NO04G00430, NO04G00430 (gene) Nannochloropsis oceanica

Overview
NameNO04G00430
Unique NameNO04G00430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1519
Alignment locationchr4:170613..172131 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:170613..172131 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO04G00430 vs. NCBI_GenBank
Match: XP_002996935.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY70313.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 149.4 bits (376), Expect = 1.000e-32
Identity = 72/152 (47.37%), Postives = 98/152 (64.47%), Query Frame = 0
Query:    7 YQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHMLRL 158
            Y VP GDF AYL G WKR LE R FG +++H R+++++V IE  +  A +P T FL W FGR+L+++DL   Y + F+ D   T +EW +E   CHG F     VA LNF   E   T+TYRV+D +TMAV IV+V+S H   +QYG+M R+
Sbjct:   14 YDVPNGDFCAYLKGFWKRNLEWRRFGASFKHLRSTNNIVFIEEDLDAAGQPNTQFLRWSFGRTLKQQDLSSAYTVQFIPDEQGTFMEWSFEGVTCHGVFKLEANVAILNFCLQESMVTITYRVLDANTMAVCIVDVDSEHTPTIQYGNMYRI 165          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: XP_024574827.1 (-like protein [Plasmopara halstedii] >CEG38458.1 -like protein [Plasmopara halstedii])

HSP 1 Score: 149.4 bits (376), Expect = 1.000e-32
Identity = 75/159 (47.17%), Postives = 101/159 (63.52%), Query Frame = 0
Query:    1 MTATL-VYQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHMLRL 158
            MTA +  Y +P+GD  AYL G WKR LE R FG  ++H R+++SVV IE     A +P T FL W FGR+L+++DL + Y + F+ D     +EW +E   CHG F P   VA LNF   E   T+TYRV+D +TMAV IV+V+S H   +QYG+M R+
Sbjct:    1 MTAAIKSYAIPSGDICAYLKGFWKRNLEWRHFGSGFQHLRSTNSVVFIEEDADAARQPNTQFLRWSFGRTLKQQDLAVAYTVQFIPDEQGIFMEWSFEGVTCHGVFKPETNVAILNFCLRESVVTITYRVLDANTMAVCIVDVDSEHTPTVQYGNMYRI 159          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: KUF96179.1 (Thymidylate kinase [Phytophthora nicotianae])

HSP 1 Score: 149.1 bits (375), Expect = 1.400e-32
Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 0
Query:    7 YQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHM 155
            Y VP GDF AYL G WKR LE R FG +++H R+++++V IE  +  A +P T FL W FGR+L+++DL   Y + F+ D   T +EW +E   CHG F P   VA LNF   E   T+TYRV+D +TMAV IV+V+S H   +QYG++
Sbjct:   11 YDVPNGDFCAYLKGFWKRNLEWRRFGASFKHLRSTNNIVFIEEDLDAARQPNTQFLRWSFGRTLKQQDLASAYTVQFIPDEQGTFMEWSFEGVTCHGVFKPEANVAILNFCLQESMVTITYRVLDANTMAVCIVDVDSEHTPTIQYGNI 159          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: XP_020437052.1 (hypothetical protein PPL_01935 [Heterostelium album PN500] >EFA84942.1 hypothetical protein PPL_01935 [Heterostelium album PN500])

HSP 1 Score: 145.2 bits (365), Expect = 2.000e-31
Identity = 72/155 (46.45%), Postives = 102/155 (65.81%), Query Frame = 0
Query:    5 LVYQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGY---CMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVESHRS-VLQYGHML 156
            L YQ+P  DF +YL+G WKR LE +EFG  + H RTS++VV+IE   G   +P    L W FG+SLEK +L+ GY   C+   ++T+ T LEW Y    CHG +LP   VA LNF  P+ +  VTYRV+DE+TM+V +VEV+  ++  +QYG+++
Sbjct:   43 LRYQIPDNDFYSYLIGTWKRNLEWKEFGGLFPHIRTSNTVVMIEEYRGYDNDPSARHLKWSFGKSLEKSELRFGYSMKCVQAPKNTE-TYLEWTYIGTVCHGKYLPSTNVAVLNFFQPQSTVLVTYRVIDENTMSVCVVEVDKKQTPSIQYGNIV 196          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: CCA17375.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA24382.1 conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 144.4 bits (363), Expect = 3.300e-31
Identity = 66/152 (43.42%), Postives = 98/152 (64.47%), Query Frame = 0
Query:    7 YQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHMLRL 158
            + + +GDF  YLLG WKR L+ R+FG +++H R ++++V IE     AA+P + FL W +G++ + +DL   Y + F+   + T +EW +E  KCHG F+    VATLNF  P    T+TYRV+D DTMAV IV+V++ H   +Q GHM R+
Sbjct:   13 HTISSGDFAKYLLGHWKRNLDWRQFGGSFKHLRVTNNIVHIEEDDEAAAQPSSKFLRWSYGKTCKPQDLTTAYSIQFLPSDECTYMEWSFEGVKCHGVFINVSNVATLNFCLPTAMVTITYRVLDRDTMAVCIVDVDNDHTPTIQCGHMYRI 164          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: XP_008865915.1 (hypothetical protein H310_03723 [Aphanomyces invadans] >ETW06138.1 hypothetical protein H310_03723 [Aphanomyces invadans])

