NO03G03740, NO03G03740 (gene) Nannochloropsis oceanica

Overview
NameNO03G03740
Unique NameNO03G03740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3577
Alignment locationchr3:1105224..1108800 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1105224..1108800 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Homology
BLAST of NO03G03740 vs. NCBI_GenBank
Match: EWM29819.1 (hypothetical protein Naga_100017g53 [Nannochloropsis gaditana])

HSP 1 Score: 468.0 bits (1203), Expect = 5.700e-128
Identity = 230/303 (75.91%), Postives = 260/303 (85.81%), Query Frame = 0
Query:   43 VRRRLHGPPMPMVMMGVQLLILALGSVPSLVNAGFGLGDYRIDVDFFGGEGDLSPAQYKAYLQGKMPATPRGRKYQSPLWYLYSPGLPKIEREAQLAELRYVEQQLGVKFWKVKVDNEKKERFLKSLAEASEAPGDNKIPRRFREEAARSPGTPFFYNLNTGKSIQGMTSCTNLKKWALGKEYRDDPWQGFTSPQFQELMSKTGDDGEKDYMDKYSDHSWILRYRKERDNALAAHKKQYNRRIFWSRFGLAKAPQGDAFERFIEIDRQKEAEQEVKKGWVKPLRSRSAPVSVGSTKSILGRSE 346
            +R +   P    +   + LL L + S  +LV  G GLGDYRID DF GGEGDLSPAQY+AYLQ K P TPRG+KY SPLWYLYSP +PKIER+AQLAELRYVEQQLG+KFWKVKVD+EKKERFLKSLAEASE P DNK+PRRFREEA+ SP TPFFYNLNTGKSI GMTS TNLKKWALGK+Y+D PWQGF+SPQFQ+L+++TGDDGE++YMDKYS+H+WILRYRKERD ALAAHKKQYNRR+F SRFGLA+AP GDAFERFIEIDR KE EQEV+KGWVKP RSR  P+SV STKSILGRS+
Sbjct:    3 LRPKRKQPGRVQIRTTLHLLALIVLST-TLVQGGLGLGDYRIDFDFLGGEGDLSPAQYRAYLQSKTPVTPRGKKYSSPLWYLYSPNIPKIERDAQLAELRYVEQQLGIKFWKVKVDSEKKERFLKSLAEASEPPPDNKLPRRFREEASPSPATPFFYNLNTGKSISGMTSSTNLKKWALGKDYQDGPWQGFSSPQFQDLLARTGDDGEQEYMDKYSNHAWILRYRKERDAALAAHKKQYNRRMFLSRFGLARAPTGDAFERFIEIDRTKEREQEVRKGWVKPSRSRPTPLSVRSTKSILGRSD 304          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: EWM29824.1 (tpr domain protein [Nannochloropsis gaditana])

HSP 1 Score: 401.7 bits (1031), Expect = 5.000e-108
Identity = 215/340 (63.24%), Postives = 262/340 (77.06%), Query Frame = 0
Query:  381 THGPQDLVERAEHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSAR----------RRVGME-AGEYVDNETYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGREGE---RGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAYFTQRRPDLVMARAHLEYAQGEMRKRQQLNGGAGKNEADSDYGDHL 707
            +H  ++L++RAE+ALATLQPELAVKFYERALEATPDAT VMDAL ELL+  G+ ERA  L ERS KLAP+ G +KWLYLGQ+S GW++LQHFSKGAELL+ EL AR          R+ G E  GE +++E +AI+NQ+VS  CSIAELYLTDLCFE+DAE RCQ ALDEA+R+DVGGSPEVTQA ANLRLSQ+ G+EA+ LM+ETV+RL ACQQ+D EE                RGL LP +MFR+QTAKLLLECQ +   KKCAK A+++LEACKCEDDEN+EVWYLLGVAY  QR+PD+ MA+AHL +AQ  +RK +Q++G A K +A   YG+ L
Sbjct:   16 SHEHEELMKRAEYALATLQPELAVKFYERALEATPDATPVMDALGELLLNTGDGERAYALFERSTKLAPDMGATKWLYLGQLSEGWKSLQHFSKGAELLQEELGARRINPCLKEPDRKEGEEVGGEGMNDEAFAIINQLVSTHCSIAELYLTDLCFEEDAEARCQAALDEALRLDVGGSPEVTQACANLRLSQKRGQEASALMIETVKRLGACQQDDVEEXXXXXXXXXXXXXXEIRGLQLPTIMFRLQTAKLLLECQAY--NKKCAKEAVRVLEACKCEDDENVEVWYLLGVAYSRQRKPDVGMAKAHLLHAQQALRKMEQMDGDAEKADA---YGEQL 350          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: CBN78545.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 211.5 bits (537), Expect = 9.600e-51
