NO03G05330, NO03G05330 (gene) Nannochloropsis oceanica

Overview
NameNO03G05330
Unique NameNO03G05330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4475
Alignment locationchr3:1519565..1524039 +

Link to JBrowse

Properties
Property NameValue
DescriptionEndoplasmic reticulum vesicle transporter protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1519565..1524039 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C
IPR006709SSU_processome_Utp14
Homology
BLAST of NO03G05330 vs. NCBI_GenBank
Match: EWM29979.1 (protein of unknown function DUF1692 [Nannochloropsis gaditana])

HSP 1 Score: 746.5 bits (1926), Expect = 8.600e-212
Identity = 361/439 (82.23%), Postives = 394/439 (89.75%), Query Frame = 0
Query:  366 MADSGMRRRAPVGAGAWGQDTDKPKAPMASAKVLERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYE-FMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSGVFLGKGTGFLAGTPR 804
            M +SGMRRRAP+ AGAWG D DKPKAP+ASAKVLERMDVFTKFHDEDK+QTSRGA+MALFSW+LVLVL+CSE YE F+T+ TKEHLVVDTSLG+KLNIT+D+TFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLS++G+ IGFPFLEDPTDF+SK+A AL  A+P DYCGSCF A T  G       +CCNSC+D+  AY +Q L +G+IK+TAPQC PGF+ P   GPMQKGEGCNL GFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSH+I H+SFGDEYPGRVNPLDGKVKYVS  +GTGLFQYFIKVIPT+YKGR G  IRTNRISVTERFKPLHKEGE RL GDSHAH DQTSVLPGVFFIYDLSPFNVEVSTV+ PFSHF+VKLCAIAGGVFSISRLLDN FYYSG+FLGKGTGFLAGTPR
Sbjct:    1 MTESGMRRRAPMNAGAWGADADKPKAPIASAKVLERMDVFTKFHDEDKIQTSRGASMALFSWVLVLVLLCSEAYEAFLTSRTKEHLVVDTSLGDKLNITLDMTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSSQGERIGFPFLEDPTDFDSKKADALLGAAPWDYCGSCFQARTHTG-------ACCNSCQDLEQAYLTQGLPMGKIKTTAPQCLPGFQAPAPSGPMQKGEGCNLKGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHTIQHVSFGDEYPGRVNPLDGKVKYVSSTVGTGLFQYFIKVIPTHYKGRAGEAIRTNRISVTERFKPLHKEGEARLTGDSHAHNDQTSVLPGVFFIYDLSPFNVEVSTVSVPFSHFLVKLCAIAGGVFSISRLLDNVFYYSGLFLGKGTGFLAGTPR 432          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: CBJ49158.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 308.9 bits (790), Expect = 4.600e-80
Identity = 176/465 (37.85%), Postives = 263/465 (56.56%), Query Frame = 0
Query:  363 PESMADSGMRRRAPVGAGAWGQDTDKPKAPMASAKVLERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSE--TYEFMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPG-RVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYK-----------------------------GRKGNVIRTNRISVTERFKPLHKEGEVRL-EGDSHAHAD-------QTSVLPGVFFIYDLSPFNVE-VSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYY 787
