NO04G03280, NO04G03280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03280 vs. NCBI_GenBank
Match: EWM28689.1 (hmg-box dna-binding protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 1029.2 bits (2660), Expect = 8.600e-297 Identity = 584/1060 (55.09%), Postives = 706/1060 (66.60%), Query Frame = 0 Query: 10 EKGASSEAGAA-MPPSSSHAKEESLALKELLPEGSRMTMAPATRKNAVTLWACSPNGEMKVIDPLTGALATNPNTQEAVELTAVEGTPTCLALAHGQTALAIGMESGKVEYNSVTWGEGSVPEFSFEDFLVRCTSAVRDVAFSPTDKWVAVASEDLELRLVEMDGREVSSLRKHDGSVRSVCFDPKEEYLVSLGMDGYAMVWDLATKQCVFSKKVLEKESKH--QPGQVVPKAAWKPDGSLLALPGSRQPVLVERGSWKVVTLSATTMAHTAEIGFLXXXXXXXXXXXXXXXXXXVVWAAPRSATNALRATQSYVEWKGGNE-----STQLTVREMFWVGDRKLAVLNHLGALGLQSVP------AASTGVFLAAYEEGNGERSTAVDSSPVD-----KTSMVTKASDSD---SDSEAFTPKKSNRFLDDEAASVDGAEGKDGKGDXXXXXXXXXXXXXXXXGDRHHRESMADAALMQVPHMQGPFLPSSSPLDATKRYLVWSLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFIMGSIAEDGAIFASAAF--LGADADRRXXXXXXXXXSTVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGAASQALHYQLLDVRRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLLETSRLQRNKMDSFWPVGVLNGSLMCSLLKGGEEHPSTNPKPLVSSLPLKLPLVVSNNDQALQKLEETRLLAKTFLHQKLHXXXXXXXXXXXXXXXXXXLLRDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYSLPQVAARISELMAARFPPAYE----EDEVENWAPNRTSRAGTGNRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPARPQLSR-RGIGSSPPFKPGRGKADAAGFGAGGSRNPFAVKKDASGSMPVEKRVRGIAESLGSLVGSPSPKKPVLAKTSTFVSEIRSKKKHDRRA 1041 ++ A S GAA +P A LALKELL EGS M+ A WACSP+GE+++ID TG +A +P TQ V+LTAV+GTP CLAL QTALAIGMESGKVE+N V+W E PEF FEDFLVRCTSAVRD+A SPT KW AV S DLELRL+E+ R+ + LRKHDG V S+CFDPKEEYLVSLG DG ++W+LATK C+FSKKV E +S + QPG +PK+AW PDGS+LALPGSR P L+ERG+W+VV SA+ +AHTAEI L V+WA P+ AL Q Y++ + NE S +R++ W+ R+LAVL+ +G G+++VP S+ V + + +G+ + D++P + +T + + + + S+ TP+K + L + EG +G + D H + + + H+QGPFLPSSSP+DA KR+LVW+LVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRF MGS+AE+GAIFASA + D + STVFFRPFANYS KNQWL+TLPK EGAL VAVG RW AVATTRQWVRLFTFSGLQEG+++ PGP+VTMVG+G+LLA+FYHGG PL++ STG+ASQ+LHYQLLD+RRT VV GPV LSP SLL WAGF N D+LH+MDSEGL+S LVRGF W+WTP+LE+SRL RNKMDSFWPVGV NGSLMCSLL+GGEEHP TNPKPLVSSLP K P V+SNND AL KLEE R L+KTFL QKL+ +LR+QASYDAHLVKMIQQAGA ENGERMLELAE LTL KSL LA+R+ADHYSLPQVAARIS+L+A RFPP + +E EN P + +R SPARP+ S+ IG+S GR A+ +G SRNPFA+ KDA G P EKR IAESL L+ SPSPKKPVL+K+STFVSEIRSKKKHDRRA Sbjct: 14 DQNAQSHKGAAEIPLIKDDAPLLPLALKELLVEGSCMSFAKPREGMEKFSWACSPDGEIQIIDLCTGTVAVDPTTQGPVKLTAVDGTPICLALTREQTALAIGMESGKVEFNRVSW-ENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPG--IPKSAWSPDGSVLALPGSRHPQLLERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVL-----DYDHIKEERE-TIPPYSHLQGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAE-----SGISRNPFAM-KDAEGKKPAEKRSCSIAESLAPLM-SPSPKKPVLSKSSTFVSEIRSKKKHDRRA 1057
BLAST of NO04G03280 vs. NCBI_GenBank
