NO03G05330.1, NO03G05330.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G05330.1
Unique Name	NO03G05330.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2412
Alignment location	chr3:1519565..1524039 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:1519565..1524039 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G05330.1 vs.
Match: EWM29979.1 (protein of unknown function DUF1692 [Nannochloropsis gaditana])

HSP 1 Score: 746.5 bits (1926), Expect = 8.600e-212
Identity = 361/439 (82.23%), Postives = 394/439 (89.75%), Query Frame = 0

Query:  366 MADSGMRRRAPVGAGAWGQDTDKPKAPMASAKVLERMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYE-FMTAPTKEHLVVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKGASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGEGCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSISHISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVIRTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNVEVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSGVFLGKGTGFLAGTPR 804
            M +SGMRRRAP+ AGAWG D DKPKAP+ASAKVLERMDVFTKFHDEDK+QTSRGA+MALFSW+LVLVL+CSE YE F+T+ TKEHLVVDTSLG+KLNIT+D+TFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLS++G+ IGFPFLEDPTDF+SK+A AL  A+P DYCGSCF A T  G       +CCNSC+D+  AY +Q L +G+IK+TAPQC PGF+ P   GPMQKGEGCNL GFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSH+I H+SFGDEYPGRVNPLDGKVKYVS  +GTGLFQYFIKVIPT+YKGR G  IRTNRISVTERFKPLHKEGE RL GDSHAH DQTSVLPGVFFIYDLSPFNVEVSTV+ PFSHF+VKLCAIAGGVFSISRLLDN FYYSG+FLGKGTGFLAGTPR
Sbjct:    1 MTESGMRRRAPMNAGAWGADADKPKAPIASAKVLERMDVFTKFHDEDKIQTSRGASMALFSWVLVLVLLCSEAYEAFLTSRTKEHLVVDTSLGDKLNITLDMTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSSQGERIGFPFLEDPTDFDSKKADALLGAAPWDYCGSCFQARTHTG-------ACCNSCQDLEQAYLTQGLPMGKIKTTAPQCLPGFQAPAPSGPMQKGEGCNLKGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHTIQHVSFGDEYPGRVNPLDGKVKYVSSTVGTGLFQYFIKVIPTHYKGRAGEAIRTNRISVTERFKPLHKEGEARLTGDSHAHNDQTSVLPGVFFIYDLSPFNVEVSTVSVPFSHFLVKLCAIAGGVFSISRLLDNVFYYSGLFLGKGTGFLAGTPR 432

The following BLAST results are available for this feature:

BLAST of NO03G05330.1 vs.

BLAST of NO03G05330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29979.1	8.600e-212	82.23	protein of unknown function DUF1692 [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G05330	NO03G05330	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G05330.1	NO03G05330.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G05330.1.cds1	NO03G05330.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds2	NO03G05330.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds3	NO03G05330.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds4	NO03G05330.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds5	NO03G05330.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds6	NO03G05330.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds7	NO03G05330.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds8	NO03G05330.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds9	NO03G05330.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds10	NO03G05330.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds11	NO03G05330.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G05330.1.cds12	NO03G05330.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:1519565..1524039+
coding sequence from alignment at chr3:1519565..1524039+

