NO04G00340, NO04G00340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00340 vs. NCBI_GenBank
Match: EWM28440.1 (folylpolyglutamate synthetase [Nannochloropsis gaditana]) HSP 1 Score: 595.9 bits (1535), Expect = 1.600e-166 Identity = 395/659 (59.94%), Postives = 447/659 (67.83%), Query Frame = 0 Query: 62 EDRAYLDALHHIALSLGVPRLRTPISPQQMDDDETRYARRDIFFTHFFSNVLGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRLWAKVQKALTDYSTEGGG-----GHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVGCYIEEVILDPPSSPTPPSXXXXXXXXXXXXXXXXXXXXXXPHTIRGVEVHPENFALAKGVLKTLLLSSSRGGWGGGKGRSRTVLMRRGWETRAFWPGRFELFPLQLEGGREGRRT--GRNGIRLHKRRPREALLLLDVAHNVDSVAKLLDEVRRRFF----PGYPASFSTFXXXXXXXXIIRTARVQGGCALWVLFGTGNDKDAKGMLDILXXXXXXXXXXXXXXXXXSYSGLKP---------------LDRLIFCQAKHPRARSVDELATFLPPSLLPSLDNPPIEPKRRXXXXXXXXKGDDRKTEVTILSPASSATPDRALAELLEDL--DPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYVVSAARAYLAQHRPGMLRETDWAFEADPPLYT 693 + RAY+DALH IA S G R + ++P + +DDE+RYARR FFTHFF++VLGGDQ YKF+HVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVND+LIS+ADFVRLW KV AL + G G WANFFDKVLGVALAWFVEQ+VEYIILEVGIGGRYDPTNF+A P VCVVTSVS+DHT+MLG+ LEAIAWQKAGI+KGGG +VCLTPA P QDP VL VLR EA++VGC +EE+ PS XXXXXXXXXXXXXXX TIRGVE+HPEN ALAK LK LL ++ + GW G G T+L+R GWE +A WPGRFEL PL L+ R+GRR GR EALL+LD AHN DSVAKLL E+RRRFF P YP + CALWVLFGTG DKDA+GML++L XXXXXXXX P DRLI C AKHPRAR V +L LPPS+ PS P + RR +VT+ +P+ +A P++ L EL +L P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAYLA+ PGMLRETD AFEADPPLYT Sbjct: 89 QSRAYIDALHQIARSAGAVRQISALTPSEAEDDESRYARRHAFFTHFFTHVLGGDQGRYKFIHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDVLISRADFVRLWHKVHAALVPSGIDDAGPVRCEGTWANFFDKVLGVALAWFVEQQVEYIILEVGIGGRYDPTNFIAHPIVCVVTSVSEDHTDMLGQDLEAIAWQKAGIMKGGGASVCLTPAVPYQDPRVLHVLRTEAQRVGCQLEEI---------APSSXXXXXXXXXXXXXXXSPTLRGVPTIRGVEIHPENHALAKSALKLLLFTAGKRGWSGRLG-EETILLRPGWEGKALWPGRFELIPLPLK-IRQGRRRAGGRXXXXXXXXXXXEALLILDGAHNTDSVAKLLGEIRRRFFGRPGPNYPG-----------------PGARRPCALWVLFGTGKDKDARGMLEVLLSPPSLVASXXXXXXXXXXXXXLPPSKATANMDAGEGKGFDRLILCSAKHPRARDVQDLVRALPPSVAPSFRPPHL--SRREARKRRRALERSEGIDVTLNAPSETARPEQQLRELFRELRVKPRKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYLAEQHPGMLRETDLAFEADPPLYT 717
BLAST of NO04G00340 vs. NCBI_GenBank
Match: WP_087167747.1 (MULTISPECIES: bifunctional folylpolyglutamate synthase/dihydrofolate synthase [Drancourtella] >OUN69179.1 hypothetical protein B5G11_10565 [Drancourtella sp. An57] >OUQ46432.1 hypothetical protein B5E64_06510 [Drancourtella sp. An12]) HSP 1 Score: 177.2 bits (448), Expect = 1.800e-40 Identity = 90/205 (43.90%), Postives = 127/205 (61.95%), Query Frame = 0 Query: 106 THFFSNVLGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRLWAKVQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVGCYIEEV 311 T F + LG QR K +HV GT GKG+VC ++ L GK+ G FTSPHL T+RERIR+ + +IS+ FVR++ +V+KA + EG G +F+ + G+A+ +F E+ EYIILE G+GGR D TN + P + V+TS+ DHTE+LG+++E IA +KAGI+K G +C A D L VL+ AE G E+ Sbjct: 25 TRVFLSYLGMPQREKKIIHVAGTNGKGSVCRYLQALLTGEGKKTGLFTSPHLVTIRERIRIGEEMISEEQFVRIFEEVRKAAGEMEKEGLG--HPTYFEFLFGMAMKFFDEEEAEYIILETGLGGRLDATNSIEHPVLTVITSIGMDHTEILGDTIEKIAAEKAGIIKPGVPLIC-----DATDEKALGVLKKTAENAGAECREI 222
BLAST of NO04G00340 vs. NCBI_GenBank
Match: WP_048620429.1 (bifunctional folylpolyglutamate synthase/dihydrofolate synthase [Drancourtella massiliensis]) HSP 1 Score: 167.9 bits (424), Expect = 1.100e-37 Identity = 86/205 (41.95%), Postives = 124/205 (60.49%), Query Frame = 0 Query: 106 THFFSNVLGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRLWAKVQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVGCYIEEV 311 T F + LG Q K +HV GT GKG+VC ++ LI GKR G FTSPHL T+RERI + + +ISK F+ ++ + +A+ T+G +F+ + G+A+ F + ++EYIILE G+GGR D TN + P + V+TS+ DHTE+LG+++E IA +KAGI+K G +C A D V +VLR AE G E+ Sbjct: 25 TRAFLSYLGTPQEKKKMIHVAGTNGKGSVCRYLQALLIGEGKRTGLFTSPHLMTIRERICIGEEMISKRQFLTVFEETLEAVRKMETDGLS--HPTYFEFLFGMAMKAFDDAKMEYIILETGLGGRLDATNSIEHPVLTVITSIGMDHTEILGDTIEKIATEKAGIIKPGVPLIC-----DASDETVQKVLRKTAENAGAPCREI 222
BLAST of NO04G00340 vs. NCBI_GenBank
Match: WP_053769658.1 (bifunctional folylpolyglutamate synthase/dihydrofolate synthase [Sellimonas intestinalis]) HSP 1 Score: 167.2 bits (422), Expect = 1.800e-37 Identity = 86/205 (41.95%), Postives = 124/205 (60.49%), Query Frame = 0 Query: 106 THFFSNVLGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRLWAKVQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVGCYIEEV 311 T F + LG Q K +HV GT GKG+VC ++ LI GKR G FTSPHL T+RERI + + +ISK F+ ++ + +A+ T+G +F+ + G+A+ F + ++EYIILE G+GGR D TN + P + V+TS+ DHTE+LG+++E IA +KAGI+K G +C A D V +VLR AE G E+ Sbjct: 25 TRAFLSYLGTPQEKKKMIHVAGTNGKGSVCRYLQALLIGEGKRTGLFTSPHLMTIRERICIGEEMISKRRFLTVFEETLEAVRKMETDGLS--HPTYFEFLFGMAMKAFDDAKMEYIILETGLGGRLDATNSIEHPVLTVITSIGMDHTEILGDTIEKIATEKAGIIKPGVPLIC-----DASDETVQKVLRKTAENAGAPCREI 222
BLAST of NO04G00340 vs. NCBI_GenBank
Match: WP_062304469.1 (bifunctional folylpolyglutamate synthase/dihydrofolate synthase [Ruminococcus sp. DSM 100440] >KYG87689.1 hypothetical protein AXF09_06335 [Ruminococcus sp. DSM 100440]) HSP 1 Score: 166.8 bits (421), Expect = 2.400e-37 Identity = 86/205 (41.95%), Postives = 124/205 (60.49%), Query Frame = 0 Query: 106 THFFSNVLGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRLWAKVQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVGCYIEEV 311 T F + LG Q K +HV GT GKG+VC ++ LI GKR G FTSPHL T+RERI + + +ISK F+ ++ + +A+ T+G +F+ + G+A+ F + ++EYIILE G+GGR D TN + P + V+TS+ DHTE+LG+++E IA +KAGI+K G +C A D V +VLR AE G E+ Sbjct: 25 TRAFLSYLGTPQEKKKMIHVAGTNGKGSVCRYLQALLIGEGKRTGLFTSPHLMTIRERICIGEEMISKRRFLTVFEETLEAVRKMETDGLS--HPTYFEFLFGMAMKAFDDAKMEYIILETGLGGRLDATNSIEHPVLTVITSIGMDHTEILGDTIEKIATEKAGIIKPGVPLIC-----DASDEIVQKVLRKTAENAGAPCREI 222