            P+S     +RRR      A+G D   P+      + ++++DV+ +  ++ +V+T  GA + +  W+L++VL   E   Y  + APT E +VVD+S+G+KL I ID+TFH++ C DVHVDAMDVAGDNQ+ ++H M KQRL  +G  IG  F+E P + +   A +L    P DYCGSCF          GA   CCN C DV+ AY ++  ++  I+ TA QC     +     P+  GEGCNL+GFMSVNKV+GNFH+A G+ V+++GRH+H +   +A  FN SHSI+ +SF + YPG + NPLD   + + +++GTG FQY+IK++PT +                                         +     +   H+EGE +  E +     D        +++LPGVFF+YD+SPF VE V     PFSH +++LCA+AGG F+IS ++D+  ++
Sbjct:    9 PQSSMGPMLRRRHEAVNPAFGNDA-APREGSLLERTIKQLDVYARVDEDLQVRTEAGAAVTIGFWVLMVVLCVGEVQAYRKVQAPT-ERVVVDSSMGQKLRINIDMTFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGEVDDDPAQSL----PEDYCGSCF----------GAKKGCCNMCRDVVDAYTAKGWSVQDIRRTAEQCIRDNHIET---PIVNGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTLEQAVGFNTSHSINLLSFWEPYPGMKPNPLDRTSRIIDEDVGTGAFQYYIKLVPTMHSLSPQSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLKGLTEYHTDHEEGEEQAKEAEKGLTQDGGVNSIVNSALLPGVFFVYDVSPFMVEVVPAEQPPFSHLLIRLCAVAGGAFAISGIVDSAVFH 454          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: POM63783.1 (Endoplasmic reticulum-Golgi intermediate compartment protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 293.5 bits (750), Expect = 2.000e-75
Identity = 167/420 (39.76%), Postives = 237/420 (56.43%), Query Frame = 0
Query:  371 MRRRA---PVGAGAWGQDTDKPKAPMASAKVLERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYS 788
            MR+RA    V  G  G D  +     ++ +VL+++DV+ K H E KVQT  GAT+++ + I++LVL  SE   + +  T EH+VVD+SLGEKL + +D+++ A+ C D H++AMDVAG+ Q+ +   M+K RL AEG  IG    E+    +           P  YCGSC+ A    GKD      CCN+CE+V  A+    L+L   +    QC    ++  +    Q GEGC   G M VN+VAGNFH+A G +  + GR +HQF P +   +N SH I  +SFG+  PG   PLDG  K   Q    G+FQY+IK++PT Y     N I + + SVT++   L+  G             Q + LPG FF++DLSPF V+V     PF+HF+ K+CAI GGV SI+  +D+F Y S
Sbjct:    1 MRQRAVKSDVDDGGLGDDAHESAVTRSARRVLKKVDVYPKMHREFKVQTEFGATVSVVAGIVMLVLFLSELSAYWSVNTHEHMVVDSSLGEKLQVNLDVSYLAINCRDAHINAMDVAGELQVNMHQTMVKTRLDAEGNAIGLSTAEELAKTD----------VPEGYCGSCYQAKHPAGKD------CCNTCEEVKEAFIHSDLSLEEAEQ-KEQCMR--EIMETEKLAQDGEGCRFTGKMFVNRVAGNFHVALGRTFHRQGRLVHQFRPGQEHTYNASHVIHSLSFGEPMPGATGPLDGVSKIAVQ--SGGVFQYYIKIVPTIYSDIDENAIHSYQFSVTQQGNYLNPRG-------------QMTSLPGTFFVFDLSPFMVKVENDRVPFTHFLTKICAIVGGVISIAGFVDSFMYNS 386          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: OQR89301.1 (endoplasmic reticulum-Golgi intermediate compartment protein [Thraustotheca clavata])

HSP 1 Score: 287.7 bits (735), Expect = 1.100e-73
Identity = 152/404 (37.62%), Postives = 237/404 (58.66%), Query Frame = 0
Query:  385 DTDKPKAPMASAKVLERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSG 789
            D ++     ++ ++L+++DV+ K H E KVQT  GAT+++ + ++++ L  SE   ++T    EH+VVDT+  EKL I  D+++ AL C + H+++MDVAG+ Q+ + H + K RL+A+G PIG      P       A  +    P +YCGSC+DA    G +      CCN+C+ V  A+     +L     T    +   K        Q GEGC LNG MSVN+VAGNFH+A G +  + GR +HQFIP +   +N SH +  + FG+ +PG+ NPLDG  K   Q     ++QY+IK++PT Y    G+V ++N+ S T++ + L+  G             Q +VLPGVFFI+D+SPF V++   + PF+HF++++CAI GG+ SI+  +D+F Y+ G