HSP 1 Score: 143.3 bits (360), Expect = 7.400e-31
Identity = 70/166 (42.17%), Postives = 94/166 (56.63%), Query Frame = 0
Query:    3 ATLVYQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHMLRLPVMDSNMNDA 168
            +T  + V  GDF AYL+G WKRTLE R FG ++ H RT+              +P T FL W FGR L K +L + Y + F+ D   T +EW +E   CHG F P  +VA  NF   E   T+TYR++D +TMAV IV+V+S H   +QYG+M R+       +DA
Sbjct:    2 STTRFDVKDGDFAAYLVGTWKRTLEWRNFGSSFGHLRTTXXXXXXXXXXXXXKQPNTTFLKWSFGRGLRKNELTVAYTIQFIPDNKGTFMEWSFEGAMCHGLFKPEASVAIFNFCLHESMVTITYRILDANTMAVCIVDVDSDHTPTIQYGNMYRIDPAKYRADDA 167          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: GAY01616.1 (Hypothetical protein PINS_009450 [Pythium insidiosum])

HSP 1 Score: 143.3 bits (360), Expect = 7.400e-31
Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 0
Query:    7 YQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHMLRL 158
            Y +P GDF +YL G WKR LE R FG +++  R++++VV IE     A +P T FL W FGRS +K+DL   Y + F+ D + T +EW +E   CHG F P  +VA  NF   +   T+TYR++D +TMAV IV+V+S H   +QYG+M R+
Sbjct:   23 YAIPKGDFCSYLKGFWKRNLEWRHFGASFKLLRSTNNVVQIEEDPDAARQPNTQFLKWSFGRSHKKQDLVSAYTIQFIPDEEGTFMEWSFEGVTCHGVFKPEASVAIFNFCLQDSMVTITYRILDANTMAVCIVDVDSEHTPTIQYGNMYRI 174          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: GAY05186.1 (Hypothetical protein PINS_013001 [Pythium insidiosum])

HSP 1 Score: 142.9 bits (359), Expect = 9.700e-31
Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 0
Query:    7 YQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHMLRL 158
            Y +P GDF +YL G WKR LE R FG +++  R++++VV IE     A +P T FL W FGRS +K+DL   Y + F+ D + T +EW +E   CHG F P  +VA  NF   +   T+TYR++D +TMAV IV+V+S H   +QYG+M R+
Sbjct:   23 YAIPNGDFCSYLKGFWKRNLEWRHFGASFKLLRSTNNVVQIEEDPDAARQPNTQFLKWSFGRSHKKQDLVSAYTIQFIPDEEGTFMEWSFEGVTCHGVFKPEASVAIFNFCLQDSMVTITYRILDANTMAVCIVDVDSEHTPTIQYGNMYRI 174          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: GAY01629.1 (Hypothetical protein PINS_009458 [Pythium insidiosum])

