NO04G00060, NO04G00060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00060 vs. NCBI_GenBank
Match: EWM28418.1 (5 ampactivated protein kinase subunit beta [Nannochloropsis gaditana]) HSP 1 Score: 326.2 bits (835), Expect = 8.500e-86 Identity = 182/239 (76.15%), Postives = 189/239 (79.08%), Query Frame = 0 Query: 1 MGNFSGKDDSGEMRDGGAGGTLDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSLGTRALPGAEGREGGVGDEMVVDGDDVEEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNEDSSTLDIARKEEDLYDTHYPDVEEYSVKEPPPLPPHLRHIILNKV 240 MGNF+GKDDSGEMR+G G LD + XXXXXXXXXXXXXXXXXX PPS G L GAE G GDEM +DGDD E+DVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDF YIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNEDSSTLDIARKEE+LY T YPD+EEYSVKEPPPLPPHLRHIILNKV Sbjct: 1 MGNFAGKDDSGEMREGRGGSGLDESQGKIPPPTEFHHRREPGGXXXXXXXXXXXXXXXXXXGGAHTPTSVGPGPPSSGALVLTGAERGAEGAGDEMAIDGDDREDDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFMYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNEDSSTLDIARKEEELYGTSYPDIEEYSVKEPPPLPPHLRHIILNKV 239
BLAST of NO04G00060 vs. NCBI_GenBank
Match: CBN80160.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 219.5 bits (558), Expect = 1.100e-53 Identity = 109/162 (67.28%), Postives = 124/162 (76.54%), Query Frame = 0 Query: 81 ALPGAEGREGGVGD-EMVVDGDDVEEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNEDSSTLDIARKE---EDLYDTHYPDVEEYSVKEPPPLPPHLRHIILNK 239 A PGAEG G D E D + EE++VPTVFRWEHGGRQVYI GTFNNWE+QIPMHRSGNDFTYIH LK+GKHAFKFIVDDEWRFAPDQ TVAD+EGR+NNFIDV+ F + + + K+ D Y PD++EY+ KEPPPLPPHLRHIILNK Sbjct: 68 ARPGAEGPPGDAMDVEAKADEGEEEEELVPTVFRWEHGGRQVYITGTFNNWEKQIPMHRSGNDFTYIHTLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSDFVGYTGEENFEANRLKQLEANDKYSQCTPDLDEYT-KEPPPLPPHLRHIILNK 228
BLAST of NO04G00060 vs. NCBI_GenBank
Match: XP_009039475.1 (hypothetical protein AURANDRAFT_72117 [Aureococcus anophagefferens] >EGB05935.1 hypothetical protein AURANDRAFT_72117 [Aureococcus anophagefferens]) HSP 1 Score: 210.3 bits (534), Expect = 6.800e-51 Identity = 97/139 (69.78%), Postives = 111/139 (79.86%), Query Frame = 0 Query: 108 VPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNEDSSTLDIARKE--EDLYDTHYPDVEEYSVKEPPPLPPHLRHIILNKVSSRGD 245 VPTVFRWEHGGR VY+ GTFNNW++QIPMHRSGNDFTYIHNLK+GKHAFKF+VDDEWRFAPDQ TVAD+EGRINNFIDV+ F + D + L K +LY PD++EY+ K+PPPLPPHLRHIILNK D Sbjct: 500 VPTVFRWEHGGRVVYVTGTFNNWDKQIPMHRSGNDFTYIHNLKKGKHAFKFVVDDEWRFAPDQPTVADIEGRINNFIDVSDFDAYTGDENFLLRRTKSVGGELYTREIPDLDEYT-KDPPPLPPHLRHIILNKAPPSND 637
BLAST of NO04G00060 vs. NCBI_GenBank
