NO04G04690, NO04G04690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04690 vs. NCBI_GenBank
Match: PSC69495.1 (Altered inheritance rate of mitochondria 25 [Micractinium conductrix]) HSP 1 Score: 69.3 bits (168), Expect = 4.100e-8 Identity = 54/168 (32.14%), Postives = 78/168 (46.43%), Query Frame = 0 Query: 188 GAGGSLN-AWMLGTPGASNVLIELSSPYAKGSIKAYLKGEGGRKGGSGEQLPSNGSYCSASTARELAQAAYTRAVTXXXXXXXXXXXXXXXIEVLRKGKFVGVACTAAVVSRETKRGAHRAHVATHTLDEDGKIVSKSYYLALTKGARTRTEEDAEVSKGTLAALLEA 355 G G S + AW+L PGAS ++++ PY + S+ A L G + Y SA TAR++A AAY AV VG+ CT A+ + KRG H+A + T+T + +S+ L L KG R+R ED VSK + A+ E+ Sbjct: 8 GGGASQSMAWLLSVPGASRTVLDIRVPYNRASL-ADLLGH------------APAVYASAETARDMAVAAYRNAVKYSSMGT----------------DIVGIGCTCALATDREKRGEHKAFITTYT-----GVKERSFSLQLAKGVRSRFAEDTLVSKLLIKAVAES 141
BLAST of NO04G04690 vs. NCBI_GenBank
Match: XP_008618985.1 (hypothetical protein SDRG_14620 [Saprolegnia diclina VS20] >EQC27565.1 hypothetical protein SDRG_14620 [Saprolegnia diclina VS20]) HSP 1 Score: 67.8 bits (164), Expect = 1.200e-7 Identity = 55/173 (31.79%), Postives = 83/173 (47.98%), Query Frame = 0 Query: 184 ICTSGAGGSLNAWMLGTPGASNVLIELSSPYAKGSIKAYLKGEGGRKGGSGEQLPSNGSYCSASTARELAQAAYTRAVTXXXXXXXXXXXXXXXIEVLRKGKFVGVACTAAVVSRETKRGAHRAHVATHTLDEDGKIVSKSYYLALTKGARTRTEEDAEVSKGTLAALLEATH 357 + SG GGS +LGT GAS+ L+E+ PY + S+ +L+ G QL + G + S A + + A R + + +G+ CTAA+VS E +RG+HRA ++ HT+D + L + KGARTR EED V + AL +A + Sbjct: 24 VSVSGGGGSAVGEILGTCGASSTLLEVLVPYHRESMADFLQ-------VPGTQLETLG-FSSKDVATLMGKKALERG--------------RRLVPLDDAAACIGIGCTAALVSSEPRRGSHRAFLSLHTVD-----AIHHFKLEMEKGARTRKEEDECVGHLVVLALAKAAN 169
BLAST of NO04G04690 vs. NCBI_GenBank
Match: OQR94267.1 (hypothetical protein ACHHYP_01580 [Achlya hypogyna]) HSP 1 Score: 67.0 bits (162), Expect = 2.000e-7 Identity = 50/171 (29.24%), Postives = 81/171 (47.37%), Query Frame = 0 Query: 184 ICTSGAGGSLNAWMLGTPGASNVLIELSSPYAKGSIKAYLKGEGGRKGGSGEQLPSNGSYCSASTARELAQAAYTRAVTXXXXXXXXXXXXXXXIEVLRKGKFVGVACTAAVVSRETKRGAHRAHVATHTLDEDGKIVSKSYYLALTKGARTRTEEDAEVSKGTLAALLEA 355 + SG GGS +LGT GAS+ L+E+ PY + S+ YL +P+ +++++A+ RA+ + + +G+ C AA+VS E +RG+HRA ++ HT D ++ L + KGAR+R EED V + AL +A Sbjct: 24 VSLSGGGGSAVGEILGTAGASSTLLEVLVPYHRQSMVDYL------------HVPAPELEAMGFSSKDVAELMGKRAL----------EHGRRLVPLAEAASCIGIGCAAAIVSAEPRRGSHRAFLSLHTADS-----VHNFKLEMEKGARSRKEEDECVGHLIVLALAKA 167
BLAST of NO04G04690 vs. NCBI_GenBank
Match: XP_012205932.1 (hypothetical protein SPRG_21032 [Saprolegnia parasitica CBS 223.65] >KDO23366.1 hypothetical protein SPRG_21032 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 66.2 bits (160), Expect = 3.500e-7 Identity = 53/173 (30.64%), Postives = 81/173 (46.82%), Query Frame = 0 Query: 184 ICTSGAGGSLNAWMLGTPGASNVLIELSSPYAKGSIKAYLKGEGGRKGGSGEQLPSNGSYCSASTARELAQAAYTRAVTXXXXXXXXXXXXXXXIEVLRKGKFVGVACTAAVVSRETKRGAHRAHVATHTLDEDGKIVSKSYYLALTKGARTRTEEDAEVSKGTLAALLEATH 357 + SG GGS +LGT GAS+ L+E+ PY + S+ +L+ G G + S + A + + A R + + +G+ CTAA+VS E +RG+HRA ++ HT+D + L + KGARTR EED V + AL +A + Sbjct: 24 VSVSGGGGSAVGEILGTCGASSTLLEVLVPYHRESMADFLQVPGAELEAFG--------FSSKNVATLMGKKALERG--------------RRLVPLDDAAGCIGIGCTAALVSSEPRRGSHRAFLSLHTVD-----AVHHFKLEMEKGARTRKEEDECVGHLVVLALAKAAN 169