Sbjct:   11 DENEADKSFSTRRILKKVDVYPKLHREFKVQTEAGATVSIVTMVIMVTLFLSELSHYLTPNRHEHMVVDTTTNEKLLIAFDISYPALNCREAHMNSMDVAGELQVNMHHTVFKTRLAADGTPIGKAISHVP------NAQEVEETLPPNYCGSCYDAKHPAGLE------CCNTCDHVKEAFIHSDKSLEEADKTEQCIREAGK---EESESQDGEGCRLNGTMSVNRVAGNFHVALGRTFHRQGRLVHQFIPGQQYNYNASHIVHKLYFGNPFPGQSNPLDGVTKIADQ--AGAVYQYYIKIVPTIYDDGYGSV-QSNQYSFTQQTRYLNPYG-------------QMTVLPGVFFIFDISPFMVQMDVASVPFTHFLMRICAIIGGMISIAGFIDSFLYHYG 383          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: GAX22374.1 (hypothetical protein FisN_3Hh418 [Fistulifera solaris])

HSP 1 Score: 287.0 bits (733), Expect = 1.900e-73
Identity = 168/433 (38.80%), Postives = 246/433 (56.81%), Query Frame = 0
Query:  396 AKVLERMD-VFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFM--TAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKR----AGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFG--------DEYPGRVNPLDGKVKYVSQELG-TGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKE--GEVRLEGD---------------SHAHADQTS-------VLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSG 789
            A V++R+D +F K   E  V+T  G   +L ++IL+ +L  +ET  +M   A T E + VDTSLG K+ + +++TF  L C D+HVD MDVAGD+Q+ +   ++K+RLS  G+PIG   L+   +   +R       L    P +YCG C+ A+    +       CCN+C+++L AY +++     ++ T+ QC    +       M++GEGCNL+G++ VN+VAGNFHIA G+ + +DG+HIH F P + P FN SH I  +SFG         E P +   L+G  K V+++ G TGLFQYFIKV+PT+Y    G  I TN    TERF+PL KE   E   E +                HAH  +TS       VLPGVFFIY++ PF V++     P +H +++L A  GGVF++ +L DN  Y +G
Sbjct:   55 ANVVKRLDFMFPKVDQEYTVKTDGGGYFSLIAYILIAILSLAETISWMNQNAQTLEQIAVDTSLGRKMRVNMNITFPNLACEDLHVDVMDVAGDSQLDIFDTLVKKRLSRSGRPIGNDVLKAEANANQQRQEEKLRLLKEKLPENYCGPCYGANDDENQ-------CCNTCDELLEAYIAKKWRTDIVQYTSEQCMREGRDKKEPKRMKRGEGCNLSGYLEVNRVAGNFHIAMGEGIERDGKHIHTFNPEDTPNFNASHIIHDLSFGASGTKVGFGEEPQKT--LNGVSKIVTRQHGTTGLFQYFIKVVPTSYITDSGVRIATNGYFFTERFRPLMKEYIAEDDYEDEDETDENGKRIVAVQAGHAHKAKTSNHDVRNAVLPGVFFIYEIYPFEVQIRKNKVPLTHLLIRLMATVGGVFTMFKLADNLLYSAG 478          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: OQR83742.1 (endoplasmic reticulum-Golgi intermediate compartment protein [Achlya hypogyna])

HSP 1 Score: 285.0 bits (728), Expect = 7.100e-73
Identity = 156/418 (37.32%), Postives = 244/418 (58.37%), Query Frame = 0
Query:  371 MRRRAPVGAGAWGQDTDKPKAPMASAKVLERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSG 789
            M R+  +G    G+ TD   A  ++ ++L+++DV+ K H E KVQT  GAT++L + ++ ++L  SE   ++T    EH+VVDT+  EKL IT D+++ AL C + H+++MDVAG+ Q+ + + + K RL+ +G PIG      P   E      +    P +YCGSC+DA    G       +CCN+C+DV  A+ S   +L   ++T  QC    +        + GEGC L+G M+VN+VAGNFH+A G +  + GR +HQFIP +   +N SH +  + FG  +PG+ NPLD   K   +     ++QY+IK++PT Y    G+V + N+ S T++ + L+  G             Q +VLPGVFFI+D+SPF V++     PF+HFV+++CAI GG+ SI+  +D+  Y+ G
