jgi.p|Nanoce1779_2|667543, gene_1650 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667543
Unique Namegene_1650
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1156560..1161389 +

Link to JBrowse

Properties
Property NameValue
TranscriptId667629
ProteinId667543
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1156560..1161389 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006506GPI anchor biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0020037heme binding
GO:0046914transition metal ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04470NO03G04470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667543mRNA_1650-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667543mRNA_1650Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667543

>mRNA_1650-protein ID=mRNA_1650-protein|Name=jgi.p|Nanoce1779_2|667543|organism=Nannochloropsis oceanica|type=polypeptide|length=805bp
MVEISPDFVGVLVALMVLAGWAALSNIFFGHQTFFRRSSEGGQEDEEASF
NAHNCLPTLPGPDIVPQAPAPTYTEPPSTPDRLQALLPQDLVSTEVLTFL
SPYDVTLVLPVCQFLNTTGEQPACWNEASRRSTAAWIRRLDMPSTVEEGG
KEIKRGWELGERESPKLEFFRRMFLFPYQSCEGHDTRTSCWVIVKGKQVY
DVTPFLSSHPGGAYTLLEHAGHVDATAFFEISNHSDVAKLMMREYLLWDP
SRALGRAGTIRGLFYADPSPVSSEHSSWKASFVHMPMIQSAIAFMGRQQR
GPSQSLQTVTTGEDSRPKPSDLATSQAPRRITIMEDEWSMVVLLEAILGL
LTYTIPALWQSREAAVFSAEADDPDYLPLPSRLWRLAGIISLASYTSTII
TRTEGFLNIGTEKVGEQTLRFLGGVILGTPYFYVSAVALGAPWKDMTDRT
AAWALMMGALVGGPLGAATSNLRQMRLPPLWQGPPGESALIRFRALGCCA
GAWVGAFFIPLDWAMPFQEWPLPLVVGAVAGHNLGALAFASRNTDEDNGD
DLFPPPLLNRRELFVPALLALGSATLLLSNTIQDVHRYDEIHKQLFAMLA
PASEAEEGRSGGQEQQQQPRRLRVLEIGVGEGVNVKYYPSGCEVIGLDPH
LKREALSVAQAKAKARKIEFSLIEGAAESLPFPDRSFDAVVSTLVFCSVQ
SPPRALREVARVLKKGGRFLFIEHVWAGEREHPVLHAVQQAVDPLQALLA
DGCHLIRRTDELFVGEARQGGRGGGLFERVEKIERLEVDTQWPITVQVAG
ILVK*
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Synonyms
Publications