mRNA sequence

>NO03G05330.1 ID=NO03G05330.1|Name=NO03G05330.1|organism=Nannochloropsis oceanica|type=mRNA|length=2412bp
ATGGCGGGGGGAGGGAGGGAGGGGGAGGGCGAGGAGGAGGAGGAGGAGGG
AGATTCGAATCCCTGGATGGTGGCACAAGGGAGTTTCCGGTCAGCGAGTG
AGGGCGCGGCGGGGAAGCGGCGAACACGCCGGAGCAGTACCAGCAGCAGC
AGCAGCAGCAGGAGTCTGCTGGATGTCCAGCGGGCGGTGGAGGCAGTGAT
GCAGGAGGTGGACGGCGGGGAGGAGGATATGGTGGAAGAGAGTGCAACTG
GCACCACCACCACTACAGGGGGTAAGAGGAAGAGGGGAAAGAGGGGAGGG
AAGGGTAAGGGTGGTTCCTCTTCCATGATTGCGGGAGCTGAGGGCGAGGA
GGAGGACGAGGAGGAGGACGATGTTAATGCCACGGCTTCGCAAGGCCGGC
TGGTCCATACGAAGGAACAAGCGGAGCTGGTGCGTCGGGCGTTTGCGTCC
GTGGATGTAGAAGAGGATTTTGCGAAAGAGAAGGCTGACGCAGTGGCGGC
TGAGGAGGAGGAAGCGGAGGCAGCCGCCGCGATGAAGAAAGGAGGGAAGA
AGGGAAGGGGAGGAGCGGCGAAGGCGAATGAGGTGGCAGGGTGGGGGAAT
TGGGCGGGGATGGGTGCACCGGCATTGCCCCCTCCGCCACCGCCCTCGGG
CCGCCGCATACCTGGTACTGGTGGTGGTGGTGCTGCTGGTGGTGGTGGTG
GTGGGGGCAGTAAGGGGGGAATGCCTGCTGCGGCCGCGTACGCCAGCAGC
AGCACCACCAGTACCACCAGCACCACCAGTAGCATCGACAAGGCGCTGAC
CAAGCCGAGGTTAGATCGTTCATTGCCTACAGTTGTGATTAATGAACGAA
GAATGAAGAAGGCGGCGGCGTTGAAAGTGACGGAGGTTCCTTATCCTTTC
ACTTCCAAGGAGCAGTACGAAAGGAGTTTGAGGCGGCCAGTGGGCAAGGA
GTGGAACACGGCTTTGGCTGTGCGGGAGATGACACGGCCAGCTGTGAAGG
TGAGGGCAGGTGTGATGGTACAACCGATAAAATTGCGCAAGACGCATCGG
GCGGTGTTTTCGGGCACAGCCAAGCCAAACAAGCCGCCTGAGAGCATGGC
TGACAGTGGGATGCGTCGGCGCGCGCCCGTGGGTGCTGGCGCCTGGGGCC
AGGACACAGACAAACCCAAGGCCCCCATGGCATCTGCCAAGGTCCTCGAG
CGCATGGACGTATTTACGAAATTTCACGACGAGGATAAGGTGCAGACCTC
GCGCGGGGCGACCATGGCCCTCTTCTCTTGGATCTTGGTACTCGTCCTTG
TGTGCTCCGAAACATACGAGTTTATGACTGCGCCCACCAAGGAGCACTTG
GTCGTGGACACTTCCCTGGGCGAAAAGCTTAATATTACCATTGACCTGAC
ATTCCATGCCTTGACCTGCGCTGATGTGCACGTGGACGCCATGGACGTGG
CAGGAGACAATCAGATGCAGGTCGAGCACAACATGTTGAAGCAGCGACTG
TCGGCAGAGGGGCAGCCCATCGGTTTTCCCTTTCTGGAGGACCCCACCGA
CTTTGAGAGCAAAAGGGCGGGCGCGCTCGCGGCTGCCTCTCCCTCGGACT
ACTGTGGATCCTGCTTCGACGCCTCCACCGCCCGTGGCAAGGATAAAGGT
GCTTCTCCCTCGTGCTGCAATTCGTGCGAGGACGTCCTGGCGGCGTATCG
ATCGCAGCGTTTGGCCCTGGGGAGGATCAAGAGCACCGCCCCCCAGTGCC
AGCCCGGCTTCAAAGTCCCTGTCTCTGTAGGGCCTATGCAGAAGGGCGAG
GGATGCAACCTCAACGGCTTCATGTCCGTTAACAAGGTGGCAGGCAACTT
TCACATCGCCTTTGGAGACTCGGTCGTCAAGGATGGCCGACACATACACC
AATTCATTCCATCCGAGGCCCCCTTCTTCAACGTCTCCCACTCCATCTCC
CACATCTCTTTTGGGGACGAGTACCCTGGGCGCGTCAACCCCCTCGATGG
GAAGGTCAAGTACGTGAGCCAAGAATTGGGCACGGGCCTGTTCCAGTACT
TCATCAAGGTCATCCCTACCAACTACAAAGGCCGGAAGGGTAATGTCATC
CGAACCAATCGCATCAGTGTCACAGAGCGCTTTAAGCCCCTTCATAAGGA
AGGCGAAGTCAGGTTGGAGGGAGACAGTCACGCACACGCTGACCAGACCT
CGGTGCTGCCCGGGGTATTCTTTATTTACGATTTGAGCCCGTTTAACGTG
GAGGTATCGACCGTTACCACGCCGTTTAGCCATTTCGTCGTTAAGTTATG
TGCCATTGCCGGCGGCGTCTTCTCCATTTCCCGCTTACTTGACAACTTCT
TCTACTACTCCGGTGTGTTTTTGGGTAAAGGCACAGGCTTCCTGGCCGGG
ACTCCCAGATGA