Match: GAX28288.1 (5'-AMP-activated protein kinase, regulatory beta subunit [Fistulifera solaris]) HSP 1 Score: 209.9 bits (533), Expect = 8.900e-51 Identity = 104/171 (60.82%), Postives = 120/171 (70.18%), Query Frame = 0 Query: 103 VEEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPF-------------------------------NEDSSTLDIARKEED----LYDTHYPDVEEYSVKEPPPLPPHLRHIILNK 239 +++D VPTVFRWEHGGRQVYI GTFNNW RQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQ TVAD+EGRINNFIDVT FK + ++D++T +K+ D ++ PDV++Y+ KEPPPLPPHLRHIILNK Sbjct: 54 LDDDAVPTVFRWEHGGRQVYITGTFNNWSRQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVTGFKAYTGDKTFETERTAAMYGKTIVSVPSADSDGDLSDDNATTGSLKKQPDQDGEVFSNLMPDVDDYT-KEPPPLPPHLRHIILNK 223
BLAST of NO04G00060 vs. NCBI_GenBank
Match: GAX16348.1 (5'-AMP-activated protein kinase, regulatory beta subunit [Fistulifera solaris]) HSP 1 Score: 209.5 bits (532), Expect = 1.200e-50 Identity = 110/194 (56.70%), Postives = 130/194 (67.01%), Query Frame = 0 Query: 81 ALPGAEGREGGVGDEMVVDGDD-VEEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPF-------------------------------NEDSSTLDIARKEED----LYDTHYPDVEEYSVKEPPPLPPHLRHIILNK 239 A P E R+ + D + D+ +++D VPTVFRWEHGGRQVYI GTFNNW RQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQ TVAD+EGRINNFIDVT FK + ++D++T +K+ D ++ PDV++Y+ KEPPPLPPHLRHIILNK Sbjct: 37 APPVQEYRDTVMMDTTELPADNWLDDDAVPTVFRWEHGGRQVYITGTFNNWSRQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVTGFKAYTGDKTFETERTAAMYGKTIVSVPSADSDGDLSDDNATTGSLKKQPDQDGEVFSNLMPDVDDYT-KEPPPLPPHLRHIILNK 229
BLAST of NO04G00060 vs. NCBI_GenBank
Match: OEU16294.1 (AMPKBI-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 208.0 bits (528), Expect = 3.400e-50 Identity = 105/175 (60.00%), Postives = 118/175 (67.43%), Query Frame = 0 Query: 103 VEEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNED--------------------------------------SSTLDIA-RKEEDLYDTHYPDVEEYSVKEPPPLPPHLRHIILNK 239 +++D VPTVFRWEHGGRQVYI GTFN W RQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQ TVAD+EGRINNFIDVT FKP+ D SS L+ K+ +++ PD++EY+ KEPPPLPPHLRHIILNK Sbjct: 121 LDDDTVPTVFRWEHGGRQVYITGTFNGWSRQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVTDFKPYTGDREFEKEKAAADYGFISDDEEETTPATSGSDGKDSSGDGSSNLNAGPDKDGEVFSQTMPDMDEYT-KEPPPLPPHLRHIILNK 294
BLAST of NO04G00060 vs. NCBI_GenBank
Match: XP_002289917.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93454.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 207.6 bits (527), Expect = 4.400e-50 Identity = 103/164 (62.80%), Postives = 113/164 (68.90%), Query Frame = 0 Query: 104 EEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNED-----------------------------SSTLDIARKEEDLYDTHYPDVEEYSVKEPPPLPPHLRHIILNK 239 EED VPTVFRWEHGGR VYI GTFN W RQIPMHRSGNDFTYIHNL+RGKHAFKFIVDDEWRFAPDQ TVAD+EGRINNFIDVT FK + D SS ++ ++Y PD++EY+ KEPPPLPPHLRHIILNK Sbjct: 110 EEDTVPTVFRWEHGGRNVYITGTFNGWSRQIPMHRSGNDFTYIHNLRRGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVTDFKAYTGDREFEKERAAADYGSADSNDKPSAEGDETSSSGKKTGDRDGEVYGHAMPDLDEYT-KEPPPLPPHLRHIILNK 272
BLAST of NO04G00060 vs. NCBI_GenBank