Match: EWM28690.1 (hmg-box dna-binding protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 948.7 bits (2451), Expect = 1.500e-272 Identity = 531/957 (55.49%), Postives = 641/957 (66.98%), Query Frame = 0 Query: 112 MESGKVEYNSVTWGEGSVPEFSFEDFLVRCTSAVRDVAFSPTDKWVAVASEDLELRLVEMDGREVSSLRKHDGSVRSVCFDPKEEYLVSLGMDGYAMVWDLATKQCVFSKKVLEKESKH--QPGQVVPKAAWKPDGSLLALPGSRQPVLVERGSWKVVTLSATTMAHTAEIGFLXXXXXXXXXXXXXXXXXXVVWAAPRSATNALRATQSYVEWKGGNE-----STQLTVREMFWVGDRKLAVLNHLGALGLQSVP------AASTGVFLAAYEEGNGERSTAVDSSPVD-----KTSMVTKASDSD---SDSEAFTPKKSNRFLDDEAASVDGAEGKDGKGDXXXXXXXXXXXXXXXXGDRHHRESMADAALMQVPHMQGPFLPSSSPLDATKRYLVWSLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFIMGSIAEDGAIFASAAF--LGADADRRXXXXXXXXXSTVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGAASQALHYQLLDVRRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLLETSRLQRNKMDSFWPVGVLNGSLMCSLLKGGEEHPSTNPKPLVSSLPLKLPLVVSNNDQALQKLEETRLLAKTFLHQKLHXXXXXXXXXXXXXXXXXXLLRDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYSLPQVAARISELMAARFPPAYE----EDEVENWAPNRTSRAGTGNRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPARPQLSR-RGIGSSPPFKPGRGKADAAGFGAGGSRNPFAVKKDASGSMPVEKRVRGIAESLGSLVGSPSPKKPVLAKTSTFVSEIRSKKKHDRRA 1041 MESGKVE+N V+W E PEF FEDFLVRCTSAVRD+A SPT KW AV S DLELRL+E+ R+ + LRKHDG V S+CFDPKEEYLVSLG DG ++W+LATK C+FSKKV E +S + QPG +PK+AW PDGS+LALPGSR P L+ERG+W+VV SA+ +AHTAEI L V+WA P+ AL Q Y++ + NE S +R++ W+ R+LAVL+ +G G+++VP S+ V + + +G+ + D++P + +T + + + + S+ TP+K + L + EG +G + D H + + + H+QGPFLPSSSP+DA KR+LVW+LVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRF MGS+AE+GAIFASA + D + STVFFRPFANYS KNQWL+TLPK EGAL VAVG RW AVATTRQWVRLFTFSGLQEG+++ PGP+VTMVG+G+LLA+FYHGG PL++ STG+ASQ+LHYQLLD+RRT VV GPV LSP SLL WAGF N D+LH+MDSEGL+S LVRGF W+WTP+LE+SRL RNKMDSFWPVGV NGSLMCSLL+GGEEHP TNPKPLVSSLP K P V+SNND AL KLEE R L+KTFL QKL+ +LR+QASYDAHLVKMIQQAGA ENGERMLELAE LTL KSL LA+R+ADHYSLPQVAARIS+L+A RFPP + +E EN P + +R SPARP+ S+ IG+S GR A+ +G SRNPFA+ KDA G P EKR IAESL L+ SPSPKKPVL+K+STFVSEIRSKKKHDRRA Sbjct: 1 MESGKVEFNRVSW-ENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPG--IPKSAWSPDGSVLALPGSRHPQLLERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVL-----DYDHIKEERE-TIPPYSHLQGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAE-----SGISRNPFAM-KDAEGKKPAEKRSCSIAESLAPLM-SPSPKKPVLSKSSTFVSEIRSKKKHDRRA 941
BLAST of NO04G03280 vs. NCBI_GenBank
Match: XP_005855881.1 (wd repeat and hmg-box dna-binding protein 1, partial [Nannochloropsis gaditana CCMP526] >XP_005856004.1 wd repeat and hmg-box dna-binding protein 1, partial [Nannochloropsis gaditana CCMP526] >EKU20352.1 wd repeat and hmg-box dna-binding protein 1, partial [Nannochloropsis gaditana CCMP526] >EKU20474.1 wd repeat and hmg-box dna-binding protein 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 304.3 bits (778), Expect = 1.500e-78 Identity = 137/175 (78.29%), Postives = 157/175 (89.71%), Query Frame = 0 Query: 561 STVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGAASQALHYQLLDVRRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLLETSRLQRNKMDSFWPVG 736 STVFFRPFANYS KNQWL+TLPK EGAL VAVG RW AVATTRQWVRLFTFSGLQEG+++ PGP+VTMVG+G+LLA+FYHGG PL++ STG+ASQ+LHYQLLD+RRT VV GPV LSP SLL WAGF N D+LH+MDSEGL+S LVRGF W+WTP+LE+SRL+RNKMDSFWPVG Sbjct: 20 STVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLRRNKMDSFWPVG 194
BLAST of NO04G03280 vs. NCBI_GenBank
Match: CBJ33162.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 288.5 bits (737), Expect = 8.300e-74 Identity = 248/874 (28.38%), Postives = 372/874 (42.56%), Query Frame = 0 Query: 47 MAPATRKNAVTLWACSPNGEMKVIDPLTGA---------LATNPNTQEAVELTAVEGTPTCLALAHGQTALAIGMESGKVEYNSVTWGEGSVPEFSFEDFLVRCTSAVRDVAFSPTD-KWVAVASEDLELRLV-EMDGREVSSLRKHDGSVRSVCFDPKEEYLVSLGMDGYAMVW-------DLATKQCVFSKKVLEKESKHQPGQV--VPKAAWKPDGSLLALPGSRQPVLVERGSWK---VVTLSATTMAHTAEIGF-LXXXXXXXXXXXXXXXXXXVVWAAPRSATNALRATQSYVEWKGGNESTQLTVREMFWVGDRKLAVLNHLGALGLQSVPAASTGVFLAAYEEGNGERSTAVDSSPVDKTSMVTKASDSDSDSEA-FTPKKSNRFLDDEAASVDGAEGKDGKGDXXXXXXXXXXXXXXXXGDRHHRESMADAALMQVPHMQGPFLPSSSPLDATKRYLVWSLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFIMGSIAEDGAIFASAAFLGADADRRXXXXXXXXXSTVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGAASQALHYQLLDVRRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLLETSRLQRNKMDSFWPVGVLNGSLMCSLLKGGEEHPSTNPKPLVSSLPLKLPLVVSNNDQALQKLEET----RLLAKTFLHQKLHXXXXXXXXXXXXXXXXXXLLRDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYSLPQVAARISELMAARFPPAYEED 892 M AT + + ++A G +KV DP + + L N E + +TAV A++ LA+G+ +G V+ + +P+ F+ L R T+ V +A+ D +A SE+ +R+V + +V +L G V+SV +DP+ ++L + G DG VW DL+T + V S+ KE+ + + K AW PDG L++ G+ P+++ R SWK +V +A HT EI VVW A +++V + Q R + W+ +A L+ G GV +Y+ S T + A + +D +A K S++ L DE A AE KDG GD ++ Q PF PSS+PL T+RYL W+ VG IVS + E +SVAVG W A AT RQ VRLF+ SGLQ + PGP+V+MVG GD+L + +H G P+ D Q L Y+LLDV + G + LSP S LTW G S ++ MDS GLVS L R FGW WTPLL+T ++ ++K FWPVGV++G L+ + LK GEEHP+ P+P+++++PL S + + + K +++ AK H L+ A D +VK IQ+A A E ER ++L+ +L L KS ++AI+VA+H+ L +AA + + M A+F +ED Sbjct: 20 MDAATTSDGLRIFAGGAEGMVKVFDPKSSSIQDAVAELNLDVNDEGDEGLAVTAV-------AVSPAGDELAVGLRNGDVKLH-------GLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLTDMSGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDDLST-EVVMSESYFVKEAIGGSAEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPENAEDGGHTKEITIAAFSPDGGQHLATAALDGRVVVWNVEDKL-----AVKTFV------NTDQENWRHLKWLDKSTVAALSIGG------------GVCTLSYDPVTAAAKPTEKSCGNSATEYLKDAGEEPADRQAGRRGKGSSKHLFDEEA----AEDKDGNISEADTAEIADGADDIAAGD----------ITVETTPRQDPFQPSSTPLGDTRRYLCWNRVGTIVSVD------------------------------------------------------------------------------------EESVVSVAVGRGWVAAATNRQLVRLFSASGLQGETIMLPGPVVSMVGSGDVLMVAFHKGEPIGD------GQNLGYKLLDVGGKRELSKGGLCLSPGSELTWLGSSEEGMVMAMDSAGLVSALTRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPRPVITAVPLTAICAQSQDGEEMSKFDKSFPAMEARAKQRKFNLDHGLVMGDDVSAEPEEMEGELMTQLAKLDTMVVKRIQEACAAEKPERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPDDED 751
