NO04G01870, NO04G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01870 vs. NCBI_GenBank
Match: XP_005851476.1 (hypothetical protein CHLNCDRAFT_137846 [Chlorella variabilis] >EFN59374.1 hypothetical protein CHLNCDRAFT_137846 [Chlorella variabilis]) HSP 1 Score: 101.3 bits (251), Expect = 3.900e-18 Identity = 64/169 (37.87%), Postives = 88/169 (52.07%), Query Frame = 0 Query: 45 LLFLALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPT-FKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIE 213 L+ L L+ PH LY + W + K VE +F L+ +K VQ ++ W + P + ++ PL +G +FA GQ LN+G++ A+G GVYYG +LG I W GFPF VV HPQYVG V I G ++ SQA AGL + W+ Y T E Sbjct: 11 LVCLGLALPHFLYAYIWFFPQQWMAAFKKRSVE---VFETLAWALKGVQFLSVAYWWLLRKPAGVDVTAVPPLAWPLGIALFAFGQWLNVGIFQAIGHPGVYYGFKLGHTIPWASGFPFNVVSHPQYVGSVASILGAAVLVWSQA--PAGLGLLVCYWTLLYVATAFQE 174
BLAST of NO04G01870 vs. NCBI_GenBank
Match: PRW58649.1 (phospholipid n-methyltransferase [Chlorella sorokiniana]) HSP 1 Score: 99.0 bits (245), Expect = 1.900e-17 Identity = 62/164 (37.80%), Postives = 80/164 (48.78%), Query Frame = 0 Query: 50 LSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPTFKLESLTPLQAVVGTIMFAA-GQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIE 213 L+ PH+LY + W S+ + K GVEAF ++ L+K VQ A+ W GQ LN+G++ A+G GVYYG +LG I W +GFPF VV HPQYVG V + G ++ SQA AGL I W G Y TG E Sbjct: 15 LAAPHLLYAYIWFFPRSWQAIFKKRGVEAFE---TVAWLLKIVQALAVAYWXXXXXXXXXXXXXXXXXXXXXXXXXXXFGQWLNIGIFQAIGHAGVYYGFKLGHTIPWVDGFPFNVVSHPQYVGSVATVLGAAVLVWSQA--PAGLAAIVLYWVGLYIATGFQE 173
BLAST of NO04G01870 vs. NCBI_GenBank
Match: CEP02882.1 (hypothetical protein PBRA_002849 [Plasmodiophora brassicae]) HSP 1 Score: 98.6 bits (244), Expect = 2.500e-17 Identity = 63/180 (35.00%), Postives = 90/180 (50.00%), Query Frame = 0 Query: 40 DEDLGLLFLALSTPHILYFFTWTCTGSF-TRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPTFKLESLTPL--QAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTV----VPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIE 213 D + S PH Y + W F K A T+F L+ + K +QL ++ W + + P K E +PL + VV + GQ LN +Y A+G +GVYYG+RLG+P+ WY GFPF + +PHPQY+G + I G+ L + L IA + FY IT +IE Sbjct: 3 DASTWVAIAVFSLPHWFYAYVWVRPDLFIAGTKKWAAAHAVTVFASLATMFKVLQLIVILWWAVLHPPVAK-EFPSPLSFRFVVCVLAVILGQILNAAIYWAIGHDGVYYGIRLGRPVPWYTGFPFHLFGVKIPHPQYLGSSMTICGLAG--LFYTSTTTYLPVIAAFSTVFYVITAIIE 179
BLAST of NO04G01870 vs. NCBI_GenBank
