NO04G01210, NO04G01210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01210 vs. NCBI_GenBank
Match: XP_008908534.1 (hypothetical protein PPTG_13856 [Phytophthora parasitica INRA-310] >ETK82725.1 hypothetical protein L915_11962 [Phytophthora parasitica] >ETN06032.1 hypothetical protein PPTG_13856 [Phytophthora parasitica INRA-310]) HSP 1 Score: 163.3 bits (412), Expect = 1.100e-36 Identity = 107/236 (45.34%), Postives = 142/236 (60.17%), Query Frame = 0 Query: 14 VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 +KSR++AR++ T FH++ + L+++ SL ++K+ E+ LE LGGR AYQ AS LS SFH TSKWV +L L PK +Q LR+LEVGAI T LL CP L+ AIDL SRH RI Q+DFF+ L P F V+VSSMV+N +P RG LR +L+ G LFLMLP CL HS+ +T A+F +L E +GFR+ E + +PKVA+ L Sbjct: 38 MKSRRKARQVTTNFHRLTHELDRLKQHKSLDESQKQRI-AEINRQLEELGGRQAYQDASILSTSFHRTSKWVF-QLLTRFELRPK---------------AKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFS--LKPEGEFQVVVSSMVLNCVPGADKRGEMLRLYREHLK-EGGLLFLMLPLLCLRHSQFMTYARFAKIL-EAVGFRVRETKDSPKVAFLCL 252
BLAST of NO04G01210 vs. NCBI_GenBank
Match: KUF89818.1 (25S rRNA adenine-N(1) methyltransferase [Phytophthora nicotianae]) HSP 1 Score: 163.3 bits (412), Expect = 1.100e-36 Identity = 107/236 (45.34%), Postives = 142/236 (60.17%), Query Frame = 0 Query: 14 VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 +KSR++AR++ T FH++ + L+++ SL ++K+ E+ LE LGGR AYQ AS LS SFH TSKWV +L L PK +Q LR+LEVGAI T LL CP L+ AIDL SRH RI Q+DFF+ L P F V+VSSMV+N +P RG LR +L+ G LFLMLP CL HS+ +T A+F +L E +GFR+ E + +PKVA+ L Sbjct: 38 MKSRRKARQVTTNFHRLTHELDRLKQHKSLDESQKQRI-AEINRQLEELGGRQAYQDASILSTSFHRTSKWVF-QLLTRFKLRPK---------------AKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFS--LKPEGEFQVVVSSMVLNCVPGADKRGEMLRLYREHLK-EGGLLFLMLPLLCLRHSQFMTYARFAKIL-EAVGFRVRETKDSPKVAFLCL 252
BLAST of NO04G01210 vs. NCBI_GenBank
Match: XP_002998696.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY70049.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 162.2 bits (409), Expect = 2.500e-36 Identity = 105/236 (44.49%), Postives = 141/236 (59.75%), Query Frame = 0 Query: 14 VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 +KSR++AR++ T FH++ + L++ S ++ E++ LE LGGR AYQ AS LS SFH TSKWV +L L PK +Q LR+LEVGAI T LL CP ++ AIDL SRH RI Q+DFF+ L P+ F V+VSSMV+N +P RG LR +L+ G LFLMLP CL HS+ +T A+F +L E +GFR+ E + +PKVA+F L Sbjct: 80 MKSRRKARQVTTNFHRLTHELDHLKQQKSADADAQKLRVAEIKRQLEELGGRQAYQDASILSTSFHRTSKWVF-QLLTRFELRPK---------------AKQPPLRVLEVGAINTQLLSCPWMDVRAIDLNSRHERIEQRDFFS--LKPAGEFQVLVSSMVLNCVPGADKRGEMLRLYREHLK-EGGLLFLMLPLLCLRHSQFMTYARFTKIL-EAVGFRVRETKDSPKVAFFCL 295
BLAST of NO04G01210 vs. NCBI_GenBank
Match: GAX95737.1 (Hypothetical protein PINS_003617 [Pythium insidiosum]) HSP 1 Score: 162.2 bits (409), Expect = 2.500e-36 Identity = 103/236 (43.64%), Postives = 141/236 (59.75%), Query Frame = 0 Query: 14 VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 +KSR++AR+I T+FH++ + ++KN +L+ EK EL ++A+GGR+AYQ AS LS SFH TSKWV L M PK ++ LR LEVGAI T LL CP L AIDL S+H +I Q DFF+ L PS + V+VSSMVIN +P SRG L+ +L+P G FLMLP CL +SK +T +F + + + +GF + E + +PKVA+F L Sbjct: 30 MKSRRKARQITTEFHRLTHELDAVKKNDTLSRDEKTRRVAELNAQIDAIGGRSAYQDASILSTSFHKTSKWVFQLLTKMD-RRPK---------------SKEAPLRTLEVGAINTQLLSCPWLNVRAIDLNSKHEKIEQCDFFS--LRPSGEYDVLVSSMVINCVPDAPSRGKMLQLSFQHLRP-GGLFFLMLPLLCLHNSKYMTYVRF-VEILKAVGFLVRETKESPKVAFFCL 245