BLAST of NO04G03280 vs. NCBI_GenBank
Match: XP_005855882.1 (hypothetical protein NGA_2078120, partial [Nannochloropsis gaditana CCMP526] >XP_005856005.1 hypothetical protein NGA_2078110, partial [Nannochloropsis gaditana CCMP526] >EKU20353.1 hypothetical protein NGA_2078110, partial [Nannochloropsis gaditana CCMP526] >EKU20475.1 hypothetical protein NGA_2078120, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 271.2 bits (692), Expect = 1.400e-68 Identity = 171/308 (55.52%), Postives = 194/308 (62.99%), Query Frame = 0 Query: 738 NGSLMCSLLKGGEEHPSTNPKPLVSSLPLKLPLVVSNNDQALQKLEETRLLAKTFLHQKLHXXXXXXXXXXXXXXXXXXLLRDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYSLPQVAARISELMAARFPPAYE----EDEVENWAPNRTSRAGTGNRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPARPQLSR-RGIGSSPPFKPGRGKADAAGFGAGGSRNPFAVKKDASGSMPVEKRVRGIAESLGSLVGSPSPKKPVLAKTSTFVSEIRSKKKHDRRA 1041 NGSLMCSLL+GGEEHP TNPKPLVSSLP K P V+SNND AL KLEE R L+KTFL QK + +LR+QASYDAHLVKMIQQAGA ENGERMLELAE LTL KSL LA+R+ADHYSLPQVAARIS+L+A RFPP + +E EN P + +R SPARP+ S+ IG+S GR A+ +G SRNPFA+ KDA G P EKR IAESL L+ SPSPKKPVL+K+STFVSEIRSKKKHDRRA Sbjct: 2 NGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKQYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAE-----SGISRNPFAM-KDAEGKKPAEKRSCSIAESLAPLM-SPSPKKPVLSKSSTFVSEIRSKKKHDRRA 302
BLAST of NO04G03280 vs. NCBI_GenBank
Match: XP_016608630.1 (hypothetical protein SPPG_03715 [Spizellomyces punctatus DAOM BR117] >KND00591.1 hypothetical protein SPPG_03715 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 258.1 bits (658), Expect = 1.200e-64 Identity = 226/835 (27.07%), Postives = 371/835 (44.43%), Query Frame = 0 Query: 84 QEAVELTAVEGTPTCLALAHGQTALAIGMESGKVEYNSVTWGEGSVPEFSFEDFLVRCTSAVRDVAFSP----TDK--WVAVASEDLELRLVEM-DGREVSSLRKHDGSVRSVCFDPKEEYLVSLGMDGYAMVWDLATK--QCVFSKKVLEKESKHQPGQVVPKAAWKPDGSLLALPGS-RQPVLVERGSWKVVTLSATTMAHTAE-IGFLXXXXXXXXXXXXXXXXXXVVWAAPRSATNALRATQSYVEWKGGNESTQLTVREMFWVGDR-KLAVLNHLGALG--LQSVPAASTGVFLAAYEEGNGERSTAVDSSPVDKTSMVTKASDSDSDSE--AFTPKKSNRFLDDEAASVDGAEGKDGKGDXXXXXXXXXXXXXXXXG--------DRHH--RESMADAALMQVPHMQGPFLPSSSPLDATKRYLVWSLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFIMGSIAEDGAIFASAAFLGADADRRXXXXXXXXXSTVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGAASQALHYQLLDVRRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLLETSRLQRNKMDSFWPVGVLNGSLMCSLLKGGEEHPSTNPKPLVSSLPLKLPLVVSNNDQALQKLEETRLLAKTFLHQKLHXXXXXXXXXXXXXXXXXXLLRDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYSLPQVAARISELMAARFPPAYEEDE 893 ++A+++ +G TC+ + + G E V S+ G+ ++ L+RCT VRDV P T+K W A+AS++L+++LV+ D + +LR H ++S+ FD + E+LVS G DG MVWDL + +C + + S + + + +W G A+PG V++E +W+ L + A+ ++ I + +W N L