Match: OLQ06672.1 (Solute carrier family 35 member F3 [Symbiodinium microadriaticum]) HSP 1 Score: 97.1 bits (240), Expect = 7.300e-17 Identity = 71/223 (31.84%), Postives = 108/223 (48.43%), Query Frame = 0 Query: 5 WPPLLWLVLS-LCSQYRHYPHRRRQAQMAIAPAFPFDEDL-----GLLFLALSTPHILYFFTWTCTGSFTRVA-----KTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPTFKLESLTPLQA---VVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPF-TVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIE 213 W LL + L S +P R Q+ AF + L L L +ST ++++ F W + F + K +G +F L V+ K VQ G++ M+ + + E+ A V + AAGQALN YNA+G GVYYG +LG+ + W GFPF T + HPQY+G VL ++G + V++++ GL + VW YG+ +E Sbjct: 339 WRRLLHMAFEVLLSGAACFPAALRSRQLDTLDAFGSGDCLRSASWWLCLLGVSTNYLMHGFIWNYSKRFAALCDKPPLKLLGSHPVDVFASLEVVAKLVQAGSVGMFLGPSGRSALWEAARTAPAWCWAVFAGLLAAGQALNAATYNAIGNAGVYYGFKLGRTVPWCHGFPFNTGLRHPQYLGVVLTLFGALPVVVTRELTQLGLPHLVLVWGSMYGVMSAME 561
BLAST of NO04G01870 vs. NCBI_GenBank
Match: XP_005785041.1 (hypothetical protein EMIHUDRAFT_467948, partial [Emiliania huxleyi CCMP1516] >EOD32612.1 hypothetical protein EMIHUDRAFT_467948, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 95.1 bits (235), Expect = 2.800e-16 Identity = 67/205 (32.68%), Postives = 96/205 (46.83%), Query Frame = 0 Query: 29 AQMAIAPAFPFDEDLGLLFLALSTPHILYFFTWTCTGSFTRVAK-----TVGVEAFTLFYKLSVLIKFVQLGALIMWGM------KNLPTFKLESLTPLQA---------VVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTV-VPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIE 213 A + +AP F L L++S+ +I+Y W F + +GV+A +F L + K Q AL++W + P + +L L A V ++ AGQ LN G+Y A+G++GVYYG +LG P+ W GFPF + HPQYVG L + V L S A AGLL + WS Y +E Sbjct: 31 ASLTVAPTPAF----VLTALSVSSSYIVYSLVWFNAAKFAAACQRAPLGLLGVDAVGVFQTLVLAFKLGQQLALLLWAAHAAGADASSPHAVVHALATLLASFCADPGRLAVAAVLMGAGQTLNAGIYAAIGRDGVYYGFKLGAPVPWCSGFPFNLGFRHPQYVGGTLSQYAVFLALSSPATCRAGLLPLLAWWSVNYAAMSWVE 231
BLAST of NO04G01870 vs. NCBI_GenBank
Match: XP_005647515.1 (hypothetical protein COCSUDRAFT_63364 [Coccomyxa subellipsoidea C-169] >EIE22971.1 hypothetical protein COCSUDRAFT_63364 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 93.2 bits (230), Expect = 1.100e-15 Identity = 49/131 (37.40%), Postives = 71/131 (54.20%), Query Frame = 0 Query: 89 IKFVQLGALIMWGM-----KNLPTFKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIEHY 215 ++ +Q G+++ W + + L L P ++F GQ LN+ VYN L GVYYG +LGK +AW GFPF V HPQY+G VL +WGV ++L + GLL +A W+ Y +T E + Sbjct: 1 MRLLQFGSIVAWYVVKSKEQGLKLDLLNVTWPQWTAFFALVF-IGQVLNISVYNTLSTNGVYYGTKLGKKVAWVRGFPFNTVSHPQYLGAVLTVWGVASLLWDVS--PPGLLILAGYWTALYAMTAFWEQF 128
BLAST of NO04G01870 vs. NCBI_GenBank
Match: XP_014160854.1 (hypothetical protein SARC_00903 [Sphaeroforma arctica JP610] >KNC86952.1 hypothetical protein SARC_00903 [Sphaeroforma arctica JP610]) HSP 1 Score: 92.8 bits (229), Expect = 1.400e-15 Identity = 57/179 (31.84%), Postives = 84/179 (46.93%), Query Frame = 0 Query: 42 DLGLLFLALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPTFK---LESLTPLQAVVGTIMFAA---GQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGL--LTIATVWSGFYGITGLIE 213 D LL LS PH++Y W F + + + E + + +K Q A ++W + L + S L V + F+ GQ LN Y L ++GVYYG +LGK I W GFPF HPQY+GCV IWG ++L + + L+I T W+ Y + ++E Sbjct: 17 DTVLLGAVLSLPHVVYRDIWQNPQPFIKKCEKIKKEPVKVMATIGYTLKTAQYLACLLWSYRTLSDENGNFVMSFQDLPRGVTALAFSLILFGQVLNFSTYKTLKQDGVYYGAKLGKNIPWVHGFPFNTFNHPQYLGCVCSIWGATLLVLCTVHFYRWMHVLSIGTWWTMLYLFSSIVE 195
