NO04G04360, NO04G04360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04360 vs. NCBI_GenBank
Match: EWM28817.1 (exosome component 10 [Nannochloropsis gaditana]) HSP 1 Score: 375.9 bits (964), Expect = 3.500e-100 Identity = 313/691 (45.30%), Postives = 379/691 (54.85%), Query Frame = 0 Query: 1 MRSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRRELGREGGRVRGVWDGSREVCLLRYRKEKFDPEGYLKLMVG--------GMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTECGGAGGSLPMLVTKRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSSTSVFDLHLRRQ---EPKDASLPXXXXXXXXXXXPTEELYLTAGWTSPL--------IPSSLDTMPSLAVPPTV----ISTTANTTAIID-------PSRQGGRGGGMA-VVPAQGNAGMETYRSFSHSLELSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDSTHLQYAAGVDPLAAARVLLRKEQGLPAINDATVEFDXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMADIYKISNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPFDPELEGYFGGSAVVTGVMAPSFTSHGGNSAAVLANKKTRKHDAEDTLKFMSSIGWVNPAA 661 +RSFQGLVCLMQ+STR+RDFL+DTL +RR +GPLL DLFTDHTV+K+FHGA+SDIKWLQRDFGLYVVNLFDTF+AAQAL P KSLAYLL HY GV DKQYQLADWR+RPLPE M YAREDTHYLL++ +CLRR+LGRE GR++ V +GS+ V LLRYRKE FDPEGY +L+ G G GG +GG + + L+ L++WRD VAREEDES GYVC D+LL R+AK+RP T GG+ EC G+G +LP LV R E +S+ D +R+ ++ P + +PL + S++ P+L +PP + + +A T D S GR G A VV A GN G+E++R HS+ LS E D+ YA +DPLA AR LLRKEQGLP +N+A V+F XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX P DPEL YFG + + +P SH G +VL NK+TR D E+ +KFMSSIGWV+ A Sbjct: 314 LRSFQGLVCLMQISTRERDFLVDTL--ALRREVGPLLHDLFTDHTVLKIFHGAESDIKWLQRDFGLYVVNLFDTFVAAQALHMPKKSLAYLLQHYVGVVLDKQYQLADWRVRPLPEKMLHYAREDTHYLLHLHDCLRRDLGREQGRIQEVLEGSQAVSLLRYRKETFDPEGYGRLLQGPRRWTGERGEGGREGGLAPVQRETLKALYDWRDRVAREEDESPGYVCPDKLLLRLAKVRPLTRGGVQECVGSGSALPPLVGARMEDMLQVVGAAGKKEGEEEDKARVFSAGG-------------GESSLGDGGTQRRVNTRTSESKATATTVHADAEKTPLSDYAFPVYVPAPLEDSLSQERVSSTIHPPPTLPLPPVLNTEELYLSAGWTVASDGLQSMTPVSTGAGREGVRAGVVAATGNEGLESHRGLQHSIGLS------------------------VRVRSSNVEEASAPTLQAGVEEREGGREGGGKCTEGDAQG-PYATALDPLAGARALLRKEQGLPPVNNAEVDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVEGPARLGTTRSSSPTPGDTSLSL----PLDPELHEYFGDA--LDNAPSPVPLSHEG--VSVLTNKRTRPEDTEEIVKFMSSIGWVDANA 956
BLAST of NO04G04360 vs. NCBI_GenBank
Match: XP_002590508.1 (hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae] >EEN46519.1 hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]) HSP 1 Score: 235.0 bits (598), Expect = 9.700e-58 Identity = 120/242 (49.59%), Postives = 158/242 (65.29%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRREL----GREGGRVRGVWDGSREVCLLRYRKEKFDPEGYLKLMVGGMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTEC 240 RSFQG CLMQ+STR D+++DTL + RA +L D FTD VVKVFHGAD DI+WLQRDFG+YVVN+FDT A+ LG P SLAYLL Y V+ DK+YQLADWRIRPLP M +YAREDTHYLL+I++C+R EL E + + SR+VCL RY+K + + YL L + K ++ + ++ WRD +AR+EDES+GYV + +L +A+ P+ G+ C Sbjct: 305 RSFQGFTCLMQVSTRDHDYIVDTLAL---RADLHVLNDTFTDPKVVKVFHGADMDIQWLQRDFGVYVVNMFDTGQASHVLGLPRHSLAYLLKTYCDVEPDKKYQLADWRIRPLPSEMTQYAREDTHYLLHIYDCMRSELLDRGNNEANLLHNTLERSRQVCLQRYQKLLYTEDSYLNL----LNKHKKTFNSQQLHAVRLVYRWRDTIARQEDESTGYVLPNHMLLVLAETLPKQIQGVFAC 539
