NO04G02070, NO04G02070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02070 vs. NCBI_GenBank
Match: EWM28621.1 (tRNA methyltransferase complex GCD14 subunit [Nannochloropsis gaditana]) HSP 1 Score: 461.1 bits (1185), Expect = 4.600e-126 Identity = 259/440 (58.86%), Postives = 293/440 (66.59%), Query Frame = 0 Query: 58 MDFALAQ--AQELAQQATPAKGATLSPSSSTVTKRRPRPFQAGDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASGKYIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSLDMDGEEGEVLAAVPL---------PVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVRHKQFDLWRTVMPKMDFGD-------------EELRNDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLFAKARSVMRGHTAFLTYAIACLHPP 474 MDFAL Q +E +Q+ TP+ T TKRR RPFQAGDMV++MERHD+YSH+YLEPGGMFQNRLGHFHHDD+IG+ VGAKV+SRSA G++IRLLLPSPELWT+SIKQRTQIVQDLDQSMVVF LGLRPGM VLESGTGSGAMSHAILR+ISP+GHLHTFEFNEARA +A+VDFE N+V HLVTV H DICQ+L D EE ++ P+ NG N A+ + + P VS+ P RTLRG++DAVFLDVP PWLAIPLAAAVLK NA +ATYSPC EQVFKTCEALREHNFHSIRTMEVRHKQF+L RT MP +DFGD E N R FAKAR VMRGHTAFLT+A+A LHPP Sbjct: 1 MDFALVQEWEREESQRGTPSTKPD-GRVVCTATKRR-RPFQAGDMVVVMERHDSYSHVYLEPGGMFQNRLGHFHHDDIIGKHVGAKVMSRSAGGRFIRLLLPSPELWTMSIKQRTQIVQDLDQSMVVFKLGLRPGMRVLESGTGSGAMSHAILRSISPHGHLHTFEFNEARAIDAQVDFERNRVSHLVTVMHGDICQDLSLSD---EESTIVCTSAHMETESDGKDPLGEHNGLAP------NGTAAASQPEAPPPLAHPPAVSVAPVARTLRGRIDAVFLDVPSPWLAIPLAAAVLKANARIATYSPCFEQVFKTCEALREHNFHSIRTMEVRHKQFELRRTCMPHLDFGDGDSVGVGEDLGGAAEKGNGVRGDDQNTAHARETGPKKSESEGMEAWRSKRKHREAEGGKDARPFAKARPVMRGHTAFLTFAVAGLHPP 429
BLAST of NO04G02070 vs. NCBI_GenBank
Match: GAX20040.1 (tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [Fistulifera solaris]) HSP 1 Score: 246.9 bits (629), Expect = 1.400e-61 Identity = 154/392 (39.29%), Postives = 201/392 (51.28%), Query Frame = 0 Query: 91 RPRPFQAGDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASG-KYIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSLDMDGEEGEVLAAVPLPVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVRHKQFDL--------WRTVMPKMDFGDEELR--NDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLFAKARSVMRGHTAFLTYAIACLH 472 R Q GD+V+IME D + Y+E GM+ NR GHF H D IG+ G+KV SR+ G + LL P+PELW S+ RTQIV +LDQS ++F L LRP M V+ESGTGSGAMSHAILRTI+P+G LHT+EFN+ RA AR +FE N V HLVTV H D+C ++ E A LP P S+ DAVFLD+P+PW A+P AA VLKPNA +A+YSPC+EQ +T EA+++ FHS++TME R ++ + + PK + D E R + A + A+ + MRGH+AFLT+A A LH Sbjct: 85 RKETIQVGDLVVIMESFDRLTFAYIEEKGMYSNRHGHFSHKDFIGKPFGSKVRSRNNQGYGFCFLLKPTPELWARSLTHRTQIVHELDQSQIIFQLYLRPNMTVVESGTGSGAMSHAILRTIAPHGKLHTYEFNKMRADTARNEFEKNGVSHLVTVHHRDVCAKI----------EAEAGFDLP----------------------------------PCSV-----------DAVFLDLPEPWHAVPHAAKVLKPNARIASYSPCVEQTQRTVEAMKKAGFHSMKTMEYRLQEHYVDEIEYKSPPKAKRPKFEAHDNEARIMSASAAGSASGNGEQSDDLSDEVETGDDGELAGDEMGEGNEIKAKMVVARPFASMRGHSAFLTFATAGLH 421
BLAST of NO04G02070 vs. NCBI_GenBank
