVEL+RNRL   +       + G  D ++Q  +  G   LW+GL  T+ RD  GV  +F+ F   K  L +     +R                  +L+AG++ G+AFWT+ALPFDTVK+V+QV   +      GM      LVR+ GVGR+F+GW AAF R +PG+A T
Sbjct:   16 VIAGSISGMSSVIVCHPLDTIRTRLQHSSSSSFSTVVGTTLRH-EGLRGLYKGFFPPFFSQAVYKSVIFSVQGRARSFMSTHMD---RPS--------PLFLST-----CAGAIAGGINAFLVAPVELVRNRLQIQQQDTANAKYKGSIDVIRQVTKHEGPMALWKGLSCTITRDALGVAFYFVTFDCIKTVLPDDWAPASR------------------VLVAGASGGIAFWTIALPFDTVKTVIQVSAHEAGTQPHGMIRTGLHLVRQHGVGRVFQGWQAAFSRGIPGAAIT 274
[Close]
BLAST of NO04G04740 vs. NCBI_GenBank
Match: ETP34684.1 (hypothetical protein F442_17032 [Phytophthora parasitica P10297])

HSP 1 Score: 179.1 bits (453), Expect = 2.400e-41
Identity = 115/303 (37.95%), Postives = 160/303 (52.81%), Query Frame = 0 
Query:   51 KQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARV-CARRIRDAEGFLGFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSLPSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVA------HKTHFAGPRDCLQQAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARLRGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKGRVGKEGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFD 347
            K V+AGS++   S V CHP D +RT LQ+  +       CA++    E   G YKG   P  +Q VYKAIIF T+ST +  ++ H         S   P L  ++++       G +AGGVNA +V+PVEL+RNRL            + G   C+ Q  R  G+  +W+GL  T+ RD  GV  +FL +   K  L            + G+ G+     +  LL AG+  GV+FW VALPFDT+KS++Q  G  G+    G+ +   RLVRE GV +LFRGW AAF R +P +A T  TF+
Sbjct:   16 KSVVAGSVSGMASVVACHPFDTIRTRLQLSPSRFRGFFHCAQQTIQQETMRGLYKGFLPPFFSQGVYKAIIFTTSSTLRNDVLPH--------ISLLQPVLTPTVVS----LTAGAIAGGVNAFLVAPVELVRNRLQVQYDSQPETRKYRGAYHCVTQVVRTEGITAMWKGLTTTVIRDSLGVAFYFLGYDFAKKRLT-----------KSGKLGE-----MATLLTAGAFGGVSFWAVALPFDTIKSLIQADGKTGKY--TGLASSTARLVREEGVMQLFRGWQAAFSRGIPSAAITFWTFE 288
The following BLAST results are available for this feature:
BLAST of NO04G04740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
100200300400500600700800900100011001200Expect = 3.90e-108 / Id = 71.24Expect = 2.40e-86 / Id = 70.92Expect = 2.50e-54 / Id = 42.72Expect = 7.40e-43 / Id = 37.87Expect = 1.70e-42 / Id = 39.14Expect = 8.20e-42 / Id = 38.28Expect = 1.10e-41 / Id = 38.28Expect = 1.10e-41 / Id = 36.58Expect = 1.40e-41 / Id = 38.10Expect = 2.40e-41 / Id = 37.95SequenceEWM28860.1XP_005854798.1XP_004336065.1XP_012200680.1XP_002899912.1ETI36772.1XP_008912502.1XP_009828786.1XP_008868165.1ETP34684.1
Match NameE-valueIdentityDescription
EWM28860.13.900e-10871.24mitochondrial carrier protein [Nannochloropsis gad... [more]
XP_005854798.12.400e-8670.92hypothetical protein NGA_0360510, partial [Nannoch... [more]
XP_004336065.12.500e-5442.72carrier superfamily protein [Acanthamoeba castella... [more]
XP_012200680.17.400e-4337.87hypothetical protein SPRG_06473 [Saprolegnia paras... [more]
XP_002899912.11.700e-4239.14Mitochondrial Carrier (MC) Family [Phytophthora in... [more]
