NO03G04040, NO03G04040 (gene) Nannochloropsis oceanica

Overview
NameNO03G04040
Unique NameNO03G04040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2348
Alignment locationchr3:1177350..1179697 +

Link to JBrowse

Properties
Property NameValue
DescriptionEthylmalonic encephalopathy 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1177350..1179697 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Beta-lactamas-like
Homology
BLAST of NO03G04040 vs. NCBI_GenBank
Match: XP_005853535.1 (ethylmalonic encephalopathy 1 [Nannochloropsis gaditana CCMP526] >EKU22823.1 ethylmalonic encephalopathy 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 633.3 bits (1632), Expect = 6.100e-178
Identity = 309/415 (74.46%), Postives = 362/415 (87.23%), Query Frame = 0
Query:   46 SALAFLLKSPSSPVSLYAKALHITPFYPARSCSTTMTVSVAEITTAGKMSEAEASALSDKYKGVLYLATDTGVDKGIESNGFTSLKGLQARHIPVDVKNGLSLQLAADSLKALDELPAPTLVMCSTGGRASAVKCLKKAMEEGWTRDQALAHAESEKLPFVNNCNLRDWVLATVAAKQYMAEPPLIFRPLYEETSWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPGCKSMIAAVSGAKACVHLKPGDRVKFGTRYVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARLAGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGMMVS 461
            SA AF+  +P     +  K++    F  +R  S TMTV+ A+ITTAGK+ EAE SALSDKYK VLYLATD G DKGIE NGF SL+GL  RH+PVDVK+GLSLQLA D+L+ALDELPAP LV+CS+GGRASAV+CL+KA EEGWT+DQ LA+A   KLPFV N +L+DWVLATVAA++Y  E PL+FRPLYEETSWTYT++L CPVTKEAILIDPVD+TV+RDL+V+ EMGL LV ALNTHCHADHVTGSGLLA+KVPGCKSMIA +SGAKA +HL+PG+RV+FG RYVEARATPGHTNGCM+FVTDDM+M FTGDALLIRGCGRTDFQQG+ ETMF+SIWTQI+SLP ET VYPGHDY+GRL+STIGEEK++N+RL+GK+KEEF+EIMNNLKLAYPKKIDVALPANL+DG++ S
Sbjct:   22 SATAFMSSTPFCTRGV-PKSIRSRSFGSSRLAS-TMTVTAADITTAGKLGEAETSALSDKYKSVLYLATDKGADKGIEPNGFASLRGLTTRHLPVDVKDGLSLQLATDALQALDELPAPALVVCSSGGRASAVQCLRKATEEGWTKDQTLAYALEMKLPFVKNPSLKDWVLATVAAREYKDELPLLFRPLYEETSWTYTFLLGCPVTKEAILIDPVDLTVERDLQVIKEMGLTLVAALNTHCHADHVTGSGLLAQKVPGCKSMIAKISGAKASIHLEPGNRVRFGRRYVEARATPGHTNGCMTFVTDDMKMAFTGDALLIRGCGRTDFQQGSPETMFESIWTQIFSLPHETSVYPGHDYRGRLMSTIGEEKRFNSRLSGKSKEEFIEIMNNLKLAYPKKIDVALPANLVDGVLAS 434          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: EWM29876.1 (ethylmalonic encephalopathy 1 [Nannochloropsis gaditana])

HSP 1 Score: 633.3 bits (1632), Expect = 6.100e-178
Identity = 309/415 (74.46%), Postives = 362/415 (87.23%), Query Frame = 0
Query:   46 SALAFLLKSPSSPVSLYAKALHITPFYPARSCSTTMTVSVAEITTAGKMSEAEASALSDKYKGVLYLATDTGVDKGIESNGFTSLKGLQARHIPVDVKNGLSLQLAADSLKALDELPAPTLVMCSTGGRASAVKCLKKAMEEGWTRDQALAHAESEKLPFVNNCNLRDWVLATVAAKQYMAEPPLIFRPLYEETSWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPGCKSMIAAVSGAKACVHLKPGDRVKFGTRYVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARLAGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGMMVS 461