BLAST of NO04G01210 vs. NCBI_GenBank
Match: ETL36103.1 (hypothetical protein L916_11889 [Phytophthora parasitica] >ETP12436.1 hypothetical protein F441_12221 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 161.4 bits (407), Expect = 4.300e-36 Identity = 106/236 (44.92%), Postives = 141/236 (59.75%), Query Frame = 0 Query: 14 VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 +KSR++AR++ T FH++ + L+++ SL ++K+ E+ LE LGGR AYQ AS LS SFH TSKWV +L L PK +Q LR+LEVGAI T LL CP L+ AIDL SRH I Q+DFF+ L P F V+VSSMV+N +P RG LR +L+ G LFLMLP CL HS+ +T A+F +L E +GFR+ E + +PKVA+ L Sbjct: 38 MKSRRKARQVTTNFHRLTHELDRLKQHKSLDESQKQRI-AEINRQLEELGGRQAYQDASILSTSFHRTSKWVF-QLLTRFELRPK---------------AKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHEHIEQRDFFS--LKPEGEFQVVVSSMVLNCVPGADKRGEMLRLYREHLK-EGGLLFLMLPLLCLRHSQFMTYARFAKIL-EAVGFRVRETKDSPKVAFLCL 252
BLAST of NO04G01210 vs. NCBI_GenBank
Match: ETL89340.1 (hypothetical protein L917_11728 [Phytophthora parasitica]) HSP 1 Score: 161.0 bits (406), Expect = 5.600e-36 Identity = 106/236 (44.92%), Postives = 141/236 (59.75%), Query Frame = 0 Query: 14 VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 +KSR++AR++ T FH++ + L+++ SL ++K+ E+ LE LGGR AYQ AS LS SFH TSKWV +L L PK + LR+LEVGAI T LL CP L+ AIDL SRH RI Q+DFF+ L P F V+VSSMV+N +P RG LR +L+ G LFLMLP CL HS+ +T A+F +L E +GFR+ E + +PKVA+ L Sbjct: 38 MKSRRKARQVTTNFHRLTHELDRLKQHKSLDESQKQRI-AEINRQLEELGGRQAYQDASILSTSFHRTSKWVF-QLLTRFKLRPK---------------AKPPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFS--LKPEGEFQVVVSSMVLNCVPGADKRGEMLRLYREHLK-EGGLLFLMLPLLCLRHSQFMTYARFAKIL-EAVGFRVRETKDSPKVAFLCL 252
BLAST of NO04G01210 vs. NCBI_GenBank
Match: POM71174.1 (Hypothetical protein PHPALM_12285 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 161.0 bits (406), Expect = 5.600e-36 Identity = 113/257 (43.97%), Postives = 150/257 (58.37%), Query Frame = 0 Query: 1 MGKKRKSQPVVEV----VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKE----LEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 M K +KS+ + + +KSR++AR++ T FH++ + L K A A+ +A R E + LE LGGR AYQ AS LS SFH TSKWV +L L PK +Q LR+LEVGAI T LL CP L+ AIDL SRH RI Q+DFF+ L P+ F V+VSSMV+N +P RG L+ +L+ G LFLMLP CL HS+ +T A+F +L E +GFR+ E + +PKVA+F L Sbjct: 10 MKKAKKSRKALHIAPPRMKSRRKARQVTTNFHRLTHELDRL-KQQKPADAQAQAQRNERMAQVNKQLEELGGRQAYQDASILSTSFHRTSKWVF-QLLTRFELRPK---------------AKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFS--LKPTGEFQVLVSSMVLNCVPGADKRGEMLKLYREHLK-EGGLLFLMLPLLCLRHSQFMTYARFTKIL-EAVGFRVRETKDSPKVAFFCL 245
BLAST of NO04G01210 vs. NCBI_GenBank
