NO04G02040, NO04G02040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02040 vs. NCBI_GenBank
Match: XP_004336833.1 (4alpha-methyl-sterol C4-methyl-oxidase [Acanthamoeba castellanii str. Neff] >ELR14820.1 4alpha-methyl-sterol C4-methyl-oxidase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 164.5 bits (415), Expect = 5.800e-37 Identity = 93/251 (37.05%), Postives = 137/251 (54.58%), Query Frame = 0 Query: 49 WSDATIFAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQ-----TAEPFDKALFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKVRAPLPSI----TRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPI-LSPFSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTDKAYRMFAA 290 +S+ T++ G A+H + F++ +H + +L RY+IQ T E K L ++ +H + F V+ +++ G LPSI TR++ ++ L +T FYWTHRL H + YKR HKQHH F T V + +EYAHP E ++ V GPL++GSH+ + + RLWET D HSGY +P LSPFS+ + HD+HHS N G +G+ WDW+CGTD Y+ + A Sbjct: 9 YSERTLWMAGA-ALHTVTFVAFNVGLYFMHRYQILARYKIQPLKYPTEELIRKGLVDVSIKHAL-----APF-VLYLLWPLAERCGVHATPELPSITEVGTRVMVHLLVHILVQDTIFYWTHRLLHQPFLYKRIHKQHHQFYTPVGIASEYAHPAEDFLTQV-AFIAGPLIMGSHIFTLYLWLLLRLWETVDAHSGYALPFPLSPFSL---FGVADQHDYHHSQNKGCYGSFFGLWDWICGTDADYKKWKA 248
BLAST of NO04G02040 vs. NCBI_GenBank
Match: XP_005778071.1 (hypothetical protein EMIHUDRAFT_73824 [Emiliania huxleyi CCMP1516] >EOD25642.1 hypothetical protein EMIHUDRAFT_73824 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 164.5 bits (415), Expect = 5.800e-37 Identity = 88/182 (48.35%), Postives = 106/182 (58.24%), Query Frame = 0 Query: 116 PVML-IMYSGFHYSGTKVRAPL-PSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPI-LSPFSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTDKAYRMFAAKEKER 295 PV+L YS + G A L P+ T ++ +T FYW HR HH YK HKQHH FK V L TEYAHPLE N L T GPLLLGSHV V Y +LW++ D HSG +P+ LSP++++P HDFHHSHN+G FG FWD VCGTD AYR F K+K+R Sbjct: 41 PVLLYAAYSIYLARGAPSSAALIPTATELVAHLAFAIAVDDTMFYWAHRALHHPCVYKHIHKQHHEFKQPVGLATEYAHPLEE-ACNTLATALGPLLLGSHVAVSVGYMGLKLWQSIDAHSGMLLPVPLSPWNLLPGMDCAAAHDFHHSHNVGNFGGFFTFWDRVCGTDAAYRRFLEKKKQR 221
BLAST of NO04G02040 vs. NCBI_GenBank
Match: XP_009824728.1 (hypothetical protein H257_02682 [Aphanomyces astaci] >ETV86256.1 hypothetical protein H257_02682 [Aphanomyces astaci]) HSP 1 Score: 160.6 bits (405), Expect = 8.400e-36 Identity = 92/261 (35.25%), Postives = 141/261 (54.02%), Query Frame = 0 Query: 33 VAWVDTHWLTFTEMIT-WSDATIFAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQTAEPFDKALFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKVRAPLPSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPILSPFSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTDKAYRMFAAKEK 293 +A+++ +W MIT +S TI +V T+ +H+ + + L Y L +Y+IQ A+P A +HL++ +V + P++L G G PLP+ + I ++ ++ + FYW HRL HH+ YK HK HH + + EYAHP+E ++ V TF GPLLL H+L W + A RL+ET D HSGY +P + + +P+W GP HDFHH G + ++ WD+V GTD A+R A + Sbjct: 28 LAFLEPYW---QHMITSYSPFTIVSVFTFVLHEALYFSIWLPYLALDFVPYFRKYKIQEAKPNTWAETWRCFKHLVFSHVVVQLPMILSSDWGLRQLGFTFELPLPTASTIAWQCLVSFILEDFYFYWVHRLMHHKSVYKYVHKVHHEYAAPFGIAAEYAHPIETMLLGV-GTFLGPLLLTRHLLTLWVWLAVRLFETIDDHSGYELP-WAWSNFLPFWAGPVHHDFHHEKFDGNYASVFTVWDYVFGTDGAFRQSQADRR 283