            SA AF+  +P     +  K++    F  +R  S TMTV+ A+ITTAGK+ EAE SALSDKYK VLYLATD G DKGIE NGF SL+GL  RH+PVDVK+GLSLQLA D+L+ALDELPAP LV+CS+GGRASAV+CL+KA EEGWT+DQ LA+A   KLPFV N +L+DWVLATVAA++Y  E PL+FRPLYEETSWTYT++L CPVTKEAILIDPVD+TV+RDL+V+ EMGL LV ALNTHCHADHVTGSGLLA+KVPGCKSMIA +SGAKA +HL+PG+RV+FG RYVEARATPGHTNGCM+FVTDDM+M FTGDALLIRGCGRTDFQQG+ ETMF+SIWTQI+SLP ET VYPGHDY+GRL+STIGEEK++N+RL+GK+KEEF+EIMNNLKLAYPKKIDVALPANL+DG++ S
Sbjct:   42 SATAFMSSTPFCTRGV-PKSIRSRSFGSSRLAS-TMTVTAADITTAGKLGEAETSALSDKYKSVLYLATDKGADKGIEPNGFASLRGLTTRHLPVDVKDGLSLQLATDALQALDELPAPALVVCSSGGRASAVQCLRKATEEGWTKDQTLAYALEMKLPFVKNPSLKDWVLATVAAREYKDELPLLFRPLYEETSWTYTFLLGCPVTKEAILIDPVDLTVERDLQVIKEMGLTLVAALNTHCHADHVTGSGLLAQKVPGCKSMIAKISGAKASIHLEPGNRVRFGRRYVEARATPGHTNGCMTFVTDDMKMAFTGDALLIRGCGRTDFQQGSPETMFESIWTQIFSLPHETSVYPGHDYRGRLMSTIGEEKRFNSRLSGKSKEEFIEIMNNLKLAYPKKIDVALPANLVDGVLAS 454          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: XP_022839770.1 (Beta-lactamase-like [Ostreococcus tauri] >CEF99331.1 Beta-lactamase-like [Ostreococcus tauri])

HSP 1 Score: 315.8 bits (808), Expect = 2.100e-82
Identity = 186/393 (47.33%), Postives = 250/393 (63.61%), Query Frame = 0
Query:   73 PARSCSTTMTVSVAEITTAGKMSEAEA-SALSD-KYKGVLYLATDTGVDKGIESNGFTSLKGLQARHIPVDVKNGLSLQLAADSLKALDELPAPTLVMCSTGGRASAVKCLKKAMEEGWTRDQALAHAESEKLPFVNNCNLRDWVLATVAAKQYMAEPPLIFRPLYEET-SWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPGCKSMIAAVSGAKACVHLKPGDRVKFG----TRYVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARL-AGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGM 458
            P  S       S   +   G +S+A+   ALSD K+   +Y+  ++  +  + +    S  G   + + V+  + L+  LA    +A++ LP PT+V CST  RAS    L KA E+ W +  AL  A    L F +   L  +V      +  +    LIFR L++ + S TYTY+L CP+TKEA+LIDPV   V+RD+ VV  +GLKL  A+NTHCHADH+TG+G L +K+PG KS+I+  S A+A + ++ GD + FG    +  +E RATPGHT+GC+S+V D+  MVFTGDALLIRGCGRTDFQ G+SE +F+S+  Q++ LP ETLVYP HDY+GR +STI EEK  N RL   KTKEEFVEIMNNLKL YPK+ID ALPANL  G+
Sbjct:    2 PVSSLPNVREFSTDGVVLVGDLSQADVQEALSDGKFASWIYMNPESDANFPLAAK---SALGEAFKQVTVE-GSTLTRGLANALTEAMETLPRPTMVQCSTATRASIAYILYKAREKKWPQAGALQRAREMGLKFFSKPPLAAFV------RDSLRSDGLIFRQLFDTSGSSTYTYLLGCPITKEAVLIDPVKEMVERDIAVVDGLGLKLKYAINTHCHADHITGTGDLKKKIPGLKSVISKASLARADMFVEHGDVISFGADSSSINLEVRATPGHTDGCVSYVCDN--MVFTGDALLIRGCGRTDFQGGSSEKLFESVRNQLFVLPDETLVYPAHDYQGRTMSTIAEEKALNPRLGVAKTKEEFVEIMNNLKLDYPKQIDKALPANLKCGI 382          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: OUS43381.1 (beta-lactamase-like protein [Ostreococcus tauri])