Sbjct:    1 MLRQRNLGKDEDGEPTD---ATFSTRRILKKVDVYPKLHREFKVQTETGATVSLVAMVITVILFLSELSHYLTVDRHEHMVVDTTTNEKLLITFDISYPALNCREAHMNSMDVAGELQVNMHNTVFKTRLAPDGTPIGKAISHVPNGEE------VPITLPPNYCGSCYDAEHPTGL------TCCNTCDDVKEAFMSIGKSLEEAETT-EQCMR--EAGKEENESKDGEGCRLHGTMAVNRVAGNFHVALGRTFHRQGRLVHQFIPGQQYSYNASHIVHKLYFGTPFPGQANPLDSMTKIADKP--GAVYQYYIKIVPTIYDDGYGSV-QANQFSYTQQTRFLNPYG-------------QMTVLPGVFFIFDISPFMVQMDAARVPFTHFVMRVCAIIGGMVSIAGFVDSLLYHYG 384          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: XP_002177015.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51478.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 283.1 bits (723), Expect = 2.700e-72
Identity = 169/447 (37.81%), Postives = 249/447 (55.70%), Query Frame = 0
Query:  394 ASAKVLERMD-VFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMT--APTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLE--DPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASP---SCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRV-------NPLDGKVKYVSQELG-TGLFQYFIKVIPTNYKGRKG-----NVIRTNRISVTERFKPLHKE-------GEVRLEGDSHA---------HADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSGVFLGKGTGFLAGTPR 804
            A++  ++++D +F K   E  VQT RG   +L +++L+ VL  +ET  +++    T +H+ VDTSLG+++ + +++TF +L C D+HVD MDVAGD+Q+ +E  + K+++   G+      L+       +S++A       P  YCG C+          GA P   +CCN+C+ +L AY+ +      +  TA QC    +    + P+ +GEGCNL+GFMS+N+VAGNFHIA G+ + +DGRHIH F P ++  +N SH I H+SFG E  G+        + L+G  K V+ E G TGLFQYFIKV+PT Y G  G         TNR   TERF+PL KE        E   +   HA         H  + SVLPGVFF+Y++ PF VE+  V+ P +H +++L A  GGVF+I R +D             T  L G PR
Sbjct:   71 ATSVAVKKLDFLFPKVDTEYTVQTDRGGLASLVAYLLIAVLALAETASWLSHNRDTVDHVRVDTSLGQRMRVNLNITFPSLACDDLHVDVMDVAGDSQLNIEDTLTKRKMDRTGRYGQAEILQSNQHEQEQSRKAKLRQDPLPDTYCGPCY----------GAQPDVDACCNNCDALLDAYKLKGWRTDLVLYTAEQCIREGRDQKKLRPLIQGEGCNLSGFMSLNRVAGNFHIAMGEGLQRDGRHIHVFDPEDSEHYNASHVIHHLSFGPEIQGKTKSGNLDSSSLNGVTKMVTPEHGTTGLFQYFIKVVPTTYLGPGGRRDESGTFETNRYFYTERFRPLMKEYLPEEAVAEDPKQAAVHAGGGHRTHDHHHVRNSVLPGVFFLYEIYPFAVEIHPVSVPLTHLLIRLMATIGGVFTIVRWVD-------------TAVLEGNPR 494          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: XP_008613726.1 (hypothetical protein SDRG_09560 [Saprolegnia diclina VS20] >EQC33040.1 hypothetical protein SDRG_09560 [Saprolegnia diclina VS20])

HSP 1 Score: 280.0 bits (715), Expect = 2.300e-71
Identity = 149/395 (37.72%), Postives = 236/395 (59.75%), Query Frame = 0
Query:  394 ASAKVLERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSG 789