Identity = 138/346 (39.88%), Postives = 190/346 (54.91%), Query Frame = 0
Query:  383 GPQDLVERA------EHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVDNETYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGREGERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAYFTQRRPDLVMARAHLEYAQGEMRKRQQLNGGAGKNEADSDYGDHLRLVEEQLAMVVDAEEK 723
            G + L+E+       E A     P LAV  Y++ LEA PD T++M   A+L++  GE   AK +L RS  L PE GP K+LY+ Q+  G +AL H+ KG ELL+ +L+     G  AG   + E  A+  +   A CS+AEL++TDLCFE+DAE RCQ ALD ++R D GG PE   A+ANLRLSQ   EEAA    E  RRL  C+                      P P+  FRV  AK+L+EC +    K C+ +A+++L     EDDEN+E+WYL+ VA+ + + PD   ARAHL  A   + K +      G+  A   + D ++LV+EQL      E K
Sbjct:   32 GEESLLEKGTVDALLEQARKAGDPFLAVTLYQKVLEARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLAD----GGGAGGTKEAEA-ALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSIRYDYGG-PEPLNAVANLRLSQSRPEEAAQSAEEAFRRLALCE----------------------PPPDHEFRVSLAKVLMECSS--VNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFA---FEDQVQLVQEQLEATALLESK 344          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: XP_024581264.1 (Tetratricopeptide TPR1 [Plasmopara halstedii] >CEG44895.1 Tetratricopeptide TPR1 [Plasmopara halstedii])

HSP 1 Score: 188.3 bits (477), Expect = 8.700e-44
Identity = 128/335 (38.21%), Postives = 183/335 (54.63%), Query Frame = 0
Query:  386 DLVERAEHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVDNETYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGREGERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAYFTQRRPDLVMARAHLEYAQGEMRKRQQLNGGAGKNEADSDY-GDHLRLVEEQLAMVVDA 720
            DLV +AE  +   QPELAV+FYERAL   P  T+++D++ EL   L   ERA    ++S +L+P   P+K+ YL Q+  G +A Q+ ++G   L+ EL  +        +    E   I  Q+  A CS+ ELY+TDLC++++AEGRC+ + +EAM+ DV G PE TQALANLRL Q+N E A  L+ ET RRLN        E+ +DE            +P+L FR  T K+L+E + +       + A  +LE    EDDEN E+W+L+G  Y  +   DL  A   LE+      K QQ+     K   D  Y  D L  V E +A ++D+
Sbjct:   12 DLVAKAEALVDQCQPELAVQFYERALLQDPSNTSLLDSIGELSTELDNPERALSAFQQSVRLSPSQNPTKYFYLSQLVVGKEAEQYMTQGITFLQQELQRQ-------ADPNSFEAMTIKKQICDAYCSLGELYMTDLCYDEEAEGRCEKSFEEAMKYDV-GLPEPTQALANLRLVQQNKEGADSLLNETYRRLN--------ENCDDES-----------MPSLDFRTATGKMLIEVERY-------EEACDVLEGVMQEDDENAELWFLVGTCY--RAMDDLPNA---LEF----FEKCQQMLNNLKKELRDEFYLHDQLESVNETIAELLDS 303          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: XP_008892221.1 (hypothetical protein PPTG_02736 [Phytophthora parasitica INRA-310] >ETI49587.1 hypothetical protein F443_06637 [Phytophthora