protein sequence of NO03G05330.1

>NO03G05330.1-protein ID=NO03G05330.1-protein|Name=NO03G05330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=804bp
MAGGGREGEGEEEEEEGDSNPWMVAQGSFRSASEGAAGKRRTRRSSTSSS
SSSRSLLDVQRAVEAVMQEVDGGEEDMVEESATGTTTTTGGKRKRGKRGG
KGKGGSSSMIAGAEGEEEDEEEDDVNATASQGRLVHTKEQAELVRRAFAS
VDVEEDFAKEKADAVAAEEEEAEAAAAMKKGGKKGRGGAAKANEVAGWGN
WAGMGAPALPPPPPPSGRRIPGTGGGGAAGGGGGGGSKGGMPAAAAYASS
STTSTTSTTSSIDKALTKPRLDRSLPTVVINERRMKKAAALKVTEVPYPF
TSKEQYERSLRRPVGKEWNTALAVREMTRPAVKVRAGVMVQPIKLRKTHR
AVFSGTAKPNKPPESMADSGMRRRAPVGAGAWGQDTDKPKAPMASAKVLE
RMDVFTKFHDEDKVQTSRGATMALFSWILVLVLVCSETYEFMTAPTKEHL
VVDTSLGEKLNITIDLTFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRL
SAEGQPIGFPFLEDPTDFESKRAGALAAASPSDYCGSCFDASTARGKDKG
ASPSCCNSCEDVLAAYRSQRLALGRIKSTAPQCQPGFKVPVSVGPMQKGE
GCNLNGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHSIS
HISFGDEYPGRVNPLDGKVKYVSQELGTGLFQYFIKVIPTNYKGRKGNVI
RTNRISVTERFKPLHKEGEVRLEGDSHAHADQTSVLPGVFFIYDLSPFNV
EVSTVTTPFSHFVVKLCAIAGGVFSISRLLDNFFYYSGVFLGKGTGFLAG
TPR*

