NO04G01870, NO04G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01870 vs. NCBI_GenBank
Match: EWM28603.1 (phospholipid n-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 307.0 bits (785), Expect = 4.700e-80 Identity = 147/185 (79.46%), Postives = 163/185 (88.11%), Query Frame = 0 Query: 31 MAIAPAFPFDEDLGLLFLALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPTFKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIEHYF 216 M I+ AFP +E LGLL LALSTPH+LYFFTWTCTG+FTR+AK VGVEAF LFYKLSVL+KFVQLGAL+ WGM+ +P K+ S+ PLQ VVG MF AGQ LNMGVY ALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLL+QAN+DAGLLTIA+ WS FY +TGLIEH+F Sbjct: 11 MGISLAFPVNEGLGLLLLALSTPHLLYFFTWTCTGAFTRIAKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEHHF 195
BLAST of NO04G01870 vs. NCBI_GenBank
Match: GBG30815.1 (Phosphatidyl-N-methylethanolamine N-methyltransferase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 126.3 bits (316), Expect = 1.100e-25 Identity = 71/180 (39.44%), Postives = 100/180 (55.56%), Query Frame = 0 Query: 49 ALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMW--------GMKNLPTFKLESLTPL------QAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIEHY 215 ALSTPH+ YF WT F R+ K +G E F +F ++ IK Q AL +W NL E+LT L Q ++ +F GQ N GVY ++G+ GVYYG RLG+ + W GFPF+VVPHPQY+G + IWG V + + A+V AG+ I + + FY + ++E + Sbjct: 103 ALSTPHVFYFIVWTNASIFYRLVKPIG-EPFQVFALMAHGIKAFQACALAVWYFGLDYWLSTDNLVELPHEALTFLGSRSTAQLILAGELFMLGQLFNGGVYQSIGEAGVYYGCRLGQTVPWVFGFPFSVVPHPQYLGATVSIWGGVLLCATSASVSAGIYAIGVIMTVFYFFSSMVEQH 281
BLAST of NO04G01870 vs. NCBI_GenBank
Match: BBC28426.1 (phospholipid-N-methyltransferase [Chlamydomonas debaryana]) HSP 1 Score: 125.2 bits (313), Expect = 2.500e-25 Identity = 69/175 (39.43%), Postives = 94/175 (53.71%), Query Frame = 0 Query: 43 LGLLFLALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPT---FKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIEHY 215 LG+L +S PH+LY + WT + R G + F VL K +Q + +W N + F+ + L Q V ++ GQALN G Y ALG GVYYG RLGKPI W G+PF V HPQYVGC+L +WG +A++L + + IA WSG Y + +EH+ Sbjct: 24 LGVLLFVISLPHLLYAYVWTNPTVWLRF---WGKRSVDTFATAGVLGKVLQYAGMFVWLWSNQDSGVCFR-QPLALWQLAVAAVLIGYGQALNFGTYKALGTAGVYYGCRLGKPIPWVHGWPFDTVAHPQYVGCILSVWGALALMLHAVPLPTAAI-IAVFWSGMYCFSAAVEHW 193
BLAST of NO04G01870 vs. NCBI_GenBank
Match: BBC28424.1 (phospholipid-N-methyltransferase [Chlamydomonas applanata]) HSP 1 Score: 124.0 bits (310), Expect = 5.600e-25 Identity = 75/201 (37.31%), Postives = 105/201 (52.24%), Query Frame = 0 Query: 23 PHRRRQAQMAIAPAFPFDE-DLGLLFLALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPT---FKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDA----GLLTIATVWSGFYGITGLIEHYF 216 P R Q P P++ +L AL++PH LY F W ++ R V+AF V+ K VQ A+ +W + P L ++T Q + ++ A GQALN G+Y+A+G GVYYG +LGK I W+ GFPF VV HPQYVG L +W VL Q + ++ +AT W+G Y +TG+ E YF Sbjct: 4 PSRAVVPQALCRPMMPYESFHDWVLVAALASPHFLYAFIWFFPKTWQRAFGKGAVDAFAF---SGVVGKLVQFQAVALWFWISQPNGLCLDLSAITLTQWLGFLLLGAVGQALNAGIYHAIGTAGVYYGFKLGKKIPWHSGFPFNVVSHPQYVGSALTVWAFAIVLAGQVKAASLAANPVVWVATYWTGLYIVTGIQEQYF 201
