NO04G02430, NO04G02430 (gene) Nannochloropsis oceanica

Overview
NameNO04G02430
Unique NameNO04G02430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length612
Alignment locationchr4:661663..662274 +

Link to JBrowse

Properties
Property NameValue
DescriptionSulfotransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:661663..662274 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008146sulfotransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR037359NST/OST
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
BLAST of NO04G02430 vs. NCBI_GenBank
Match: EWM28634.1 (sulfotransferase [Nannochloropsis gaditana])

HSP 1 Score: 239.2 bits (609), Expect = 1.100e-59
Identity = 116/174 (66.67%), Postives = 141/174 (81.03%), Query Frame = 0
Query:   12 VQFLLPMSVAATLHNIYLSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRREEGLTWREHRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAPEAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARG 186
            V  +L      ++    L  G K++QTRRSI+LESE G RPCPS++I+GAQK GTTSLYEYLCQHPLVLRA RRETHYLD RWRREE LTW +HR+TY +FF+    +EN S + GES+PSY+L+SD+V+PRVR+LAP AK+LV+LRCPVARAYSQYQMV DP+G+ EQKKARG
Sbjct:  270 VHLILDYLEKDSIERSILPPGAKLHQTRRSIDLESEHGSRPCPSFLILGAQKSGTTSLYEYLCQHPLVLRARRRETHYLDWRWRREEHLTWEDHRETYLRFFHAALLNENPSCMTGESTPSYLLHSDIVLPRVRKLAPTAKLLVILRCPVARAYSQYQMVTDPEGSVEQKKARG 443          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: OQR81181.1 (hypothetical protein ACHHYP_16678 [Achlya hypogyna])

HSP 1 Score: 157.5 bits (397), Expect = 4.300e-35
Identity = 88/172 (51.16%), Postives = 109/172 (63.37%), Query Frame = 0
Query:   29 LSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRREEGLTWRE-------HRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAPEAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRS 194
            LS GT ++QTRR+++L SERG RP PS+ IIGAQK GTTSLY+Y+ QH LV+ ANR+ETHYLD  WR +  L   +       H  TYH+FF         S + GE++PSY+L   VV+ R R L P AK+L  LR PV RA+S Y M  DP G PEQ K RG    G +S
Sbjct:  221 LSPGTVLHQTRRTVDLSSERGSRPTPSFCIIGAQKAGTTSLYDYITQHDLVVPANRKETHYLD--WRFDASLPPLDTPEGRAAHLQTYHRFFRMDVLLPCPSVLSGEATPSYLLGGSVVIERFRALLPTAKILATLRNPVDRAFSHYNMTADPVGNPEQLKNRGHHALGGKS 390          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: CBN77079.1 (Sulfotransferase [Ectocarpus siliculosus])

HSP 1 Score: 149.8 bits (377), Expect = 9.000e-33
Identity = 80/171 (46.78%), Postives = 116/171 (67.84%), Query Frame = 0
Query:   27 IYLSHGTKINQTRRSINLE---SERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRW-RREEGLTWREHRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAPEAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRS 194
            + L+ G+K+ QTRRSI++E   + +G  P P+++++G QKCGTT LYE L QHPLV R  RRETH+ D  W  + E LT  + R++Y  FF       + S + GES+PSY+L  D+V+PR++ +A + ++LVMLR PV RAYS Y M +DP+GTP Q ++RG  G  S++
Sbjct:  237 VRLAPGSKLVQTRRSIDVEGLVTRQG--PDPAFVVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDWAWPAKGESLTVDQLRESYMAFFYAEELKSHPSIVTGESTPSYLLRGDLVIPRLKNVAGKTRLLVMLRDPVKRAYSHYHMAVDPEGTPAQLRSRGGGGWTSKT 405          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: XP_012201945.1 (hypothetical protein SPRG_20332 [Saprolegnia parasitica CBS 223.65] >KDO27481.1 hypothetical protein SPRG_20332 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 146.0 bits (367), Expect = 1.300e-31
Identity = 83/172 (48.26%), Postives = 106/172 (61.63%), Query Frame = 0
Query:   29 LSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRREEGLTWRE-------HRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAPEAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRS 194
            L+ GT ++QTRR++++ SE G RP PS+ IIGAQK GTTSLY+Y+ QH LV+ ANR+ETHYLD  WR +  L   E       H   Y +FF         S + GE++PSY+L   VV+ R + L P AK+L  LR PV RA+S Y M  DP G PEQ K RG    G +S
Sbjct:  209 LAPGTVLHQTRRTVDMSSEFGSRPTPSFCIIGAQKAGTTSLYDYITQHDLVVPANRKETHYLD--WRFDPKLPPIETPEGQAAHLAMYQRFFRMDILGPCPSVLSGEATPSYLLGGSVVIQRFQALMPGAKILATLRNPVDRAFSHYNMTADPVGNPEQLKNRGHHALGGKS 378          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: XP_008613676.1 (hypothetical protein SDRG_09512 [Saprolegnia diclina VS20] >EQC32990.1 hypothetical protein SDRG_09512 [Saprolegnia diclina VS20])