BLAST of NO04G04690 vs. NCBI_GenBank
Match: OQS06754.1 (hypothetical protein THRCLA_01219 [Thraustotheca clavata]) HSP 1 Score: 66.2 bits (160), Expect = 3.500e-7 Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 0 Query: 184 ICTSGAGGSLNAWMLGTPGASNVLIELSSPYAKGSIKAYLKGEGGRKGGSGEQLPSNGSYCSASTARELAQAAYTRAVTXXXXXXXXXXXXXXXIEVLRKGKFVGVACTAAVVSRETKRGAHRAHVATHTLDEDGKIVSKSYYLALTKGARTRTEEDAEVSKGTLAALLEATH 357 + +G GGS +LGT GAS+ L+E+ PY + S+ +LK +L + G + S S A + + A A + + + VG+ CTAA+VS E +RG+HRA ++ HT + ++ L L KGARTR EED V + A+ +A + Sbjct: 22 VSLTGGGGSAIGEVLGTSGASSTLLEVIVPYHRQSMIDFLK-------VPPSELETMG-FSSQSVANLMGKKALEHA--------------RRLVSIDQAATCVGIGCTAALVSSEPRRGSHRAFLSVHTAN-----AIHNFKLELEKGARTRKEEDECVGYLIVLAMAKAAN 167
BLAST of NO04G04690 vs. NCBI_GenBank
Match: XP_020106019.1 (uncharacterized protein LOC109722380 [Ananas comosus]) HSP 1 Score: 65.1 bits (157), Expect = 7.800e-7 Identity = 53/169 (31.36%), Postives = 81/169 (47.93%), Query Frame = 0 Query: 189 AGGSLNA--WMLGTPGASNVLIELSSPYAKGSIKAYLKGEGGRKGGSGEQLPSNGSYCSASTARELAQAAYTRAVTXXXXXXXXXXXXXXXIEVLRKG-KFVGVACTAAVVSRETKRGAHRAHVATHTLDEDGKIVSKSYYLALTKGARTRTEEDAEVSKGTLAALLEA 355 AGG+ A W++ PGASN ++E+ PY+K S+ +L ++P+ + S TA E+A AY RA +++ R G +GV T ++ S KRG HR +++T T D ++ + L KG RTR EED S L A+ +A Sbjct: 24 AGGASQALGWLMSVPGASNTILEVVVPYSKISMAQFL-----------SKIPT--QFTSQQTAEEMALVAYNRA-----------------LKLSRPGLPVLGVGFTGSLASTHPKRGDHRFYLSTRTYDS-----LRTSNVTLLKGLRTREEEDKVSSHFLLKAIADA 157
BLAST of NO04G04690 vs. NCBI_GenBank
Match: XP_005652044.1 (hypothetical protein COCSUDRAFT_32019 [Coccomyxa subellipsoidea C-169] >EIE27500.1 hypothetical protein COCSUDRAFT_32019 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 65.1 bits (157), Expect = 7.800e-7 Identity = 49/165 (29.70%), Postives = 76/165 (46.06%), Query Frame = 0 Query: 187 SGAGGSLNAWMLGTPGASNVLIELSSPYAKGSIKAYLKGEGGRKGGSGEQLPSNGSYCSASTARELAQAAYTRAVTXXXXXXXXXXXXXXXIEVLRKGKFVGVACTAAVVSRETKRGAHRAHVATHTLDEDGKIVSKSYYLALTKGARTRTEEDAEVSKGTLAAL 352 +G G + W+L PGAS ++E PY G A + + + +Y TA ++A+AAY +A +GV+CT A+ + K+G H+ +VA H DG + S++ + L+KGAR+R EEDA S+ L AL Sbjct: 27 AGGGAQVMTWLLSVPGASKTVLEARIPYGGGKSMAEILAKEPQ------------TYACTLTAVDMARAAYRQAAHLSEFGV----------------PILGVSCTCALATDRVKKGDHKVYVAVH----DG-VSSRACRVHLSKGARSRLEEDAVASRLVLRAL 158 The following BLAST results are available for this feature:
BLAST of NO04G04690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04690 ID=NO04G04690|Name=NO04G04690|organism=Nannochloropsis oceanica|type=gene|length=2621bpback to top protein sequence of NO04G04690.1 >NO04G04690.1-protein ID=NO04G04690.1-protein|Name=NO04G04690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=545bpback to top Synonyms
Publications
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