ETI36772.18.200e-4238.28hypothetical protein F443_17157 [Phytophthora para... [more]
XP_008912502.11.100e-4138.28hypothetical protein PPTG_16767 [Phytophthora para... [more]
XP_009828786.11.100e-4136.58hypothetical protein H257_05568 [Aphanomyces astac... [more]
XP_008868165.11.400e-4138.10hypothetical protein H310_05272 [Aphanomyces invad... [more]
ETP34684.12.400e-4137.95hypothetical protein F442_17032 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009305NSK009305Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04740.1NO04G04740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628378gene_2261Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100133g4gene1742Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04740.1NO04G04740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04740 ID=NO04G04740|Name=NO04G04740|organism=Nannochloropsis oceanica|type=gene|length=1214bp
ATGCCAGGAAGCAGCAGCAGTGGCTTGATGGGGCATGTCTCGTCGCCGCG
ACCGTCCCCTTCGTCCCACTTCTCCTCCCAGCCTCCCCCCTCTACAACGG
CCAGCGGCAGCACCACCGACACCACTACTGCCAACGTCGTTGACGCCCAC
AAGCAAGTTCTTGCCGGTTCCATTGCTGCCTTTGTCTCCACCGTCGTCTG
TCACCCCATCGATGTCCTACGCACCGAGCTGCAGATTCGGACGACTGGTA
CCACGGCCCGGGTCTGTGCCCGTCGCATTCGCGATGCCGAAGGCTTTTTA
GGGTTCTACAAGGGGTTAAGTGCCCCATTGGCAGCGCAGGCAGTGTACAA
AGCgtaagttttcctccgtatacttatggtatcttcttgttattcctctg
tccctccatcccgttcaaactaaatgcctcttttacctctttcctcccgt
cacatctccgtccttccctctcatccttccttgtactcgctctcacctcc
tcacatagTATCATCTTCGGCACCAATTCAACCGCCCAAGAATTCCTCAT
CTCCCATCGTCGCAAGCGATTCCGCCCTTCCTCCTCCTCCTCCTCTCCCT
CCCTCCCTTCTTCCCTCCTCACCTACCCCGACATATTCCTCTGTGGTGTC
GTGGCCGGAGGAGTCAATGCCGTCGTCGTATCACCCGTCGAATTGATTCG
AAATCGTTTGGTGGCCCATAAAACGCATTTTGCCGGGCCTCGCGATTGCT
TGCAGCAGGCGTGGAGGGAGGGAGGGGTGAGGGGGTTGTGGAGGGGCTTA
GGGCCAACGTTATGGAGGGACGGACCAGGGGTAGGGGCATGGTTTCTGGC
GTTTGCTGCCGGAAAAGATTGGCTGTTGAACACAAAGAAGGAGAGGGCTC
GACTTCGGGGGGAGGGAGGGAGGGAGGGCGATGTGGTGGGATTGGGGGTT
GTGGAGCTCCTGCTGGCGGGATCGGCGGCGGGGGTGGCGTTTTGGACAGT
GGCCTTGCCGTTTGACACGGTGAAGAGCGTGATGCAGGTTAAGGGGGTGA
AAGGGAGGGTTGGAAAGGAGGGGATGGGGGCAGTGGCACGTAGGCTGGTG
AGGGAGGGAGGGGTGGGGAGGTTGTTTCGAGGGTGGCCGGCGGCGTTTGG
ACGGGCGGTGCCGGGCTCAGCGGCGACGCTAGCGACATTTGATTGGGTGA
AGGACAGGTTGTGA
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protein sequence of NO04G04740.1

>NO04G04740.1-protein ID=NO04G04740.1-protein|Name=NO04G04740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MPGSSSSGLMGHVSSPRPSPSSHFSSQPPPSTTASGSTTDTTTANVVDAH
KQVLAGSIAAFVSTVVCHPIDVLRTELQIRTTGTTARVCARRIRDAEGFL
GFYKGLSAPLAAQAVYKAIIFGTNSTAQEFLISHRRKRFRPSSSSSSPSL
PSSLLTYPDIFLCGVVAGGVNAVVVSPVELIRNRLVAHKTHFAGPRDCLQ
QAWREGGVRGLWRGLGPTLWRDGPGVGAWFLAFAAGKDWLLNTKKERARL
RGEGGREGDVVGLGVVELLLAGSAAGVAFWTVALPFDTVKSVMQVKGVKG
RVGKEGMGAVARRLVREGGVGRLFRGWPAAFGRAVPGSAATLATFDWVKD
RL*
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Synonyms
Publications