mRNA from alignment at chr3:1519565..1524039+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G05330.1 ID=NO03G05330.1|Name=NO03G05330.1|organism=Nannochloropsis oceanica|type=mRNA|length=4475bp|location=Sequence derived from alignment at chr3:1519565..1524039+ (Nannochloropsis oceanica)
ATGGCGGGGGGAGGGAGGGAGGGGGAGGGCGAGGAGGAGGAGGAGGAGGG
AGATTCGAATCCCTGGATGGTGGCACAAGGGAGTTTCCGGTCAGCGAGTG
AGGGCGCGGCGGGGAAGCGGCGAACACGCCGGAGCAGTACCAGCAGCAGC
AGCAGCAGCAGGAGTCTGCTGGATGTCCAGCGGGCGGTGGAGGCAGTGAT
GCAGGAGGTGGACGGCGGGGAGGAGGATATGGTGGAAGAGAGTGCAACTG
GCACCACCACCACTACAGGGGGTAAGAGGAAGAGGGGAAAGAGGGGAGGG
AAGGGTAAGGGTGGTTCCTCTTCCATGATTGCGGGAGCTGAGGGCGAGGA
GGAGGACGAGGAGGAGGACGATGTTAATGCCACGGCTTCGCAAGGCCGGC
TGGTCCATACGAAGGAACAAGCGGAGCTGGTGCGTCGGGCGTTTGCGTCC
GTGGATGTAGAAGAGGATTTTGCGAAAGAGAAGGCTGACGCAGTGGCGGC
TGAGGAGGAGGAAGCGGAGGCAGCCGCCGCGATGAAGAAAGGAGGGAAGA
AGGGAAGGGGAGGAGCGGCGAAGGCGAATGAGGTGGCAGGGTGGGGGAAT
TGGGCGGGGATGGGTGCACCGGCATTGCCCCCTCCGCCACCGCCCTCGGG
CCGCCGCATACCTGGTACTGGTGGTGGTGGTGCTGCTGGTGGTGGTGGTG
GTGGGGGCAGTAAGGGGGGAATGCCTGCTGCGGCCGCGTACGCCAGCAGC
AGCACCACCAGTACCACCAGCACCACCAGTAGCATCGACAAGGCGCTGAC
CAAGCCGAGGTTAGATCGTTCATTGCCTACAGTTGTGATTAATGAACGAA
GAATGAAGAAGGCGGCGGCGTTGAAAGTGACGGAGGTTCCTTATCCTTTC
ACTTCCAAGGAGCAGTACGAAAGGAGTTTGAGGCGGCCAGTGGGCAAGGA
GTGGAACACGGCTTTGGCTGTGCGGGAGATGACACGGCCAGCTGTGAAGG
TGAGGGCAGGTGTGATGGTACAACCGATAAAATTGCGCAAGACGCATCGG
GCGGTGTTTTCGGGGTAGGTTTTGTATGGTGTGTGAGAGATTGGGATGGG
GATGTTGGAGAAAAGGGGAAGGTACAGAGGCGAAAAGAGAAAGAGAGCGG
TGATGAGGGACTGGACAAAAAAATAGAGAGCGAAAGCATAAGATATCTAA
GTGAACGGGCCAAAACTTGCCGGGGGAGAGGAACAGAAGAAACCTGTGCT
TGTTATTTCCCTTCCCCTCCTCTATGTTCCCTACCGCCCTCGCTGAACGG