BLAST of NO04G02040 vs. NCBI_GenBank
Match: XP_013760480.1 (C-4 sterol methyl oxidase [Thecamonas trahens ATCC 50062] >KNC46718.1 C-4 sterol methyl oxidase [Thecamonas trahens ATCC 50062]) HSP 1 Score: 158.7 bits (400), Expect = 3.200e-35 Identity = 85/234 (36.32%), Postives = 128/234 (54.70%), Query Frame = 0 Query: 55 FAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQTAEPFDKALFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKV-RAPLPSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPILSP------FSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTD 282 F VG +H+++ S + + GLL RYRIQ P ++L + L+ L+ + + ++Y F G A +PS + + C++ ET FYW+HR H W +K H +HH F +++ + EYAHP E L+SN L T GGPLLLG+H+ + + + A R++ T D H G+ +P SP V P+ + P H+FHHSHN G +G + FWDW+ GTD Sbjct: 3 FVVGFMTVHELVFVGLSGAIAAVGAAGLLERYRIQQRTP-SRSLVVACIKSLLVGHLIVQPLQLFLLYPVFVALGMSADPADMPSAAVAIAQLLACFVINETGFYWSHRWLHSEWLFKTVHARHHKFGSTIGIAAEYAHPFEQLVSNGLPTIGGPLLLGTHMSITFLWLAIRIYLTVDNHCGFALP-WSPAHWGGAAKVNPFASHPLAHNFHHSHNSGCYGGNSFFWDWIMGTD 234
BLAST of NO04G02040 vs. NCBI_GenBank
Match: OQR86149.1 (hypothetical protein ACHHYP_10941 [Achlya hypogyna]) HSP 1 Score: 158.7 bits (400), Expect = 3.200e-35 Identity = 90/263 (34.22%), Postives = 141/263 (53.61%), Query Frame = 0 Query: 33 VAWVDTHWLTFTEMITWSDATIFAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQTAEPFDKALFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKVRAPLPSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPI-LSPFSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTDKAYRMFAAKEKER 295 +A+++ +W + +S+ I +V T+ +H+ + + Y LL + +Y+IQ A+P + + L++ + + P++L G G PLP T I ++ ++ + FYW HR H + YK HK HH + + EYAHP+E + + TF GPLLL H+L W + A RL+ET D HSGY +P LS + +P+W GP HDFHH G + ++ WDWV GTDKA+R AA+E++R Sbjct: 28 LAFLEPYWQAMLD--NYSEFVIVSVFTFILHEALYFGLWIPYLLLDYIPYMAKYKIQAAKPNNWTDTSRCLKGLLFNHVFIQLPMILCSDYGLRLLGFSAAMPLPKATTIAWQCLVSFILEDFYFYWIHRFLHWKKIYKYVHKVHHEYAAPFGIAAEYAHPIETMFLGI-GTFLGPLLLTRHLLTLWVWLAVRLYETVDDHSGYELPFALSAY--IPFWGGPVHHDFHHEKFDGNYSSVFTVWDWVFGTDKAFR--AAQEEKR 283
BLAST of NO04G02040 vs. NCBI_GenBank
