NO03G04470, NO03G04470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04470 vs. NCBI_GenBank
Match: EWM29879.1 (cytochrome b5 [Nannochloropsis gaditana]) HSP 1 Score: 212.2 bits (539), Expect = 2.500e-51 Identity = 142/349 (40.69%), Postives = 187/349 (53.58%), Query Frame = 0 Query: 7 DFVGVLVALMVLAGWAALSNIFFGHQTFFRRSSEGGQEDEEASFNAHNCLPTLPGPDIVPQAPAPTYTEPPSTPDRLQALLPQDLVSTEVLTFLSPYDVTLVLPVCQFLNTTGEQPACWNEASRRSTAAWIRRLDMPSTVEEGGKEIKRGWELGERESPKLEFFRRMFLFPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMR-EYLLWDPSRALGRAGTIRGLF--------YADPSPVSSEHSSWKASFVHMPMIQSAIAFMGRQQRGPSQSLQTVTTGEDSRPKRRWLVDDRRVLYIRNFAGDKQPPNIVKIL 347 + +G++VAL+ L G +AL N+ FGH TFFR E +AS +P P P P P ++ PPS PDRL +P++L +EVL FLSPY+VT +LP ++ + GE W A R A + L G +E+ E +PKLEFFRRMF++PY+ H +C +IV GKVYDVT FL +HPGG LLE+ G VDATA FE+S HS VA+ M +YL+WDP+ LGR GTI GL A P+P S+ + +P + + + R RG T P+ LVDDRR L N GD+ PPNIVKIL Sbjct: 5 ELLGLVVALLALLGASALINVLFGHPTFFR---EADHLPSKAS---------VPFPP--PTFPTPVHSPPPSVPDRLPVHIPKELFVSEVLLFLSPYEVTRLLPTSRYFHLAGEHVTYWQHAWTRRLAGMRQPLKRRCEATRGPEELL----THECHNPKLEFFRRMFVYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYLMWDPTPCLGRGGTIAGLLNPSMWRSAAACPAPSPSQVAQGGRFEGLLPSLLVLLTDLQRFCRGHITRRPVGAT----LPR---LVDDRRHL---NGGGDRSPPNIVKIL 325
BLAST of NO03G04470 vs. NCBI_GenBank
Match: BAJ93859.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 78.6 bits (192), Expect = 4.400e-11 Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = 0 Query: 175 LFPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLLWDPSRALGRA----GTIRGLFYADPSPVSSEHSSWKASFVHMPMIQSAIAF 294 ++ + H R CW+I+ GKVYDVTP++ HPGG LL G DATA F+ HSD AK +MR+Y + + A A + ADP+P +S + + +P++ A+AF Sbjct: 7 VYSFPEVRKHSERQDCWLIISGKVYDVTPYMEEHPGGDEVLLACTGK-DATADFDDIGHSDAAKELMRQYCVGEVDAATVPAKLGCAVLPAKGAADPAPRASTGQLLQLA---LPLLLVAMAF 125
BLAST of NO03G04470 vs. NCBI_GenBank
Match: XP_021974204.1 (cytochrome b5-like [Helianthus annuus] >OTG21645.1 putative cytochrome b5-like heme/steroid binding domain-containing protein [Helianthus annuus]) HSP 1 Score: 78.6 bits (192), Expect = 4.400e-11 Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 0 Query: 184 HDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLLWDPSRALGRAGTIRGLFYADP-SPVSSEHSSWKASFVHM-----PMIQSAIAF 294 H+ CW+I++GKVYDVTPF+ HPGG+ LL G DAT FE HSD AK MM +Y + D L ++ I + YA P +P +S S + + P+ A+AF Sbjct: 14 HNQTQDCWLIIQGKVYDVTPFMEDHPGGSEVLLASTGK-DATDDFEDIGHSDDAKAMMDKYYIGD----LEKSYKIAPIHYAPPAAPTASADDKTSESIIKILQFLAPLFIFALAF 124
BLAST of NO03G04470 vs. NCBI_GenBank
Match: XP_020166229.1 (cytochrome b5-like [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 78.2 bits (191), Expect = 5.700e-11 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 175 LFPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLLWDPSRA 253 ++ +Q H R CW+I+ GKVYDVTPF+ HPGG LL G DATA FE HSD AK +M +Y + + A Sbjct: 7 VYSFQEVRKHSQRKDCWLIISGKVYDVTPFMEEHPGGDEVLLACTGK-DATADFEDIGHSDAAKELMPQYCIGEVDAA 83
BLAST of NO03G04470 vs. NCBI_GenBank