            +++++L+++DV+ K H E KVQT  GAT+++ + +   +L  SE   ++T    EH+VVDTS  EKL IT D+++ AL C + H+++MDVAG+ Q+ + + + K RL+ +G PIG      P   E      + A  P +YCGSC+DA    G        CCNSC++V  A+     +L   ++T  QC    +        + GEGC L+G M+VN+VAGNFH+A G +  + GR +HQF+P +   +N SH +  + FG  +PG+ NPLDG  K ++ + G  ++QY++K++PT Y    G+V ++N+ S T++ + L+  G             Q +VLPGVFFI+D+SPF V++     P +HFV+++CAI GG+ SI+  +D F Y+ G
Sbjct:   18 STSRMLKKVDVYPKLHREFKVQTETGATVSIVAMVXXXILFLSELSHYLTVDRHEHMVVDTSTNEKLLITFDISYPALNCREAHMNSMDVAGELQVNLHNTVFKTRLAPDGTPIGKAISHVPNGAE------VPATLPPNYCGSCYDALHPTG------ALCCNSCDEVKEAFMFSEKSLEEAEAT-EQCMR--EAGKEESESKDGEGCRLHGTMAVNRVAGNFHVALGRTFHRQGRLVHQFVPGQQYSYNASHVVHKLYFGTPFPGQSNPLDGMTK-IADKAG-AVYQYYLKIVPTIYDDGYGSV-QSNQFSYTQQTRFLNPYG-------------QMTVLPGVFFIFDISPFMVQMDAARVPLTHFVMRVCAIVGGMVSIAGFVDAFLYHYG 381          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: XP_009522783.1 (CopII vesicle protein [Phytophthora sojae] >EGZ20066.1 CopII vesicle protein [Phytophthora sojae])

HSP 1 Score: 279.3 bits (713), Expect = 3.900e-71
Identity = 166/418 (39.71%), Postives = 235/418 (56.22%), Query Frame = 0
Query:  371 MRRRAPVGAGAWGQDTDKPKAPMASA-KVLERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYS 788
            MR+RA       G   D   A   SA +VL+++DV+ K H E KVQT  GAT+++ + I++ +L  SE   + +  T EH+VVD+SLGEKL + +D++F A+ C D H++AMDVAG+ Q+ +   ++K RL A+G  IG P      +   ++A     A P  YCGSC  A    GK+      CCN+CEDV  A+     +L   +    QC    ++  +    Q GEGC   G M VN+VAGNFH+A G +  + GR +HQF P +   +N SH I  +SFG+  PG   PLDG  K   Q    G+FQY+IK++PT Y     N I + + SVT++   L+  G             Q + LPG FF++DLSPF V+V     PF+HF+ K+CAI GGV SI+  +D+F Y S
Sbjct:    2 MRQRAVKSDVDDGGLGDGESAVTRSARRVLKKVDVYPKMHREFKVQTEFGATVSIVAGIVMAILFLSELSAYWSLNTHEHMVVDSSLGEKLQVNLDVSFLAVNCRDAHINAMDVAGELQVNMHQTVVKTRLDADGNTIGRPISMITDEGAEEQA---KTALPEGYCGSCHGAQHPAGKE------CCNTCEDVKEAFIYSDFSLEDAEQ-KEQCVR--EIMEAEKLAQDGEGCRFTGKMFVNRVAGNFHVALGRTFHRQGRLVHQFRPGQEHTYNSSHIIHSLSFGEPMPGVAGPLDGVSKIAEQ--SGGVFQYYIKIVPTIYSDIDENTIHSYQFSVTQQGNYLNPRG-------------QMTSLPGTFFVFDLSPFMVKVENDRMPFTHFLTKVCAIVGGVISIAGFVDSFMYNS 392          
BLAST of NO03G05330 vs. NCBI_GenBank
Match: XP_629760.1 (endoplasmic reticulum-golgi intermediate compartment protein 3 [Dictyostelium discoideum AX4] >Q54DW2.1 RecName: Full=Probable endoplasmic reticulum-Golgi intermediate compartment protein 3 >EAL61357.1 endoplasmic reticulum-golgi intermediate compartment protein 3 [Dictyostelium discoideum AX4])

HSP 1 Score: 277.7 bits (709), Expect = 1.100e-70
Identity = 160/392 (40.82%), Postives = 229/392 (58.42%), Query Frame = 0
Query:  399 LERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDY--CGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQC-QPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYS 788