HSP 1 Score: 315.8 bits (808), Expect = 2.100e-82
Identity = 181/364 (49.73%), Postives = 241/364 (66.21%), Query Frame = 0
Query:  101 ALSD-KYKGVLYLATDTGVDKGIESNGFTSLKGLQARHIPVDVKNGLSLQLAADSLKALDELPAPTLVMCSTGGRASAVKCLKKAMEEGWTRDQALAHAESEKLPFVNNCNLRDWVLATVAAKQYMAEPPLIFRPLYEET-SWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPGCKSMIAAVSGAKACVHLKPGDRVKFG----TRYVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARL-AGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGM 458
            ALSD K+   +Y+ T++  +  + +    +  G   + + V+  + L+  LA    +A++ LP PT+V CST  RAS    L KA E+ W +  AL  A    L F +   L  +V      +  +    LIFR L++ + S TYTY+L CP+TKEA+LIDPV   V+RD+ VV  +GLKL  A+NTHCHADH+TG+G L +K+PG KS+I+  S A+A + ++ GD + FG    +  +E RATPGHT+GC+S+V D+  MVFTGDALLIRGCGRTDFQ G+SE +F+S+  Q++ LP ETLVYP HDYKGR +STI EEK  N RL   KTKEEFVEIMNNLKL YPK+ID ALPANL  G+
Sbjct:  168 ALSDGKFASWIYMNTESDANFPLAAK---NALGEAFKQVTVE-GSTLTRGLANALTEAMETLPRPTMVQCSTATRASIAYILYKAREKKWPQAGALQRAREMGLKFFSKPPLAAFV------RDSLRSDGLIFRQLFDTSGSSTYTYLLGCPITKEAVLIDPVKEMVERDIAVVDGLGLKLKYAINTHCHADHITGTGDLKKKIPGLKSVISKASLARADMFVEHGDVISFGADSSSINLEVRATPGHTDGCVSYVCDN--MVFTGDALLIRGCGRTDFQGGSSEKLFESVRNQLFVLPDETLVYPAHDYKGRTMSTIAEEKALNPRLGVAKTKEEFVEIMNNLKLDYPKQIDKALPANLKCGI 519          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: CEL99454.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 303.9 bits (777), Expect = 8.400e-79
Identity = 177/400 (44.25%), Postives = 242/400 (60.50%), Query Frame = 0
Query:   77 CSTTMTVSVAEITTAGKMSEAEASALSDKYKGVLYLATDTGVDKGIESNGFTSLKGLQARHIPVDVKNGLSLQLAADSLKALDELPAPTLVMCSTGGRASAVKCLKKA---------------MEEGWTRDQALAHAESEKLPFVNNCNLRDWVLATVAAK-QYMA--EPPLIFRPLYEETSWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPG-CKSMIAAVSGAKACVHLKPGDRVKFGTRYVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARLAGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGM 458
            C TT+T     I       +     ++ KY+ V+ L     V + + ++    +  +QA    VD K  LS  LAA  L  L+  P PTL+ C +  RAS+V  L  A                ++    D+A+  A+ + LPF+ N  L DWV   + A+ Q +A  +P L FR L++  S TYTY+LA P T++A+LIDPV   +DRDLE++ E GL L  A+NTHCHADH+T +G++  K+ G C  + A   GAKA V +K GD + FG R+VE RATPGHT GC++FV DD  M FTGDALLIRGCGRTDFQ G++  ++ S+W QI+SLP    +YPGHDYKGR V+T+ EE+ +N RL  K ++EFV IM NL L  P +IDVA+PAN+  G+
Sbjct:   20 CPTTVTKDFDLIGAVETQEKLHDLVVNGKYRSVINLCGPAEVCR-LPTDKKCKVPCVQAH---VD-KGKLSYALAARLLATLESAPLPTLIQCQSKWRASSVAMLHIATHPPDAAEQHHGPGSRDQWMAPDEAIEWAKEKGLPFLENQILVDWVKNFLVARCQNLAREDPNLFFRQLFDRESCTYTYLLADPKTRDAVLIDPVLECLDRDLEMIDEYGLVLKYAMNTHCHADHITSTGMMKTKLDGFCSVLSATYEGAKADVKVKHGDCIYFGDRFVEVRATPGHTGGCLTFVLDDHSMAFTGDALLIRGCGRTDFQSGDAALLYKSVWGQIFSLPAHCRLYPGHDYKGRQVTTVWEERLHNTRLI-KGEDEFVNIMKNLNLPKPARIDVAVPANMKCGV 413          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: CBN77410.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 299.7 bits (766), Expect = 1.600e-77