parasitica P1569] >ETK89473.1 hypothetical protein L915_06512 [Phytophthora parasitica] >ETL42880.1 hypothetical protein L916_06454 [Phytophthora parasitica] >ETL96050.1 hypothetical protein L917_06320 [Phytophthora parasitica] >ETM49232.1 hypothetical protein L914_06427 [Phytophthora parasitica] >ETN23015.1 hypothetical protein PPTG_02736 [Phytophthora parasitica INRA-310] >ETO78302.1 hypothetical protein F444_06708 [Phytophthora parasitica P1976] >ETP19349.1 hypothetical protein F441_06645 [Phytophthora parasitica CJ01A1] >ETP47255.1 hypothetical protein F442_06678 [Phytophthora parasitica P10297] >KUF76729.1 hypothetical protein AM587_10017139 [Phytophthora nicotianae] >KUF88284.1 Polycomb protein eed-A [Phytophthora nicotianae])

HSP 1 Score: 176.0 bits (445), Expect = 4.500e-40
Identity = 116/303 (38.28%), Postives = 166/303 (54.79%), Query Frame = 0
Query:  386 DLVERAEHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVD---NETYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGREGERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAYFTQRRPDLVMARAHLEYAQGEMRK 686
            +LV +AE  +   QPELAV+F+E+AL   P  T+++D++ EL   L   ERA    ++S +LAP   P+K+ YL Q++TG  A ++ ++G + L+ EL           ++VD   +E   I  Q+  A CS+ ELY+TDLC  ++AE RC+    EAM+ DV G PE TQALANLRL Q+N E A  L+ ET RRLN    ED                    LP+L FR  T K+L+E + +       ++A  +LE    EDDEN E+W+L+G  Y  +   DL  A    E  Q  ++K
Sbjct:   12 ELVAKAEALVDQCQPELAVQFFEKALLQEPANTSLLDSIGELSTELDNPERALSAFQQSVQLAPAQNPAKYFYLSQLATGEDAERYTTQGIKFLQQELQ----------QHVDPNTSEALTIKKQICDAFCSLGELYMTDLCDHEEAETRCEKYFQEAMKYDV-GLPEPTQALANLRLVQQNKEAADGLLEETYRRLNESCDED-------------------SLPSLEFRTATGKMLIEVERY-------EQACDVLEGVMQEDDENAELWFLVGTCY--RAMDDLPNALEFFEKCQTMLKK 275          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: XP_002999198.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69344.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 176.0 bits (445), Expect = 4.500e-40
Identity = 116/304 (38.16%), Postives = 167/304 (54.93%), Query Frame = 0
Query:  386 DLVERAEHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVD---NETYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLN-ACQQEDYEEDIEDEGEKGREGERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAYFTQRRPDLVMARAHLEYAQGEMRK 686
            +LV +AE  +   QPELAV+F+E+AL   P  T+++D++ EL   L   ERA    ++S +LAP   P+K+ YL Q++ G +A ++ ++G   L+ EL           ++VD    E   I  Q+  A CS+ ELY+TDLC  D+AE RC+    EA++ DV G PE TQALANLRL Q+N E A DL+ ET RRLN  C +E+                    LP+L FR  T K+L+E + +       ++A  +LE    EDDEN E+W+L+G  Y  +   DL  A    E  Q  ++K