Q+ + + + W L + + LG + +VPA +A E+G ER ++ VD+ + D E + + F +DE D DG G G +R + R M + L +Q F P ++PL A +RYL +++VG I + +L H+ + +EF D S RP FTD++ + M + E GA FAS A G ST+F+RPF ++TK W + E ++A+ + AT+++++R F++SGLQ ++S PGP+VTM G+GD L I YH G Q L Y L V V + +SP S L WAG S+L I V DS G++ L+R + W P+L++ ++ K + +WPV V+ LMC KG + P P+PL+S +PL+ P + + +EE +L + L LL+ D +VK+I A E +R L+L L K++ AI++A + LP +A R++ + R + +E Sbjct: 54 EDAIKVEQHKGAITCIHV--DSERIVTGSEDHSVCLYSLPTGQ-------YQRLLLRCTLTVRDVVLRPGRHGTNKAQWAAIASDELDIKLVDTEDITNIMTLRGHRRGLKSLSFDSRGEFLVSAGSDGELMVWDLRGEKPKCERVLRSIIATSDPETNEYC-RMSWHSSGKHFAIPGKLGDTVILEAYTWR--HLYSLKEANQSDCIALVAWSNSGSLLATVTVQGRLCIWKPDDDRKNPLFRDQA-----------KCRITGLAWHPKADDLCMTDELGRMSYWANAVPA-------SAQEKGELERLFEEEAMEVDEGDEQRSDTPGKKDDELAQYNASMLDDFGEDENPD-DFVVDDDGAGYANPLDKPGQLKKYYEKGRAKVLADLEREYGGRRQMDLSGL----EVQEAFQPGATPLQADRRYLAFNMVGVIYTIDLHTHHNVNVEFHDRSIRPFHFTDYHNYSMACLGESGACFASEASSG-------------NPSTLFYRPFDTWATKADWTMHFRETESVKAIAITSSGPVAATSQRYLRFFSYSGLQTFVMSLPGPVVTMTGKGDWLLIIYHAG------GVYHGEQNLAYMLFHVPTKKSVRRDGLPISPGSTLQWAGISDLGIPAVYDSAGVLRNLMRHNDFAWVPVLDSRIVRGEKQEWYWPVEVMEDRLMCITCKGLDRSPPF-PRPLMSDIPLQAPFLDMDTPNG---VEEEKLFRLSVLSS---HNRGEAEERGEVDLREKDLLKQDVEMDKIIVKLILTACKAEKVQRALDLCGSLHTIKAIDGAIKIAVMHHLPALAERMNIVKEGRLRQERQSEE 827
BLAST of NO04G03280 vs. NCBI_GenBank
Match: XP_005822290.1 (hypothetical protein GUITHDRAFT_146613 [Guillardia theta CCMP2712] >EKX35310.1 hypothetical protein GUITHDRAFT_146613 [Guillardia theta CCMP2712]) HSP 1 Score: 243.8 bits (621), Expect = 2.300e-60 Identity = 182/638 (28.53%), Postives = 293/638 (45.92%), Query Frame = 0 Query: 134 FEDFLVRCTSAVRDVAFSPTDKWVAVASEDLELRLVEMDG-REVSSLRKHDGSVRSVCFDPKEEYLVSLGMDGYAMVWDL--ATKQCVFSKKVLEKESKHQPGQVVP----KAAWKPDGSLLALPGSRQPVLVERGSWKVVTLSATTMAHTAEIGFLXXXXXXXXXXXXXXXXXXVVWAAPRSATNALRATQSYVEWKGGNESTQLTVREMFW-VGDRKLAVLNHLGALGLQSVPAASTGVFLAAYEEGNGERSTAVDSSPVDKTSMVTKASDSDSDSEAFTPKKSNRFLDDEAASVDGAEGKDGKGDXXXXXXXXXXXXXXXXGDRHHRESMADAALMQVPHMQGPFLPSSSPLDATKRYLVWSLVGNIVSQNLGDHNVIEIEFADA-SRRPIRFTDHYRFIMGSIAEDGAIFASAAFLGADADRRXXXXXXXXXSTVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGAASQALHYQLLDVRRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRG-FGWNWTPLLETSRLQRNKMDSFWPVGVLNGSLMCSLLKGGEEHPSTNPKPLV 762 FE + RC+ +RD+AFS ++A+AS+D E+++V ++ E +L+ H+G V+SV FDPK E+L+S G D +WD+ T++ S +VLEK++ VP + AW PDGS+ A+ GSR + ER WK + H + L V+W + + +S ++ N S L+ R W +A+++ G GL S + G +R VDS D V D D D + ++S + + P Q F P S+P++ +R+L ++ VG+I S+N +N IEIEFAD + RPIRF D F M ++ GA+FAS + D ST+ +RPF ++++++ W T+P+ E ++VA W A AT+++ +R+F+ S +Q V FPGP + M G D L YH S PS + Q L + L+++ T V GPV LSP S L W + ++ +MDSEG+V F W P+L+ +++ D FWP+ + + +L+ + K + +P P+P++ Sbjct: 105 