Identity = 157/322 (48.76%), Postives = 215/322 (66.77%), Query Frame = 0
Query:  140 VDVKNGLSLQLAADSLKALD---ELPAPTLVMCSTGGRASAVKCLKKAMEEGWTRDQALAHAESEKLPFVNNCNLRDWVLATVAAKQYMAEPPLIFRPLYEETSWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVP-GCKSMIAAVSGAKACVHLKPGDRVKFGTRYVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARLAGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGM 458
            VD+  G  L     +L A+D   ++  P L MC +  RA A+  + +    GW+ +Q L  A+   L F+    + +WV A V ++    +  LIFR L+E+ S T+TY+L    TK+A++IDPVD T +RD ++V EMGLK    LNTH HADH+TG+G L   +P G KS ++  SG +A V +  GD+++FG+RY+EARATPGHT GCM+FV DD    FTGD LL+RGCGRTDFQ G+SET++ S+  +I++LP +  VYPGHDY+GR  ST+GEEK YN RL  K  EEFV IM+NL L YPK+ID A+PAN++ G+
Sbjct:   58 VDLPLGPGLFEVRSALSAVDRINKMAKPILFMCKSANRAGAMASVFQGCRNGWSSEQTLEWAKPLGLKFLTMPPMVEWVSACVDSR--FPKGGLIFRQLFEKESSTFTYILGDAETKQAVIIDPVDKTAERDSQMVTEMGLKPTLLLNTHVHADHITGTGKLKGLLPGGAKSGVSEASGGQADVKIHDGDKIRFGSRYLEARATPGHTAGCMTFVLDDKSACFTGDTLLVRGCGRTDFQGGSSETLYASVKGKIFTLPNDCTVYPGHDYQGRHSSTVGEEKAYNPRLT-KPVEEFVSIMSNLNLPYPKQIDKAVPANMVCGI 376          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: XP_002500211.1 (predicted protein [Micromonas commoda] >ACO61469.1 predicted protein [Micromonas commoda])

HSP 1 Score: 297.4 bits (760), Expect = 7.900e-77
Identity = 174/388 (44.85%), Postives = 239/388 (61.60%), Query Frame = 0
Query:   80 TMTVSVAEITTAGKMSEAEASA-LSDKYKGVLYLATDTGVDKGIESNGFTSLKGLQARHIPVDV-----KNGLSLQLAADSLKALDELPAPTLVMCSTGGRASAVKCLKKAMEEGWTRDQALAHAES--EKLPFVNNCNLRDWVLATVAAKQYMAEPPLIFRPLYEET-SWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPGCKSMIAAVSGAKACVHLKPGDRVKFGTRYVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARL-AGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGM 458
            T+      +  AG M+E +  A L+   K  LYL          E N       ++A  +P ++        L+ +     +  +D  P P ++ CST  RAS    L KA  +      A+A A S    L F+    L     A   A  +    P+IFR L++ + S TYTY++A     EA+LIDPV   VDRDL+++ E+G+KL  A+NTHCHADHVTGSG +    P  +S+IAA SGA+A + +  GDR++FG+ ++E RATPGHT+GC+S+V DD  MVFTGDA+LIRGCGRTDFQQG+++ +++S+ TQI+SLP +T++YP HDYKG   ST+GEEK  N RL +GKTK+EFVEIM NL L YPKKID ALP N++ G+