BLAST of NO04G04360 vs. NCBI_GenBank
Match: XP_015928084.1 (exosome component 10-like [Parasteatoda tepidariorum]) HSP 1 Score: 234.6 bits (597), Expect = 1.300e-57 Identity = 115/245 (46.94%), Postives = 166/245 (67.76%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRRELGREGGRVRGV----WDGSREVCLLRYRKEKFDPEGYLKLMVGGMGGWKGGRE---GPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTEC 240 RSFQG CLMQ+S+R +D+++D L + R+ P+L D+FTD +VKV HGAD DI WLQRDFG+YVVN+FDT AA+ L F SL+YLL HY + DK++QLADWRIRPLPE M +YAREDTHYLLY+++CL+ +L +G ++ + ++ S+ +CL +Y+K F + +++L +K R+ G ++ CL+ ++ WRD +ARE DES YV + +L +IA+ PR G+ C Sbjct: 273 RSFQGFTCLMQISSRSKDYIVDVLAL---RSQLPVLNDIFTDPKIVKVLHGADMDILWLQRDFGVYVVNMFDTGQAARVLHFAHLSLSYLLKHYCKLDVDKKFQLADWRIRPLPEEMIKYAREDTHYLLYVYDCLKNDLINQGNEMKNLLHSTFERSKSICLKKYQKPLFSDDKFMEL-------YKKSRKMFNGKQLYCLKEIYSWRDRMAREYDESLLYVLPNHMLLQIAEALPREQQGILAC 507
BLAST of NO04G04360 vs. NCBI_GenBank
Match: XP_007895971.1 (PREDICTED: exosome component 10 [Callorhinchus milii]) HSP 1 Score: 233.4 bits (594), Expect = 2.800e-57 Identity = 116/242 (47.93%), Postives = 162/242 (66.94%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRRELGREGGR----VRGVWDGSREVCLLRYRKEKFDPEGYLKLMVGGMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTEC 240 RSF GL CL+Q+STR+ DF++DTL++ R+ +L ++FTD +VKVFHGADSDI+WLQRDFG+YVVN+FDT AA+ L SL +LL HY V+ADK+YQLADWR+RPLP+ M YA+EDTHYLLY+++ ++ +L +G + VW S++VCL +Y K F E YL+L K +M L+ WRD +AR+EDES+GYV + ++ +IA+ P+ G+ C Sbjct: 321 RSFLGLTCLLQISTREEDFIVDTLEL---RSELYILNEVFTDPAIVKVFHGADSDIEWLQRDFGIYVVNMFDTHQAARTLNLARHSLDHLLRHYCSVEADKRYQLADWRMRPLPKEMLHYAQEDTHYLLYVYDTMKNQLWEQGNEQARLIHLVWHKSKDVCLKKYCKPIFTEESYLEL----NRKQKKHLNTQQMTAFRLLYSWRDKMARQEDESTGYVLPNHMMLKIAEELPKEPQGILSC 555
BLAST of NO04G04360 vs. NCBI_GenBank
Match: KZS08544.1 (Exosome component 10 [Daphnia magna]) HSP 1 Score: 233.4 bits (594), Expect = 2.800e-57 Identity = 121/241 (50.21%), Postives = 161/241 (66.80%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRRELGREG---GRVRGVWDGSREVCLLRYRKEKFDPEGYLKLMVGGMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTEC 240 RSFQG+ CLMQ+ST KRD+++DTL E+ + P L ++F + +VK+FHGAD DI+WLQRDFG+YVVNLFDT+ AA+ LGF SLA++L HY V ADKQYQLADWRIRPLPE M YAREDTHYL YI+ ++++L +G + VW SR VCL RYR E +L+L K ++ L+ L+ WRD +AREEDES+G+V ++ +IA + P+ G+ C Sbjct: 265 RSFQGITCLMQISTNKRDYIVDTL--ELWDHLQP-LNEVFCNPKIVKIFHGADMDIQWLQRDFGIYVVNLFDTYHAAKLLGFAQLSLAFILRHYCQVVADKQYQLADWRIRPLPEQMVNYAREDTHYLGYIYEKMKKDLKMKGTGDNLLSAVWQNSRLVCLKRYRIPPITAESHLELYRLS----KKIFNERQLYALKELFVWRDRIAREEDESTGFVLPKHMMLQIADVLPKEMQGILAC 498