CACTGCAACGCCTCAACGCTTCAGTAGGCACGCATGCCCATCCTTTGCTT
TCATGAAGCTTTCGTACCGTTTGTTCTGCCTGACCAATAAGGGGAAAATG
CGGGGGACTCGGTGCTTGGACATCGGGGCCAGTCTGTGGACCTCCGAGTC
CGAGCAACAAGTCTTTCTCGTCATCGTTCTCTTCCGACCCGCTGAGCCCC
AAAATGAAATGGGCTCTCACGTCTGACCCTTTGCGCCCGGACCCAGCATT
CCTAACACGTAACCTCAGCCCTTCCGTTCACTGCATAATCATCAGGAAGA
CGATCAGGATCTTGGCTGGCCATGAGTCTCACATTTCGGGGGCACCACAG
CATCACACGATTCAAATTCCTTCCCTTCCCCCTCCACACTCCACAGCACA
GCCAAGCCAAACAAGCCGCCTGAGAGCATGGCTGACAGTGGGATGCGTCG
GCGCGCGCCCGTGGTAAGACTTAAAATTTCCTCCTTGTCAGATCTGCATT
TCTTCCCTTCCTGCTTTCATCTCTTCATCTCACGCATCATCATCATCACT
ATTGCTCAACGCACCTAGGGTGCTGGCGCCTGGGGCCAGGACACAGACAA
ACCCAAGGCCCCCATGGCATCTGCCAAGGTATGTATGACACGGGCATTCT
TTCCACCCATCTGTTTTAATATTTCTCTCCCTCTTTTCCAGTGTCTCTCG
TGACAAAAGCGCTCGCAAGCAAGCCATTCCTACGTTGCCCCCCCTCTCTC
CATCCTCCTCCATTTGCTCACATCTCCCTTCCCCAACTCTTTTCAGGTCC
TCGAGCGCATGGACGTATTTACGAAATTTCACGACGAGGATAAGGTGCAG
ACCTCGCGCGGGGCGACCATGGCCCTCTTCTCTTGGATCTTGGTACTCGT
CCTTGTGTGCTCCGAAACATACGAGTTTATGGTAAGAAAGATGTACAAGA
ATGGATAAAGGGGAACCTGATCCTAGACATCAACCATTGCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCCTCTCTCTAGACTGCGCCCACCAAGG
AGCACTTGGTCGTGGACACTTCCCTGGGCGAAAAGCTTAATATTACCATT
GACCTGACATTCCATGCCTTGACCTGCGCTGGTGAGGAGGGAGGGAGGAA
GGAAGGGAGGGAGGGAGGGAGGGAGGGAAGGGTAGAGAAGACGGAGATCT
GTCGCTCTCTTGGCGAAGGGCGAAGGATTAGTTCTCACCTCCCCCCCTCC
CTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGATGTG
CACGTGGACGCCATGGACGTGGCAGGAGACAATCAGATGCAGGTCGAGCA
CAACATGTTGAAGCAGCGACTGTCGGCAGAGGGGCAGCCCATCGGGTATG
GGAGGGAGGGGAGGAGGGGAGGGAGGAAAGGACTGGACTGAGTGCGAAAG
CGCATTTCCAATCAATTATCACATCTTCGCTCCACGTGTCCTCTTCCTCC
CTTTTATCCTTCCTCCCTTCCTCCCTCAGTTTTCCCTTTCTGGAGGACCC
CACCGACTTTGAGAGCAAAAGGGCGGGCGCGCTCGCGGCTGCCTCTCCCT