BLAST of NO04G01870 vs. NCBI_GenBank
Match: XP_011400892.1 (hypothetical protein F751_5940 [Auxenochlorella protothecoides] >KFM27902.1 hypothetical protein F751_5940 [Auxenochlorella protothecoides]) HSP 1 Score: 123.6 bits (309), Expect = 7.300e-25 Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 0 Query: 50 LSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMW-GMKNLPTFKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIEHYF 216 L+ PH+LY + W + ++ KT G ++ F + L+K +Q ++I W +K L S++P A + ++ AAGQALN+G+Y A+G GVYYG +LG + W EGFPF VV HPQYVG VL +W A +L A AGL + W+G Y IT + E F Sbjct: 18 LALPHLLYAYIWFNSSTW---LKTFGKKSVQRFETAAWLLKVLQFSSVIYWYSVKKPEGVILGSISPFAAGISLVLLAAGQALNIGIYRAIGHAGVYYGFKLGHKVPWVEGFPFNVVSHPQYVGSVLSVW--AAAILVWAQGPAGLGLLVAYWTGLYVITAIQESCF 179
BLAST of NO04G01870 vs. NCBI_GenBank
Match: PNH02299.1 (hypothetical protein TSOC_011728 [Tetrabaena socialis]) HSP 1 Score: 116.7 bits (291), Expect = 8.900e-23 Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 0 Query: 55 ILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPT--FKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLT-IATVWSGFYGITGLIEHY 215 +LY F WT + R+ G A F + K +Q ++W PT + LTP Q +VG + A GQALN+GVY ALG GVYYG RLG + W G+PF+ V HPQY G VL +WGV +LL + A + T +A W+G Y ++GL+E+Y Sbjct: 1 MLYAFVWTNPKPWLRL---FGQRAVQAFAACGFVGKVLQFSTCLLWAWAMQPTGLCLRQPLTPAQLLVGGFLVAYGQALNLGVYRALGTRGVYYGCRLGHSVPWVSGWPFSAVRHPQYTGSVLSVWGV--LLLLWGALPAAMATGVAVFWTGLYVLSGLVENY 158
BLAST of NO04G01870 vs. NCBI_GenBank
Match: XP_013902006.1 (hypothetical protein MNEG_4975 [Monoraphidium neglectum] >KIZ02987.1 hypothetical protein MNEG_4975 [Monoraphidium neglectum]) HSP 1 Score: 113.6 bits (283), Expect = 7.600e-22 Identity = 66/168 (39.29%), Postives = 92/168 (54.76%), Query Frame = 0 Query: 49 ALSTPHILYFFTWTCTGSFTRV-AKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPT---FKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIE 213 AL+ PH LY F W + R+ T V+AF F L +++F +G +W LP L ++ LQ + +F GQ+LN G++ A+G GVYYG +LG + W +G+PF V HPQYVG VL +W +VA+L Q LL +A W+ Y ITGL E Sbjct: 30 ALAAPHFLYAFIWFKPDRWQRLFCGTKAVDAFAFFGALGKVLQFTVVG---LWLSCQLPAGLCLDLRAVGLLQWLAALALFGYGQSLNAGIFRAIGHVGVYYGFKLGHEVPWVKGWPFDTVSHPQYVGSVLSVWAIVALLWGQV-ASPALLVLAGYWTTLYVITGLQE 193
BLAST of NO04G01870 vs. NCBI_GenBank
