NO04G01440, NO04G01440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01440 vs. NCBI_GenBank
Match: EWM28620.1 (histone-like transcription factor family protein [Nannochloropsis gaditana]) HSP 1 Score: 174.5 bits (441), Expect = 2.900e-40 Identity = 88/110 (80.00%), Postives = 101/110 (91.82%), Query Frame = 0 Query: 64 APIPSKKPRNAPAPPISATSEYVTEETTFLIPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVVPQIP 174 AP+ SKK RNAP PP+S ++ YVTE+TT IP+ASIKRIMKLDPD+KQLSQDAIM+MAKATELF+DKLAKASH+MAV+NKRKTIKYEDIADAR S K++EFLDGVVPQIP Sbjct: 90 APVSSKKARNAPIPPLSTSNAYVTEDTTLAIPRASIKRIMKLDPDTKQLSQDAIMVMAKATELFIDKLAKASHSMAVTNKRKTIKYEDIADARFSQKNMEFLDGVVPQIP 199
BLAST of NO04G01440 vs. NCBI_GenBank
Match: XP_009036970.1 (hypothetical protein AURANDRAFT_17325, partial [Aureococcus anophagefferens] >EGB08239.1 hypothetical protein AURANDRAFT_17325, partial [Aureococcus anophagefferens]) HSP 1 Score: 84.0 bits (206), Expect = 5.200e-13 Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 0 Query: 91 TFLIPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVVP 171 + LIPKA++KRIMKLDP+ Q++ DA++L+AKATE+F++K + + A A R T+KYEDIAD K+ EFL V+P Sbjct: 1 SLLIPKAAVKRIMKLDPEVNQVANDAVILVAKATEMFLEKFSAEARAQATLRSRTTVKYEDIADTVSGDKNYEFLATVIP 80
BLAST of NO04G01440 vs. NCBI_GenBank
Match: CDJ96319.1 (Transcription factor CBF NF-Y archaeal histone domain containing protein [Haemonchus contortus]) HSP 1 Score: 73.2 bits (178), Expect = 9.100e-10 Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 73 NAPAPPISATSEYVTEETTFLIPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVVPQIP 174 ++ A IS V E +P + +K+I +LDPD + DA++ + KATELFV +LAKAS+ AV KRKTI+ +DI A S EFLDG + P Sbjct: 2 SSEADTISQEHVQVAELLNCTLPTSRVKKICRLDPDLSMIGSDAVLFITKATELFVAELAKASYTQAVLEKRKTIQTKDIDRAIASKAIYEFLDGALTDWP 102
BLAST of NO04G01440 vs. NCBI_GenBank
Match: XP_017466633.1 (PREDICTED: DNA polymerase epsilon subunit 4 [Rhagoletis zephyria]) HSP 1 Score: 72.8 bits (177), Expect = 1.200e-9 Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 0 Query: 78 PISATSEYVTEETTFLIPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVV 170 PI+ T V E+ F +P+ IK +MKLDPD S +A+ ++ +ATELF++ LA + + +K+KT++ D+ A SV SL FLDG + Sbjct: 56 PIATTENDVPEQRLFQLPQTRIKNLMKLDPDMNLASAEAVFVVTRATELFIESLASEAFSYTTQSKKKTVQKRDVDLAISSVDSLMFLDGAM 147
BLAST of NO04G01440 vs. NCBI_GenBank
Match: XP_014281795.1 (DNA polymerase epsilon subunit C-like [Halyomorpha halys]) HSP 1 Score: 72.4 bits (176), Expect = 1.600e-9 Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 0 Query: 66 IPSKKPRNAPAPPISATSEYVTEETTFLIPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVV 170 IP KKP P S+ E T +P A +K+I+K+DPD DA+ L+AKATELF++ L+K ++A S K+KTI+ +D+ A + +L FLDG + Sbjct: 65 IPDKKPALLP-DKTSSKKEETTRYRPLHLPLARVKQIIKMDPDVHMAGSDAVFLIAKATELFIELLSKDAYAFTSSAKKKTIQKKDVDSAITNADALVFLDGAL 167
BLAST of NO04G01440 vs. NCBI_GenBank