CGGACTACTGTGGATCCTGCTTCGACGCCTCCACCGCCCGTGGCAAGGAT
AAAGGTGCTTCTCCCTCGTGCTGCAATTCGTGCGAGGACGTCCTGGCGGC
GTATCGATCGCAGCGTTTGGCCCTGGGGAGGATCAAGTGAGCAAGGGAGG
GGGGGAGAGGAGAAGAAAGGGCGAGGGAGGGAGGGAAGGAGCCGTGTCTT
TCGTTGGGACATCACGCCGAGGTGAAGCAACGGCAGCCTCTTCTCAAATC
CCCTCCCCTCCCCTCCCCTCCCTTCCTCTCACAGGAGCACCGCCCCCCAG
TGCCAGCCCGGCTTCAAAGTCCCTGTCTCTGTAGGGCCTATGCAGAAGGG
CGAGGGATGCAACCTCAACGGCTTCATGTCCGTTAACAAGGTGGCAGGCA
ACTTTCACATCGCCTTTGGAGACTCGGTCGTCAAGGTACATGCGTGTCCC
TCTCCCTCCCTCCCTCCTCCCCTCCCTCCCGCCCTCCCTCCTCTCCCTTC
TCTTTGGTGACTCTGGTTGACCTCTCCCTCCCTCCCTTCCTCCTTTCCTG
TATCAGGATGGCCGACACATACACCAATTCATTCCATCCGAGGCCCCCTT
CTTCAACGTCTCCCACTCCATCTCCCACATCTCTTTTGGGGACGAGTACC
CTGGGCGCGTCAACCCCCTCGATGGGAAGGTCAAGGTAGGGAGGGAGGGA
GGAAAGGAGGGAAGGAGGGAGGGAGGAAAAGAGGGAGGGAGGGAAGGACA
AAGGGTAGCTCCACGAGATACACAGACAGATTTGCGTTCAGACGACCCTT
CATGTTATTCACATTCTCACCTACCTACCTACCTACCTACCTACCTCCCT
CCCTCCCTCCCTCCCTCCCTAGTACGTGAGCCAAGAATTGGGCACGGGCC
TGTTCCAGTACTTCATCAAGGTCAGGAATTAAAAGTGACAAGGAGGGGAA
AGGGAAGGAGGAAGGGAAGGAGATAGAGATAGAGAGATTCCAAGAAGGTA
AAACGCCCGTCCCACATGCACTCATCCATCTTCCCCTTCCTCCTTTCCTC
CCTCGCCACCTCGCGCTAGGTCATCCCTACCAACTACAAAGGCCGGAAGG
GTAATGTCATCCGAACCAATCGCATCAGTGTCACAGAGCGCTTTAAGCCC
CTTCATAAGGAAGGCGAAGTCAGGTTGGAGGGAGACAGTCACGCACACGC
TGACCAGACCTCGGTGCTGCCCGGGGTATTCTTTATTTACGATTTGAGCC
CGTTTAACGTGGAGGTATCGACCGTTACCACGCCGTTTAGCCATTTCGTC
GTTAAGGTGAGTAGGTGGATGCAGAGGGGGTGGGTGGAGGGATGAGCGGG
AGACGTGTGCTGAAGTGTGTTGCTTCCTGGTCGTAATGTCGGTCTTCCTC
CTTTTTCTCTTTCCTTCCCCTCATACCCCCACACACTCTCTCTCTCACAC
GCACACAGTTATGTGCCATTGCCGGCGGCGTCTTCTCCATTTCCCGCTTA
CTTGACAACTTCTTCTACTACTCCGGTGTGTTTTTGGGTAAAGGCACAGG
CTTCCTGGCCGGGACTCCCAGATGA