Sbjct:    7 TIAYDADGVVLAGDMTEDQVKACLAAGAKSWLYL--------NEECNKACPKAAVEAASVPFEMVPLMTPASLTNECVDKLVAYVDSAPKPAVIQCSTATRASIPYILHKAKTDKLPAASAMALAASMTPPLKFLEKPPLAS---AVKRALTHANRKPVIFRQLFDTSGSSTYTYLIADGPGGEAVLIDPVLEMVDRDLKLIDELGVKLKYAVNTHCHADHVTGSGAIKAARPEVRSIIAAASGAQADIKIGHGDRIEFGSMFLEVRATPGHTDGCLSYVCDD--MVFTGDAVLIRGCGRTDFQQGSADRLYESVHTQIFSLPNDTIIYPAHDYKGHRCSTVGEEKALNPRLGSGKTKDEFVEIMANLNLPYPKKIDEALPKNMVCGI 381          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: XP_001420113.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO98406.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 292.7 bits (748), Expect = 1.900e-75
Identity = 152/234 (64.96%), Postives = 184/234 (78.63%), Query Frame = 0
Query:  230 LIFRPLYEET-SWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPGCKSMIAAVSGAKACVHLKPGDRVKFGTR----YVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARLA-GKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGM 458
            LIFR L++ + S TYTY+L  PV+KEA+LIDP+   VDRDL VV ++GLKL  A+NTHCHADH+TGSG L  KV G +S+IA  SGA+A VH+K GD + FG       +E RATPGHT+GC+S+V D+  MVFTGDALLIRGCGRTDFQ G+SE ++DS+ TQ++ LP ETLVYP HDYKGR+VSTIGEEK+ N RL   KTKEEFVEIM+NL LAYPKKID +LPANL  G+
Sbjct:   25 LIFRQLFDTSGSSTYTYLLGDPVSKEAVLIDPLKEMVDRDLAVVNDLGLKLKYAINTHCHADHITGSGDLKAKVTGLQSVIAESSGARADVHIKHGDVISFGADSNVINLEVRATPGHTDGCVSYVCDN--MVFTGDALLIRGCGRTDFQGGSSEKLYDSVRTQLFELPDETLVYPAHDYKGRMVSTIGEEKELNPRLGLKKTKEEFVEIMSNLNLAYPKKIDESLPANLKCGI 256          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: XP_002595068.1 (hypothetical protein BRAFLDRAFT_90177 [Branchiostoma floridae] >EEN51079.1 hypothetical protein BRAFLDRAFT_90177 [Branchiostoma floridae])

HSP 1 Score: 289.3 bits (739), Expect = 2.100e-74
Identity = 136/230 (59.13%), Postives = 183/230 (79.57%), Query Frame = 0
Query:  230 LIFRPLYEETSWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPGCKSMIAAVSGAKACVHLKPGDRVKFGTRYVEARATPGHTNGCMSFV--TDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARLAGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGM 458
            L+FR L+E+ S TYTY+LA   TKEA+LIDPV  T +RD ++V E+GLKLV  +NTHCHADH+TG+G L   VPGCKS+I+  S AKA + L+ G +VKFG   +E R TPGHTNGC+++V   + +RM FTGD LL+RGCGRTDFQ+G+  T++DS+W +I++LP +TL++P HDYKG+ ++T+GEEK++N RL  +TKE+FVEIMNNL LAYPK+ID A+P+NLM G+
Sbjct:    8 LVFRQLFEKESSTYTYLLADKDTKEAVLIDPVIDTAERDAKLVSELGLKLVYVINTHCHADHITGTGKLKTLVPGCKSVISKASSAKADILLEEGQKVKFGKFSLEVRTTPGHTNGCVTYVLLDESIRMAFTGDTLLVRGCGRTDFQEGDPATLYDSVWGKIFTLPDDTLLFPAHDYKGQTMTTVGEEKRHNPRLT-QTKEKFVEIMNNLGLAYPKQIDKAVPSNLMCGL 236          
BLAST of NO03G04040 vs. NCBI_GenBank
Match: XP_013789204.1 (persulfide dioxygenase ETHE1 homolog, mitochondrial-like, partial [Limulus polyphemus])

HSP 1 Score: 288.9 bits (738), Expect = 2.800e-74
Identity = 138/223 (61.88%), Postives = 178/223 (79.82%), Query Frame = 0