BLAST of NO04G04360 vs. NCBI_GenBank
Match: XP_019637240.1 (PREDICTED: exosome component 10-like [Branchiostoma belcheri]) HSP 1 Score: 233.4 bits (594), Expect = 2.800e-57 Identity = 119/242 (49.17%), Postives = 159/242 (65.70%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRREL----GREGGRVRGVWDGSREVCLLRYRKEKFDPEGYLKLMVGGMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTEC 240 RSFQG CLMQ+STR +D+++DTL + RA +L D FTD +VKVFHGAD DI+WLQRDFG+YVVN+FDT A+ LG P SLAYLL Y V+ DK+YQLADWRIRP+P M +YAREDTHYLL+I++C+R EL E + + SR+VCL RY+K + + YL L + K ++ + L+ WRD VAR+EDES+GY+ + +L +A+ P+ G+ C Sbjct: 322 RSFQGFTCLMQVSTRDQDYIVDTLTL---RADLHILNDTFTDPKIVKVFHGADMDIQWLQRDFGVYVVNMFDTGQASHVLGLPRHSLAYLLKTYCDVEPDKKYQLADWRIRPIPSEMIQYAREDTHYLLHIYDCMRSELLDRGNNEANLLHNTLERSRQVCLQRYQKLLYTEDSYLNL----LQKHKKTFNSQQLHAVRLLYRWRDTVARQEDESTGYILPNHMLLVLAEALPKQTQGVFAC 556
BLAST of NO04G04360 vs. NCBI_GenBank
Match: XP_009860766.1 (PREDICTED: exosome component 10-like [Ciona intestinalis]) HSP 1 Score: 232.6 bits (592), Expect = 4.800e-57 Identity = 121/242 (50.00%), Postives = 166/242 (68.60%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRRELGREG--GRVRGVWDGSREVCLLRYRKEKFDPEGYLKLMV--GGMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTEC 240 RS+QG+ CLMQLSTR +D+++DT+ + RA +L +F + ++KVFHGADSDI WLQRDFG+YVVNLFDT AA+ALG SL YLL HY V+ADK+YQLADWRIRPLP+ M YA+ DTHYLLY+++ +R +L + G G + V D SR++C L+Y K + +L L+ GG K R +++ L ++ WRDG+AR+EDES GYV + +L +IA++ PR G+ C Sbjct: 145 RSYQGITCLMQLSTRTKDYIVDTIAL---RAELNILNQVFANPNIIKVFHGADSDIIWLQRDFGIYVVNLFDTGQAARALGLQRHSLDYLLTHYCNVQADKKYQLADWRIRPLPKEMLLYAQGDTHYLLYVYDMMRLDLVKTGDPGLLHKVIDKSRDICCLKYEKPITNDTSHLVLLEKHKRRGGKKDFRP-QQIEALRLIFAWRDGLARQEDESCGYVLPNHMLLQIAEILPREAQGVLAC 382
BLAST of NO04G04360 vs. NCBI_GenBank
Match: CAG07559.1 (unnamed protein product, partial [Tetraodon nigroviridis]) HSP 1 Score: 232.6 bits (592), Expect = 4.800e-57 Identity = 119/242 (49.17%), Postives = 161/242 (66.53%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRREL----GREGGRVRGVWDGSREVCLLRYRKEKFDPEGYLKLMVGGMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTEC 240 RSF G+ CLMQ+STR+ DF+IDTL++ R+ +L + FTD +VKVFHGADSDI+WLQRDFGLYVV LFDT A++AL SL +LL H+ V +DK+YQLADWRIRPLPE M +YAR DTHYLLYI++C+R +L + G ++ VWD SR++ L +Y K F E YL+L K ++ L+ WRD +AR+EDES+GYV ++ +I++ P+ G+ C Sbjct: 287 RSFLGITCLMQISTREEDFIIDTLEL---RSEMYILNEAFTDPAIVKVFHGADSDIEWLQRDFGLYVVRLFDTHQASRALNLARHSLDHLLTHFCNVASDKRYQLADWRIRPLPEEMVQYARADTHYLLYIYDCVRAQLLDFNHGQPGLLKSVWDRSRDISLKKYMKPIFTEESYLEL----QRKQKKSFNTQQLAAFRLLFAWRDKLARQEDESTGYVLPTHMMIKISEELPKEPQGIIAC 521