Match: EJK53290.1 (hypothetical protein THAOC_27303 [Thalassiosira oceanica]) HSP 1 Score: 206.8 bits (525), Expect = 7.500e-50 Identity = 105/170 (61.76%), Postives = 114/170 (67.06%), Query Frame = 0 Query: 104 EEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNED------------------SSTLD-----------------IARKEEDLYDTHYPDVEEYSVKEPPPLPPHLRHIILNK 239 EED VPTVFRWEHGGR VYI GTFN W RQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQ TVAD+EGRINNFIDVT FK + D S D +A + D++ PD++EY+ KEPPPLPPHLRHIILNK Sbjct: 87 EEDTVPTVFRWEHGGRNVYITGTFNGWSRQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVTEFKAYRGDKEFETERTAINCTKWTSASGPSDGGEGASASTGKKGGAGRVADSDGDVFGHSVPDLDEYT-KEPPPLPPHLRHIILNK 255
BLAST of NO04G00060 vs. NCBI_GenBank
Match: XP_002180522.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47930.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 205.7 bits (522), Expect = 1.700e-49 Identity = 100/175 (57.14%), Postives = 119/175 (68.00%), Query Frame = 0 Query: 103 VEEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPF-----------------------NEDSSTLDI----------------ARKEEDLYDTHYPDVEEYSVKEPPPLPPHLRHIILNK 239 ++ED VPTVFRWEHGGRQVYI GTFN W RQIPMHRSGNDFTYIHNLKRGKHAFKFIVD+EWRFAPDQ TVAD+EGR+NNF+DVT FKP+ +D +++ A ++ +++ PDV++Y+ KEPPPLPPHLRHIILNK Sbjct: 110 LDEDAVPTVFRWEHGGRQVYITGTFNGWSRQIPMHRSGNDFTYIHNLKRGKHAFKFIVDNEWRFAPDQPTVADIEGRVNNFVDVTDFKPYTGDREFEREKAAAEYGAPLEAEDQQDEDNVNVVSTSIPNVDGQASGSKADQDGEVFSNTMPDVDDYT-KEPPPLPPHLRHIILNK 283
BLAST of NO04G00060 vs. NCBI_GenBank
Match: XP_024573370.1 (5 ampactivated protein kinase subunit beta [Plasmopara halstedii] >CEG37001.1 5 ampactivated protein kinase subunit beta [Plasmopara halstedii]) HSP 1 Score: 199.5 bits (506), Expect = 1.200e-47 Identity = 89/144 (61.81%), Postives = 110/144 (76.39%), Query Frame = 0 Query: 105 EDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNEDSSTLDIARKEED---LYDTHYPDVEEYSVKEPPPLPPHLRHIILNKVSSRGDG 246 EDVVP VF+WEHGGR V+I GTFN W++Q PMHRSGNDFTYI NL RGKH +KF+VDD+WRFAPDQLT+ADVEG +NN++DV+ F P ++ + +ED Y + P+++EY+ KEPPPLPPHLRHIILNK DG Sbjct: 114 EDVVPMVFKWEHGGRNVFITGTFNGWDKQCPMHRSGNDFTYIANLTRGKHMYKFVVDDDWRFAPDQLTMADVEGNVNNYVDVSEFAPLSDFDGKNQLQGDDEDPDNPYARYIPEIDEYT-KEPPPLPPHLRHIILNKAPPTVDG 256 The following BLAST results are available for this feature:
BLAST of NO04G00060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00060 ID=NO04G00060|Name=NO04G00060|organism=Nannochloropsis oceanica|type=gene|length=1691bpback to top protein sequence of NO04G00060.2 >NO04G00060.2-protein ID=NO04G00060.2-protein|Name=NO04G00060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=247bpback to top protein sequence of NO04G00060.1 >NO04G00060.1-protein ID=NO04G00060.1-protein|Name=NO04G00060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top Synonyms
Publications
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