NO04G00500, NO04G00500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00500 vs. NCBI_GenBank
Match: EWM28490.1 (dna repair protein rad50 [Nannochloropsis gaditana]) HSP 1 Score: 1592.4 bits (4122), Expect = 0.000e+0 Identity = 885/1401 (63.17%), Postives = 1017/1401 (72.59%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEWGTI 1440 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGAST+GQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLN FVPQAT IS AILESVVFCHQEESSWPLQDGATLKKKFDDIFES RYTKALEAIEKCRK RAEE KNL+LDLAAL ENRETASDI ELERKTAEIQ+IQAKQ+ VE+RI+TLQ R R G QEM G++DESLQ RL SFAK+ E+VQREL RLRQKE THKKA + YRAE+Q++VG+RGELKAQM Q+ QL+ DRN++IVA+CD YAL PRTL+G LSQ ELP VE KRFL DFQGK+E L+ EL+AF+T+K+R L + F ITN+LH QAAVPASVL +M+QEV +A+A+Y + K + MEFEKT+K L+K LREVAVELD EQKVWESMKE+S ERTEY+VN RD+T+KME L+AE+ARFNSS+YRP + DL P+L+ +QQAVT LNA L P H A ++QA L ARQ LTE+ TNQ+RDK+E + Y A+I +EK+S VEKAR ILE LQ EF EKIRKNPEKY Y+FDDR+I+ A++EV+ VV D+ + H+ ++K F ++ S E+ C CCT+ L A+ V+ LE+++ + +W DK +L E +LP H+Q L DL+AC +D+K + LR L EVE R+K A EQ A +V LEE + E KK ++E QV G+S+ CAELYKK+EELDF++KRLQ YSVDGD R LE VE SLK+LRATQ E NR LQE QAEQSKA+KR+INQA+LVRAAET+LE K+K MS ATEEEIPLRQ LK QADF+ LK RLDAE+AD+QR+ IEC QRYQ F+ALQ K+++ E LG L +E Q +L+ D+QG+EGQLEE+ PQ+QVVA R E KDQ RRQIEDN+TYRRM +E++K +EE+ L+ +++ KI AETT LAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTY+GNDIEEIAIVSGEDGGG+ATRSYNYRVVMKKG TLLDMRGRCSAGQRVLASIVIRLALAE FCI+CGVMTLDEPTTNLDHENK GLAGAIARLIAER RQQNFQLIVITHDEDFVDMVKQELSTQ G SMPEYYWR+SREPAPGGRAYSTIQ CEWGTI Sbjct: 1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQA-------------SGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCTTPLDAKGVELLEESLATGIRKWTDKVQKL-EVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSXXXXXXXXXXXXXXXXXXXXXXXXLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI 1387
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_002293244.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89705.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 440.7 bits (1132), Expect = 1.800e-119 Identity = 401/1434 (27.96%), Postives = 621/1434 (43.31%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSP-DDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTH---KKAIDGYRAEVQKLVGRRGELKAQ-------MKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQ-AAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDD-IQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKY----SYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVV----KSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDM-EAAKKKLDESKVQVVGISNACAEL----------YKKKEELDFRQKRLQ---AYS-VDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEW 1437 MA + K+++RG+RSFSP D+EQ I F PLT+IVG NG GKTTIIE LKYA TG LPPG S GQS++HDPK + VKASIKLRF R MVV+RS+++ K + N FK L+G+++T++P T + SL HKC +L+ +P G+S ILE VVFCHQE+SSWPLQ+GA LKK+FDDIF+STRY KALEAI+ RK A + K+LK DL L ++ AS R E E + + G ++TGQ + + D+ + + L KE +K ++G R + L R+G+L+A+ +KQ +L+E+ +K CD TL+ A + E ++ ++G K E DA + + + K A+ N + + V S +D +++ A + S+ + K IK + L+ +A ++ + K+ + + + E++E ++ + +++ LK ++ + NS + ++T +D + N I DA ++ A + + +L K ++R V Q L +A ++ +G +K+ Y D D E+ Q ++ ++ L + K ++++ K C CC + M A + + L E A+A E G ++ A +A G + L+D ++ K+KL E + + + A L + K+ ++ ++++L+ Y+ + ++R L VE L + A + + EQ + ++ + AA+ + K +R QE K + L G++ + ++ + P+R L ++D D +++ E++ + + + K+ + + VE + I+ E +L M P+++ + K+++D + + I ETTN+ V DL KY+ ALD+AL++YH MKI +INKII+ELW TY+G DI I I S +D G+A RSYNYR+VM KG T +DMRGRCSAGQRVLASIVIRLALAE FC+NCGVM LDEPTTNLD+ENK GLA A+A++IA R Q NFQL+VITHDEDFV M+K ELS+Q G +MPE Y++VSRE GR YS I +W Sbjct: 1 