Sbjct:   12 ELVAKAEALVDQCQPELAVQFFEKALVQEPINTSLLDSIGELSTELDNPERALSAFQQSVQLAPAQNPAKYFYLSQLAAGEEAERYTTQGITFLQQELQ----------QHVDPNTPEALTIKKQICDALCSLGELYMTDLCDHDEAETRCENYFQEAIKFDV-GLPEPTQALANLRLVQQNKEAADDLLKETYRRLNEGCDEEN--------------------LPSLEFRTATGKMLMEVERY-------EQACDVLEGVMQEDDENAELWFLVGTCY--RAMDDLPNALEFFEKCQTMLKK 275          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: GAX93401.1 (Hypothetical protein PINS_001302 [Pythium insidiosum])

HSP 1 Score: 176.0 bits (445), Expect = 4.500e-40
Identity = 110/276 (39.86%), Postives = 156/276 (56.52%), Query Frame = 0
Query:  386 DLVERAEHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVDNETYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGREGERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAY 662
            +L+ +AE  +   QPELAVKF+E+AL   P  T ++D + EL   L   ERA  + ++S +LAP   PSKWLYL Q+  G  A+++ ++G   L+ EL     V  E+      E   I  Q+  A CS+ ELY+TDLC EDDAE RC+     A++ D+ G+PE TQALANLRL+Q+  +EA  L+ ET RRL     E+ +E+                 P+L FR+ T KLL+E + +       + A  +LE    EDDEN E+W+L+G  Y
Sbjct:   16 ELIAKAESLVDQCQPELAVKFFEKALLKEPTNTMLLDTIGELSTELDNPERALAVFQQSIQLAPAQNPSKWLYLAQLVGGEDAVKYTTQGITYLQQELQG---VAAES-----QEAQVIKKQICXAYCSLGELYMTDLCDEDDAEARCENYFQSALQFDI-GTPEPTQALANLRLTQQRRDEAVPLLEETYRRL----AENCDEN---------------STPSLEFRIFTGKLLIEVEKY-------EEACDVLEGVMQEDDENAELWFLVGTCY 256          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: OWZ17668.1 (hypothetical protein PHMEG_0008359, partial [Phytophthora megakarya])

HSP 1 Score: 171.4 bits (433), Expect = 1.100e-38
Identity = 115/300 (38.33%), Postives = 163/300 (54.33%), Query Frame = 0
Query:  386 DLVERAEHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVDNETYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGREGERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAYFTQRRPDLVMARAHLEYAQGEMRK 686
            +LV +AE  +   QPELAV+F+E+AL   P  T+++D++ EL   L   ERA    ++S +LAP   PSK+ YL Q+ TG +A    ++G   L+ EL        +  +    E   I  Q+  A CS+ ELY+TDLC  ++AEGRC+    EAM  DV G PE TQALANLRL Q+N E A +L+ ET RRL+    E+ +E+                LP+L FR  T K+L+E + +       ++A  +LE    EDDEN E+W+L+G  Y  +   DL  A    E  Q  + K
Sbjct:  281 ELVAKAEALVDQCQPELAVQFFEKALVQDPANTSLLDSIGELSTELDNPERALSAFQQSVQLAPAQNPSKYFYLSQLVTGEEAEHFMTQGITHLQQEL-------QQHADPKTPEALVIKKQICDAFCSLGELYMTDLCDHEEAEGRCEKYFQEAMNFDV-GLPEPTQALANLRLVQQNKEAADELLEETYRRLH----ENCDEN---------------SLPSLEFRTATGKMLIEVERY-------EQACDVLEGVMQEDDENAELWFLVGTCY--RAMDDLPNALEFFEKCQKMLNK 544          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: XP_009518976.1 (hypothetical protein PHYSODRAFT_255032 [Phytophthora sojae] >EGZ23688.1 hypothetical protein PHYSODRAFT_255032 [Phytophthora sojae])

HSP 1 Score: 170.6 bits (431), Expect = 1.900e-38
Identity = 124/333 (37.24%), Postives = 177/333 (53.15%), Query Frame = 0