HSP 1 Score: 142.5 bits (358), Expect = 1.400e-30
Identity = 82/172 (47.67%), Postives = 105/172 (61.05%), Query Frame = 0
Query:   29 LSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRREEGLTWRE-------HRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAPEAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRS 194
            L+ GT ++QTRR++++ SE G RP PS+ IIGAQK GTTSLY+Y+ QH LV+ ANR+ETHYLD  WR +  L   E       H   Y +FF         S + GE++PSY+L   VV+ R + L   AK+L  LR PV RA+S Y M  DP G PEQ K RG    G +S
Sbjct:  221 LAPGTVLHQTRRTVDMSSEFGARPTPSFCIIGAQKAGTTSLYDYITQHDLVVPANRKETHYLD--WRFDPKLPPIETPEGQAAHLAMYQRFFRMDVLGPCPSVLSGEATPSYLLGGSVVIRRFQALMQGAKILATLRNPVDRAFSHYNMTADPVGNPEQLKNRGHHALGGKS 390          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: XP_009035707.1 (hypothetical protein AURANDRAFT_63322 [Aureococcus anophagefferens] >EGB09660.1 hypothetical protein AURANDRAFT_63322 [Aureococcus anophagefferens])

HSP 1 Score: 140.2 bits (352), Expect = 7.100e-30
Identity = 80/172 (46.51%), Postives = 110/172 (63.95%), Query Frame = 0
Query:   27 IYLSHGTKINQTRRSINLESERGIRP-CPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRRE-EGLTWREHRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVREL-APEAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRSRK 196
            + L  G ++ QTRRSI L SERG  P  P ++IIGAQK GTTS+YEYL QHPLV R  RRETH+LD RWR + +G      R  +  FF+     ++ S +  +S+PSY+L S++ +PR+R L A    M+VM+R P ARA S + M+ DP  TP Q+++RG +  G   R+
Sbjct:  705 VTLRVGDELTQTRRSIGLASERGTGPLAPHFLIIGAQKAGTTSMYEYLSQHPLVARGVRRETHFLDWRWRDDLDGDGAAASRHWHEAFFDAAAHADHPSLVALDSTPSYLLQSNLAIPRLRRLRAAAPPMIVMVRDPAARAASHFAMITDPRATPAQRRSRGSAWLGKSMRE 876          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: OQR81518.1 (hypothetical protein THRCLA_11659 [Thraustotheca clavata])