Query:  235 LYEETSWTYTYVLACPVTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAEKVPGCKSMIAAVSGAKACVHLKPGDRVKFGTRYVEARATPGHTNGCMSFVTDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYPGHDYKGRLVSTIGEEKKYNARLAGKTKEEFVEIMNNLKLAYPKKIDVALPANLMDGM 458
            L++ TS+TYTY+LA   TKEA+LIDPV   VDRD+++V E+GL L+ A NTH HADH+TG+G + +K+PGCKS+IA  S AKA VHL+ G+++KFG   +EAR+TPGHTNGC+++V  + +M FTGDALLIRGCGRTDFQQGNSE ++DS+ T I SLP++ L+YP HDYKG+  S++ EEK +N RL  KTK EFVEIM NL LAYPK ID ALPAN++ G+
Sbjct:    1 LFDGTSFTYTYLLADTKTKEAVLIDPVLEQVDRDVKLVEELGLNLIYAANTHVHADHITGTGRIKQKIPGCKSVIAKASEAKADVHLEQGEKLKFGEYELEARSTPGHTNGCLTYVCHNQKMAFTGDALLIRGCGRTDFQQGNSERLYDSVHTHILSLPEDYLLYPAHDYKGQTSSSVWEEKMFNPRLT-KTKAEFVEIMKNLNLAYPKMIDKALPANMVCGL 222          
The following BLAST results are available for this feature:
BLAST of NO03G04040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853535.16.100e-17874.46ethylmalonic encephalopathy 1 [Nannochloropsis gad... [more]
EWM29876.16.100e-17874.46ethylmalonic encephalopathy 1 [Nannochloropsis gad... [more]
XP_022839770.12.100e-8247.33Beta-lactamase-like [Ostreococcus tauri] >CEF99331... [more]
OUS43381.12.100e-8249.73beta-lactamase-like protein [Ostreococcus tauri][more]
CEL99454.18.400e-7944.25unnamed protein product [Vitrella brassicaformis C... [more]
CBN77410.11.600e-7748.76conserved unknown protein [Ectocarpus siliculosus][more]
XP_002500211.17.900e-7744.85predicted protein [Micromonas commoda] >ACO61469.1... [more]
XP_001420113.11.900e-7564.96predicted protein [Ostreococcus lucimarinus CCE990... [more]
XP_002595068.12.100e-7459.13hypothetical protein BRAFLDRAFT_90177 [Branchiosto... [more]
XP_013789204.12.800e-7461.88persulfide dioxygenase ETHE1 homolog, mitochondria... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005454NSK005454Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04040.1NO03G04040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572845gene_1600Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100106g12gene764Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04040.1NO03G04040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04040 ID=NO03G04040|Name=NO03G04040|organism=Nannochloropsis oceanica|type=gene|length=2348bp
ATGGTTGCCTTTAATTTTgtgtgtctcgttcccttttgttttcgctttca
tgattcgactctctcaaaacatatgatccacagAATCAAGAAAAAGCAGC
CGCGAGTAGTCGCGCCTGCTGCTTTATCTCAACCACGACGTCGTCGTCTT
ACTCTCTTGTGCTGCTCCTTCTCGTCTTCGTGGGGTGGAGCAGCAGCCAA
TCTGCATTGGCTTTCTTGCTTAAGTCGCCGTCTTCTCCTGTTAGTCTCTA
CGCAAAGgtaacattcgggtcacagcggcgtcggtcctggtcatgtgtcg
agcggccaccacatgatccggcggcgtttgtgtctgttgaagaacaaccg
ctccttctaccatgccatatgtgttgaaaaaagattcatacgcctacaaa
aacgccatttaaccctcttgacagGCACTCCATATCACACCTTTTTACCC