Match: XP_009821569.1 (hypothetical protein H257_00537 [Aphanomyces astaci] >ETV89169.1 hypothetical protein H257_00537 [Aphanomyces astaci]) HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36 Identity = 100/239 (41.84%), Postives = 142/239 (59.41%), Query Frame = 0 Query: 14 VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVLRAE 253 VKSR+RAR++ T+FH+V + L+ + + + +ELE L+ +GGR AYQ AS LS S H TS+WV L + K + LR+LEVGAI T L+ CP L+ AIDL++R+ +I+Q DFF L L + F V+VSSMVIN +PTP RG L+R ++L GHLFLMLP CLT+S +T F +L + IGF I +++ TPK+A++ L+ + Sbjct: 44 VKSRRRARELTTEFHRVTHELQRLKSSKAKKDDDASQRVQELEHRLKEMGGREAYQDASILSTSLHKTSRWVFQLLTKFELRPGK----------------KMSPLRVLEVGAINTQLVVCPWLDVLAIDLIARNPKIQQIDFFDLDL--TKRFDVVVSSMVINCVPTPEKRGEMLQRTWTHLN-DDGHLFLMLPLLCLTNSTYMTVDHFETIL-KRIGFTIRDKKETPKIAFYCLQKQ 262
BLAST of NO04G01210 vs. NCBI_GenBank
Match: OWZ08547.1 (hypothetical protein PHMEG_00018892 [Phytophthora megakarya]) HSP 1 Score: 159.5 bits (402), Expect = 1.600e-35 Identity = 106/237 (44.73%), Postives = 140/237 (59.07%), Query Frame = 0 Query: 14 VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATR-KELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 +KSR++AR++ T FH++ + L++ P E+ R E+ LEALGGR AYQ AS LS SFH TSKWV Q + +P +Q LR+LEVGAI T LL CP L+ AIDL SRH RI Q+DFFT L P+ F V+VSSMV+N +P RG L+ +L+ G LFLMLP CL HS+ +T A+F + E +GFR+ E + +PKVA+F L Sbjct: 34 MKSRRKARQVTTNFHRLTHELDRLKQQ---KPTEQRNERITEINKRLEALGGRQAYQDASILSTSFHRTSKWV---FQLLTRFERRP-------------RAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFT--LQPTGEFQVLVSSMVLNCVPGADKRGEMLKLYRQHLR-EGGLLFLMLPLLCLRHSQFMTYARF-TKIVEAVGFRVRETKDSPKVAFFCL 247
BLAST of NO04G01210 vs. NCBI_GenBank
Match: XP_024580405.1 (25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 [Plasmopara halstedii] >CEG44036.1 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 [Plasmopara halstedii]) HSP 1 Score: 158.3 bits (399), Expect = 3.600e-35 Identity = 108/251 (43.03%), Postives = 143/251 (56.97%), Query Frame = 0 Query: 3 KKRKSQPVVEV----VKSRKRARKIVTQFHKVNDAIAVLEKNASLAPAEKEATRKELEGNLEALGGRAAYQSASQLSVSFHNTSKWVLARLQAMGVLAPKPXXXXXXXXXXXXXXXRQRKLRLLEVGAITTTLLDCPALETTAIDLLSRHARIRQQDFFTLPLPPSLTFHVIVSSMVINSLPTPVSRGLFLRRCHSYLQPHTGHLFLMLPSSCLTHSKNITTAKFRLMLTENIGFRIMEERWTPKVAYFVL 250 K +KS+ + + +KSR++AR ++T+FH++ + LE+ ++ E+ L LGGR AYQ AS LS SFH TSKWV RL L PK +Q L +LEVGAI T LL CP L AIDL SRH RI Q DFF+ L P+ F ++VSSMV+N +P V RG LR +L G LFLMLP CL HSK +T ++F +L E +GFR+ E + +PKVA+F L Sbjct: 23 KTKKSRKALHIAPPRMKSRRKARNVITKFHRLTHELDRLEQQKLDEVETRKLRIAEINQELIELGGRQAYQDASILSTSFHRTSKWVF-RLLTRFELRPK---------------AKQPPLPVLEVGAINTQLLSCPWLNVRAIDLKSRHERIEQCDFFS--LKPAGEFQIVVSSMVLNCVPGAVKRGQMLRLYREHLM-DGGLLFLMLPLLCLRHSKFMTYSRFTKIL-EAVGFRVRETKDSPKVAFFCL 253 The following BLAST results are available for this feature:
BLAST of NO04G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01210 ID=NO04G01210|Name=NO04G01210|organism=Nannochloropsis oceanica|type=gene|length=2126bpback to top protein sequence of NO04G01210.1 >NO04G01210.1-protein ID=NO04G01210.1-protein|Name=NO04G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=293bpback to top protein sequence of NO04G01210.2 >NO04G01210.2-protein ID=NO04G01210.2-protein|Name=NO04G01210.2|organism=Nannochloropsis oceanica|type=polypeptide|length=316bpback to top Synonyms
Publications
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