HSP 1 Score: 139.4 bits (350), Expect = 1.200e-29
Identity = 79/162 (48.77%), Postives = 105/162 (64.81%), Query Frame = 0
Query:   29 LSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRRE-EGLTWRE----HRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAPEAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARG 186
            LS GT ++QTRR+++L S+ G R  PS+ IIGAQK GTTSLY+Y+ QH LV+ ANR+ETHYLD R+  +   +T  E    H  TY +FF         S + GE++PSYML   +V+ R + LAP +K++  LR PV RA+S Y M  DP+G  EQ K RG
Sbjct:  219 LSPGTVLHQTRRTVDLASDFGKRHPPSFCIIGAQKAGTTSLYDYITQHDLVVPANRKETHYLDWRFLPQLPPITTPEGRVAHLKTYCRFFRMDILLPCPSVLTGEATPSYMLGGSIVIERFKALAPTSKIIATLRDPVDRAFSHYNMTADPEGNEEQLKNRG 380          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: XP_002178554.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50219.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 136.7 bits (343), Expect = 7.900e-29
Identity = 81/173 (46.82%), Postives = 106/173 (61.27%), Query Frame = 0
Query:   24 LHNIYLSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRREEGLTWREHRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAP-EAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRSRK 196
            L  I L  G K+ QTRRSI+    RG RP PS++I+GAQK GTTSLYEY+ QHPLV+ A RRETH LD RW  ++  + +  R   HKF+       + S + G+S+PSY+L S  V+PR+R +     K  VMLR P+ RA S + MV   +GTP Q KARG   +    R+
Sbjct:  320 LPRILLRPGEKLLQTRRSIDRLENRGSRPTPSFLILGAQKAGTTSLYEYIVQHPLVVPARRRETHCLDWRW-NDKLKSVKAQRAWCHKFYLTQELSLHPSCLTGDSTPSYLLDSRRVIPRIRNIFDWPLKFFVMLRNPIRRAESHFAMVTSSEGTPAQLKARGSEWRNKTFRE 491          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: XP_024582913.1 ((heparan sulfate)-glucosamine 3-sulfotransferase 1 [Plasmopara halstedii] >CEG46544.1 (heparan sulfate)-glucosamine 3-sulfotransferase 1 [Plasmopara halstedii])

HSP 1 Score: 135.6 bits (340), Expect = 1.800e-28
Identity = 82/180 (45.56%), Postives = 111/180 (61.67%), Query Frame = 0
Query:   24 LHNIYLSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRRE-------EGLT--WREHRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAPEA-KMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRS 194
            L+ I L  GT + QTRRS++L ++ G R  PS+IIIGAQK GTTSLY+Y+ QH LV  A R+ETHY D RW +E       EG    +R + DTY   F K       S + GE++PSY+L    V+ R++E+ P   K+LV++R PV RAYS Y M  D +G+ +QK+ RG     +RS
Sbjct:  211 LNPIDLKQGTIVWQTRRSVDLSTDYGKRIPPSFIIIGAQKAGTTSLYDYILQHDLVWPAKRKETHYFDWRWNKELPDSMTVEGAEKHFRYYEDTY---FEKNILHRFPSLMSGEATPSYILGGKTVIKRMKEVIPHCHKVLVIMRDPVERAYSHYSMTADTEGSEKQKRNRGHHHLEARS 387          
BLAST of NO04G02430 vs. NCBI_GenBank
Match: XP_008869328.1 (hypothetical protein H310_06154 [Aphanomyces invadans] >ETW02723.1 hypothetical protein H310_06154 [Aphanomyces invadans])