Match: XP_002178514.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50179.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 242.3 bits (617), Expect = 3.400e-60 Identity = 134/286 (46.85%), Postives = 170/286 (59.44%), Query Frame = 0 Query: 96 QAGDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASG-KYIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSLDMDGEEGEVLAAVPLPVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVR 381 + GD+V+IME DN + +Y + G +F NR G+FHH+D IG+ G K+ SRS G ++ LL P+PELW S+ RTQIV +LDQS V+F L L+P M V+ESGTGSGAMSHAILRTI+P+G LHT+EFNE RA AR +F +N VGHLV+V H D+C G D LP P S+ D VFLD+P+PWLA+P AA V+KPNA LA+YSPC+EQ + E LR+ FHSI+TME R Sbjct: 2 RTGDLVVIMESFDNLAFVYAKEGEIFSNRNGNFHHNDFIGKPFGCKIRSRSHRGYGFVYLLKPTPELWARSLNHRTQIVHELDQSQVIFQLHLKPNMTVVESGTGSGAMSHAILRTIAPHGKLHTYEFNEHRADTARHEFANNGVGHLVSVHHKDVCGIRGDGGFD-----------LP----------------------------------PQSV-----------DGVFLDLPEPWLAVPHAAFVMKPNARLASYSPCVEQTQRMVETLRQSGFHSIKTMEYR 231
BLAST of NO04G02070 vs. NCBI_GenBank
Match: EJK71082.1 (hypothetical protein THAOC_07513 [Thalassiosira oceanica]) HSP 1 Score: 226.9 bits (577), Expect = 1.500e-55 Identity = 124/301 (41.20%), Postives = 175/301 (58.14%), Query Frame = 0 Query: 98 GDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASG-KYIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSL-----DMDGEEGEVLAAVPLPVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVRHKQFDLWRTVMP 393 GD+V++ E ++ + +Y + +F NR GHF H+ IG+ G K+ S + SG ++ LL P+PELW S+ RTQIV +LD SM+V L L P M V ESGTGSGAMSHAI+R+I+P G LHTFEFN+ RA +A+ +FE + +GHLV V H D+C + L + GE G+ A G+ + N E + T + + A+FLD+P+PWLA+P AA L PN + +YSPC+EQ +TC ALR + FHS+RT+E R K+F + +P Sbjct: 131 GDLVVVFESFNDLNFVYAKKDAIFSNRNGHFKHNSFIGKPYGCKIRSNNNSGLGFLYLLRPTPELWARSLPHRTQIVHELDASMIVHYLNLCPNMTVCESGTGSGAMSHAIMRSIAPRGMLHTFEFNKVRADKAKKEFEEHGLGHLVQVHHRDVCGKKSLLLQKSGEKPGEAGDEPKA--------GGSRDDGPNESENNGVEEDDG-------------TGGFLIGQAKAHAIFLDLPEPWLAVPHAAHTLCPNGRICSYSPCMEQTQRTCAALRRNGFHSLRTVEARLKEFYVASVELP 410
BLAST of NO04G02070 vs. NCBI_GenBank
Match: XP_005854625.1 (hypothetical protein NGA_2123900, partial [Nannochloropsis gaditana CCMP526] >EKU21739.1 hypothetical protein NGA_2123900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 225.3 bits (573), Expect = 4.300e-55 Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0 Query: 86 TVTKRRPRPFQAGDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASGKYIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRT 211 T TKRR RPFQAGDMV++MERHD+YSH+YLEPGGMFQNRLGHFHHDD+IG+ VGAKV+SRSA G++IRLLLPSPELWT+SIKQRTQIVQDLDQSMVVF LGLRPGM VLESGTGSGAMSHAILR+ Sbjct: 15 TATKRR-RPFQAGDMVVVMERHDSYSHVYLEPGGMFQNRLGHFHHDDIIGKHVGAKVMSRSAGGRFIRLLLPSPELWTMSIKQRTQIVQDLDQSMVVFKLGLRPGMRVLESGTGSGAMSHAILRS 138
BLAST of NO04G02070 vs. NCBI_GenBank
