NO03G03100, NO03G03100 (gene) Nannochloropsis oceanica

Overview
NameNO03G03100
Unique NameNO03G03100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3112
Alignment locationchr3:926062..929173 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:926062..929173 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO03G03100 vs. NCBI_GenBank
Match: EWM29761.1 (hypothetical protein Naga_100022g36 [Nannochloropsis gaditana])

HSP 1 Score: 412.9 bits (1060), Expect = 1.400e-111
Identity = 245/429 (57.11%), Postives = 290/429 (67.60%), Query Frame = 0 
Query:   83 VTLATILLALLI---LSQGGQSSPADVSDPSPIARKRAPAAGKRPKGAKPLSRPAGRRP------TLPVPERRKDEVKIGGSKTAAPAAAQVEVEEVEEGLLEEAMRERSINKYFSADPLWTGQLIASGMAWFLVLTAASLPADVAGERPVLMILTVRHAFGLAADVRRVLREAAEGEVDRRKIRKLARGLTRVPGAPSYLLYSAALLTWPATNSPKGVVKALGPLLLREFYTALAAGLDMLQILGVSSEAASGPAAAARCGPRRFMPGSLSTISLVFEASLGLSLVVALLRSRNEGGMLLRRCLATLLYANFLYNRVGHLPGLKVCVTCLSPSVGPRSHFLMRESLPFSLPPNSHPIQQEALGRRSVGGSVAALLKPLFKDLEPTTRQLTAIGRASLAELDTVPGVGEKVRSTLRLLGFLEDEQGVTE 503
            V  A   LALL+   L +G  SSP   +   P   +R     +R +    +S   GR+          +  RR D+ +     +AA A    E    EE LLEEA+RERSINKYF+ADPLWTGQL+AS +AW LVL AASLP D+  +RP+L +L  RHA GLAADVRRVL  AA+G V+RR+I +L  GLT VPGAP+YLLY+AALL WPAT+SPKGVV  L PLLLREF+TALAA LD+LQILGVSSEAASGP +AARCGPRR MPGSLSTISL+ EASLGLSL VALLR RN+GG LLRRCLA LL+ANFLYNR+GH+ GLK                                   EA+ RRSVGGS  ALLKP++KD+EP TRQLTA+ RA+LA LDT+PG GE+VRS L+LLGFLED+    E
Sbjct:   13 VMRAAFFLALLLLQDLGEGHPSSPVGKALDQPFLARRREIRVQRQR----VSNSGGRQTRGKTHGDAKLHRRRIDQGQKERESSAAAAMPDQEPRVEEEDLLEEAIRERSINKYFAADPLWTGQLVASALAWALVLAAASLPPDIGRDRPILRVLAARHALGLAADVRRVLLVAADGAVNRRRIHELVGGLTSVPGAPAYLLYTAALLAWPATDSPKGVVNGLAPLLLREFFTALAAVLDLLQILGVSSEAASGPGSAARCGPRRPMPGSLSTISLLLEASLGLSLAVALLRCRNQGGTLLRRCLAALLFANFLYNRIGHISGLK-----------------------------------EAICRRSVGGSALALLKPIWKDMEPATRQLTAVSRATLARLDTIPG-GERVRSMLQLLGFLEDDAETKE 401
The following BLAST results are available for this feature:
BLAST of NO03G03100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29761.11.400e-11157.11hypothetical protein Naga_100022g36 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005584NSK005584Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572437gene_1503Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100022g36gene886Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03100.4NO03G03100.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G03100.3NO03G03100.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G03100.2NO03G03100.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G03100.1NO03G03100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03100.4NO03G03100.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G03100.3NO03G03100.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G03100.2NO03G03100.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G03100.1NO03G03100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03100 ID=NO03G03100|Name=NO03G03100|organism=Nannochloropsis oceanica|type=gene|length=3112bp
CTCACTGACGTATCTGCCGTTCTCTTGATTTGCTTATTTTCATGCCTTTG
GTTTGATGTTCGTCTACTACTGTACATCTGCTGCCCCTTGCGCGCCCTCA
CGCAATCCCTGATATGATGCGACCTTCCCACATCCCGCAACCCAACCAGC