TGCACGCAGCTGCAGTACCACCATGACGGTCTCGGTGGCTGAAATTACGA
CAGCAGGCAAGATGTCTGAAGCCGAGGCGAGCGCCCTCTCCGACAAGTAC
AAGGGCGTGCTTTACTTGGCCACCGACACCGGTGTAGACAAAGGAATTGA
GTCAAATGGCTTTACATCGCTGAAAGGCTTACAAGCGCGCCACATCCCAG
TCGACGTCAAGgtaaggagctggaacgttaccagagggagatttggtcgt
tagggcggtggtatgtcccaccatcattgggagattggtcagcaggaatc
aagccgtcgcttgaatcttgcgtcatatgaggcctgccgatgcaaacttt
taggtgagaagcctgttatagatttctttggtggtgctatttcgtttcat
ggggatggtgggaggaacctagagggagaagagagacgcgcatccttcgt
tctttggccatgcgttccgattttcctccagctcctcgggaattcattct
tacgaccatctcacattcggaaacttaagtctacacaatagctcaccttc
ttgtcctccattatccacagAATGGCCTGTCCCTCCAGCTGGCCGCAGAT
TCCCTCAAGGCCTTGGACGAGCTCCCTGCCCCCACCCTGGTCATGTGCAG
TACTGGCGGCCGTGCTTCCGCTGTCAAATGCCTGAAAAAAGCAATGGAAG
AGGGATGGACCCGCGACCAAGCTTTGGCCCATGCCGAATCTGAAAAACTG
CCCTTTGTCAACAATTGCAACCTGAGGGACTGGGTGCTCGCGACGGTGGC
CGCCAAGCAATACATGGCTGAGCCTCCCCTGATCTTTCGTCCCTTGTACG
AGGAGACTTCTTGGACCTACACCTACGTCCTGGCCTGCCCTGTCACGAAA
GAGGCGATTTTGATCGATCCTGTGGATGTTACGGTGGACAGAGATTTGGA
AGTGGTGGGGGAAATGGGGTTAAAACTTGTAGGGGCACTGAATACTCATT
GCCATGCAGACCACGTGACGGGGAGTGGGTTGCTGGCGGAGAAAGTCCCC
GGATGCAAATCCATGATTGCGGCCGTGTCAGGCGCTAAGGCGTGTGTGCA
TTTGAAGCCGGGGGATCGGGTCAAGTTTGGCACTCGATACGTGGAAGCAC
GGGCGACACCGGGCCATACGAATGGATGTATGTCTTTCGTGACGGATGAC
ATGAGGATGGTCTTCACGGGGGACGCATTATTGATTCGCGGATGCGGTCG
CACGGACTTCCAGCAGGGGAATTCCGAGACGATGTTTGATAGTATTTGGA
CGCAGATCTATTCGTTGCCGCAGGAGACGCTGGTTTACCCGGGGCATGAT
TACAAGGGGAGGTTGGTGTCCACGATTGGTGAGGAGAAGAAATACAATGC
CCGATTGGCGGGCAAGACAAAGGAAGAGTTTGTGGAGATTATGAATAATC
TGAAGCTGGCGTACCCCAAAAAGATTGATGTGGCCTTGCCGGCGAACTTG
ATGGATGGAATGATGGTAAGCTAAGGGTAGTACGAGGACGGTTGTAGCAT
ATGGATATAACAGATGGATAGAACGGATGCAAATGGTGGCCGACGGATTG
CATGAAGACATACCGTTATGGAGAACATGAGTAAATGACTTTGGGCTTGA
TGTCGTGGGGAAGGAATCGTGGGTAGCGAGAACGCTTAAATTGTAATGGG
GAGACGGGGATGAAAGGGAAGATCAGAGGCAGTGAACCCAATAAGAATGC
CATCGGCAATCATATGAAGAAAAAAGTGATATTTTTTGGTTTGTTTTGAG
TGTTTGAATGTTTGAGCTAGATACACGTGGGCATTGGTACAGCGGCTGGG
GAAACAAAAAACAAAGACAGAAAGAATAAATGTGCAGCATCCGATGGG
back to top

protein sequence of NO03G04040.1

>NO03G04040.1-protein ID=NO03G04040.1-protein|Name=NO03G04040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=461bp
MVAFNFNQEKAAASSRACCFISTTTSSSYSLVLLLLVFVGWSSSQSALAF
LLKSPSSPVSLYAKALHITPFYPARSCSTTMTVSVAEITTAGKMSEAEAS
ALSDKYKGVLYLATDTGVDKGIESNGFTSLKGLQARHIPVDVKNGLSLQL
AADSLKALDELPAPTLVMCSTGGRASAVKCLKKAMEEGWTRDQALAHAES
EKLPFVNNCNLRDWVLATVAAKQYMAEPPLIFRPLYEETSWTYTYVLACP
VTKEAILIDPVDVTVDRDLEVVGEMGLKLVGALNTHCHADHVTGSGLLAE
KVPGCKSMIAAVSGAKACVHLKPGDRVKFGTRYVEARATPGHTNGCMSFV
TDDMRMVFTGDALLIRGCGRTDFQQGNSETMFDSIWTQIYSLPQETLVYP
GHDYKGRLVSTIGEEKKYNARLAGKTKEEFVEIMNNLKLAYPKKIDVALP
ANLMDGMMVS*
back to top
Synonyms
Publications