MASISKLSIRGVRSFSPNDEEQVIGFCFPLTIIVGANGCGKTTIIESLKYAVTGSLPPGNKS--GQSFVHDPKSIGQSSVKASIKLRFNNRGNHSMVVIRSMEVTQKKATAN--FKALDGILRTVDPNTGERTSLSHKCTELDKQIPHLMGVSKPILEHVVFCHQEDSSWPLQEGAVLKKRFDDIFDSTRYAKALEAIKGSRKEYASQVKDLKADLEGLKSHKHAASGFREEYEXXXXXXXXXXXXXXXXXXXXXXAKKKHNEAKKIQLAIEEFMSDLDMKRGEFEREEAVLAKQRELLGPDDLTGQYSMDELRGMLRELSDKHHGNQAVRALHDKEEEFEGIEKFLEGLRKKTNDLNSRKGKLEAEKDAHNVVLKQRFKLMEEIHKKHGVECDVTQTPDDDTLTQATAASRMSHSTVFTSGTGTTMDITISQEDIAAFERGLSQKEQTLRN---TWEGAKRRHRNEEDAMQKEIADLQAK-----------RSAVESDRRRINESKLEAMRELQAVGNQMSSAISRVRQSDVDEAKKQAADLARTRDELNNGSRRDDIAKEIKVQEDKLKSIASRIEQDMKIRKVLNDQKNEQSEIDMLEKQVSDEFLGLK-DMLKDNSYVLSEHGEHNVTVTTEDPVSPVEVAANNIRRKHLDA-----EDDVNRANEAIADL-----NGKIAEKRAVLSQNNGRLQQLKNRANQL--NAEGGAVQKVNNVVSAILRSDLYDPDLITADSKPSEIMQFLQDAISELSAIDVKPEVVSRILKPLKKKGKTDASCPCCLRDFV--DMDETTRFMNQMNALVDPDTSELMEMIXXXXXXXXXXXXXXXKWRTAIAQNINECIEYTGVNNEIKDLEAFIAAEGEGELKDLQDQDQSLKEKLSEKQKEASSLRTLLASLNTILDTARRIWTKEGQVKEKKEKLKYAFGYADLGNETRDLNTVEADLTKSNDAKEAAYTEINRLNGEQKDINDKISRVTNQAAAADRNAREKQDAFTRDQEASKRRDELNQLLGKLGDDDKELEKSLAPIRTHLLQKESDRDRMRTANGYEESKLGEELRGFEKDISRLAEITDKIDFYDNSNKEREILDVETSLNENADAIKDEEAKLVSMKPEIEQLKKQVDDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAK-DMGGEDAARILNEANTIHRESQEMKAVAEGKRQMLAEQRRALKRKLNEPEYKDVEERHRVKMIEYETTNIVVGDLDKYYDALDKALLRYHGMKINDINKIIKELWALTYKGEDITNIQITSDQDKAGRAARSYNYRIVMSKGNTTMDMRGRCSAGQRVLASIVIRLALAETFCLNCGVMALDEPTTNLDYENKRGLAIALAQIIASRAAQSNFQLVVITHDEDFVSMMKNELSSQTGFNMPERYYQVSREEGHDGRFYSKINAIDW 1400
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_009514339.1 (hypothetical protein PHYSODRAFT_293155 [Phytophthora sojae] >EGZ27064.1 hypothetical protein PHYSODRAFT_293155 [Phytophthora sojae]) HSP 1 Score: 437.2 bits (1123), Expect = 2.000e-118 Identity = 458/1423 (32.19%), Postives = 676/1423 (47.51%), Query Frame = 0 Query: 37 STMAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITN---DLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKAN--RLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRD----MEAAKKKLDESKVQVVGISNACAELYKKKEELDF------RQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELE---KEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMG---PQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGG--GKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEW 1437 + M+ +EK+++RGIRSFSP+ E+ +EFY PLT+++G NG GKTT+IECLK ACTG LPPG S GQS +HDPK+ EVKAS++LRF+ R GK MVV RS Q+ + KN TFK L+GVI+ +N + +K SL HKC +L+ +P G+S AILESV+FCHQEES+WPL++GA LKK+FD+IFES RYTKALEAI K +K R + K+ K DL L N TA IR ++E XXXXXXXXXXXXXXXXXXXXXXXXX + + SDE LQ L + E+ +R L+ +E + + + + L + ++ + ++V D++ L K L SQ + ++ F+ +F+ ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+T+ +L G D M +V +A+ +K+ M + I+ + + ++ +D+ + ++ +++ +E E DY K E +A L+ + L D + D + AV +++++ + + ++ EL A +RL E T+ ++E + K E+E+Q + + + + GE D R + VKE EQ + ++ + F K + C C ++ +A E A DK + ++ ++ E L+ T + M S R+ L E+E + ++ + LE G+ D +E ++K +++KV + + L K +EL R++R++A G R L +VE A QAE KL+ ++ +E + KE+ L+ ++ ++ + + E L E++ + + ++ A + QR E +R DF K ++++ L L V+ + H Q + ++ + PQ++ K L + +R I+DNL YR +Q E++K I ETT +AV DL +Y KALD +L+QYH K+EEIN IIR LW TY+G DI+ I +VSG + G KA RSY+YRVVMKK +DMRGRCSAGQ+VLA++VIRLALAE FC+NCG++ LDEPTTNLD ENK GLA AI ++ R +QQNFQL+ ITHDE+FV M+ + T G + PEYYWR+SRE G R S I+ EW Sbjct: 28 AAMSSIEKLSIRGIRSFSPNREEIVEFYHPLTVLLGDNGCGKTTVIECLKLACTGGLPPGARS--GQSLVHDPKIAGTNEVKASVRLRFRNRAGKAMVVQRSFQV--RQTKKNLTFKALDGVIRVVNELGEK-VSLSHKCGELDQHIPDMLGVSKAILESVIFCHQEESNWPLKEGAELKKRFDNIFESARYTKALEAIRKLKKARLDNAKDYKRDLDVLTVNMRTAEGIREKIE--LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVKEQSVRSAYGKIENIMNDSDEELQGFLNDYDGIIEDHRRAFGALKAQEARLQVEQNKSKEDYVALRASKARVETNIATYQKMV----ADLIDLAAKLGTKYRFHLQPLSSQ------------------------------------QDDISAFVAEFRNVVKDKQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALTSRLRELGGAGVHSQREADEMSSQVTEAEKSLEDYKQKNDVMALKSEIQGYNRQINDINDVIDALGQQIGQLRLYASKNSEIEFKRNDYLKKHEAFQATLSEKVADFEEILEGGDKPTDRDSLASAVGRIDSLIV-ERKRSCDTKRMELAAAEKRLMENTTSSKLAEKELDSLRQKKNELERQHMTGLKALLEKVIPGE----------------DLRNAELGVKEAEQAYADAKDKVVRRKNMVMFLNIYKKKGIKDHCCPLCERDMTPEEEQAFE-------AILSDKTDDGKVADKIKKAEELERSTLETLTGIKQQMPSWRKWL-ELETTIPQKVNELQEIYAAQKALENGVLDKKTALELIQEKFEDAKVAKTELDS----LRKTADELHMSDMTITREERMKASQGMG-GRSLADVEAEKD---AKQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLRMETQRKEYDDAIKEQNRLRDQEKTLKDACSKLKKSEPELEHEVRSKTTERETHRA---AAREQMRAQRTELQERQGDFRVFSDKCKQVQRGELEKLEREVQTLSDNIAHTKQREDTAIQSLADLVPQMKSAEKNLSKNEIVKRHIQDNLDYRALQKELEKLRXXXXXXXXXXGNLPALDDVNDRVESASMALIAAKESRAVVSGKKQQLMAQIRENKVELRVPNLKDVEEKYRHKLIQFETTQMAVADLDRYFKALDESLLQYHSRKVEEINTIIRSLWQITYKGQDIDTIELVSGHEQGVTAKAARSYDYRVVMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAITDILNARSQQQNFQLVCITHDEEFVQMLSR-TQTMDG-TRPEYYWRISREDIGGNRFVSKIERREW 1365
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_011003626.1 (PREDICTED: DNA repair protein RAD50 [Populus euphratica]) HSP 1 Score: 409.1 bits (1050), Expect = 5.800e-110 Identity = 385/1417 (27.17%), Postives = 653/1417 (46.08%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQ-------KRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASV----LDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVEL------------DSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELD---DIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDD--REIDEAVKEVEQV--VKMDVANLHDLQSKLNFAAK--VVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLIN---QADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ I F PLT+IVG NG+GKTTIIECLK ACTG+LPP S G S+IHDPK+ +TE K IKLRFK K +V +RS QL K +K +E V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+E++WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R + + + + ++ + ++E + L A+ E +DE LQ +++AS + +++RE+ + K K+ I+ Y E+ + L+ + + L +R+ +I + + L G L ++ + +D + +N + A K +LN+ IT ++ + L + ++ + E T + E EFE I+ Q +L + ++ DSE +V S+K + E E + + + ++E K ++ R ++ L P+ D +I Q + L + F + +R +E+ + + ++ E+ N SR +++ + I E + QSL + + + L+ K +++ +K Y D R++ + + V + V + + F K V +SS + S +A V D + ++ ++ +ET+P+ E+ L +L T +++ + + + V + K ++ V AL V + ++++ +K++D+ + YK LDFR + + R +EEV++ L +L+ T+ + +++++ EQ L + + +R + + L+ + +S+E E L + QVE E + E PL +E + +Q + + LK +L+ E +Q + Q + K+RE + G L ++++ E +QG + + +E+ ++ + +D RR IEDNL YR+++AEV++ E+ L+ ++ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G DI+ I+I S +G G TRSY+Y+V+M+ G L+MRGRCSAGQ+VLAS++IRLALAE FC++CG++ LDEPTTNLD N LA A+ R++ +R Q+NFQLIVITHDE F ++ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVITFLKPLTLIVGPNGAGKTTIIECLKVACTGELPPNARS--GHSFIHDPKVAGETETKGQIKLRFKTAAAKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIGQDQEKTEILKVQSQELESNLQNLD--AKIHHTEVTLKDMRKLQDQITIKTAERSTLFREQQRQYAALAEENEDTDEELQEWKTKFDEKIASLESNICKLEREMNDMETKGSFLKQNINEYIREISR-------LQTEAEAHASLKNERDSNIQKMYTRNNL-------GPLPNAPFSDDVAANLTNRLKSRLVDLDKDLQDKKTSNDIEVKRAENCYWDANERWKNTEAQKQAKVEIKNSILNR-----------------------------------ITEKEREHSSFEEQISHVNLSHIDEKEKNMRIEVERKTNQLAEREFESHIRQKQSELYGIEQQIKVLNREKDILAGDSEDRVKLSLK-----KVELENHKKKHRKIIDECKDKI--------RGVLKGRLPPDKDLKKEITQTLRTL-GLEFDDLNMKSREAEKEVNVLQMKIQEVNNNLSRHRKDMDSRKRFI-ESKLQSLDQLSFSVDLYLKALESSKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSMESSNADTVFQQLDK----LRMVYEEYTKIGKETIPLAEKNLSEL---TEELEQKSQALDDVLGVLAQAKAEKDSVEALVQPVETADRLFQEIQTWQKQVDDLE-------------YK----LDFRGQGV---------RTMEEVQSELSSLQGTKDNLHNEVEKLRDEQRYMENDLSHIQIRWHALREEKVTAANMLRDVKKSEE---ELERLVEEKHQVELEEKHLAEAVGPLSREKEKLQGEHNELKVQLEREYXXXXKQLDDFKQEVDTLVRIASKIREFYNLKKGERLKEMQEKLSLSESQLQGCDARKQEILAELNDSKNAVRSQDNLRRSIEDNLNYRKIKAEVEELTREIESLEERILKIGGFSSFEAELAKLLQERERLLSELNRFRGTMSVYQNNISKNKIDLKQVQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAG--TRSYSYKVIMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLHCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQR-------QHAERYYRVAKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_002300148.1 (DNA repair protein RAD50 [Populus trichocarpa] >PNT57771.1 hypothetical protein POPTR_001G320300v3 [Populus trichocarpa]) HSP 1 Score: 401.7 bits (1031), Expect = 9.300e-108 Identity = 383/1420 (26.97%), Postives = 648/1420 (45.63%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQ-------KRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALA----QPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKR---FLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASV----LDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVEL------------DSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATN---QSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDD--REIDEAVKEVEQV--VKMDVANLHDLQSKLNFAAKV-VKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ I F PLT+IVG NG+GKTTIIECLK ACTG+LPP S G S+IHDPK+ +TE K IKLRFK K +V +RS QL K +K +E V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+E++WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R + + + + ++ + ++E + L A+ E +DE LQ +++AS + +++RE+ + K K+ I+ Y E+ + L+ + + L +R+ +I + ++ L P + AL+ R+ + E+KR +D + +N + A K +LN+ IT ++ + L + ++ + E T + E EFE I+ Q +L + ++ DSE +V S+K + E E + + + ++E K ++ P +DL E+ +A+ + F + +R +E+ + + ++ E+ N Q +D ++R++ E + QSL + + + L+ K +++ +K Y D R++ + + V + V + + F K VK++S + + S+ + L + +E+ ++ +ET+P+ E+ L +L T +++ + + + V + K ++ V AL V + ++++ +K++D+ + YK LDFR + + R +EEV++ L +L+ T+ + +++++ EQ L + A + ++ E+E L + QVE E + E PL +E + +Q + + LK Q + K+RE + G L ++++ E +QG + + +E+ ++ + +D RR IEDNL YR+++AEV++ E+ L+ ++ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G DI+ I+I S +G G TRSY+Y+VVM+ G L+MRGRCSAGQ+VLAS++IRLALAE FC++CG++ LDEPTTNLD N LA A+ R++ +R Q+NFQLIVITHDE F ++ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVITFLRPLTLIVGPNGAGKTTIIECLKVACTGELPPNARS--GHSFIHDPKVAGETETKGQIKLRFKTAAAKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIGQDQEKTEILKVQSQELESNLQNLD--AKIHHTEVTLKDMRKLQDQITIKTAERSTLFREQQRQYAALAEENEDTDEELQEWKTKFDEKIASLESNICKLEREMNDMETKGSFLKQNINEYIREISR-------LQTEAEAHASLKNERDSNIQKMYTRHNLGPLPNAPFSDDVALNLTNRLKSRLVDLDKDLQDKKTSN--------------DTEVKRAENCYWDANERWKNTEAQKQAKVEIKNSILNR-----------------------------------ITEKEREHSSFEEQISHVNLSHIDEKEKNMRIEVERKTNQLAEREFESHIRQKQSELYGIEQQIKVLNREKDILAGDSEDRVKLSLK-----KVELENHKKKHRKIIDECKDKIRGVLKGRLPP--DKDLKKEITQTLRAL----GLEFDDLNMKSREAEKEVNVLQMKIQEVNNNLSKQRKDMDSRKRFI----ESKLQSLDQLSFSVDLYLKALESSKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMK--VLSMESSNADTLFQQLDKLRMVYEE-YTKIGKETIPLAEKNLSEL---TEELEQKSQALDDVLGVLAQTKAEKDSVEALVQPVETADRLFQEIQTWQKQVDDLE-------------YK----LDFRGQGV---------RTMEEVQSELSSLQGTKDNLHNEVEKLRDEQRYMENDLSHIQIRWHALREEKVTAANILRDVKKSEEELERLVEEKHQVELEEKHLAEAVGPLSREKEKLQGEHNELKVXXXXXXXXXXXXXDNFKQEVDTLVRIASKIREYYNLKKGERLKEMQEKLSLSESQLQGCDARKQEILAELNDSKNAVRSQDNLRRSIEDNLNYRKIKAEVEELTREIESLEERILKIGGFSSFEAELAKLLQERERLLSELNRFRGTMSVYQNNISKNKIDLKQVQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAG--TRSYSYKVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLHCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQR-------QHAERYYRVAKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_024580080.1 (dna repair protein rad50 [Plasmopara halstedii] >CEG43711.1 dna repair protein rad50 [Plasmopara halstedii]) HSP 1 Score: 401.4 bits (1030), Expect = 1.200e-107 Identity = 434/1444 (30.06%), Postives = 645/1444 (44.67%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYAL------AQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEV--EMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSL-------YRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDK--ANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRL-QAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKS-------------------RLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQ-------LEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGE-DGG-GKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEW 1437 M+ +EK+++RGIRSFSP+ E+ IEFY PLT+++G NG GKTT+IECLK ACTG LPPG S GQS +HDPK+ EVKASI+LRF+ R GK M++ R+ Q++ K+ TFK L+GVI+ +N + +K SL HKC +L+ +P G+S AILESV+FCHQEES+WPL++GA LKK+FD+IFES RYTKALEAI K +K R + K+ K DL L+ +R+TA DI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L + ++ + +LV D L KY +QP +SG L V EL E+ ++K D KK+ L + +KT + N+ +L G + M ++AK + K+ M + I + ++ +D + ++ + E T EV ++ K E +A L + + +P L + DI +T L ++ EL A Q L E AT+ +K+ E E + R QL+ + ++++ +K + D + + +KE E+ + ++ + F K + C C ++ +A E + ++ +DK AN+++E + + +L+ L ++ +++ + + LE ++D +AA D ++ QV A K E++ K + Y D R EE + +Q + R L +++AE+ ++ + K R E +A E+ LR++ K ++ ++ LK+ R +A + D + QR+E +R DF+ K +++E G LA +E+Q L +I + + L ++ PQ+++ + L + +RQI DNL YR +Q E++ E +L+ Q+ I ETT +AV DL +Y+KALD +L+QYH K+EEIN IIR LW TY+G DI+ I +VSG+ DG KA RSY+YRV+MKK +DMRGRCSAGQ+VLA++VIRLALAE FC+NCG++ LDEPTTNLD ENK GLA AI +++ R +QQNFQL+ ITHDE+FV M+ + + + S PE+YWR+ RE G R S I+ EW Sbjct: 1 MSSIEKLSIRGIRSFSPNREEIIEFYHPLTILLGDNGCGKTTVIECLKLACTGGLPPGARS--GQSLVHDPKIAGTNEVKASIRLRFRNRAGKVMLIHRTFQVRQTKKA--ITFKALDGVIRVVNELGEK-VSLSHKCGELDQHIPDMLGVSKAILESVIFCHQEESNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARMDNAKDYKRDLDILSAHRKTAEDI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVALCASKARVETNIDTYQKLVADLIDSASKLSTKYRFHLQPLSSQPEDVSGFLDAFKNV-----VKDKHDAVNSLDVKQRQDDDKMTTELLELSSQVKHLRDDLATKKQKLAD----LKREKTVIANR------------------------------------LRELGGAGIHSQRDAEEMTSQLAKTEKTIAEYRAKNNVMALKDEIHGFNLRINDINRVMDDLGQQINQLRLRARENTAIEVKRSEHRKKEEVFQATLFEKVADVEDIFEGGEKPKDRNTLLTAISDIDSRITERKRCL--------DAKKSELVSAEQHLMENATS------------SKLVEKE----LNLMRSTKNQLERQHMTRLKELLDKINPGHDLKSAELGIKEAERAYADAKDKVVRRKNMVMFLNIYKKKGLKEHCCPLCERDMTPAEAQAFESILS---SKTDDKKVANKIKEAE-ELEKSWLQTL----TEXXXXXXXXXXXXXXXXXXXXXXKELEVVYSAQKALEIDVKDKKAA---FDLAQEQVEDARTA-------KFEMEILCKTANELYHTDIALRKEEE------RMGGSQGSSGRSLSDVEAEKDAKQAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRKEEKFRMETQRKEYDEAVREQNRLREQEKALKDAYNQLKASEPELERKLRKKTSEREMRRTEARE-DLRAQRLELQERQGDFQVFSAKCKQVE----QGELAKLERQAHTLSDNIAQTKHREDAAIQSLTDLTPQIKIAEEVLSKNEIVKRQIHDNLDYRELQKELETLRIEAEDLKHQVGNLPLLDDVNDRVASASAALNMAEHSFAVMKGKRQQLMEDIRERKVQLRVPTLKDVEEKYRHKLIQFETTQMAVADLDRYYKALDESLLQYHSKKVEEINTIIRSLWQITYKGQDIDTIELVSGQLDGAVSKAARSYDYRVMMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAITDILSARSQQQNFQLVCITHDEEFVQMLSRTQTIEG--SRPEFYWRILRENIGGDRFVSKIERREW 1337
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_008867736.1 (hypothetical protein H310_04952 [Aphanomyces invadans] >ETW03507.1 hypothetical protein H310_04952 [Aphanomyces invadans]) HSP 1 Score: 401.0 bits (1029), Expect = 1.600e-107 Identity = 433/1424 (30.41%), Postives = 652/1424 (45.79%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRA----RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDL--TPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQ---ELKGVQADFDA----LKSRLDAEDADRQR-------QRIECTQRYQDFEALQRKVREMEGI---GLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGED-GGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEWGT 1439 M+ ++K+++RGIRSFSP +++I+F PLT+I+G NG GKTTIIECLK +CTG LPPG S GQS++HDPK+ D EVK S++LRF R G MVV R+ +LQ N F ++GV++ +N +K S+ KC +L+ +P G+S A+LESV+FCHQE+S+WPLQ+GA LKK+FDDIFES RYTKALEAI+K + RA + K+LK DL + E + A + + ++++ ++ ++ + + I L+ E T Q +E L A + +V+ ++ Q +MT KA+ +V L +G L +++L V+ R + + K+A LS SQ +R E+E+K ++EN+ D + + ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A AM+ E L+K+L + ++ Q ++ + + E R+ T A SL P + Q L TP D + L A+ A S+A TL Q AT + K+++E +V+K+ +Q L + +++LQ F + + PE A+ ++E + ++ + F K + C C ++ + + M +D