NO03G03370, NO03G03370 (gene) Nannochloropsis oceanica

Overview
NameNO03G03370
Unique NameNO03G03370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length804
Alignment locationchr3:1006930..1007733 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1006930..1007733 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 112.1 bits (279), Expect = 1.600e-21
Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 0
Query:    1 MAWRGGAFPGPGKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDENMSALKLKAAVAQAKAEVARVKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK 151
            MA RG   PGPGKGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+   A ++K   ++A AE+ARV+ +R ++E  WK EVER KRE+Q+A+TQDY PYQAA+     +R GT G ++ EE+
Sbjct:   30 MARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQ------GIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIARVEDKRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEE 173          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 91.7 bits (226), Expect = 2.200e-15
Identity = 64/168 (38.10%), Postives = 86/168 (51.19%), Query Frame = 0
Query:    1 MAWRGGAFPGPGKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDENMSALKLKAAVAQAKAEVAR------------------VKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK 151
            MA RG   PGPGKGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+     ++K   ++A AE+A+                        ++E  WK EVER KRE+Q+AYTQDY PYQAA+     +R GTGG ++ EE+
Sbjct:   48 MARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQ------GIGAVLGVAGATAVVVRTFDQT----EIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEE 205          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 90.5 bits (223), Expect = 4.900e-15
Identity = 64/175 (36.57%), Postives = 85/175 (48.57%), Query Frame = 0
Query:    1 MAWRGGAFPGPGKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDENMSALKLKAAVAQAKAEV-------------------------ARVKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK 151
            MA RG   PGPGKGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+   A ++K   ++A AE+                                 ++E  WK EVER KRE+Q+AYTQDY PYQAA+     +R GTGG ++ EE+
Sbjct:   30 MARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQ------GIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEE 198          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 82.4 bits (202), Expect = 1.300e-12
Identity = 57/150 (38.00%), Postives = 74/150 (49.33%), Query Frame = 0
Query:    1 MAWRGGAFPGPGKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDENMSALKLKAAVAQAKAEVARVKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK 151
            MA RG   PGPGKGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+   A ++K A                        EVER KRE+Q+A+TQDY PYQAA+     +R GT G ++ EE+
Sbjct:   94 MARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQ------GIGAVLGVAGATAVVVRTFDQTEMAPEIKYA------------------------EVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEE 213          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana])

HSP 1 Score: 78.6 bits (192), Expect = 1.900e-11
Identity = 57/157 (36.31%), Postives = 79/157 (50.32%), Query Frame = 0
Query:   12 GKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDENMSALKLKAAVAQAKAEVAR------------------VKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK 151
            GKGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+     ++K   ++A AE+A+                        ++E  WK EVER KRE+Q+AYTQDY PYQAA+     +R GTGG ++ EE+
Sbjct:    7 GKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQ------GIGAVLGVAGATAVVVRTFDQT----EIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEE 153          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana])

HSP 1 Score: 76.3 bits (186), Expect = 9.500e-11
Identity = 64/201 (31.84%), Postives = 84/201 (41.79%), Query Frame = 0
Query:    1 MAWRGGAFPGPGKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDENMSALKLKAAVAQAKAEV--------------------------------------------------ARVKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEKK 152
            MA RG   PGPGKGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+   A ++K   ++A AE+                                                          ++E  WK EVER KRE+Q+A+TQDY PYQAA+    D+RK  GG    EEK+
Sbjct:   93 MARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQ------GIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALV---DKRKKRGGISGSEEKE 284          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 75.5 bits (184), Expect = 1.600e-10
Identity = 59/179 (32.96%), Postives = 75/179 (41.90%), Query Frame = 0
Query:    1 MAWRGGAFPGPGKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDENMSALKLK-----------------------------AAVAQAKAEVARVKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK 151
            MA RG   PGPGKGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+   A ++K                                                 E  WK EVER KRE+Q+A+TQDY PYQAA+      R GT G ++ EE+
Sbjct:   90 MARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQ------GIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKTRGGTSGSEEKEEE 262          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana])

HSP 1 Score: 75.5 bits (184), Expect = 1.600e-10
Identity = 58/181 (32.04%), Postives = 81/181 (44.75%), Query Frame = 0
Query:   13 KGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDENMSALKLKAAVAQAKAEVAR-------------------------------------------VKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK 151
            KGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+   A ++K   ++A AE+A+                                              +R ++E  WK EVER KRE+Q+AYTQDY PYQAA+     +R GTGG ++ EE+
Sbjct:   64 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQ------GIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEE 238          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 65.1 bits (157), Expect = 2.200e-7
Identity = 55/164 (33.54%), Postives = 72/164 (43.90%), Query Frame = 0
Query:    1 MAWRGGAFPGPGKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINALAATVGVTIAVITSTAVAVHHYDE-NMSALKLKAA-------------VAQAKAEVARVKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK 151
            MA RG   PGPGKGR LRG F ST HTG G + G    +     F        +G  + V  +TAV V  +D+  +  ++ KAA                                          KRE+Q+AYTQDY PYQAA+     +R GTGG ++ EE+
Sbjct:  111 MARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQ------GIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEE 268          
BLAST of NO03G03370 vs. NCBI_GenBank
Match: EWM20106.1 (hypothetical protein Naga_101772g1 [Nannochloropsis gaditana])

