jgi.p|Nanoce1779_2|538229, gene_2103 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|538229
Unique Namegene_2103
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:817938..821655 +

Link to JBrowse

Properties
Property NameValue
TranscriptId538315
ProteinId538229
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:817938..821655 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03280NO04G03280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|538229mRNA_2103-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|538229mRNA_2103Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|538229

>mRNA_2103-protein ID=mRNA_2103-protein|Name=jgi.p|Nanoce1779_2|538229|organism=Nannochloropsis oceanica|type=polypeptide|length=923bp
MTGSAGFGVEKGASSEAGAAMPPSSSHAKEESLALKELLPEGSRMTMAPA
TRKNAVTLWACSPNGEMKVIDPLTGALATNPNTQEAVELTAVEGTPTCLA
LAHGQTALAIGMESGKVEYNSVTWGEGSVPEFSFEDFLVRCTSAVRDVAF
SPTDKWVAVASEDLELRLVEMDGREVSSLRKHDGSVRSVCFDPKEEYLVS
LGMDGYAMVWDLATKQCVFSKKVLEKESKHQPGQVVPKAAWKPDGSLLAL
PGSRQPVLVERGSWKVVTLSATTMAHTAEIGFLAWAPDGQMLSTSGADRR
VVVWAAPRSATNALRATQSYVEWKGGNESTQLTEGNGERSTAVDSSPVDK
TSMVTKASDSDSDSEAFTPKKSNRFLDDEAASVDGAEGKDGKGDEDLEEE
EPAPEDYDADGDRHHRESMADAALMQVPHMQGPFLPSSSPLDATKRYLVW
SLVGNIVSQNLGDHNMEGALSVAVGTRWAAVATTRQWVRLFTFSGLQEGM
VSFPGPIVTMVGRGDLLAIFYHGGSPLVDPSTGAASQALHYQLLDVRRTT
VVGNGPVALSPKSLLTWAGFSNLDILHVMDSEGLVSGLVRGFGWNWTPLL
ETSRLQRNKMDSFWPVGVLNGSLMCSLLKGGEEHPSTNPKPLVSSLPLKL
PLVVSNNDQALQKLEETRLLAKTFLHQKLHQQEILADEGLEEPRLEVELL
RDQASYDAHLVKMIQQAGANENGERMLELAEMLTLSKSLALAIRVADHYS
LPQVAARISELMAARFPPAYEEDEVENWAPNRTSRAGTGNRAQQQSRSGQ
GDEDSMSVAEDESENSTGPADDDEAKSPARPQLSRRGIGSSPPFKPGRGK
ADAAGFGAGGSRNPFAVKKDASGSMPVEKRVRGIAESLGSLVGSPSPKKP
VLAKTSTFVSEIRSKKKHDRRA*
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Synonyms
Publications