Query:  386 DLVERAEHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVDNETYA---IMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGREGERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAYFTQRRPDLVMARAHLEYAQGEMRKRQQLNGGAGKNEADSDY-GDHLRLVEEQLA 715
            +LV +AE  +   QPELAV+F+E+AL   P   +++D++ EL   L   ERA    ++S  LAP   PSK+ YL Q+ TG +A ++ ++G   L+ EL           ++VD  T A   I  Q+  A CS+ ELY+TDLC  ++AE RC+    +AM+ DV G PE TQALANLRL Q+N E A  L+ ET RRLN        E+ ++E            +P+L FR  T K+L+E + +       ++A  +LE    EDDEN E+W+L+G  Y  +   DL  A    E  Q  + K +       K   D  Y  D L+ VEE +A
Sbjct:  280 ELVAKAEALVDQCQPELAVQFFEKALLQEPSNASLLDSIGELSTELDNPERALSAFQQSVALAPAQNPSKYFYLSQLVTGEEAERYTTQGITQLEHELQ----------QHVDPSTPAALTIKKQICDAFCSLGELYMTDLCDHEEAEARCENYFQQAMKFDV-GLPEPTQALANLRLVQQNKEAADGLLEETFRRLN--------ENCDEES-----------MPSLEFRTATGKMLIEVERY-------EQACDVLEGVMQEDDENAELWFLVGTCY--RAMDDLPNALEFFEKCQTMLTKLK-------KELRDEFYLQDQLQSVEETIA 566          
BLAST of NO03G03740 vs. NCBI_GenBank
Match: OQR94207.1 (hypothetical protein ACHHYP_01616 [Achlya hypogyna])

HSP 1 Score: 167.5 bits (423), Expect = 1.600e-37
Identity = 102/275 (37.09%), Postives = 156/275 (56.73%), Query Frame = 0
Query:  387 LVERAEHALATLQPELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPESGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVDNETYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPEVTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGREGERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDENMEVWYLLGVAY 662
            L+ +AE  +   QPELA+KF+++A    P+ + ++DA+ EL   + + E A     RS +LAP+S P K+LY  Q+  G ++ Q+  +G  ++K  + A    G+E+     +E+  +  QV  A CS+ ELY++DLC  DDAE +C+  L EAM+ D+ G PE TQALANLRL+Q+  +EA   + ET +RL+AC +                      +P+L FR  T KLL+E + +       ++A  +LE    EDDEN E+WYL+G  Y
Sbjct:   12 LLAKAEELVDQCQPELAIKFFQKAAALEPNNSEILDAIGELATEIDDPETALQAFHRSIELAPKSNPGKYLYAAQLLQGEESEQYTLQGINIMKELMPA--LPGIES----TDESKLLRKQVCDAYCSLGELYMSDLCDADDAEAKCEFYLQEAMKYDM-GLPEPTQALANLRLTQQRKDEACVCLDETYKRLSACDEN--------------------TMPSLEFRTFTGKLLIEVEKY-------EQACDVLEGVMQEDDENAELWYLVGSCY 252          
The following BLAST results are available for this feature:
BLAST of NO03G03740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29819.15.700e-12875.91hypothetical protein Naga_100017g53 [Nannochlorops... [more]
EWM29824.15.000e-10863.24tpr domain protein [Nannochloropsis gaditana][more]
CBN78545.19.600e-5139.88conserved unknown protein [Ectocarpus siliculosus][more]
XP_024581264.18.700e-4438.21Tetratricopeptide TPR1 [Plasmopara halstedii] >CEG... [more]
XP_008892221.14.500e-4038.28hypothetical protein PPTG_02736 [Phytophthora para... [more]
XP_002999198.14.500e-4038.16conserved hypothetical protein [Phytophthora infes... [more]