Match: XP_644985.1 (hypothetical protein DDB_G0272740 [Dictyostelium discoideum AX4] >EAL71007.1 hypothetical protein DDB_G0272740 [Dictyostelium discoideum AX4]) HSP 1 Score: 70.1 bits (170), Expect = 7.700e-9 Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0 Query: 94 IPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVVPQ 172 +P A IKRIM+ D D K +S DA+ML+AK+TE+F+D L K A S K+KT++Y+D+A V +L+FL ++P+ Sbjct: 79 LPVARIKRIMRCDKDVKIISSDAVMLVAKSTEMFLDYLVK--EAYKSSGKKKTLQYKDLASTIKGVDNLDFLSEIIPE 154
BLAST of NO04G01440 vs. NCBI_GenBank
Match: KIH50123.1 (hypothetical protein ANCDUO_19802 [Ancylostoma duodenale]) HSP 1 Score: 69.7 bits (169), Expect = 1.000e-8 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 94 IPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVVPQIP 174 +P + +K+I +LDPD + DA++ + KATELF+ +LAKAS+ AV KRKTI+ +DI A S EFLD + P Sbjct: 21 LPTSRVKKICRLDPDLTMIGSDAVLFVTKATELFLTELAKASYTQAVLEKRKTIQAKDIEKAIASKHMFEFLDDALNDWP 100
BLAST of NO04G01440 vs. NCBI_GenBank
Match: KYR01087.1 (putative histone-like transcription factor [Tieghemostelium lacteum]) HSP 1 Score: 69.7 bits (169), Expect = 1.000e-8 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0 Query: 90 TTFLIPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVVPQ 172 T +P A +KRIMK D D K +SQDA L+ K+TELF++ L K + V+ KRKT+ Y+DI+ LEFL ++P+ Sbjct: 75 TVTQLPIARVKRIMKSDKDVKLISQDATFLVTKSTELFLEYLVKEAFKKTVAEKRKTLSYKDISTTVKDTDPLEFLADIIPE 156
BLAST of NO04G01440 vs. NCBI_GenBank
Match: PTY14204.1 (hypothetical protein OFAS_OFAS004733 [Oncopeltus fasciatus]) HSP 1 Score: 69.7 bits (169), Expect = 1.000e-8 Identity = 36/92 (39.13%), Postives = 59/92 (64.13%), Query Frame = 0 Query: 78 PISATSEYVTEETTFLIPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVV 170 P + E + +P A IK+I+K+DPD DA+ L+AKATE+F++ L+K ++A+ S+K+KTI+ +D+ A L+ +L FLDG + Sbjct: 71 PKKSKKEETSRYRPLNLPLARIKQIIKMDPDVNLAGSDAVFLIAKATEMFIELLSKDAYAITASSKKKTIQKKDVDTAILNTDALIFLDGAM 162
BLAST of NO04G01440 vs. NCBI_GenBank
Match: EYC29042.1 (hypothetical protein Y032_0007g3556 [Ancylostoma ceylanicum]) HSP 1 Score: 69.3 bits (168), Expect = 1.300e-8 Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 94 IPKASIKRIMKLDPDSKQLSQDAIMLMAKATELFVDKLAKASHAMAVSNKRKTIKYEDIADARLSVKSLEFLDGVVPQIP 174 +P + +K+I +LDPD + DA++ + KATELF+ +LAKAS+ AV KRKTI+ +D+ A S EFLD + P Sbjct: 21 LPTSRVKKICRLDPDLTMIGSDAVLFVTKATELFLTELAKASYTQAVLEKRKTIQTKDVEKAIASKHMFEFLDDALNDWP 100 The following BLAST results are available for this feature:
BLAST of NO04G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01440 ID=NO04G01440|Name=NO04G01440|organism=Nannochloropsis oceanica|type=gene|length=931bpback to top protein sequence of NO04G01440.1 >NO04G01440.1-protein ID=NO04G01440.1-protein|Name=NO04G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=174bpback to top Synonyms
Publications
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