HSP 1 Score: 134.0 bits (336), Expect = 5.100e-28
Identity = 78/180 (43.33%), Postives = 110/180 (61.11%), Query Frame = 0
Query:   22 ATLHNIYLSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRRE-------EGLTWREHRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVREL-APEAKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRS 194
            +++  + L+ G  ++QTRRS++  +  G R  PS+IIIGAQK GTTSLY+Y+ QH LV+ + R+ETHY D RW          +G+T  +H+  YH+FF       N S   GE++PSYML   VV+ R + L + E K+LV+LR PV RA+S Y M  D +G  EQ K RG +    R+
Sbjct:  228 SSIPRVKLTPGMVLHQTRRSVDASTLYGTRVPPSFIIIGAQKAGTTSLYDYITQHDLVVPSIRKETHYFDWRWDSSLPPIDGPDGVT--KHKAMYHRFFRTDVLLPNPSIQTGEATPSYMLGGSVVIQRFKALVSAETKILVILRNPVDRAFSHYNMTADTEGNAEQLKNRGHAALDGRT 405          
The following BLAST results are available for this feature:
BLAST of NO04G02430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
50100150200250300350400450500550600Expect = 1.10e-59 / Id = 66.67Expect = 4.30e-35 / Id = 51.16Expect = 9.00e-33 / Id = 46.78Expect = 1.30e-31 / Id = 48.26Expect = 1.40e-30 / Id = 47.67Expect = 7.10e-30 / Id = 46.51Expect = 1.20e-29 / Id = 48.77Expect = 7.90e-29 / Id = 46.82Expect = 1.80e-28 / Id = 45.56Expect = 5.10e-28 / Id = 43.33SequenceEWM28634.1OQR81181.1CBN77079.1XP_012201945.1XP_008613676.1XP_009035707.1OQR81518.1XP_002178554.1XP_024582913.1XP_008869328.1
Match NameE-valueIdentityDescription
EWM28634.11.100e-5966.67sulfotransferase [Nannochloropsis gaditana][more]
OQR81181.14.300e-3551.16hypothetical protein ACHHYP_16678 [Achlya hypogyna... [more]
CBN77079.19.000e-3346.78Sulfotransferase [Ectocarpus siliculosus][more]
XP_012201945.11.300e-3148.26hypothetical protein SPRG_20332 [Saprolegnia paras... [more]
XP_008613676.11.400e-3047.67hypothetical protein SDRG_09512 [Saprolegnia dicli... [more]
XP_009035707.17.100e-3046.51hypothetical protein AURANDRAFT_63322 [Aureococcus... [more]
OQR81518.11.200e-2948.77hypothetical protein THRCLA_11659 [Thraustotheca c... [more]
XP_002178554.17.900e-2946.82predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_024582913.11.800e-2845.56(heparan sulfate)-glucosamine 3-sulfotransferase 1... [more]
XP_008869328.15.100e-2843.33hypothetical protein H310_06154 [Aphanomyces invad... [more]

Pages

back to top
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02430.1NO04G02430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02430.1NO04G02430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02430 ID=NO04G02430|Name=NO04G02430|organism=Nannochloropsis oceanica|type=gene|length=612bp
ATGTTCTTGGTCCTCATAGGCGTCGCAGCCACTGTCCAATTTCTTCTCCC
CATGAGCGTCGCAGCCACTCTTCATAACATATATCTCTCGCATGGAACCA
AGATCAACCAAACCCGCCGCTCGATCAACCTGGAGTCGGAACGAGGAATA
CGTCCCTGCCCTAGTTACATCATTATAGGCGCACAGAAGTGTGGAACCAC
GTCCTTGTATGAATATCTGTGTCAGCATCCCTTGGTGTTGAGGGCAAACA
GGCGGGAGACTCATTACCTGGATCGGCGGTGGCGGAGGGAGGAAGGGTTG
ACTTGGCGGGAGCACCGGGACACGTATCACAAGTTTTTCAACAAGACGTT
TCCAGACGAGAACTCATCACGCATAATTGGGGAATCATCGCCGAGCTATA
TGTTGTATAGCGACGTGGTGGTGCCGAGGGTAAGGGAGCTGGCGCCCGAG
GCCAAGATGCTGGTGATGCTCCGTTGTCCTGTGGCGAGGGCCTACAGTCA
GTACCAAATGGTGATTGACCCGGATGGCACCCCAGAGCAGAAAAAAGCTA
GGGGACGCTCTGGAAAGGGAAGTCGTTCGAGGAAGTGGTCGAGAAGGAGT
TGGAGGAGCTAG
back to top

protein sequence of NO04G02430.1

>NO04G02430.1-protein ID=NO04G02430.1-protein|Name=NO04G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=204bp
MFLVLIGVAATVQFLLPMSVAATLHNIYLSHGTKINQTRRSINLESERGI
RPCPSYIIIGAQKCGTTSLYEYLCQHPLVLRANRRETHYLDRRWRREEGL
TWREHRDTYHKFFNKTFPDENSSRIIGESSPSYMLYSDVVVPRVRELAPE
AKMLVMLRCPVARAYSQYQMVIDPDGTPEQKKARGRSGKGSRSRKWSRRS
WRS*
back to top
Synonyms
Publications