GAX93401.14.500e-4039.86Hypothetical protein PINS_001302 [Pythium insidios... [more]
OWZ17668.11.100e-3838.33hypothetical protein PHMEG_0008359, partial [Phyto... [more]
XP_009518976.11.900e-3837.24hypothetical protein PHYSODRAFT_255032 [Phytophtho... [more]
OQR94207.11.600e-3737.09hypothetical protein ACHHYP_01616 [Achlya hypogyna... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005521NSK005521Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03740.1NO03G03740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572730gene_1571Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g52gene824Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03740.1NO03G03740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03740 ID=NO03G03740|Name=NO03G03740|organism=Nannochloropsis oceanica|type=gene|length=3577bp
ATGTTATTCAGGATTATCACAGGCATCCAGGCGCTGCGCACGACTCTCCT
CTCTGGTGCAGCACCCAAGATTTCCTGCGGGCCTTGCTCCTCCTCCTCAA
CTACGACGACACAGGCGATGGCTTGCGTAAGAAGAAGGCTCCACGGCCCG
CCCATGCCCATGGTGATGATGGGAGTGCAGTTGCTGATCTTGGCGCTTGG
CTCCGTCCCCTCGTTAGTCAATGCAGGTTTTGGCCTGGGAGACTACCGCA
TCGACGTTGACTTTTTTGGCGGCGAGGGAGACCTCAGCCCTGCGCAgtac
gtacacagggataataatgtggatgggtgtgttcggtggggtatatgcgt
agatctgcttatgtggatgattgaaaaggggaggcagtgcggcatgtgcg
ctctctccgccttgcttctccccactatcgcgtccctcctccagagacaa
acactcttactctcgtctcccctctcccttcattccagGTACAAGGCTTA
TCTTCAAGGAAAAATGCCCGCCACTCCCCGAGGCCGCAAGTATCAATCCC
CCCTTTGGTACCTGTACTCCCCGGGCTTGCCCAAAATTGAACGTGAAGCA
CAGCTCGCGGAGTTGCGATACGTGGAGCAGCAGCTCGGAGTGAAGTTTTG
GAAGGTCAAGGTAGACAACGAGAAAAAAGAGAGATTTTTGAAGAGCCTGG
CGGAAGCCAGTGAGGCCCCTGGGGATAACAAGATTCCACGACGGTTTAGG
GAGGAGGCAGCCCGCAGCCCTGGGACGCCTTTCTTTTATAACCTgtacgt
acaggggatatttgtgcacgtgcgtgcatgtgcatgtgtgtttttataat
atgttttgtgatacccttgtttagagcgtgctttggtgctatcttcttgc
cgaatacagttcctgtttcactccttctcttcctccactctcccacagCA
ACACGGGCAAGAGCATCCAAGGCATGACCTCGTGCACCAACCTCAAGAAA
TGGGCGTTGGGGAAAGAGTATAGAGACGACCCATGGCAAGGTTTCACCTC
TCCGCAGTTTCAAGAATTGATGTCCAAGACAGGCGATGATGGCGAAAAAG
ATTgtaagtcagccttcccccctccccccccccctcttctacctctccta
atttcccaaataatatctagacgatacaagcaagagcatgaaataaattt
ggctcgtgccattctttgcttcatctgtttttctcatctgctattacccc
agaaggtatacacatgcctcaataacgacactgattatccctccatcccg
cgctccctcattatctcttcaccagACATGGATAAGTACAGCGACCACTC
TTGGATTCTTCGCTATCGAAAAGAGCGCGACAATGCCCTGGCCGCACATA
AGAAGCAGTACAATCGTCGAATATTTTGGTCGAGATTTGGCCTTGCCAAA
GCTCCGCAAGGCGATGCATTTGAACGCTTCATTGAAATCGACCGGCAAAA
AGAGGCCGAGCAGGAGGTAAAGAAAGGATGGGTGAAGCCTTTACGCTCCC
GCTCAGCCCCCGTGTCGGTAGGCTCGACGAAAAGTATTTTGGGGAGGAGC
GAGAAAAAGAAGAAGAAGGAGGAGGATAGTAAGAGGGGTCGCGTAGAGAG
GCGgtgagggaggatattggaaggcgagacactgcctgagagtgtgtgtg
gcacactagccattaagagataaatcgtgtaaaaatcaaaaacacacgaa
acattttcaataaaagaaaaagaagtaagtcagcagcaaccagacaaagc
agtgaaaatcaacctccccacctctcgcgatttatcttccgtggctctca
tccctttcctttcacctccgcattttcgttggccgccgggctgactgctg