            L++ D + K  D+ +V+T  GA +++   + +L L  S+   + +      L VDT+ GEKL I +D+TFH L CA + +DAMDV+G++Q  V HN+ K+RLS  GQPI    +E P   E +     +    +D   CGSC+ A     +D      CCN+CE+V  AY   +   G   S  PQC + GF   +     Q GEGC + GF+ VNKVAGNFH A G S  +   H+H   P +   FNVSH+I+ +SFG+++PG  NPLD   K  ++ +G G+FQYF+KV+PT Y+G  GN I TN+ SVTE ++ L K+GE            + S LPG+FF+YDLSP  ++VS     F+ F+  +CAI GGVF++  + D+F YYS
Sbjct:    6 LKKFDAYPKTVDDFRVKTYTGAIVSIIGGVFILWLFFSQVTLYFSTDIHHELFVDTTRGEKLKINMDITFHHLPCAYLSLDAMDVSGEHQFDVAHNIFKKRLSPTGQPI----IEAPPIREEEINKKESVKDNNDVVGCGSCYGA-----EDPSKGIGCCNTCEEVRVAY--SKKGWGLDPSGIPQCIREGFTKNL---VEQNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGSFNVSHTINRLSFGNDFPGIKNPLDDVTK--TEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAKKGE------------EPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYS 369          
The following BLAST results are available for this feature:
BLAST of NO03G05330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29979.18.600e-21282.23protein of unknown function DUF1692 [Nannochlorops... [more]
CBJ49158.14.600e-8037.85conserved unknown protein [Ectocarpus siliculosus][more]
POM63783.12.000e-7539.76Endoplasmic reticulum-Golgi intermediate compartme... [more]
OQR89301.11.100e-7337.62endoplasmic reticulum-Golgi intermediate compartme... [more]
GAX22374.11.900e-7338.80hypothetical protein FisN_3Hh418 [Fistulifera sola... [more]
OQR83742.17.100e-7337.32endoplasmic reticulum-Golgi intermediate compartme... [more]
XP_002177015.12.700e-7237.81predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_008613726.12.300e-7137.72hypothetical protein SDRG_09560 [Saprolegnia dicli... [more]
XP_009522783.13.900e-7139.71CopII vesicle protein [Phytophthora sojae] >EGZ200... [more]
XP_629760.11.100e-7040.82endoplasmic reticulum-golgi intermediate compartme... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005337NSK005337Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05330.1NO03G05330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573298gene_1747Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100360g2gene666Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05330.1NO03G05330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05330 ID=NO03G05330|Name=NO03G05330|organism=Nannochloropsis oceanica|type=gene|length=4475bp
ATGGCGGGGGGAGGGAGGGAGGGGGAGGGCGAGGAGGAGGAGGAGGAGGG
AGATTCGAATCCCTGGATGGTGGCACAAGGGAGTTTCCGGTCAGCGAGTG
AGGGCGCGGCGGGGAAGCGGCGAACACGCCGGAGCAGTACCAGCAGCAGC
AGCAGCAGCAGGAGTCTGCTGGATGTCCAGCGGGCGGTGGAGGCAGTGAT
GCAGGAGGTGGACGGCGGGGAGGAGGATATGGTGGAAGAGAGTGCAACTG
GCACCACCACCACTACAGGGGGTAAGAGGAAGAGGGGAAAGAGGGGAGGG