Match: XP_002288909.1 (hypothetical protein THAPSDRAFT_261852, partial [Thalassiosira pseudonana CCMP1335] >EED94345.1 hypothetical protein THAPSDRAFT_261852, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 221.1 bits (562), Expect = 8.100e-54 Identity = 115/290 (39.66%), Postives = 164/290 (56.55%), Query Frame = 0 Query: 96 QAGDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASG-KYIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSLDMDGEEGEVLAAVPLPVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVRHKQF 385 Q D+V+I E ++ + +Y P +F NR GHFHH+D IG+ G K+ SR+ G ++ LL P+PELW S+ RTQIV +LD +M+V L + P M V ESGTGSGAMSH LR+++P G LHT+EFN+ R +AR +F + +GHLV V H D+C + L ++G+ ++ H A+FLD+P+PWLA+P AA +KPN + +YSPC+EQ +TC ALR+H FHSI+T+E R K++ Sbjct: 2 QPTDLVVIFESFNDINFVYATPNDIFSNRNGHFHHNDFIGKPYGCKIRSRNNDGLGFLYLLRPTPELWARSLPHRTQIVHELDAAMIVHHLNVSPNMIVCESGTGSGAMSHVFLRSLAPMGKLHTYEFNKVRVEKARDEFVGHGLGHLVEVHHRDVCGKKALLKLNGQ------------------------------------SVAH---------------------AIFLDLPEPWLAVPHAAHTIKPNGRICSYSPCMEQTQRTCTALRQHGFHSIQTVEARLKEY 234
BLAST of NO04G02070 vs. NCBI_GenBank
Match: OEU16159.1 (tRNA methyltransferase, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 218.0 bits (554), Expect = 6.800e-53 Identity = 114/287 (39.72%), Postives = 159/287 (55.40%), Query Frame = 0 Query: 98 GDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASG-KYIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSLDMDGEEGEVLAAVPLPVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVRHKQ 384 G++V+I E D+ + Y E G +F NR GHFHHDD IG+ G K+ SR+ G ++ LL P+PELW+ S+ RTQI+ LD SM+VF L +RP M + ESGTGSGA+SH I+R+I+P G LHT+EFN+ RA A+++F +N V H+ V H D+C + G D + V DA+ LD+P+PW A+P AA +KPN+ + +YSPC+EQ KT A++ FHSI+TME R K+ Sbjct: 4 GNLVVIFENFDSSNFCYAEKGKIFNNRNGHFHHDDFIGKPYGCKIRSRNNRGWGFVYLLKPTPELWSQSLNHRTQIIHFLDASMIVFYLNIRPNMVICESGTGSGALSHCIMRSIAPKGMLHTYEFNQQRAETAKLEFANNGVSHISEVHHKDVCGKHGPGGFDRPQSSV--------------------------------------------------------DAIVLDLPEPWSAVPYAAHCIKPNSRIVSYSPCVEQAQKTIIAMKTSGFHSIKTMEFRLKE 234
BLAST of NO04G02070 vs. NCBI_GenBank
Match: CBJ27631.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 215.3 bits (547), Expect = 4.400e-52 Identity = 120/283 (42.40%), Postives = 156/283 (55.12%), Query Frame = 0 Query: 98 GDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASGKYIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSLDMDGEEGEVLAAVPLPVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVR 381 GDMV+ E + ++ ++Q R G FHHD++IG+ G++V SR+ G Y+ L P+PELW+ + RTQIVQD DQS+V+F L L+PG V+ESGTGSG MS AI+RTI+P+G LH+FEFNE RA A+ +FE N +G LV H D+C G GEE L G+ DAVFLD+P+PWLA+ A LKP L +YSPC+EQV KTCEALR FHS+ T+E R Sbjct: 30 GDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKG-YVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEE------------------------------------------------------LDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFR 257
