Naga_100495g4, gene2143 (gene) Nannochloropsis gaditana

Overview
NameNaga_100495g4
Unique Namegene2143
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1240055..1242208 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100495g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1240055..1242208 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL112ngnoL112Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00340NO04G00340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2241rna2241-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2241rna2241Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2241

>rna2241-protein ID=rna2241-protein|Name=rna2241|organism=Nannochloropsis gaditana|type=polypeptide|length=717bp
MIDLKRQLRRASITTCPVPLTHLIGPYNMRRTVTPAASSLSSSSPASLSF
WGFSSYHGATAILVIAVTAAGAALHYVYQHHDLSPQKRQSRAYIDALHQI
ARSAGAVRQISALTPSEAEDDESRYARRHAFFTHFFTHVLGGDQGRYKFI
HVTGTKGKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDVLISR
ADFVRLWHKVHAALVPSGIDDAGPVRCEGTWANFFDKVLGVALAWFVEQQ
VEYIILEVGIGGRYDPTNFIAHPIVCVVTSVSEDHTDMLGQDLEAIAWQK
AGIMKGGGASVCLTPAVPYQDPRVLHVLRTEAQRVGCQLEEIAPSSSPPS
SPPSPPPSAMASPTLRGVPTIRGVEIHPENHALAKSALKLLLFTAGKRGW
SGRLGEETILLRPGWEGKALWPGRFELIPLPLKIRQGRRRAGGRNRREEG
RGRGREALLILDGAHNTDSVAKLLGEIRRRFFGRPGPNYPGPGARRPCAL
WVLFGTGKDKDARGMLEVLLSPPSLVASPPASSISSSSSPSLPPSKATAN
MDAGEGKGFDRLILCSAKHPRARDVQDLVRALPPSVAPSFRPPHLSRREA
RKRRRALERSEGIDVTLNAPSETARPEQQLRELFRELRVKPRKRGGRGRG
GGEEEEEEEEEEEEGGGEEGKEDEDVVLVVCGSFFVVSAARAYLAEQHPG
MLRETDLAFEADPPLYT
back to top
Synonyms
Publications