AAGGGTAAGGGTGGTTCCTCTTCCATGATTGCGGGAGCTGAGGGCGAGGA
GGAGGACGAGGAGGAGGACGATGTTAATGCCACGGCTTCGCAAGGCCGGC
TGGTCCATACGAAGGAACAAGCGGAGCTGGTGCGTCGGGCGTTTGCGTCC
GTGGATGTAGAAGAGGATTTTGCGAAAGAGAAGGCTGACGCAGTGGCGGC
TGAGGAGGAGGAAGCGGAGGCAGCCGCCGCGATGAAGAAAGGAGGGAAGA
AGGGAAGGGGAGGAGCGGCGAAGGCGAATGAGGTGGCAGGGTGGGGGAAT
TGGGCGGGGATGGGTGCACCGGCATTGCCCCCTCCGCCACCGCCCTCGGG
CCGCCGCATACCTGGTACTGGTGGTGGTGGTGCTGCTGGTGGTGGTGGTG
GTGGGGGCAGTAAGGGGGGAATGCCTGCTGCGGCCGCGTACGCCAGCAGC
AGCACCACCAGTACCACCAGCACCACCAGTAGCATCGACAAGGCGCTGAC
CAAGCCGAGGTTAGATCGTTCATTGCCTACAGTTGTGATTAATGAACGAA
GAATGAAGAAGGCGGCGGCGTTGAAAGTGACGGAGGTTCCTTATCCTTTC
ACTTCCAAGGAGCAGTACGAAAGGAGTTTGAGGCGGCCAGTGGGCAAGGA
GTGGAACACGGCTTTGGCTGTGCGGGAGATGACACGGCCAGCTGTGAAGG
TGAGGGCAGGTGTGATGGTACAACCGATAAAATTGCGCAAGACGCATCGG
GCGGTGTTTTCGGGgtaggttttgtatggtgtgtgagagattgggatggg
gatgttggagaaaaggggaaggtacagaggcgaaaagagaaagagagcgg
tgatgagggactggacaaaaaaatagagagcgaaagcataagatatctaa
gtgaacgggccaaaacttgccgggggagaggaacagaagaaacctgtgct
tgttatttcccttcccctcctctatgttccctaccgccctcgctgaacgg
cactgcaacgcctcaacgcttcagtaggcacgcatgcccatcctttgctt
tcatgaagctttcgtaccgtttgttctgcctgaccaataaggggaaaatg
cgggggactcggtgcttggacatcggggccagtctgtggacctccgagtc
cgagcaacaagtctttctcgtcatcgttctcttccgacccgctgagcccc
aaaatgaaatgggctctcacgtctgaccctttgcgcccggacccagcatt
cctaacacgtaacctcagcccttccgttcactgcataatcatcaggaaga
cgatcaggatcttggctggccatgagtctcacatttcgggggcaccacag
catcacacgattcaaattccttcccttccccctccacactccacagCACA
GCCAAGCCAAACAAGCCGCCTGAGAGCATGGCTGACAGTGGGATGCGTCG
GCGCGCGCCCGTGgtaagacttaaaatttcctccttgtcagatctgcatt
tcttcccttcctgctttcatctcttcatctcacgcatcatcatcatcact
attgctcaacgcacctagGGTGCTGGCGCCTGGGGCCAGGACACAGACAA
ACCCAAGGCCCCCATGGCATCTGCCAAGgtatgtatgacacgggcattct
ttccacccatctgttttaatatttctctccctcttttccagtgtctctcg
tgacaaaagcgctcgcaagcaagccattcctacgttgccccccctctctc
catcctcctccatttgctcacatctcccttccccaactcttttcagGTCC
TCGAGCGCATGGACGTATTTACGAAATTTCACGACGAGGATAAGGTGCAG
ACCTCGCGCGGGGCGACCATGGCCCTCTTCTCTTGGATCTTGGTACTCGT
CCTTGTGTGCTCCGAAACATACGAGTTTATGgtaagaaagatgtacaaga
atggataaaggggaacctgatcctagacatcaaccattgccctccctccc
tccctccctccctccctccctcccctctctctagACTGCGCCCACCAAGG
AGCACTTGGTCGTGGACACTTCCCTGGGCGAAAAGCTTAATATTACCATT
GACCTGACATTCCATGCCTTGACCTGCGCTGgtgaggagggagggaggaa
ggaagggagggagggagggagggagggaagggtagagaagacggagatct
gtcgctctcttggcgaagggcgaaggattagttctcacctccccccctcc
ctccccccctccctccctccctccctccctccctccctccctcagATGTG
CACGTGGACGCCATGGACGTGGCAGGAGACAATCAGATGCAGGTCGAGCA
CAACATGTTGAAGCAGCGACTGTCGGCAGAGGGGCAGCCCATCGGgtatg
ggagggaggggaggaggggagggaggaaaggactggactgagtgcgaaag
cgcatttccaatcaattatcacatcttcgctccacgtgtcctcttcctcc
cttttatccttcctcccttcctccctcagTTTTCCCTTTCTGGAGGACCC
CACCGACTTTGAGAGCAAAAGGGCGGGCGCGCTCGCGGCTGCCTCTCCCT
CGGACTACTGTGGATCCTGCTTCGACGCCTCCACCGCCCGTGGCAAGGAT