Match: BBC28425.1 (phospholipid-N-methyltransferase [Chlamydomonas asymmetrica]) HSP 1 Score: 106.7 bits (265), Expect = 9.200e-20 Identity = 63/180 (35.00%), Postives = 95/180 (52.78%), Query Frame = 0 Query: 36 AFPFDEDLGLLFLALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMW---GMKNLPTFKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIE 213 A P + + LLF L+ PH LY F W ++T + V AF + L K +Q GA+++W + F L+ ++ Q + ++ A GQ LN+G++ A+G GVYYG +LG + W EG+PF VVPHPQYVG V IW ++L Q + G + W Y ++ + E Sbjct: 12 AVPQELAMRLLFPLLALPHFLYAFIWFNPKAWTSMFGKRSVGAFAV---CGALGKVIQFGAVVLWLWSARASGLCFDLKQISLPQFLGAVLLGAFGQQLNIGIFKAIGTAGVYYGFKLGAKVPWVEGYPFNVVPHPQYVGSVATIWAAAILVLGQ--LPHGWWVVPAFWMCLYIVSAVQE 186
BLAST of NO04G01870 vs. NCBI_GenBank
Match: BBC28427.1 (phospholipid-N-methyltransferase [Chlamydomonas sphaeroides]) HSP 1 Score: 102.8 bits (255), Expect = 1.300e-18 Identity = 66/175 (37.71%), Postives = 91/175 (52.00%), Query Frame = 0 Query: 46 LFLALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKN---LPTFKLESLTPLQAVVGTIMFAA-GQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIW--GVVAVLLSQANVDAGLLTIATVWSGFYGITGLIEHY 215 L ++ PH+LY F WT ++ R+ + V+AF L++F + + MW ++ PT PL ++ + GQALNMGVY LG GVYYG RLG+ + W G+PFT PHPQYVG +W G+VAV A IA WS Y ++ +IEHY Sbjct: 24 LLAVIALPHLLYAFVWTRPHAWKRMFGSRSVDAFASAGYAGKLLQFAAV-FIWMWAGQSAGLCPT----RFPPLYLLLPALALGCWGQALNMGVYATLGTAGVYYGSRLGRNVPWVTGWPFTATPHPQYVGSAASVWASGMVAVGCGLA-PPLATFGIAVYWSAMYALSAVIEHY 192
BLAST of NO04G01870 vs. NCBI_GenBank
Match: KXZ42553.1 (hypothetical protein GPECTOR_136g636 [Gonium pectorale]) HSP 1 Score: 102.4 bits (254), Expect = 1.700e-18 Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = 0 Query: 35 PAFPFDEDLGLLFLALSTPHILYFFTWTCTGSFTRVAKTVGVEAFTLFYKLSVLIKFVQLGALIMWGMKNLPT---FKLESLTPLQAVVGTIMFAAGQALNMGVYNALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLSQANVDAGLLTIATVWSGFYGITGLIE 213 P+ P LF+ ++ PH++Y W + T G + LF + + K +Q +++W + PT F+ + L Q ++ + GQALN+G Y ALG GVYYG RLG+ + W +G+PF + HPQYVG + IWG +A+ + A + I W+ Y ++G IE Sbjct: 19 PSSPLYSTPAFLFV-IALPHLIYALVWLSPKVWW---GTFGKNSLPLFASVGIFGKVLQFSTMVLWLWSSQPTGLCFR-QPLALWQVLLAAALIGYGQALNLGTYRALGLAGVYYGCRLGRSVPWVKGWPFNAISHPQYVGSTMTIWGALALFHTAAPMPLSFF-IGIYWTCMYIMSGYIE 193 The following BLAST results are available for this feature:
BLAST of NO04G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01870 ID=NO04G01870|Name=NO04G01870|organism=Nannochloropsis oceanica|type=gene|length=2524bpback to top protein sequence of NO04G01870.1 >NO04G01870.1-protein ID=NO04G01870.1-protein|Name=NO04G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=216bpback to top Synonyms
Publications
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