BLAST of NO04G04360 vs. NCBI_GenBank
Match: XP_004340678.1 (3'5' exonuclease domain containing protein [Acanthamoeba castellanii str. Neff] >ELR18636.1 3'5' exonuclease domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 232.3 bits (591), Expect = 6.300e-57 Identity = 129/258 (50.00%), Postives = 164/258 (63.57%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRREL-GR---EGGRVRGVWDGSREVCLLRYRKEKFDPEGYLKLMVGGMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTECGGAGGSLPMLVTKRAE 256 R+FQG CLMQ+STR DF++DTL + R LL F D +VKVFHG+DSDI WLQRDFGLYV+N+FDT A + L +PS SLAYLL H+ GV ADK+YQLADWRIRPLPE M +YAREDTHYLL+I++ LR EL GR + V + SRE+CLL+Y K + P +L L + +M+ +++WRD VAREEDES YV + +L IA++ P + L C +P LV AE Sbjct: 290 RTFQGFTCLMQISTRTEDFIVDTLAL---REHMHLLSSSFHDANIVKVFHGSDSDIMWLQRDFGLYVINMFDTGQACRVLEYPSFSLAYLLRHHCGVLADKKYQLADWRIRPLPEEMLKYAREDTHYLLFIYDKLRNELIGRANMSNNLILAVLNRSRELCLLQYEKPLWTPTSHLSL----YNRFNYVFNEQQMRVFAAVYKWRDTVAREEDESYRYVLPNHMLFHIAELVPTSVPALLAC---CNPVPPLVRINAE 537
BLAST of NO04G04360 vs. NCBI_GenBank
Match: XP_008936225.1 (PREDICTED: exosome component 10, partial [Merops nubicus]) HSP 1 Score: 232.3 bits (591), Expect = 6.300e-57 Identity = 122/242 (50.41%), Postives = 158/242 (65.29%), Query Frame = 0 Query: 2 RSFQGLVCLMQLSTRKRDFLIDTLQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDTFLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYAREDTHYLLYIFNCLRRELGREGG----RVRGVWDGSREVCLLRYRKEKFDPEGYLKLMVGGMGGWKGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCRIAKMRPRTFGGLTEC 240 RSF GL CLMQ+STR DF+IDTL + R+ +L + FTD +VKV HGADSD++WLQ+DFGLY+VN+FDT AA+ L SL +LL Y V ADKQYQLADWRIRPLPE M RYAREDTHYLLYI++ +R EL G +++ VW SR++CL +Y K F E YL+L K ++ L+ WRD +AR+EDES+GYV + +L +IA+ P+ G+ C Sbjct: 282 RSFLGLTCLMQISTRTEDFIIDTLAL---RSDMSMLNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGRHSLDHLLKLYCSVDADKQYQLADWRIRPLPEEMIRYAREDTHYLLYIYDKVREELWERGNEQPTQLQVVWQRSRDICLKKYIKPLFTDESYLEL----YRRQKKHLNTQQLAAFRLLFAWRDKIARQEDESTGYVLPNHMLLKIAEELPKEPQGIIAC 516 The following BLAST results are available for this feature:
BLAST of NO04G04360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04360 ID=NO04G04360|Name=NO04G04360|organism=Nannochloropsis oceanica|type=gene|length=3052bpback to top protein sequence of NO04G04360.1 >NO04G04360.1-protein ID=NO04G04360.1-protein|Name=NO04G04360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=930bpback to top Synonyms
Publications
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