N+ + + EQ ++ T + +A+ + L E + L LE L A + + QVV + K E+++F ++L D SR + SL + T EA L+ +Q + +L N+ + A EA ++ ++ ++K L R ++E Q LR+ +L Q DF L+ +++ D R + +R E TQ QD + ++ K E+E + G L +EQ+ Q L + + ++ + P+ L + + +RQI DN+ +R+++ V KA+E++ + +++ I ETT +AV DL KY+KALD +LM++H KIEEIN IIR LW TY+G DI+ I IVSG D G K+ RSYNYRVVM+K +LDMRGRCSAGQ+VLA +VIRLALAE FC+NCG++ LDEPTTNLD NK GLA AI+ ++ R +QQNFQLI ITHDE+FV M+ + S G S PEY+W VSRE S I W + Sbjct: 1 MSSIDKLSIRGIRSFSPGRDESIDFNQPLTVILGANGCGKTTIIECLKISCTGLLPPGARS--GQSFVHDPKIRGDVEVKGSVRLRFTRRAGHTMVVQRTYRLQQ--MKSNTKFSAMDGVVRMVNEHGEK-VSINQKCGELDKHIPDLLGVSKAVLESVIFCHQEDSNWPLQEGAVLKKRFDDIFESARYTKALEAIKKLKADRANQGKDLKRDLDVINEQVKRAREXXXXXXXRQSKLEALKLDENAISDNIDDLERHVVEANNVLAESRALNAEIVQKDNALVAMLHDIQRNYRSNPEFKEMSETTSQLNELLTNYDVIVATNNRQVEMIESQESQLQMT--KAM--ISEKVVNLRVGKGLLIKAIEKLRSAVKSRAEIACNMGRKHAFGS--FLSLNTSQELR--------------------QFWSRFQDALVEKEIELKNL------EQENVDLN-DTWNSTINKLETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKNNNAMSLIRDE------TFALEKELHSLTYDMQIAQNKVNILRGFEKDESALEHTRRNVT-------ASKLSVIESLCDPKLVQLLAHTPTEDSLAHDADTLEALSQASMAAVDESKA---TLRHQEAR--ATELNLKKEQEENFVSKL----RQELDLLEQGPMQELQRIFSAYLLQ-PE------------SALSQLETMYMEAKDKTLSRKNAVMFLKTYKKKGEKENCCPLCHRGMTPDELAVFSKLIADKM---DDSKNQEKIQKAERLEQQAFEVWKQTETLMPSWHRHQAILK---ELPAKSEMLNELYKQTRALEVDLTQARLALLQNEGKLAQVVEGCAMLKSVRKNHEQVEFDSRKLATLERDLISR----LADSLGSNPPTMTEAQGVLEAMQVNCRELETKLKNKQKEIHMAS---EAHMRLQGEVNKVREDKHILNQRNNELEKAKDQRDLLRATLRKLQDDLATSQRDFPGVQRELQIKVNERDISRMQLKQAMDVKRSELTQCQQDMQLVKTKHEEVEQLQKQNDEGKLQELEQELQLLNAQSERISREIAVLQPEKNRARSSLSETESFKRQIRDNIQFRQLRDNVDKAKEDIAVFKRKVDKFKSTAEAENACRVANQTLSAAKEARAKLAGKQDNLQELVREVQAQLAHRDLKNIDEKKRHKFIEYETTVMAVSDLDKYYKALDLSLMEFHSRKIEEINAIIRSLWQITYRGQDIDTIEIVSGHDTGDSKSKRSYNYRVVMRKDSAVLDMRGRCSAGQKVLAGLVIRLALAETFCLNCGILALDEPTTNLDTANKLGLAQAISDILIAREKQQNFQLICITHDEEFVQMLNR--SQMLGGSRPEYFWTVSREEIAPRYFVSKIDKRPWSS 1336
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_010414057.1 (PREDICTED: DNA repair protein RAD50 isoform X2 [Camelina sativa]) HSP 1 Score: 394.0 bits (1011), Expect = 1.900e-105 Identity = 384/1407 (27.29%), Postives = 648/1407 (46.06%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRREL-------ERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYAL----AQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKEN-LTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNK-MEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAI--LFPQHDAAARSQARELTLARQRLTELATN---QSRDKQEQERYV-AKIGEMEKQSL-VEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKM----DVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRS-QELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ + F+ PLT+IVG NG+GKTTIIECLK +CTG+LPP S G S+IHDPK+ +TE KA IKLRFK GK +V +RS QL K +K +E V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+ES+WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R + E ++ E++ KV+ + + + T E + ++R+A +++RE+ + + A Y E+ KL + E +A M L +R+ I + ++ L + P + LS R+ L E+EM L D + E L+T D + R + + IK L ++ R+V D+E +V S++++ E N + K ++E K + R ++ L PE D ++ V L +I + + +R +E+ + + ++ E+ + +D + ++RY+ +K+ ++++S+ ++ ++LE +EK ++ KY+ RE+ E +E+ + + + D + + SS+ + S +A +V D + ++ ++L E +P+ E+ L++ D K+ A L + LG + ++K ++ + AL + + +++ + +K++++ + YK LDFR ++ +EE+++ L +L++++ + L++++ EQ +R I+ A +AK + R + E++ L + Q++ +V+ TE PL +E + + +D++ +K R + E + ++ Q + K+ E + G L ++++Q+ E +Q E + E+ ++ + ++DQ RR IEDNL YR +AEV+K E+ L+ Q+ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G D++ I I S +G G TRSY+Y+V+M+ G T L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LAGA+ R++ +R Q+NFQLIVITHDE F