HSP 1 Score: 64.3 bits (155), Expect = 3.700e-7
Identity = 40/97 (41.24%), Postives = 54/97 (55.67%), Query Frame = 0
Query:   63 STAVAVHHYDEN--------------MSALKLKAAVAQAKAEVARVKGERELAEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQ 146
            STAVAVHH D+                            KA+VARV+GER L+E+  + EVER+K ++++  TQD+ PYQAAI +   +R G GGPQ
Sbjct:   60 STAVAVHHLDQTEIKRIQDKXXXXXXXXXXXXXXXXXXXKADVARVEGERRLSEERLRAEVERYKYDLRLTQTQDFKPYQAAIRENQTKRGGGGGPQ 156          
The following BLAST results are available for this feature:
BLAST of NO03G03370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 11
Match NameE-valueIdentityDescription
EWM20057.11.600e-2144.00hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20145.12.200e-1538.10hypothetical protein Naga_101508g3 [Nannochloropsi... [more]
EWM20009.14.900e-1536.57hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20114.11.300e-1238.00hypothetical protein Naga_101734g1 [Nannochloropsi... [more]
EWM20146.11.900e-1136.31hypothetical protein Naga_101508g1 [Nannochloropsi... [more]
EWM20119.19.500e-1131.84hypothetical protein Naga_101718g2 [Nannochloropsi... [more]
EWM20060.11.600e-1032.96hypothetical protein Naga_101993g1 [Nannochloropsi... [more]
EWM20082.11.600e-1032.04hypothetical protein Naga_101888g1 [Nannochloropsi... [more]
EWM20066.12.200e-733.54hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM20106.13.700e-741.24hypothetical protein Naga_101772g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03370.1NO03G03370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03370.1NO03G03370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03370 ID=NO03G03370|Name=NO03G03370|organism=Nannochloropsis oceanica|type=gene|length=804bp
ATGGCATGGCGAGGGGGCGCGTTTCCCGGTCCAGgtagggtcttgtgagg
gtttgatgttagggttgtaggcggaaggagtgggggaactgcccgtggct
tgtttgatgacagattgtccggatgtctgtcttgtttgagagtgagtctt
tgttgtgcgggcaaggggccgcgccaaggtgttcacgcacaagcacattc
atactcgcccacagGGAAGGGACGCGCGCTGCGGGGGGCATTCCTGTCGA
CAACGCACACGGGTACTGGGAATACAGGAGGCTCTGGAAGCATGCGGTTG
CTCCGAGGTTCCTTTGATATCAACGCATTGGCAGCTACTGTAGGTGTGAC
GATAGCGGTTATCACCTCTACCGCTGTGGCCGTCCATCATTACGATGAGA
ACATGTCGGCGCTCAAACTAAAAGCAGCGGTCGCTCAAGCGAAAGCAGAG
GTCGCGCGGGTTAAGGGCGAGCGGGAGTTGGCAGAACAAATGTGGAAGAA
TGAGGTGGAGCGCCACAAACGAGAAATACAAATTGCATATACACAAGATT
ACACGCCTTATCAGGCGGCGATTTCAAAGGGAAACGATAGGAGGAAAGGG
ACCGGAGGACCGCAAAAGGATGAGGAGAAGAAAGGGTAGCTTCCGGTAGT
CACTTGCGTGGATGTGCATTGAAGACCATGTAAAAGACGCATTCAAAGAC
ACTGTAGAGTAGCCAGGGTAATATGGTGGACGTGGGACGGTGACTTGAGG
GGATGGGGCGCGTACACGGTCAACTCAACAACGAGCACTCCGTAAACTTC
CAAC
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protein sequence of NO03G03370.1

>NO03G03370.1-protein ID=NO03G03370.1-protein|Name=NO03G03370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=153bp
MAWRGGAFPGPGKGRALRGAFLSTTHTGTGNTGGSGSMRLLRGSFDINAL
AATVGVTIAVITSTAVAVHHYDENMSALKLKAAVAQAKAEVARVKGEREL
AEQMWKNEVERHKREIQIAYTQDYTPYQAAISKGNDRRKGTGGPQKDEEK
KG*
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Synonyms
Publications