Naga_100002g165, gene1779 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g165
Unique Namegene1779
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:315405..319983 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g165
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:315405..319983 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04360NO04G04360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1862rna1862-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1862rna1862Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1862

>rna1862-protein ID=rna1862-protein|Name=rna1862|organism=Nannochloropsis gaditana|type=polypeptide|length=1195bp
MATLDELLFHQPQPRMGIDDISVENSGGGGIFLKNLFKSLIQGTRASNAI
PAGGGLGNGEASDFAFHAATSSNFADKSLDTSKETLALLKQLVDYIIKTG
GKDQDESKQEEEEEALIAGLDDVEDPDAFGNLADLIEDLLDHVEYFLSTA
KRGEGEGIKEAGDQEENKKLASEWARLRRMAGAARQTASRYNTMLSQTLD
IPKPQHAFQDEIDNRRETCFRPCPHGDGKSVEGGNASEIPHPCETEIRNF
TYSTWQLQVPAENDMQVPLSLQESSPAGLVASPEALREMVQSIREELEKE
DEKAIAVDLEAHSLRSFQGLVCLMQISTRERDFLVDTLALRREVGPLLHD
LFTDHTVLKIFHGAESDIKWLQRDFGLYVVNLFDTFVAAQALHMPKKSLA
YLLQHYVGVVLDKQYQLADWRVRPLPEKMLHYAREDTHYLLHLHDCLRRD
LGREQGRIQEVLEGSQAVSLLRYRKETFDPEGYGRLLQGPRRWTGERGEG
GREGGLAPVQRETLKALYDWRDRVAREEDESPGYVCPDKLLLRLAKVRPL
TRGGVQECVGSGSALPPLVGARMEDMLQVVGAAGKKEGEEEDKARVFSAG
GGESSLGDGGTQRRVNTRTSESKATATTVHADAEKTPLSDYAFPVYVPAP
LEDSLSQERVSSTIHPPPTLPLPPVLNTEELYLSAGWTVASDGLQSMTPV
STGAGREGVRAGVVAATGNEGLESHRGLQHSIGLSVRVRSSNVEEASAPT
LQAGVEEREGGREGGGKCTEGDAQGPYATALDPLAGARALLRKEQGLPPV
NNAEVDFDGDSEEEEEEKGECEEEGEADEEAMPRSIADIYRISNRNRRRN
KEKKRQQDTRSEMSAGADGGAGEGVEGPARLGTTRSSSPTPGDTSLSLPL
DPELHEYFGDALDNAPSPVPLSHEGVSVLTNKRTRPEDTEEIVKFMSSIG
WVDANAPALPSSSRAVALPEQFLPHRQALLQSQVQPPNPHTGAHQPQQDP
YHCRRGTLNHDTQHAQFEAPRLKGDGGEGDHGGFGLPPPDSAAWSRQQHL
WPEQPPYVQQQQCGGRGRGSKTVGPPRGALVDGTGAGGVRGRDGLSSTQN
FHINKAAVESSRGPHGAPSPPSYNASSINTKAYPHQQALRQPMESSSRPP
SLAPPIGLNLNTQQKLRSQQLRYQEHRQQHQPQHQQHLPPQQFHK
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Synonyms
Publications