M+ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNARS--GHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKVQMLELETSIQKVDAEVHNKEMMLK--DLRKLQDQVSRKTAERSTLFKEQQRQYAALPEENEDTIEELKEWKSKFEERIALLETKIRKMEREMDDTQTTISSLHNAKTNYMLEISKL---QTEAEAHM----LLKNERDSTIQNIFSRHNLGNVPSTPFSPEVVLSLTNRI---------------------------KSRLGELEMD--LLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKENERDTFEFEISSVDVKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLNRE-RDVMAG-DAEDRVKLSLRKTEQE------NLKKKNKKIIDECKDRI--------RVVLKGRLPPEKDMKKEIVQALRSIEREYSELSLKSREAEKEVNMLQMKIQEVNNSLFKHKKDTESRKRYIESKLQALKQESVTIDAYPKLLESA----KEKRDEHKRKYNMATGMREMFEPFEEIARSRHLCPCCERTFTSDEEDSFVKKQRANASSTVGHLKMLAVESSNADSVFQQLDKLRAVF----EEYSKLTSEVIPLAEKTLQE-HTEELDQKSQA-LDDVLG-ISAQIKADKDAIEALVQPLENTDRIFQEIVSYQKQIEDLE-------------YK----LDFRGLGVKT---------MEEIQSELNSLQSSKDILHDELEKLRDEQI-YMERDISCLQARWHAVREEKAKAANLLRDVTKAEEDLERLAEEKSQLDLDVKYLTEALGPLSKEKEQLLSDYNDMKVRRNQEYEELAEKKRNYQQEVEALLKASSKINEYHELKKGERLNDIQEKQRLSETQLQSCEARKNELAGELNRNKDLMRNQDQLRRNIEDNLNYRTTKAEVEKLTREIESLEEQILNIGGIPAVEAEMVKISRERERLLSELNRCRGTVSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAG--TRSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALLRIMEDRKGQENFQLIVITHDERFAQMIGQR-------QHAEKYYRVAKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_021834735.1 (DNA repair protein RAD50 [Prunus avium]) HSP 1 Score: 392.9 bits (1008), Expect = 4.300e-105 Identity = 381/1402 (27.18%), Postives = 638/1402 (45.51%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKEN----LTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQ-DLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQE---RYV-AKIGEMEKQSL-VEKARRILEQLQGEFEEKIRKNPEKYSYKFDD--REIDEAVKEVEQV--VKMDVANLHDLQSKLNFAAK--VVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSL-EAKLKTMSRSQELEKEKAA---LKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ I F+ PLT+IVG NG+GKTTIIECLK +C+G+LPP S G S+IHDPK+ +TE KA IKLRF+ GK +V +RS QL K FK ++ V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+E++WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R + + + + ++++ ++E I + + R + + QK+ A A++ E+ EL + K ++ I ++ KL + + + L + +E +I L + + R+ +I+ L E+E D Q KK++ L T D + R N + + + + ++ + ++A+ + E T + ++S+ + IK D + ++LDSE +V S+K +TE E + + ++E K R L L P+ D E+ + +A T F A +R +E+ + R+ E+ N S+ +++ + RY+ +K+ +++QS + ++L+ K +++ EK Y F D R++ + + V + + L+ + F K + +SS ++ SLSA + D + +E+ N + +ET+P E+ LRDL T +M+ + + + V ++K ++ + AL + + ++++ +K++DE +YK + Y G ++ L+++E+ L LR+ + L++ + + N R SL E K K + +++E+ +A L + QV+ + + E PL +E + D++ LK +LD E ++ ++ + Q L K+++ DQ +R IEDNL YR+ +AEV++ +E+ L+ ++ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G DI+ I I S +G G TRSY+Y+V+M+ G L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LA A+ R++ +R Q+NFQLIVITHDE F ++ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCSGELPPNARS--GHSFIHDPKVAGETETKAQIKLRFRTAAGKDVVCIRSFQLTQKASKME--FKAIDSVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDVAYKLRESISKDQEKTESVKSQMQELEGSIRDVDAKIRYTEATLKDLRELQDQISM--------------------KTAVRSTLFKEQQKKYADLAEENEDTDEELKEWKTK---FEERIALLETKISKLEREMEDTETKSGVLKKTLEKSIWEISKLQTEAEV--HRSSKSERDSIIQNFFTRHNLGSLPNPPFDDEVALNLTNRIKSRLLELEK-----DLQDKKKSNEFELKTAWDHYMDANGRWNNNEAQKEAKKGIKNGLLKRIKEKENERDSFELQVSNVDLSHIDEKEKNMSIEVERKKNQLARREFESTIIQKESELYSIGQMIKV--ADREKSILDLDSEDRVKLSIK-----KTELENLKKKHRKIIDEYK---DRIRGMLKGRLPPEKDFNKEITQVLRAATK----EFDDLSAKSREAEKEVNMLEMRVQEVNNNLSKHRKDMDSKMRYIESKLQALDQQSFTADSYPKVLD------SAKEKRDVEKRKYNFADGMRQMFDPFERVARANHICPCCERPFSLKEEDEFVKKQRMNSASSAEKIKVLAAESLSADSFFQQLDKL---RMVYEEYVN-IGKETIPNAEKELRDL---TEEMEQKSQALDDVLAVSAQVKADKDSIQALVQPIETADRLFQEIQTLQKQVDEL-------------VYKLE------------YQGQG-AKSLKDIESELNGLRSRE----DNLRDXXXXXXXXRRYMENDLSDTRIRWHSLKEEKGKAANILRDVERVEAELDHLTEEKSQVDLDEKHLEEAHGPLSREKDELLRDYNNLKVKLDREYEEQAEKKGKYQQEVVALLTLISKIKQYNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQLKRNIEDNLNYRKTKAEVEELSQEIESLEDRILKIGGKSKIEAEFGKLSQERERLLSELNIHRGTMSVYQKNISRDISDLKQAQYKEIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYICIHSDSEGAG--TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNADSLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR-------QHAEKYYRVAKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_006295998.1 (DNA repair protein RAD50 [Capsella rubella] >EOA28896.1 hypothetical protein CARUB_v10025142mg [Capsella rubella]) HSP 1 Score: 392.5 bits (1007), Expect = 5.600e-105 Identity = 382/1408 (27.13%), Postives = 649/1408 (46.09%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRREL-------ERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKEN-LTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELD---DIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELAT---NQSRDKQEQERYV-AKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEV----------EQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRS-QELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ + F+ PLT+IVG NG+GKTTIIECLK +CTG+LPP S G S+IHDPK+ +TE KA IKLRFK GK +V +RS QL K +K +E V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+ES+WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R + E ++ E++ KV+ + ++ + T E + ++R+A +++RE+ + + A Y E+ KL + E +A M L +R+ I + + L + + V+ + L E+E+ L D + E L+T D + R + ++ + E IK L ++ R+V D+E +V + S +TE E + + ++E K + R ++ L PE D +I QA+ + + + +R +E+ + + ++ E+ ++D + ++RY+ +K+ ++++S+ A L + E ++ ++ KY+ R++ E +EV E+ + + + +LN SS+E SS S + L+ G F ++ ++L E +P+ E+ L++ D K+ A L + LG + ++K ++ + AL + + L+++ + +K++++ + YK LDFR ++ +EE+++ L +L++++ + + L++++ +Q +R I+ A +AK + R + E++ L + Q++ +V+ TE PL +E + + ++++ +K R + E + ++ Q + K+ E + G L + ++Q+ E +Q E + E+ ++ + ++DQ RR IEDNL YR +A+V++ E+ L+ Q+ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G D++ I I S +G G TRSY+Y+V+M+ G T L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LAGA+ R++ +R Q+NFQLIVITHDE F M+ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNARS--GHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKGQMLELETSIQKVDAEVHNMEMMLK--DLRKLQDQVSRKTAERSTLFKEQQRQYAALPEENEDTIEELKEWKSKFEERIALLETKIRKMEREMDDTQTTISSLHNAKTNYMLEISKL---QTEAEAHM----LLKNERDSTIQNIFSHHNLGNVPSTPFSSDVVLNL-----------------------TNRIKSRLGELEID--LLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGVSKRIEEKEIERDSFEYEISTVDVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQHEIYSMEHKIKTLNRE-RDVMAG-DAEDRV-----KLSLRKTEQENLRKKHKKIIDECKDRI--------RGVLKGRLPPEKDMKKEIDQALRSIER-EYSELSLKSREAEKEVNMLQMKIQEVNNGLFKHNKDTESRKRYIESKLQALKQESVTIDAYPKLLESAKEIRDEHKR---KYNMATGMRQMFEPFEEVARSRHFCPCCERSFTSEEEDSFVKKQRLN-----ASSSAEHLKMLAVQSSNSDSVFQQLDKLRGIF-----EEYSKLTNEIIPLAEKTLQE-HTEELDQKSQA-LDDVLG-ISAQIKADKDSIEALVQPLENADRILQEIVSYQKQIEDLE-------------YK----LDFRGLGVKT---------MEEIQSELNSLQSSKDKLHNELEKLRDDQI-YMERDISCLQARWHAVREEKAKAANLLRDVTKAEEDLERLAEEKSQLDLDVKYLTEALGPLAKEKEQLLSNYNDMKVRRNQEYEELAERKRNYQQEVEALLKASSKINEYHELKKGERLNDILEKQRLSESQLQSNEARKNELAGELNKNKDLMRNQDQLRRNIEDNLNYRTTKAKVEELTREIESLEEQILNIGGIPAVEAEMVKISRERERLLSELNRCRGTVSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAG--TRSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALLRIMEDRKGQENFQLIVITHDERFAQMIGQR-------QHAEKYYRVAKD 1302 The following BLAST results are available for this feature:
BLAST of NO04G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00500 ID=NO04G00500|Name=NO04G00500|organism=Nannochloropsis oceanica|type=gene|length=5794bpback to top protein sequence of NO04G00500.1 >NO04G00500.1-protein ID=NO04G00500.1-protein|Name=NO04G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1402bpback to top protein sequence of NO04G00500.2 >NO04G00500.2-protein ID=NO04G00500.2-protein|Name=NO04G00500.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1440bpback to top Synonyms
Publications
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