Coding sequence (CDS) from alignment at chr3:1519565..1524039+

>NO03G05330.1 ID=NO03G05330.1|Name=NO03G05330.1|organism=Nannochloropsis oceanica|type=CDS|length=2412bp|location=Sequence derived from alignment at chr3:1519565..1524039+ (Nannochloropsis oceanica)
ATGGCGGGGGGAGGGAGGGAGGGGGAGGGCGAGGAGGAGGAGGAGGAGGG
AGATTCGAATCCCTGGATGGTGGCACAAGGGAGTTTCCGGTCAGCGAGTG
AGGGCGCGGCGGGGAAGCGGCGAACACGCCGGAGCAGTACCAGCAGCAGC
AGCAGCAGCAGGAGTCTGCTGGATGTCCAGCGGGCGGTGGAGGCAGTGAT
GCAGGAGGTGGACGGCGGGGAGGAGGATATGGTGGAAGAGAGTGCAACTG
GCACCACCACCACTACAGGGGGTAAGAGGAAGAGGGGAAAGAGGGGAGGG
AAGGGTAAGGGTGGTTCCTCTTCCATGATTGCGGGAGCTGAGGGCGAGGA
GGAGGACGAGGAGGAGGACGATGTTAATGCCACGGCTTCGCAAGGCCGGC
TGGTCCATACGAAGGAACAAGCGGAGCTGGTGCGTCGGGCGTTTGCGTCC
GTGGATGTAGAAGAGGATTTTGCGAAAGAGAAGGCTGACGCAGTGGCGGC
TGAGGAGGAGGAAGCGGAGGCAGCCGCCGCGATGAAGAAAGGAGGGAAGA
AGGGAAGGGGAGGAGCGGCGAAGGCGAATGAGGTGGCAGGGTGGGGGAAT
TGGGCGGGGATGGGTGCACCGGCATTGCCCCCTCCGCCACCGCCCTCGGG
CCGCCGCATACCTGGTACTGGTGGTGGTGGTGCTGCTGGTGGTGGTGGTG
GTGGGGGCAGTAAGGGGGGAATGCCTGCTGCGGCCGCGTACGCCAGCAGC
AGCACCACCAGTACCACCAGCACCACCAGTAGCATCGACAAGGCGCTGAC
CAAGCCGAGGTTAGATCGTTCATTGCCTACAGTTGTGATTAATGAACGAA
GAATGAAGAAGGCGGCGGCGTTGAAAGTGACGGAGGTTCCTTATCCTTTC
ACTTCCAAGGAGCAGTACGAAAGGAGTTTGAGGCGGCCAGTGGGCAAGGA
GTGGAACACGGCTTTGGCTGTGCGGGAGATGACACGGCCAGCTGTGAAGG
TGAGGGCAGGTGTGATGGTACAACCGATAAAATTGCGCAAGACGCATCGG
GCGGTGTTTTCGGGCACAGCCAAGCCAAACAAGCCGCCTGAGAGCATGGC
TGACAGTGGGATGCGTCGGCGCGCGCCCGTGGGTGCTGGCGCCTGGGGCC
AGGACACAGACAAACCCAAGGCCCCCATGGCATCTGCCAAGGTCCTCGAG
CGCATGGACGTATTTACGAAATTTCACGACGAGGATAAGGTGCAGACCTC
GCGCGGGGCGACCATGGCCCTCTTCTCTTGGATCTTGGTACTCGTCCTTG
TGTGCTCCGAAACATACGAGTTTATGACTGCGCCCACCAAGGAGCACTTG
GTCGTGGACACTTCCCTGGGCGAAAAGCTTAATATTACCATTGACCTGAC
ATTCCATGCCTTGACCTGCGCTGATGTGCACGTGGACGCCATGGACGTGG
CAGGAGACAATCAGATGCAGGTCGAGCACAACATGTTGAAGCAGCGACTG
TCGGCAGAGGGGCAGCCCATCGGTTTTCCCTTTCTGGAGGACCCCACCGA
CTTTGAGAGCAAAAGGGCGGGCGCGCTCGCGGCTGCCTCTCCCTCGGACT
ACTGTGGATCCTGCTTCGACGCCTCCACCGCCCGTGGCAAGGATAAAGGT
GCTTCTCCCTCGTGCTGCAATTCGTGCGAGGACGTCCTGGCGGCGTATCG
ATCGCAGCGTTTGGCCCTGGGGAGGATCAAGAGCACCGCCCCCCAGTGCC
AGCCCGGCTTCAAAGTCCCTGTCTCTGTAGGGCCTATGCAGAAGGGCGAG
GGATGCAACCTCAACGGCTTCATGTCCGTTAACAAGGTGGCAGGCAACTT
TCACATCGCCTTTGGAGACTCGGTCGTCAAGGATGGCCGACACATACACC
AATTCATTCCATCCGAGGCCCCCTTCTTCAACGTCTCCCACTCCATCTCC
CACATCTCTTTTGGGGACGAGTACCCTGGGCGCGTCAACCCCCTCGATGG
GAAGGTCAAGTACGTGAGCCAAGAATTGGGCACGGGCCTGTTCCAGTACT
TCATCAAGGTCATCCCTACCAACTACAAAGGCCGGAAGGGTAATGTCATC
CGAACCAATCGCATCAGTGTCACAGAGCGCTTTAAGCCCCTTCATAAGGA
AGGCGAAGTCAGGTTGGAGGGAGACAGTCACGCACACGCTGACCAGACCT
CGGTGCTGCCCGGGGTATTCTTTATTTACGATTTGAGCCCGTTTAACGTG
GAGGTATCGACCGTTACCACGCCGTTTAGCCATTTCGTCGTTAAGTTATG
TGCCATTGCCGGCGGCGTCTTCTCCATTTCCCGCTTACTTGACAACTTCT
TCTACTACTCCGGTGTGTTTTTGGGTAAAGGCACAGGCTTCCTGGCCGGG
ACTCCCAGATGA

Synonyms

Publications