AAAGGTGCTTCTCCCTCGTGCTGCAATTCGTGCGAGGACGTCCTGGCGGC
GTATCGATCGCAGCGTTTGGCCCTGGGGAGGATCAAgtgagcaagggagg
gggggagaggagaagaaagggcgagggagggagggaaggagccgtgtctt
tcgttgggacatcacgccgaggtgaagcaacggcagcctcttctcaaatc
ccctcccctcccctcccctcccttcctctcacagGAGCACCGCCCCCCAG
TGCCAGCCCGGCTTCAAAGTCCCTGTCTCTGTAGGGCCTATGCAGAAGGG
CGAGGGATGCAACCTCAACGGCTTCATGTCCGTTAACAAGGTGGCAGGCA
ACTTTCACATCGCCTTTGGAGACTCGGTCGTCAAGgtacatgcgtgtccc
tctccctccctccctcctcccctccctcccgccctccctcctctcccttc
tctttggtgactctggttgacctctccctccctcccttcctcctttcctg
tatcagGATGGCCGACACATACACCAATTCATTCCATCCGAGGCCCCCTT
CTTCAACGTCTCCCACTCCATCTCCCACATCTCTTTTGGGGACGAGTACC
CTGGGCGCGTCAACCCCCTCGATGGGAAGGTCAAGgtagggagggaggga
ggaaaggagggaaggagggagggaggaaaagagggagggagggaaggaca
aagggtagctccacgagatacacagacagatttgcgttcagacgaccctt
catgttattcacattctcacctacctacctacctacctacctacctccct
ccctccctccctccctccctagTACGTGAGCCAAGAATTGGGCACGGGCC
TGTTCCAGTACTTCATCAAGgtcaggaattaaaagtgacaaggaggggaa
agggaaggaggaagggaaggagatagagatagagagattccaagaaggta
aaacgcccgtcccacatgcactcatccatcttccccttcctcctttcctc
cctcgccacctcgcgctagGTCATCCCTACCAACTACAAAGGCCGGAAGG
GTAATGTCATCCGAACCAATCGCATCAGTGTCACAGAGCGCTTTAAGCCC
CTTCATAAGGAAGGCGAAGTCAGGTTGGAGGGAGACAGTCACGCACACGC
TGACCAGACCTCGGTGCTGCCCGGGGTATTCTTTATTTACGATTTGAGCC
CGTTTAACGTGGAGGTATCGACCGTTACCACGCCGTTTAGCCATTTCGTC
GTTAAGgtgagtaggtggatgcagagggggtgggtggagggatgagcggg
agacgtgtgctgaagtgtgttgcttcctggtcgtaatgtcggtcttcctc
ctttttctctttccttcccctcatacccccacacactctctctctcacac
gcacacagTTATGTGCCATTGCCGGCGGCGTCTTCTCCATTTCCCGCTTA
CTTGACAACTTCTTCTACTACTCCGGTGTGTTTTTGGGTAAAGGCACAGG
CTTCCTGGCCGGGACTCCCAGATGA
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protein sequence of NO03G05330.1

>NO03G05330.1-protein ID=NO03G05330.1-protein|Name=NO03G05330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=804bp
MAGGGREGEGEEEEEEGDSNPWMVAQGSFRSASEGAAGKRRTRRSSTSSS
SSSRSLLDVQRAVEAVMQEVDGGEEDMVEESATGTTTTTGGKRKRGKRGG
KGKGGSSSMIAGAEGEEEDEEEDDVNATASQGRLVHTKEQAELVRRAFAS
VDVEEDFAKEKADAVAAEEEEAEAAAAMKKGGKKGRGGAAKANEVAGWGN
WAGMGAPALPPPPPPSGRRIPGTGGGGAAGGGGGGGSKGGMPAAAAYASS
STTSTTSTTSSIDKALTKPRLDRSLPTVVINERRMKKAAALKVTEVPYPF
TSKEQYERSLRRPVGKEWNTALAVREMTRPAVKVRAGVMVQPIKLRKTHR
AVFSGTAKPNKPPESMADSGMRRRAPVGAGAWGQDTDKPKAPMASAKVLE
RMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMTAPTKEHL
VVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRL
SAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKG
ASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGE
GCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSIS
HISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVI
RTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNV
EVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSGVFLGKGTGFLAG
TPR*
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Synonyms
Publications