FERNVTRCSLPIRDLAFSQDSSFLAIASDDSEIKIVNVNNVEEFKTLQGHEGGVKSVSFDPKNEFLLSTGSDRSLRIWDVESGTEKHKIS-QVLEKDAASSIKDGVPANLCRVAWSPDGSIFAVAGSRDIKIFEREDWK--EAESCVGGHLQNVTDLAFSSNGLYLLSVDTSGVIVIW--------DISSRESIKRYE--NSSKILSAR---WDPFSNSIALISVEGTYGLVDGVIPSDKI-------GPNDR---VDSDQAD----VDSVGDLDEDXXXXXXXXXXAY----------------------------------------KQSNVQSVSISRPIPQASFQPQSTPVELKRRFLTYTTVGHITSRNESTYNAIEIEFADINTHRPIRFNDFTGFTMAAMDASGAVFASPQVRERNGD--------LNLSTLSYRPFDSWASQSDWTTTMPENEEIMAVATSESWVAAATSKRILRIFSTSCVQLMTVMFPGPALCMHGCNDFLCFIYHTPS---SPSL-SGDQELQFLLMNISTKTTVARGPVCLSPGSKLEWLQVTETGMVAIMDSEGMVMVYSHAEFSGQWIPMLDIKTCNKHQRDWFWPIRITDSNLLGVVCKIEKRYPDV-PQPVL 659
BLAST of NO04G03280 vs. NCBI_GenBank
Match: CAG12499.1 (unnamed protein product, partial [Tetraodon nigroviridis]) HSP 1 Score: 238.0 bits (606), Expect = 1.300e-58 Identity = 233/854 (27.28%), Postives = 366/854 (42.86%), Query Frame = 0 Query: 104 GQTALAIGMESGKVEYNSVTWGEGSVPEFSFED-----FLVRCTSAVRDVAFSPTDKWVAVASEDLELRLVEM-DGREVSSLRKHDGSVRSVCFDPKEEYLVSLGMDGYAMVWDLATKQCVFSKKVLEKESKHQPGQVVPKAAWKPDGS-LLALPGSRQPVLVERGSWKVVTLSATTMAHTAEIGFLXXXXXXXXXXXXXXXXXXVVWAAPRSATNALRA------TQSYVEWKGGNESTQLTVREMFWVGDRKLAVLNHLGALGLQSVPAASTGVFLAAYEE--GNGERSTAVDSSPVDKTSMVTKASDSDSDSEAF----TPKKSNR--FLDDEAASVDGA--EGKDGKGDXXXXXXXXXXXXXXXXGDRHHRESMADAALMQVPHM-----------QGPFLPSSSPLDATKRYLVWSLVGNIVSQNLGDHNVIEIEFAD-ASRRPIRFTDHYRFIMGSIAEDGAIFASAAFLGADADRRXXXXXXXXXSTVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTG-AASQALHYQLLDV--RRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLLETSRLQRNKMDSFWPVGVLNG--SLMCSLLKGGEEHPSTNPKPLVSSLPLKLPLVVSNNDQ-----ALQKLEETRLLAKTFLHQKLHXXXXXXXXXXXXXXXXXXLLRDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYSLPQVAARISELMAARFPPAYEEDEVENWAPNRTSRAG----TGN 909 G+ ++ +++GK+ S SV +F D L R T+ V F+ + VA S D +++VE+ D +LR H+ V SV FDPK++YL S DG +VW++ + V S + +K + + + + AW+P + LA+P + L ERGSW+ V+ + + T + + VW RS R T + W T + +L +L+ +GA G + ++ Y++ + E +D D S V KA+ D D + F T + NR LDDE + G+ G+D G+ D ++A AA P + Q F P S+P T R++ W+ VG + S N N I++EF D A + T+ IM ++++ + A + S + F+++ T +W+ LP+ E A ++ +G WAAVATT +RLF+ G+Q + S PGP+V MVG G+ L + YH +TG QAL QLL R+ ++ P+ LSP+S L+W GF+ +DS+G+V L R G WTP+ T ++K D +W VGV L C K G +P T P+P V+ LP KLPL ++ ++ QK+ T + + + L R Q L+KM + E R +ELAE++T ++LAIR A +A R+SEL + E ++ E +TS G TGN Sbjct: 54 GEKVYSLALKNGKLVTAS---SNNSVQIHTFPDGDPDGILTRFTTNATHVTFNSSGSRVAAGSSDFMVKVVEVSDSSRQKTLRGHEAPVLSVAFDPKDDYLASASCDGSVVVWNIEEQTQVKSWPLTQKANDVSSAKSLCRLAWQPGAAEFLAVPVETKVNLYERGSWEHVSTLSDDLI-TQPVNVVAWSPCGQLLAAGGVGGSLTVWDV-RSKLCVERQKHEKGFTICCLAWHPSGGQIAYTDTQ------GRLGLLDGIGASGTDTSKQPASTKSAKDYDDLFDDDEDDRVMDEGLSDTHSPVKKAAVGDDDEDDFLMPATGRVRNRGLILDDENSLDTGSLRLGQDKFGE-----------------DDSSDGTLAPAAAPLPPSLPVYDGPLPTPPQKAFQPGSTPTHLTHRFMTWNSVGIVRSYNDEQDNAIDVEFHDTAVHHAMHLTNSLGHIMADLSQEAVLLACPS-------------TEELASKLQCLHFSSWDTNKEWMVDLPQGEDAKALCLGQGWAAVATTALMLRLFSIGGVQREIFSLPGPVVCMVGHGEQLLVVYH-------RATGFDGEQALGVQLLQFGRRKRQIIKGEPLPLSPRSHLSWLGFTAEGTPCYVDSDGVVRLLNRSLGNTWTPVCNTRETCKSKSDHYWVVGVHENPQQLRCIPCK-GSRYPPTLPRPAVAILPFKLPLCQTSTEKGQMEVTSQKMTVTFMAPEQYWRSVLFHNHYGFLSSSGYEIDEEGQSRSQKEQQELLMKMFALSCKLEREFRCVELAELMT-HGVVSLAIRYASRSRRMALAERLSELALEKANQIQEVEQEEPDYSRQTSGYGHSGVTGN 857