Match: XP_008863720.1 (hypothetical protein H310_02097 [Aphanomyces invadans] >ETW07627.1 hypothetical protein H310_02097 [Aphanomyces invadans]) HSP 1 Score: 158.3 bits (399), Expect = 4.200e-35 Identity = 90/260 (34.62%), Postives = 137/260 (52.69%), Query Frame = 0 Query: 33 VAWVDTHWLTFTEMITWSDATIFAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQTAEPFDKALFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKVRAPLPSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPILSPFSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTDKAYRMFAAKEK 293 +A+V+ +W + T+S TI ++ T+ +H+ + T + Y L +Y+IQ +P +HLI+ +V + P++L G G PLP+ T I + ++ + FYW HRL HH+ YK HK HH + + EYAHP+E ++ V TF GPLLL H+L W + A RL+ET D HSGY +P + + +P+W GP HDFHH G + ++ WD+V GTD A+R A + Sbjct: 28 LAFVEPYWQHM--ITTYSPFTIVSIFTFVLHEALYFTIWVPYLALDFIPYFRKYKIQENKPNTWNETWRCVKHLIFSHVVIQLPMILCSDWGLRQLGFTFDLPLPAATTIAWQCFVSFILEDFYFYWVHRLLHHKSIYKYVHKIHHEYAAPFGIAAEYAHPIETMLLGV-GTFLGPLLLTRHLLTLWVWLAVRLFETIDDHSGYELP-WAWSNFLPFWAGPVHHDFHHEKFDGNYASVFTVWDYVFGTDGAFRQSQADRR 283
BLAST of NO04G02040 vs. NCBI_GenBank
Match: XP_004352512.1 (4alpha-methyl-sterol C4-methyl-oxidase [Acanthamoeba castellanii str. Neff] >ELR23035.1 4alpha-methyl-sterol C4-methyl-oxidase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 157.1 bits (396), Expect = 9.300e-35 Identity = 84/232 (36.21%), Postives = 124/232 (53.45%), Query Frame = 0 Query: 54 IFAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQT---------------AEPFDKA------LFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKVR-APLPSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPILSPFSVMPWWTGPQMHDFHHSHN 264 +FA+GT+ +H+ + L H G L R++IQ PF KA +F L H LV + P + ++Y F Y G + A LP + + L +T FYW HRL H +WFY+ H +HH F + + +E+AHP+E +++N L T G +L+GSH+L FW + R+ ET + HSGY++P LSPFS++P+ G +HDFHHSHN Sbjct: 18 LFALGTFVVHEAAFVPLNAILFLCHHRGWLNRFKIQVGGSPSSTSKASSHSPGHPFPKARLVRECIFSLCVNH-----LVLQIPTLYLVYPAFKYFGMRSDIASLPDAWEMARHIAIFILINDTGFYWMHRLMHTKWFYRSIHARHHRFTAPIGIASEFAHPVEQVLANQLPTILGAMLMGSHLLTFWVWLFLRIVETIEAHSGYSLP-LSPFSLVPFMNGADVHDFHHSHN 243
BLAST of NO04G02040 vs. NCBI_GenBank
Match: XP_012195380.1 (hypothetical protein SPRG_01623 [Saprolegnia parasitica CBS 223.65] >KDO33722.1 hypothetical protein SPRG_01623 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 156.8 bits (395), Expect = 1.200e-34 Identity = 90/265 (33.96%), Postives = 138/265 (52.08%), Query Frame = 0 Query: 33 VAWVDTHWLTFTEMITWSDATIFAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQTAEPFDKALFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKVRAPLPSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPI-LSPFSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTDKAYRMFAAKEKERQG 297 +A++ +W + + +S+ I +V T+ +H+ + L Y L +Y+IQ +P + + L++ + + P++L G G PLP T I ++ +L + FYW HR H + YK HK HH + ++ EYAHP+E + + TF GPLLL H+L W + A RL+ET D HSGY +P LS + +P+W GP HDFHH G + ++ WDWV GTDKA+R A +EK +G Sbjct: 28 LAFLAPYWQSMLD--NYSEFVIVSVFTFILHEALYFGLWLPYLALDYIPYFAKYKIQPTKPNNWVDTSRCLKGLLFNHVFVQLPMILCSDFGLRLLGFSAAMPLPKATTIAWQCLVSFLLEDFYFYWIHRFLHWKKIYKYVHKVHHEYAAPFGISAEYAHPIETMFLGI-GTFLGPLLLTRHLLTLWVWLAVRLYETVDDHSGYELPFALSAY--IPFWGGPVHHDFHHEKFDGNYSSVFTIWDWVFGTDKAFRA-AQREKREKG 286