CCCACTCTCTCTGCTTGCCAATCAAGTACACAAATTATCTGCATCTGCAA
AGTACTGCAGCCTCTACGTATTGTCCGCACCCATGATCGACTCCTCGTGA
TCCAATCCTCCAACGTCTGCATGGTGGCCAACCAAAGCTGTCAGTACAGA
CGCATCCGCCCACTTGGTACAGGCCTCTAAACCCTCAACTCAAGCAAGCG
TATTGTATTTCTCTCTCCCTCTTCTCCTCCATTTCTCCTCACCATTCATG
GTCCCCTCCTCCTTCTCCCACTACCGCTCCCTTAATTGCTCCCAGAGTTT
TTTGCCAAGTAGATGAGACGAATGACCCCAAAGAAGATAGCCGTGTACCC
CGCATGGGTAAGCGCAGCGCTGCTGCCACCCCGTTTACGACGTGGTGCGC
GGTTGCCTTCCCCCGACGAGCTGCGGATGCGATCAATGACAAACATGGTG
GCTGTGTGCTTAGCCTCCTGCCTATCTGTGCGTCTGAGTGCTTGTGCTGG
CCTCTGTGCCGACCTTCTGTGCAAGGTAGAAAAGGGGAGAAAAGAAATAG
AATAAGTACATGCGTGCTGGTAGGTGCGTGGTGCAATGCTGCGATTAGGT
GATGCGCTGGCTGAGTCGTGGGTCGAGCATGCGGTTGAGTGGGGATGAAT
ATCTGCCCTTGACCTTGCCGCAGGCCAACCCTTCCTGAGACTCCAAGCAA
CTGCAGCAGCAGGCGGGAACAGTTAGCCACGACACAATAAGCAATGAAAT
GACGCATGTGTTTGTATCTGTGTAGGTGGAAATACCAAATTATGCCCGTG
CGTGAAAAAGGGGGGGAAAAACGGTACCGGCTCCGATGGCCGCCATCCCA
TCGCCTCAATCATTTCTTCCATAGCCTGGCGCTCACAGACAGCTCTCCAG
GACACGACCTGACCCCTCCCAACCCATGTCCGTCACCATATAGGGCATTC
TCAGTTAGCATGCGGATGGTGGCATACTTCGACGTGCACAGGCGCTGGCT
TGTCACACTGGCAACCATTTTACTCGCCCTCCTCATCCTTTCTCAGGGAG
GGCAATCGTCCCCTGCGGACGTCTCGGACCCTTCTCCGATCGCACGAAAG
CGGGCGCCAGCAGCAGGAAAGCGGCCGAAAGGTGCCAAGCCACTCAGTAG
ACCAGCAGGGCGTAGGCCAACCTTACCCGTGCCTGAGAGGCGGAAGGACG
AGGTCAAGATCGGAGGGAGCAAGACGGCGGCGCCCGCAGCGGCCCAGGTG
GAGGTAGAGGAAGTTGAGGAAGGGCTGCTTGAGGAGGCCATGCGAGAGCG
GTCAATCAACAAATATTTTTCCGCGGACCCTTTGTGGACGGGACAACTAA
TCGCGAGCGGGATGGCGTGGTTTTTGGTGgtacgtggagatactgaggtg
ggcttttgaacctgaggaaaactgcgtgcacggtgatcatgtatttgctc
acatagacgactttgtgaatgtggaaatcaacatgtgtttaaaggttaat
accgcgcggctgtagatatgatgaatatttaccgtttcccacagaaaatc
atcacctgtgaagtcagaaatcgtctgtggaggcgcaatttttctgcccc
gcgtttaccagaccaacaagcacgcgtttgaggcctgcctgcaagagtaa
cgccacactctgccattcaagaatgatttcattttctcaagatcctcgcc
aacctccttttacatgatcactttttaatccgcgtccctaccaacccaca
actagCTCACGGCAGCTTCACTACCAGCAGACGTGGCGGGGGAGAGGCCA
GTGCTAATGATCCTGACAGTGCGTCATGCCTTTGGCCTGGCTGCGGATGT
GCGCCGGGTGTTGAGAGAAGCGGCGGAAGGAGAGGTGGACCGAAGGAAGA
TTCGCAAGgtaagagagagggattgatggagagagggcgatggagaaact
acaagtcttgaatacacatgggtaatatttgtcatttcttttctatttaa
taattttgttttcattttagcttacagacatttctctctcccgacccgaa
aatcagCTCGCCCGCGGCCTAACCCGTGTCCCAGGCGCCCCCTCCTACCT
CCTCTATTCCGCCGCCCTCCTCACTTGGCCTGCGACAAACTCACCCAAAG
GAGTAGTCAAAGCCCTCGGCCCTCTTCTCCTACGTGAGTTTTATACGGCA
TTGGCAGCAGGACTGGACATGCTGCAGATCTTGGGAGTGTCTTCCGAAGC
GGCCTCTGGCCCCGCGGCGGCTGCGAGGTGTGGGCCGCGACGTTTCATGC
CCGGCTCGCTTTCAACCATCAGTTTGGTGTTCGAGgtaagctttttttag
ttcctttttgcacgcatattttgttgtcactgcgagtgatttcacgtcag
ccttggtcctcatagGCGTCGTTGGGACTCTCCTTGGTGGTGGCACTCTT
GCGGAGTCGGAACGAAGGCGGGATGCTGCTACGACGGTGTCTGGCCACCC
TGCTCTATGCCAACTTCCTTTACAACCGCGTCGGTCATCTTCCAGGGCTT
AAGgtatgcgtaacatgtttgtccccatccgtgggtccgcgctctcactt
tctgatgagagaatcactccccttctctttgccacccaattcacatccta
tccaacagGAAGCTTTAGGTCGACGCTCCGTAGGCGGCTCAGTCGCTGCC
TTGCTCAAGCCCTTATTCAAGGACCTGGAGCCAACCACCCGGCAACTCAC
TGCCATTGGCCGCGCTTCACTCGCCGAGCTTGACACGGTGCCAGGGGTGG
GGGAGAAGGTCAGGTCGACGTTGCGGCTCTTGGGGTTCTTGGAAGACGAG
CAAGGCGTAACAGAGGAAGGTTCGCAGGGGAATGGGGGTCTCAGTTGAGG
AAGACAGAAAACGCAGACGCAGAGAGCAGTGTACAAAAGAAAAAAACACA
AAGTACTCATTT
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protein sequence of NO03G03100.4