BLAST of NO04G02070 vs. NCBI_GenBank
Match: XP_002998926.1 (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit, putative [Phytophthora infestans T30-4] >EEY69072.1 tRNA (adenine-N(1)-)-methyltransferase catalytic subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 202.2 bits (513), Expect = 3.900e-48 Identity = 118/331 (35.65%), Postives = 177/331 (53.47%), Query Frame = 0 Query: 68 LAQQATPAKGATLSPSSSTVTKRRPRPFQAGDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASGK-YIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSLDMDGEEGEVLAAVPLPVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVRHKQFDLWRTVMPKMDFG 398 +A + A+++ +++ K P + G +VI+ E H++ ++ Y + G ++QNR G F+H+DMIG+ G+K++SR + Y+ LL P+PELW+ +++ RTQIV LD S ++F GLR G V+ESGTGSGA++ + RT++P+GH+ TFEFN RA AR +F+ N + ++TV D C++ G E+E G +D VFLD+P PW A+ AA +LK A+YSPC+EQV KTC ALR NF IRT+E R ++ R +P DFG Sbjct: 1 MAMPSAEVNAASVTTIPNSMWKSLPL-IEEGSLVILFETHNSLTYCYAQRGAIYQNRHGAFYHNDMIGQPFGSKIISRKKNAHGYLILLAPTPELWSRALRHRTQIVFTLDASAIMFAAGLRSGSRVVESGTGSGALTTSFARTVAPHGHVFTFEFNAHRAEIAREEFKRNGLESVITVDCRDACEQ-------------------------------------GFPVELE----------------------GTIDMVFLDLPSPWKAVGHAAKMLKQGGFFASYSPCIEQVQKTCGALRSANFELIRTIETRLVPYNSRRIDLPVPDFG 271
BLAST of NO04G02070 vs. NCBI_GenBank
Match: OWZ09622.1 (TRNA (adenine-N(1)-)-methyltransferase catalytic subunit [Phytophthora megakarya]) HSP 1 Score: 201.8 bits (512), Expect = 5.100e-48 Identity = 115/309 (37.22%), Postives = 167/309 (54.05%), Query Frame = 0 Query: 90 RRPRPFQAGDMVIIMERHDNYSHIYLEPGGMFQNRLGHFHHDDMIGRSVGAKVVSRSASGK-YIRLLLPSPELWTLSIKQRTQIVQDLDQSMVVFMLGLRPGMHVLESGTGSGAMSHAILRTISPNGHLHTFEFNEARAREARVDFEHNKVGHLVTVRHADICQELGSLDMDGEEGEVLAAVPLPVNVMNGATATACTDMNNGASTEIEDTMIHSSSPLPVSITPTIRTLRGQMDAVFLDVPQPWLAIPLAAAVLKPNAGLATYSPCLEQVFKTCEALREHNFHSIRTMEVRHKQFDLWRTVMPKMDFG 398 + P + G +VI+ E H++ ++IY + ++QNR G F+H+DMIG+ G+K++SR + + Y+ LL P+PELW+ +++ RTQIV LD S ++F LR G V+ESGTGSGA++ + RT++P+GH+ TFEFN RA AR +F+ N + ++TV D C++ G E+E G +D VFLD+P PW AI AA +LK A+YSPC+EQV KTC ALR NF IRT+E R ++ R +P DFG Sbjct: 20 KSPSLIEEGSLVILFETHNSLTYIYAQRDAIYQNRHGAFYHNDMIGQPFGSKIISRKKNAQGYLILLAPTPELWSRALRHRTQIVFTLDASAIMFAAALRSGSRVVESGTGSGALTTSFARTVAPHGHVFTFEFNAHRAEIAREEFKRNGLEKVITVDCRDACEQ-------------------------------------GFPVELE----------------------GTIDMVFLDLPSPWNAIGHAAKMLKQGGFFASYSPCIEQVQKTCGALRNANFELIRTIETRLVPYNSRRIDLPVPDFG 269 The following BLAST results are available for this feature:
BLAST of NO04G02070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02070 ID=NO04G02070|Name=NO04G02070|organism=Nannochloropsis oceanica|type=gene|length=1717bpback to top protein sequence of NO04G02070.1 >NO04G02070.1-protein ID=NO04G02070.1-protein|Name=NO04G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=518bpback to top Synonyms
Publications
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