BLAST of NO04G03280 vs. NCBI_GenBank
Match: XP_023762447.1 (WD repeat and HMG-box DNA-binding protein 1 [Lactuca sativa] >PLY86524.1 hypothetical protein LSAT_4X112460 [Lactuca sativa]) HSP 1 Score: 236.5 bits (602), Expect = 3.700e-58 Identity = 207/800 (25.87%), Postives = 353/800 (44.12%), Query Frame = 0 Query: 97 TCLALAHGQTALAIGMESGKVEYNSVTWGEGSVPEFSFEDFLVRCTSAVRDVAFSPTDKWVAVASEDLELRLVE-MDGREVSSLRKHDGSVRSVCFDPKEEYLVSLGMDGYAMVWDLATKQCVFSKKVLEKESKHQPGQVVPKAA--WKPDGSLLALPGSRQPVLV--ERGSWKVVTLSATTMAHTAEIGFLXXXXXXXXXXXXXXXXXXVVWAAPRS---ATNALRATQSYVEWK-GGNESTQLTVREMFWVGDRKLAVLNHLGALGLQSVPAASTGVFLAAYEEGNGERSTAVDSSPVDKTSMVTKASDSDSDSEAFTPKKSNRFLDDEAASVDGAEGKDGKGDXXXXXXXXXXXXXXXXGDRHHRESMADAALMQVPHMQGPFLPSSSPLD-ATKRYLVWSLVGNIVSQNLGDHNVIEIEFADASRRP--IRFTDHYRFIMGSIAEDGAIFASAAFLGADADRRXXXXXXXXXSTVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGAASQALHYQLLDVRRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLLETSRLQRNKMDSFWPVGVLNGSLMCSLLKGGEEHPSTNPKPLVSSLPLKLPLVVSNNDQALQKLEETRLLAKTFLHQ-KLHXXXXXXXXXXXXXXXXXXLLRDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYSLPQVAARISELMAAR 884 T LAL+ + LA G V+ GE FE + R T +R ++F+ + +A +D ++L+ +DG L+ H GS+ S+ FDPK EYL S+ G ++W+L Q + L+ S + P +A W PDG +LA+ G R V++ + K+ TL HT + FL ++W + S + WK GN + V + V D + G ++ + + L EE E+ + S D + DS +SE T K+ F DE D + + ++ + + + P MQ F P +P+ +R+L ++++G+I + ++ IEI+F D R P TD++ F M S+ E+G++FA+ D+ ST+ +RPF +++ ++W + E +VA+GT W A T+ ++R++T GLQ +VS GP+VT G GD LA+ H PS + Q L +++L+V G +AL+P S+LTW GFS L DS G++ +G +W PL S+L++ K +S+W VG+ +L C L K ++ P PKP+++ L L +PL +++D + LE +++ L Q + + + D ++++I + R +EL ++L+L KS+ AI++ LP +A R + ++ R Sbjct: 65 TTLALSPNSSCLASGSSDRSVKLYKFPGGE-------FESNITRFTLPIRALSFNRSGTMLAAGGDDDGIKLINTIDGSVARVLKGHRGSITSISFDPKSEYLASVDSFGTVIIWEL---QSGTTLHTLKNISHNTPPDFTTLSALSWSPDGEMLAVSGLRNDVVMYDRDTAEKLFTLRG---EHTQPVCFLAFSLNGKYISTSGLDKQVLIWDVAKKQDIERQKFDEVISCMTWKPHGNALAVIDVMGKYGVWDSVVPSSMTSPTEGGPTLDSKKSDGLLFFDEE---EKEISTSGSMSDH----GEEEDSFMNSEQPTRKRLRNFKYDE----DSDDDVNDMSLLPKVESNKKRSTADVANMKNGKGTQTGVVAITGPKMQEAFQPGVTPVQFGKRRFLCYNMLGSITTMEHDGYSHIEIDFHDTGRGPRVPAMTDYFGFTMASLNENGSVFANP----CKGDKN--------MSTLMYRPFRSWANNSEWSMRFEE-EEVKAVALGTSWVAAVTSLNFLRIYTDGGLQRHVVSLDGPVVTASGFGDELAVVTHS-----SPSLPSNEQMLEFRVLNVPNGRQSIRGKLALTPGSILTWFGFSEEGQLTSFDSMGVLRVFSNQYGGSWFPLFSASKLKK-KDESYWVVGLNKTNLFCILCKSPDKFPQVVPKPVLTLLDLSIPL--ASSDLGAEALENEFIISNMHLSQIQRKIEEKEAMGDDDTTSLEDEAFNIETALDRCILRLIASCCNGDKLVRAIELVKLLSLEKSVRGAIKLVTALKLPNLAERFNTILEER 819
BLAST of NO04G03280 vs. NCBI_GenBank