HSP 1 Score: 142.9 bits (359), Expect = 9.700e-31
Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 0
Query:    7 YQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHMLRL 158
            Y +P GDF +YL G WKR LE R FG +++  R++++VV IE     A +P T FL W FGRS +K+DL   Y + F+ D + T +EW +E   CHG F P  +VA  NF   +   T+TYR++D +TMAV IV+V+S H   +QYG+M R+
Sbjct:   21 YAIPNGDFCSYLKGFWKRNLEWRHFGASFKLLRSTNNVVQIEEDPDAARQPNTQFLKWSFGRSHKKQDLVSAYTIQFIPDEEGTFMEWSFEGVTCHGVFKPEASVAIFNFCLQDSMVTITYRILDANTMAVCIVDVDSEHTPTIQYGNMYRI 172          
BLAST of NO04G00430 vs. NCBI_GenBank
Match: CCI48769.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 141.7 bits (356), Expect = 2.200e-30
Identity = 64/152 (42.11%), Postives = 93/152 (61.18%), Query Frame = 0
Query:    7 YQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHAIGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENKCHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVES-HRSVLQYGHMLRL 158
            Y +P+GDF  YL+G WKR L+ R FG +++H R +++V           +P T FL W +G++ + +DL   Y + F+   + T +EW +E  KCHG F     VATLNF  P    T+TYRV+D DTMAV IV+V++ H   +Q+GHM R+
Sbjct:   13 YSIPSGDFAKYLIGHWKRNLDWRHFGGSFKHLRVTNNVXXXXXXXXXXXQPSTKFLRWSYGKTCKLQDLTAAYSIQFLPSDECTFMEWSFEGVKCHGVFTNVSNVATLNFCLPTAMVTITYRVLDRDTMAVCIVDVDNDHTPTIQFGHMYRI 164          
The following BLAST results are available for this feature:
BLAST of NO04G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002996935.11.000e-3247.37conserved hypothetical protein [Phytophthora infes... [more]
XP_024574827.11.000e-3247.17-like protein [Plasmopara halstedii] >CEG38458.1 -... [more]
KUF96179.11.400e-3247.65Thymidylate kinase [Phytophthora nicotianae][more]
XP_020437052.12.000e-3146.45hypothetical protein PPL_01935 [Heterostelium albu... [more]
CCA17375.13.300e-3143.42conserved hypothetical protein [Albugo laibachii N... [more]
XP_008865915.17.400e-3142.17hypothetical protein H310_03723 [Aphanomyces invad... [more]
GAY01616.17.400e-3145.39Hypothetical protein PINS_009450 [Pythium insidios... [more]
GAY05186.19.700e-3145.39Hypothetical protein PINS_013001 [Pythium insidios... [more]
GAY01629.19.700e-3145.39Hypothetical protein PINS_009458 [Pythium insidios... [more]
CCI48769.12.200e-3042.11unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL077nonsL077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009720NSK009720Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00430.1NO04G00430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578069gene_1824Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100131g1gene2076Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00430.1NO04G00430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00430 ID=NO04G00430|Name=NO04G00430|organism=Nannochloropsis oceanica|type=gene|length=1519bp
ATGACAGCGACACTTGTCTATCAAGTCCCGGCAGGCGATTTTGGGGCTTA
TTTACTCGGGCCCTGGAAGCGCACTCTCGAGTGCCGGGAGTTTGGCAAGA
CCTACGAGCATCAACGGACGTCCAGTTCAGTTGTGGTAATTGAACATGCC
ATAGGAGTCGCAGCCGAGCCGCCGACTTATgtaagttatgcatgcatatg
tgtaggcaatcatcgagtgtgaatttgcgggaagacaggtgcgcgcttcg
cttcccgcggtaagtgtggatggagaaatgggaaagggcatgcgacggaa
agagaggtgatggcagcaatgcgatttgcctgtacccaccaagctgtata
cgtatgaggtttctggatagatatgccgctacgcaccaggggagaataaa
ataataaggttgaaaagtaagacgatagggcataatcaaattagtctcat
ggcggccactgtgagtgcttggcgcatggtcttttgaagcactctctcgg
cctgctttccttcacatactcatgtgcctgtattttatgatttcggatgt
tggcaattttgacatgtagccaaatatctgataacgacgacattgatacc
aaagcttgcagcaattgccacccagccaatttaccgcgctttaccccatc
cattcactctcactccttcttggcacccctacacccaacaacagTTTCTC
AATTGGAAGTTTGGCCGCTCATTGGAGAAGGAGGATCTGAAACTTGGCTA
CTGCATGCACTTTATGCGCGATACGGATATAACGAATCTGGAATGGCGGT
ATGAAGgtatgtgcaccatgctggataggcgtatagggtcacgctgattg
agagcaggaaagaaaatagtacagtgtggatcaaatcatttttcacacga
tgtactcataaaatttactctttcctttttttgacccaatcctcttgccc
agAAAACAAATGCCATGGTTGGTTCCTGCCGCATATTGCCGTCGCCACTC
TCAATTTTCGGACGCCCGAGCGCTCCACGACGGTGACATACAGGGTAGTG
GACGAGGATACCATGGCGGTCTCCATTGTGGAGGTGGAAAGTCATCGATC
CGTTTTACAATACGGACACATGCTGCGCTTGCCAGTGATGGACAGCAATA
TGAATgtaagcggcgttgggagacggagtaggggtggcatggggggagag
agatgatgatgatgctgtgaggcgaaagcaaaggtataacgcgacgcttg
acaaaaagaaatatagatattaacatgccgccatgttacatcgttttcag
atgcgtttgctttctttattggtggggggatgggggaagagggttgggca
gctcgagttgatttctgcacttttcgtcttggggatttcgtgagtgcatt
acaaccaacagagcccatttggtccacacacccacacccaacaccctctc
ctctctctcatacctcatacacagGACGCGCTTGCTGTTACCGCCGTTCG
CCACCTGCTTGTTTGCTGA
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protein sequence of NO04G00430.1

>NO04G00430.1-protein ID=NO04G00430.1-protein|Name=NO04G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=180bp
MTATLVYQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHA
IGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENK
CHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVESHRSVLQ
YGHMLRLPVMDSNMNDALAVTAVRHLLVC*
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Synonyms
Publications