BLAST of NO04G00340 vs. NCBI_GenBank
Match: WP_022461760.1 (bifunctional folylpolyglutamate synthase/dihydrofolate synthase [Fusicatenibacter saccharivorans] >CDE64717.1 putative uncharacterized protein [Blautia sp. CAG:37] >CUP17235.1 Folylpolyglutamate synthase [Fusicatenibacter saccharivorans] >OKZ47689.1 tetrahydrofolate synthase [Blautia sp. CAG:37_48_57]) HSP 1 Score: 163.3 bits (412), Expect = 2.700e-36 Identity = 80/192 (41.67%), Postives = 118/192 (61.46%), Query Frame = 0 Query: 113 LGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRLWAKVQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVG 305 LG Q K +HV GT GKG+VC + L+A GK+ G FTSPHL + ER ++N +S F+ + KV+KA +Y EG G ++F+ + + + F E VEY+++E G+GGR D TN V +P C++TS+S+DHTE LG++LEAIA +KAGI+K G + A P V+ A+A+++G Sbjct: 32 LGNPQEGIKIIHVAGTNGKGSVCAYLNAMLLAGGKKTGLFTSPHLVRINERFQINGEDVSDEQFLNAFLKVEKAAKEYEAEGEG--HPSYFETLFLMGMLIFKEAGVEYLVMETGLGGRLDATNVVEKPLACIITSISRDHTEYLGDTLEAIAGEKAGIIKAGVPVI-----YDASQPGPASVIAAKAKEMG 216
BLAST of NO04G00340 vs. NCBI_GenBank
Match: WP_055228045.1 (bifunctional folylpolyglutamate synthase/dihydrofolate synthase [Fusicatenibacter saccharivorans] >CUO52267.1 Folylpolyglutamate synthase [Fusicatenibacter saccharivorans]) HSP 1 Score: 162.5 bits (410), Expect = 4.600e-36 Identity = 80/192 (41.67%), Postives = 118/192 (61.46%), Query Frame = 0 Query: 113 LGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRLWAKVQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVG 305 LG Q K +HV GT GKG+VC + L+A GK+ G FTSPHL + ER ++N +S F+ + KV+KA +Y EG G ++F+ + + + F E VEY+++E G+GGR D TN V +P C++TS+S+DHTE LG++LEAIA +KAGI+K G + A P V+ A+A+++G Sbjct: 32 LGNPQEGIKIIHVAGTNGKGSVCAYLNAMLLAGGKKTGLFTSPHLVRINERFQINGEDVSDEQFLDAFLKVEKAAKEYEAEGEG--HPSYFETLFLMGMLIFKEAGVEYLVMETGLGGRLDATNVVEKPLACIITSISRDHTEYLGDTLEAIAGEKAGIIKAGVPVI-----YDASQPGPASVIAAKAKEMG 216
BLAST of NO04G00340 vs. NCBI_GenBank