>NO03G03100.4-protein ID=NO03G03100.4-protein|Name=NO03G03100.4|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MCLYLCRWKYQIMPVREKGGEKRYRLRWPPSHRLNHFFHSLALTDSSPGH
DLTPPNPCPSPYRAFSVSMRMVAYFDVHRRWLVTLATILLALLILSQGGQ
SSPADVSDPSPIARKRAPAAGKRPKGAKPLSRPAGRRPTLPVPERRKDEV
KIGGSKTAAPAAAQVEVEEVEEGLLEEAMRERSINKYFSADPLWTGQLIA
SGMAWFLVLTAASLPADVAGERPVLMILTVRHAFGLAADVRRVLREAAEG
EVDRRKIRKLARGLTRVPGAPSYLLYSAALLTWPATNSPKGVVKALGPLL
LREFYTALAAGLDMLQILGVSSEAASGPAAAARCGPRRFMPGSLSTISLV
FEVSFF*
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protein sequence of NO03G03100.3

>NO03G03100.3-protein ID=NO03G03100.3-protein|Name=NO03G03100.3|organism=Nannochloropsis oceanica|type=polypeptide|length=513bp
MCLYLCRWKYQIMPVREKGGEKRYRLRWPPSHRLNHFFHSLALTDSSPGH
DLTPPNPCPSPYRAFSVSMRMVAYFDVHRRWLVTLATILLALLILSQGGQ
SSPADVSDPSPIARKRAPAAGKRPKGAKPLSRPAGRRPTLPVPERRKDEV
KIGGSKTAAPAAAQVEVEEVEEGLLEEAMRERSINKYFSADPLWTGQLIA
SGMAWFLVLTAASLPADVAGERPVLMILTVRHAFGLAADVRRVLREAAEG
EVDRRKIRKLARGLTRVPGAPSYLLYSAALLTWPATNSPKGVVKALGPLL
LREFYTALAAGLDMLQILGVSSEAASGPAAAARCGPRRFMPGSLSTISLV
FEASLGLSLVVALLRSRNEGGMLLRRCLATLLYANFLYNRVGHLPGLKVC
VTCLSPSVGPRSHFLMRESLPFSLPPNSHPIQQEALGRRSVGGSVAALLK
PLFKDLEPTTRQLTAIGRASLAELDTVPGVGEKVRSTLRLLGFLEDEQGV
TEEGSQGNGGLS*
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protein sequence of NO03G03100.2

>NO03G03100.2-protein ID=NO03G03100.2-protein|Name=NO03G03100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MCLYLCRWKYQIMPVREKGGEKRYRLRWPPSHRLNHFFHSLALTDSSPGH
DLTPPNPCPSPYRAFSVSMRMVAYFDVHRRWLVTLATILLALLILSQGGQ
SSPADVSDPSPIARKRAPAAGKRPKGAKPLSRPAGRRPTLPVPERRKDEV
KIGGSKTAAPAAAQVEVEEVEEGLLEEAMRERSINKYFSADPLWTGQLIA
SGMAWFLVLTAASLPADVAGERPVLMILTVRHAFGLAADVRRVLREAAEG
EVDRRKIRKLARGLTRVPGAPSYLLYSAALLTWPATNSPKGVVKALGPLL
LREFYTALAAGLDMLQILGVSSEAASGPAAAARCGPRRFMPGSLSTISLV
FEPWSS*
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protein sequence of NO03G03100.1

>NO03G03100.1-protein ID=NO03G03100.1-protein|Name=NO03G03100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=478bp
MCLYLCRWKYQIMPVREKGGEKRYRLRWPPSHRLNHFFHSLALTDSSPGH
DLTPPNPCPSPYRAFSVSMRMVAYFDVHRRWLVTLATILLALLILSQGGQ
SSPADVSDPSPIARKRAPAAGKRPKGAKPLSRPAGRRPTLPVPERRKDEV
KIGGSKTAAPAAAQVEVEEVEEGLLEEAMRERSINKYFSADPLWTGQLIA
SGMAWFLVLTAASLPADVAGERPVLMILTVRHAFGLAADVRRVLREAAEG
EVDRRKIRKLARGLTRVPGAPSYLLYSAALLTWPATNSPKGVVKALGPLL
LREFYTALAAGLDMLQILGVSSEAASGPAAAARCGPRRFMPGSLSTISLV
FEASLGLSLVVALLRSRNEGGMLLRRCLATLLYANFLYNRVGHLPGLKEA
LGRRSVGGSVAALLKPLFKDLEPTTRQLTAIGRASLAELDTVPGVGEKVR
STLRLLGFLEDEQGVTEEGSQGNGGLS*
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Synonyms
Publications