BLAST of NO04G02040 vs. NCBI_GenBank
Match: CAQ55986.1 (sterol C4 methyloxydase, partial [Aphanomyces euteiches]) HSP 1 Score: 152.9 bits (385), Expect = 1.800e-33 Identity = 89/254 (35.04%), Postives = 135/254 (53.15%), Query Frame = 0 Query: 33 VAWVDTHWLTFTEMIT-WSDATIFAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQTAEPFDKALFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKVRAPLPSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPILSPFSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTDKAYR 286 +A+++ +W MIT +S+ TI ++ T+ +H+ + + + Y LL +Y+IQ ++P +HL++ + +FP++L G G PLP T I + ++ + FYW HR+ HH+ YK HKQHH F + EYAHP+E + L TF GPLLL H+L W + A RL ET D HSGY +P + + +P+W GP HDFHH G + ++ WD V TD A+R Sbjct: 28 LAFLEPYW---QHMITNYSEFTIVSLFTFVLHEALYFSIWIPYLLLDFIPYFRKYKIQQSKPNTWENTWRCLKHLLFNHVFIQFPMILGSDWGLRQLGFTTALPLPHATTIAWQCFMSFILEDFYFYWVHRIMHHKSLYKYVHKQHHEFAAPFGIAAEYAHPVETAVLG-LGTFLGPLLLTRHLLTLWVWLAVRLVETIDDHSGYDLP-WAWSNFVPFWAGPVHHDFHHEKFDGNYASVFTIWDNVFWTDTAFR 276
BLAST of NO04G02040 vs. NCBI_GenBank
Match: OQR83753.1 (hypothetical protein ACHHYP_14339 [Achlya hypogyna]) HSP 1 Score: 152.5 bits (384), Expect = 2.300e-33 Identity = 85/260 (32.69%), Postives = 126/260 (48.46%), Query Frame = 0 Query: 27 DMARPYVAWVDTHWLTFTEMITWSDATIFAVGTYAIHQIIAATFSLFYCLLHSHGLLLRYRIQTAEPFDKALFQLATRHLIWRALVKEFPVMLIMYSGFHYSGTKVRAPLPSITRILGDWMLCWLWTETTFYWTHRLFHHRWFYKRFHKQHHTFKTSVALNTEYAHPLEHLISNVLTTFGGPLLLGSHVLVFWSYFAFRLWETFDGHSGYTIPILSPFSVMPWWTGPQMHDFHHSHNIGAFGTMTCFWDWVCGTDKAYRM 287 D PY A ++ H SD TI+ T A+ + SL + LL + +L +Y+IQ P L+ + + L +++ Y G V PLP + + +++C L + FYW+HR HH+ YK HK HH ++ L Y HP E L++ GPLL+ H+L W + +R+ ET D HSG+ P SP +P+ +G HDFHH FG+ FWDW+CGTD A+R+ Sbjct: 34 DALEPYWALLNAH---------CSDFTIYFWCTCAVSTLALFGGSLAFALLDAIPVLRKYKIQPTRPPTVGLYLRCLKLAVINHLFIHMGLLITNIPLMEYLGIAVSGPLPKPSTLAVQFVVCMLCEDFLFYWSHRFLHHKKIYKYVHKVHHEYQAPFGLTAVYTHPFEELLTTG-AMMAGPLLVCRHMLPIWLWMTYRIIETIDSHSGFDFP-WSPMHAIPFGSGVARHDFHHEKFDSVFGSQFAFWDWLCGTDAAFRV 282 The following BLAST results are available for this feature:
BLAST of NO04G02040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02040 ID=NO04G02040|Name=NO04G02040|organism=Nannochloropsis oceanica|type=gene|length=1798bpback to top protein sequence of NO04G02040.1 >NO04G02040.1-protein ID=NO04G02040.1-protein|Name=NO04G02040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bpback to top Synonyms
Publications
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