Match: WP_055220006.1 (bifunctional folylpolyglutamate synthase/dihydrofolate synthase [Fusicatenibacter saccharivorans] >CUP82143.1 Folylpolyglutamate synthase [Fusicatenibacter saccharivorans]) HSP 1 Score: 162.5 bits (410), Expect = 4.600e-36 Identity = 80/192 (41.67%), Postives = 118/192 (61.46%), Query Frame = 0 Query: 113 LGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRLWAKVQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVG 305 LG Q K +HV GT GKG+VC + L+A GK+ G FTSPHL + ER ++N +S F+ + KV+KA +Y EG G ++F+ + + + F E VEY+++E G+GGR D TN V +P C++TS+S+DHTE LG++LEAIA +KAGI+K G + A P V+ A+A+++G Sbjct: 32 LGNPQEGIKIIHVAGTNGKGSVCAYLNAMLLAGGKKTGLFTSPHLVRINERFQINGEDVSDEQFLDAFLKVEKAAKEYEAEGEG--HPSYFETLFLMGMLIFKEAGVEYLVMETGLGGRLDATNVVEKPLACIITSISRDHTEYLGDTLEAIAGEKAGIIKAGVPVI-----YDASQPGPASVIAAKAKEMG 216
BLAST of NO04G00340 vs. NCBI_GenBank
Match: KKU13303.1 (FolC bifunctional protein [Candidatus Magasanikbacteria bacterium GW2011_GWC2_45_8]) HSP 1 Score: 161.4 bits (407), Expect = 1.000e-35 Identity = 89/208 (42.79%), Postives = 127/208 (61.06%), Query Frame = 0 Query: 108 FFSNVLGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRL--WAK--VQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVGCYIEEVI 312 +F +LG ++ KFVHVTGT GKG+V LV L++ GKRVG FTSP + T E+I VN+ IS DF RL W K + +A T S G +F+ + +AL +F EQ+ + +LEVG GGR+D TN + P V V+T+V DHT++LG++L+ IA++KAGI+K G VC+ T Q P + ++ E KVG + V+ Sbjct: 44 YFLRMLGNSEKSMKFVHVTGTAGKGSVAHLVHRMLVSDGKRVGLFTSPFVTTTAEKIVVNNRFISARDFARLVGWMKPFISRAYTQCSYGG-----PTYFEVLFALALMYFREQKCAWSVLEVGCGGRFDATNVIPSPKVAVITNVDYDHTQLLGKTLKKIAYEKAGIVKKG--CVCI---TGEQRPRISAIIEKECAKVGAHFLYVV 241
BLAST of NO04G00340 vs. NCBI_GenBank
Match: KKU07115.1 (FolC bifunctional protein [Candidatus Magasanikbacteria bacterium GW2011_GWA2_45_39]) HSP 1 Score: 161.0 bits (406), Expect = 1.300e-35 Identity = 89/208 (42.79%), Postives = 127/208 (61.06%), Query Frame = 0 Query: 108 FFSNVLGGDQRYYKFVHVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDILISKADFVRL--WAK--VQKALTDYSTEGGGGHWANFFDKVLGVALAWFVEQRVEYIILEVGIGGRYDPTNFVARPAVCVVTSVSKDHTEMLGESLEAIAWQKAGILKGGGDTVCLTPATPAQDPAVLRVLRAEAEKVGCYIEEVI 312 +F +LG ++ KFVHVTGT GKG+V LV L++ GKRVG FTSP + T E+I VN+ IS DF RL W K + +A T S G +F+ + +AL +F EQ+ + +LEVG GGR+D TN + P V V+T+V DHT++LG++L+ IA++KAGI+K G VC+ T Q P + ++ E KVG + V+ Sbjct: 44 YFLRMLGNSEKSMKFVHVTGTAGKGSVAHLVHRMLVSDGKRVGLFTSPFVTTTAEKIVVNNRFISARDFARLVGWMKPFIARAYTQCSYGG-----PTYFEVLFALALMYFREQKCAWSVLEVGCGGRFDATNVIPSPKVAVITNVDYDHTQLLGKTLKKIAYEKAGIVKKG--CVCI---TGEQRPRISAIIEKECAKVGAHFLYVV 241 The following BLAST results are available for this feature:
BLAST of NO04G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00340 ID=NO04G00340|Name=NO04G00340|organism=Nannochloropsis oceanica|type=gene|length=3117bpback to top protein sequence of NO04G00340.1 >NO04G00340.1-protein ID=NO04G00340.1-protein|Name=NO04G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=693bpback to top Synonyms
Publications
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