BLAST of NO04G01870 vs. NCBI_GenBank
Match: PSC68901.1 (Amino acid kinase family isoform 1 [Micractinium conductrix]) HSP 1 Score: 91.7 bits (226), Expect = 3.100e-15 Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 0 Query: 75 GVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPT-FKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIEHYF 216 G +F L+ L+K Q A+ W + P+ ++ P ++ GQ LN+ ++ A+G GVYYG LG I W+ GFPF V PHPQYVG V + G A++ SQA V G+L T W+ Y +TG+ E F Sbjct: 268 GKNGCRVFEGLAWLLKVFQALAVAYWWLLRRPSGIDFGAVPPTAWAAAALLGGIGQLLNVSIFRAIGHPGVYYGFILGHEIPWHTGFPFNVCPHPQYVGSVATVLGGAALVWSQAPVGLGML--VTYWTLLYVLTGIQEDCF 407
BLAST of NO04G01870 vs. NCBI_GenBank
Match: WP_077730056.1 (hypothetical protein [Methylocaldum sp. 14B]) HSP 1 Score: 87.4 bits (215), Expect = 5.800e-14 Identity = 52/144 (36.11%), Postives = 72/144 (50.00%), Query Frame = 0 Query: 48 LALSTPHILYFFTWTCTGSFTRVAKTVGV----EAFTLFYKLSVLIKFVQLGALIMWGM---KNLPTFKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVL 185 L LS I Y + W +F V K + E ++ KL + K +Q+G + W M L SL P+ +G I+ GQ N GV+ LG+ GV+YG + G I W FPF+V+ HPQYVG +L IWG V+ Sbjct: 11 LLLSIERITYLWIWHHPDTFKAVCKYPAIVRFGEPISVLEKLFYIFKILQIGIFLAWCMLLGNTLIPLPTSSLVPMSLGIGLIVI--GQVFNFGVFYRLGRSGVFYGNKFGYEIQWCNAFPFSVLSHPQYVGTLLSIWGFFLVM 152
BLAST of NO04G01870 vs. NCBI_GenBank
Match: WP_086134630.1 (hypothetical protein [Methylocaldum sp. SAD2]) HSP 1 Score: 86.3 bits (212), Expect = 1.300e-13 Identity = 52/144 (36.11%), Postives = 71/144 (49.31%), Query Frame = 0 Query: 48 LALSTPHILYFFTWTCTGSFTRVAKTVGV----EAFTLFYKLSVLIKFVQLGALIMWGM---KNLPTFKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVL 185 L LS I Y + W +F V K + E + KL + K +Q+G + W M L SL P+ +G I+ GQ N GV+ LG+ GV+YG + G I W FPF+V+ HPQYVG +L IWG V+ Sbjct: 11 LLLSIERITYLWIWHHPDTFKAVCKYPAIVRFGEPISALEKLFYIFKILQIGIFLAWCMLLGNTLIPLPTSSLVPMSLGIGLIVI--GQVFNFGVFYRLGRSGVFYGNKFGYEIQWCNAFPFSVLNHPQYVGTLLSIWGFFLVM 152 The following BLAST results are available for this feature:
BLAST of NO04G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01870 ID=NO04G01870|Name=NO04G01870|organism=Nannochloropsis oceanica|type=gene|length=2524bpback to top protein sequence of NO04G01870.1 >NO04G01870.1-protein ID=NO04G01870.1-protein|Name=NO04G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=216bpback to top Synonyms
Publications
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