Match: EJU06455.1 (hypothetical protein DACRYDRAFT_19605 [Dacryopinax primogenitus]) HSP 1 Score: 77.8 bits (190), Expect = 7.500e-11 Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 0 Query: 175 LFPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLLWDPSRALGRA--GTIRGLFYADPSPVSSEHSSWKASFVHMPMIQSAIA 293 L YQ + HDTR SCW++V+G++YDVT FL+ HPGGA +L HAG DATA + S+H A L + PS+ LG T+ +A + ++ + K + +P + I+ Sbjct: 71 LIAYQELQQHDTRESCWILVRGQIYDVTDFLAQHPGGALIILSHAGR-DATAAY--SSHHPPALLDN----ILSPSQHLGAVDPATLPPGHHASSAELTEDEQRVKQARAEIPPLNMCIS 183
BLAST of NO03G04470 vs. NCBI_GenBank
Match: XP_003626585.1 (cytochrome b5 [Medicago truncatula] >AES82803.1 cytochrome b5-like heme/steroid-binding domain protein [Medicago truncatula]) HSP 1 Score: 77.8 bits (190), Expect = 7.500e-11 Identity = 35/71 (49.30%), Postives = 43/71 (60.56%), Query Frame = 0 Query: 176 FPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLL 247 F + H+ +T CW+I+ GKVYDVTPFL HPGG +L+ G DAT FE HSD A MM EY + Sbjct: 9 FRFDEIAKHNNKTDCWIIINGKVYDVTPFLDDHPGGEESLISSTGK-DATVDFEDVGHSDSAIEMMHEYFV 78
BLAST of NO03G04470 vs. NCBI_GenBank
Match: EOX95625.1 (Cytochrome B5, n2,ATCB5-E,CB5-E, putative [Theobroma cacao]) HSP 1 Score: 77.4 bits (189), Expect = 9.700e-11 Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 175 LFPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLL 247 +F Y+ + RT CW+++ GKVYDVTPFL HPGG LL +G DAT FE HSD AK MM +Y + Sbjct: 7 VFAYEEVAKNKERTGCWLLISGKVYDVTPFLEEHPGGDEVLLAASGK-DATEDFEDVGHSDDAKQMMEKYYI 77
BLAST of NO03G04470 vs. NCBI_GenBank
Match: XP_007051468.2 (PREDICTED: cytochrome b5 [Theobroma cacao]) HSP 1 Score: 77.4 bits (189), Expect = 9.700e-11 Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 175 LFPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLL 247 +F Y+ + RT CW+++ GKVYDVTPFL HPGG LL +G DAT FE HSD AK MM +Y + Sbjct: 7 VFAYEEVAKNKERTGCWLLISGKVYDVTPFLEEHPGGDEVLLAASGK-DATEDFEDVGHSDDAKQMMEKYYI 77
BLAST of NO03G04470 vs. NCBI_GenBank
Match: XP_024508038.1 (Cytochrome b5 [Strongyloides ratti] >CEF68838.1 Cytochrome b5 [Strongyloides ratti]) HSP 1 Score: 77.0 bits (188), Expect = 1.300e-10 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 175 LFPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLLWD 249 ++ + + H T +SCW+I+ +V DVT FL HPGG LLEHAG+ DAT FE HS A+ M+ EY+L D Sbjct: 6 IYKREEVKEHTTASSCWIIINNQVLDVTKFLDEHPGGCEVLLEHAGN-DATEAFEDVGHSTDARQMLPEYILGD 78
BLAST of NO03G04470 vs. NCBI_GenBank
Match: KHJ49129.1 (cytochrome b5-like Heme/Steroid binding domain protein [Trichuris suis]) HSP 1 Score: 77.0 bits (188), Expect = 1.300e-10 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 0 Query: 164 SPKLEFFRRMFLFPYQSCEGHDTRTSCWVIVKGKVYDVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLL 247 SP L+ F R E H+ ++S W++++ KVYDVTPFL HPGG LLEHAG DAT FE + HS+ AK + +L+ Sbjct: 2 SPALKTFTR------SEVEAHNAKSSTWLVIENKVYDVTPFLEEHPGGIEVLLEHAGR-DATEGFEDAGHSNDAKEIRERFLV 77 The following BLAST results are available for this feature:
BLAST of NO03G04470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04470 ID=NO03G04470|Name=NO03G04470|organism=Nannochloropsis oceanica|type=gene|length=1954bpback to top protein sequence of NO03G04470.1 >NO03G04470.1-protein ID=NO03G04470.1-protein|Name=NO03G04470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=350bpback to top Synonyms
Publications
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