Match: XP_006676285.1 (hypothetical protein BATDEDRAFT_84660 [Batrachochytrium dendrobatidis JAM81] >EGF83942.1 hypothetical protein BATDEDRAFT_84660 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 235.3 bits (599), Expect = 8.300e-58 Identity = 209/797 (26.22%), Postives = 340/797 (42.66%), Query Frame = 0 Query: 133 SFEDFLVRCTSAVRDVAFSPTDKWVAVASEDLELRLVEM-DGREVSSLRKHDGSVRSVCFDPKEEYLVSLGMDGYAMVWDL-ATKQCVFSKKVLE--------KESKHQPGQVVPK----------AAWKPDGSLLALPGSRQP-VLVERGSW----KVVTLSATTMAHTAEIG--FLXXXXXXXXXXXXXXXXXXVVWAAPRSATNALRATQSYVEWKGGNESTQLTVREMFWVGDRKLAVLNHLGALGLQSVPAASTGVFLAAYEEGNGERSTAVDSSPVDKTSMVTKASDSDSDSEAFTPKKSNRFLDDE--AASVDGAEGKDGKGDXXXXXXXXXXXXXXXXGDRHHRESMADAALMQVPHMQGPFLPS--SSPLDA-----------TKRYLVWSLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFIMGSIAEDGAIFASAAFLGADADRRXXXXXXXXXSTVFFRPFANYSTKNQWLFTLPKMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGMVSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGA--ASQALHYQLLDVRRTTVVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLLETSRLQRNKMDSFWPVGVLNGSLMCSLLKGGEEHPSTNPKPLVSSLPLKLPLVVSNNDQALQKLEETRLLAKTFLHQKL-HXXXXXXXXXXXXXXXXXXLLRDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYSLPQVAARISELMAARF 885 S + + R T + +AFSP KW+++ ++D E++L+ + D +L H +++ V F PK+ +VS DG +W L K KV + ES ++ + W P GS A G RQ V+V+ G+W K++T ++ + G L V + A A AT W + LT+ ++ +G + A+ L P TG ++ + T + S D+ + T DS+ + N +D+E D DG G +R ++++ L + P L S S+ + A KRYL ++L+G + S H + +EF D S+RP FTDHY + M ++ E GA+FA A ST+FFRP N+ +K++W L E AL+VA+ VAT ++R F++ G Q G+ S GPI+TM G L I YH S+GA +Q++ + L+D + + + +SP S L W GFS+ I D++G++ G+ +W PLL+T ++ K D +W +GV+ MC + K + PKP+++ LPL++P N ++EE+ K FL K+ L + + D ++K+I A E +R L+L ML +KSL A ++A H LP +A+RI+ + AR+ Sbjct: 100 SLKSVIYRSTLDITHLAFSPNGKWISIGTDDGEVKLICIKDTTRTIALEGHSNTIKFVAFHPKDNIVVSSSTDGTLRIWRLNYAKNAAHDNKVSKIPSDMVDSAESVKVMRDLISRPTAGINDLGYITWHPSGSHFATRGRRQEVVVVQNGTWNIMYKLITPDPASVLQYSPNGMYLLTVGVKEHFCIWRPEVDREVPITNEKFAIPATGAT-----WH-PRSNELLTIDSIYNIGYIEKAIPAEL--------PHPVTGQEKKIVKQ---LQKTDFEQSKTDRRNNTT-----DSNMATYNNYADNEEIDEEEYEEMCDFVVDDDGAG---YLEDLKRPSDALRYKERSRATALSELQLGGLSCYNQPILGSTFSNEIQAAFQSGSTAELNNKRYLAFNLIGVVSSLKSDVHWTVNVEFHDKSQRPFHFTDHYGYTMSALNESGAVFACQA-------------TSSTPSTIFFRPLDNWPSKDEWTVQLAIKESALAVALTKMGIVVATDLGYLRYFSYGGSQIGIQSLAGPILTMAGHAKYLFIAYH--------SSGAFHGNQSVSFILMDAEKRKTIHRDNLPISPASTLEWVGFSDTMIPLTYDTKGILRGMFLHQDASWVPLLDTDVVRGTKQDHYWALGVVGSQFMCIICK--NDKTPQFPKPIINELPLQVPFCQFNLTST--QMEESFFQQKLFLRHKIAENSMNMDEFSDNDSHDTDMFLHENLALDKTVLKLIHGACTAERSQRALDLCSMLHSTKSLEGATKLAIHLHLPNLASRINSIKEARY 846 The following BLAST results are available for this feature:
BLAST of NO04G03280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03280 ID=NO04G03280|Name=NO04G03280|organism=Nannochloropsis oceanica|type=gene|length=5064bpback to top protein sequence of NO04G03280.1 >NO04G03280.1-protein ID=NO04G03280.1-protein|Name=NO04G03280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1041bpback to top Synonyms
Publications
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