cagacctgtatccactatatgcgtcacacctcgcttgagtgctttaaatt
aaccttacaactttctcacgcctcatgccccactatcccaagCCACAGCC
CATCTCGCAAGTTGGCAGCAACCGAGGACACGACGATGCAAGCTCCAACA
CACGGTCCTCAAGATCTAGTAGAACGCGCAGAGCATGCCCTTGCCACCTT
ACAGCCGGAGTTGGCCGTCAAgtacgtcaaaaccgatgcctggaaataaa
aataaaaatatttatatattgcatatatatgtatatatattgcccagcgc
tgccccatccactaatgcgatgttgggctcactattgcttcccttcccac
tcatgaccgatggccgaccagGTTCTACGAACGCGCTTTAGAAGCCACGC
CGGACGCCACTGCCGTGATGGACGCCTTGGCAGAGCTTTTGATTGGTTTG
GGAGAAAGCGAGCGGGCAAAAGGATTGCTGGAGAGGAGCGCCAAGTTGGC
TCCAGAGAGTGGGCCAAGCAAATGGTTGTATCTGGGACAGATGTCAACAG
GCTGGCAGGCTCTGCAGCATTTCAGCAAGGGTGCGGAATTGTTGAAAGCA
GAACTGTCTGCACGAAGACGCGTCGGAATGGAGGCTGGAGAATACGTCGA
CAACGAGACGTACGCGATCATGAATCAAGTGGTCAGCGCGCAATGCTCGA
TCGCTGAGCTTTACTTGACGGATTTGTGTTTTGAGGATGATGCAGAGGGT
CGATGTCAGGTGGCATTGGATGAAGCGATGCGGATGGATGTGGGAGGCTC
TCCGGAGGTAACTCAGGCATTGGCGAATTTACGATTGAGCCAAGAAAATG
GAGAGGAGGCGGCAGATTTAATGCTTGAGACGGTGCGGAGATTAAACGCA
TGCCAGCAAGAGGATTACGAGGAGGATATTGAGGACGAAGGGGAGAAAGG
GCGGGAGGGAGAAAGGGGCCTGCCCCTTCCCAATTTAATGTTTAGGGTCC
AAACGGCAAAATTGCTTTTGGAGTGCCAGACGTTTAAGACAGGCAAAAAA
TGCGCGAAGCGGGCGATTAAAATCTTGGAGGCATGTAAATGTGAGGATGA
TGAGAACATGGAGGTGTGGTATTTATTGGGGGTTGCTTATTTCACACAGA
GAAGGCCGGATTTGGTAATGGCGAGGGCGCACCTAGAGTATGCACAGGGG
GAGATGAGAAAACGGCAGCAGCTGAATGGTGGAGCAGGAAAGAATGAAGC
GGATTCTGACTATGGTGACCACTTGAGACTGGTGGAGGAGCAGTTGGCGA
TGGTTGTGGATGCGGAGGAGAAAGGGATTAAGAAGTGCGAAGAGGATGGG
GCGGCGATGGAGGACGATGGCGATGGTCATGAGGAGAGGGGGGTTATAAG
TAATAGTAGCAGCAGCAGCAGCAGTGAGGACAGCTGTAGTGGCTCTGATG
CGGACGAAGGGGGGGGGGCAATGGAAAATTGATGAGAGGGGTACTGAAGA
AATTTATACACAAAATCAGATAGAAGCAGGAGTAAGGCCCTGGACAGAAA
GGCCCCATGGCTATCCCGCATCACAGTGACTATGCCACGCGATTAACTTA
CTCCCTTTCCTCAAAAAGGAAGCATGGAACCAATAGTCAAGACTCCCACC
ACAATTTTGATAAGCACAACGACCGAC
back to top

protein sequence of NO03G03740.1

>NO03G03740.1-protein ID=NO03G03740.1-protein|Name=NO03G03740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=775bp
MLFRIITGIQALRTTLLSGAAPKISCGPCSSSSTTTTQAMACVRRRLHGP
PMPMVMMGVQLLILALGSVPSLVNAGFGLGDYRIDVDFFGGEGDLSPAQY
KAYLQGKMPATPRGRKYQSPLWYLYSPGLPKIEREAQLAELRYVEQQLGV
KFWKVKVDNEKKERFLKSLAEASEAPGDNKIPRRFREEAARSPGTPFFYN
LNTGKSIQGMTSCTNLKKWALGKEYRDDPWQGFTSPQFQELMSKTGDDGE
KDYMDKYSDHSWILRYRKERDNALAAHKKQYNRRIFWSRFGLAKAPQGDA
FERFIEIDRQKEAEQEVKKGWVKPLRSRSAPVSVGSTKSILGRSEKKKKK
EEDSKRGRVERRHSPSRKLAATEDTTMQAPTHGPQDLVERAEHALATLQP
ELAVKFYERALEATPDATAVMDALAELLIGLGESERAKGLLERSAKLAPE
SGPSKWLYLGQMSTGWQALQHFSKGAELLKAELSARRRVGMEAGEYVDNE
TYAIMNQVVSAQCSIAELYLTDLCFEDDAEGRCQVALDEAMRMDVGGSPE
VTQALANLRLSQENGEEAADLMLETVRRLNACQQEDYEEDIEDEGEKGRE
GERGLPLPNLMFRVQTAKLLLECQTFKTGKKCAKRAIKILEACKCEDDEN
MEVWYLLGVAYFTQRRPDLVMARAHLEYAQGEMRKRQQLNGGAGKNEADS
DYGDHLRLVEEQLAMVVDAEEKGIKKCEEDGAAMEDDGDGHEERGVISNS
SSSSSSEDSCSGSDADEGGGAMEN*
back to top
Synonyms
Publications