NO03G02990, NO03G02990 (gene) Nannochloropsis oceanica

Overview
NameNO03G02990
Unique NameNO03G02990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5571
Alignment locationchr3:894218..899788 -

Link to JBrowse

Properties
Property NameValue
DescriptionAtpase aaa domain containing 5
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:894218..899788 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005515protein binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014756Ig_E-set
IPR036427Bromodomain-like_sf
IPR003959ATPase_AAA_core
IPR002909IPT
IPR003593AAA+_ATPase
IPR001487Bromodomain
Homology
BLAST of NO03G02990 vs. NCBI_GenBank
Match: EWM29726.1 (atpase aaa domain containing 5 [Nannochloropsis gaditana])

HSP 1 Score: 706.4 bits (1822), Expect = 1.800e-199
Identity = 542/1552 (34.92%), Postives = 722/1552 (46.52%), Query Frame = 0
Query:    1 MGKEKRDKPNQQPSLASFF-KKAGGGSAQVSPSRTRKVGNDAADAWQG-------ASAWRSQCQALLDRLQGEDGEGWFAAPVDAEELGLDDYFRVITEPMDLGTVQAKLERGGYADAQAFARDVFLVFENACRYNESPDHLVHQTAAALARSFRKRFQAAFPLFEAGQVQAENAAAVASIGQRSVGNNHLDEEDGRGGDHEDDESIVEVMAASGAGCATAKDSEGRVFIAGPGAIRGHVHPFFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSKRKAGLLKAEADEKERQQRRQLLESFNKGKEIHPFFERPKAPSGGQGVGRGRDGG-AVEDEREWLAPLFPTVAHVTQEDMDEKKGQVVEKEEATHIANVVIPRLTAIHAHSAREVAAATAADGGANGAVVDLDAEE-------AEEVATRDIMRWSESAFVRRKGNFPLLD-DAGYFEPWAAGAQEAVEELAIAAGVYQPPSSSSSTPLFDHETTRQRMRLMKKQHDKVPAGTAVQWVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWR--AAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVILLEHILPRAGPSTGRMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLWASRLSALQQQQQWRASPQLLPSYLQSPLSLSSSSPXXXXXXXPPAANPAAALHSNAREDDEGEEAVLEGAHRAPSAGAAAAADNGPSIFGYRCPVVESVRPFSGRLVGGTRITIKGQNFLQSSDEAAGTWAPVDVLVGHMPCSDVKVLSDDMIKATTPPCPPSLSSAANRQFPIVVRVAKFASNEAIRQLACHSSFLYQNKQRCIDELFPELKVPRHRLKRLAGALCIQQXXXXXXXXXXXXXXXXXXXXXXXXXXWEAKGSERAPPTRCGDRIASEEAKCQAKRRRVVLXXXXXXXXXXXXXXXXXXXAKAQRDILISHNGSRVEGQEEGGGALTTTSMATRYMVLPDGTDSTQIVVGTTNGTLSAPEDVWQPEEE-----------------------------KVADGATATAAIVAVE------------DQDEGND--------------------ARSVA--QERVWRQVLKPPSFKGQGQFDTAVLATLEEHAEALSCCDFLRTFAPGLDGDDFVQAPCSSLLRRGVTAQVQQDGEVSPWPQVPGVGDEVGNVLEAFLAQREQAVGVLLAAGGPRRGITFLHEAALAVGLRQEKAMGVVLPLLAPSFSLPYPTRRDVHLDYAPSLHAMQEAD-----LVQNAGARISRRTRTYFTKVV 1466
            MG+EKR     QPSLA FF KK G    + S  R R    +  +              WR++C  L++RL  ED EGWFA PV+AE+LGLDDYFR++TEPMDLGT++A L+   Y   +AFARDV+LVF+NA RYNESPDH VHQ A ALA SF + F A FP     + +  + +    + +R  G     E DG G     +ES VE++ ASGAG +T K  E    ++   +I   +HPFF K                                                                                                  A SKRKA LL+A A+E ER+ RR+ LES N G+E+HPFFE+ +A S G+   R  +G  +++DER W  PLFP V HV QED  E++   V  +    +  ++IP+L A+ A   R+  +          + V    EE         E A+R IM     A +  +G   LL       +  AA +++ V  LA +A +             D +  R+ ++ MK+Q ++  +G A QWVD+YRP+ P+ L W L++ AL LQ+WLE WQ+WR   +   +                                  L+ GP G GK+A+VYATAA+LGFE+IEVNTSQ+RSG EIKKLFSEATQSQHI QA S  +F     A+ L                                DEV+ LE  +PR+  S  RMTLILIEEVDLVF+ED GFHR LREFM +AKWPLVLTAN  P WL E   C  R V  CPT  LA +L MIWATEGLP LP   F  LA S  GDVRSAIM+LQ+W+   S  +Q                S LSL  +                      A +D   E+  L+       A    +     SIFGY  PVV+ V P  G  VGGTRITI+G++FLQ+SDE+AG WAPVDV +G + C  VKVLSD  I A TP  P SL      Q P++V + +  ++    QLAC + F +Q+++R  D  FP+LK+P H LKR                                   ++    ++           SE  + Q KRRRVVL                      Q D+  S   + V  +        T +  T  +   D     Q V+    G +S   D     EE                             K  +G   T   V ++            D+D+GN+                     RSVA    R+WR+VL+PPS +G    DT  L  L +HA+ALSCCD L T  PGLDGDD+VQAPCSSLLR  + A+   + E SPWP+  G G EV  +L+  LA+R++ V        P        ++ +   L++++A+ VVL L+   FSL +P+R+DV +DY P L +MQ AD      VQ+ G R  R+ RTY+ +V+
Sbjct:    3 MGREKRVGGPNQPSLAIFFGKKPGRKKHETSQERVRDSNAEVFEVCPSRERIGTRVPRWRNRCMTLVERLLEEDEEGWFAGPVNAEQLGLDDYFRIVTEPMDLGTIKANLKEKAYVSPEAFARDVWLVFDNARRYNESPDHPVHQLAVALACSFGRAFNALFPRSGRSREEGGSPSRATPVPRRG-GLAEGPERDGEG----LEESDVEILPASGAGWSTKKPCEIDPPVSVGASIGEKLHPFFAK---------RTHNLSQRENFTTSLTAVSTKASITSALESDLPRTDAAGRSATGKGMLSGSRPTEETSCEESGATRSSQGRREMSDEELLAANDYFLSQALSKRKASLLRAHAEEVERRMRREWLESLNNGREMHPFFEKARAGSSGRSELRRSEGCISMQDERAWTCPLFPEVTHVHQEDDTEQQNAQVPADTIC-LGELLIPKLGAMPAFFGRDAGSLPLHASRCLVSEVTKTPEENRPSDAGEAEGASRGIM--LRKADLNERGRSMLLPVSNSNAQHGAAESEQTVHSLASSAEI-------------DAKVIRRHLKWMKRQRERGSSGVAAQWVDRYRPDEPDALVWPLRQAALSLQQWLEDWQEWRLTGSRGHSTKQKRKKRLHERSKRDAGDIDEGEWNDGEPRTTTLVCGPSGIGKSAVVYATAARLGFEVIEVNTSQLRSGVEIKKLFSEATQSQHIRQASSVCTFDQTTPAEQL---------WLTKSSKGANGPQKRKGAKQKDEDEVVWLEQPIPRS-RSANRMTLILIEEVDLVFEEDVGFHRALREFMSSAKWPLVLTANHPPDWLSEMECCRTRTVLPCPTVTLALMLSMIWATEGLPGLPPEHFCALACSSRGDVRSAIMSLQMWSFDFSPNRQGNTGHQGAPYRSG--ASALSLLQTGKNVD--------------FRKALKDQMLEQKRLQS---RTHADCNQSLPEKHSIFGYHRPVVDCVHPLCGSHVGGTRITIRGRHFLQASDESAGAWAPVDVRLGSLACLHVKVLSDTEITAVTPALPRSLYPG---QLPVIVTICRLVNSANTWQLACRACFRFQSERRPEDRNFPDLKLPGHHLKRWRSTRDETPTKQLQMKGKHVREKIQVETNVEGEEQYQVNADDQ-----------SENYEGQVKRRRVVLESESEDEEVERRY--------VQNDLPSSSPDAVVTDEVLDDKERGTATCETDILSHTDIRSQAQAVIAKREGPISYTRDERGDMEEISKEIDRIKVENEKLTEQLDVVRAEVPVGKTEEGRNVTGGAVRLQQEKDQDSKTEALDEDKGNNNWDTGEHGGLPDAGAQKHDQERSVATLPRRLWREVLRPPS-RGASCVDTCALEILSDHADALSCCDLLETLTPGLDGDDYVQAPCSSLLRHAIPAKAISE-ENSPWPRGSGGGHEVSTLLQILLARRQRPVCFKEICFPP-------VDSTMMESLKRKRALDVVLALMPSCFSLRWPSRQDVQVDYTPLLRSMQVADRFRCFAVQDLG-RGCRKKRTYWDRVL 1463          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: XP_015631508.1 (PREDICTED: uncharacterized protein LOC4332326 isoform X1 [Oryza sativa Japonica Group] >ABF95096.1 AT hook motif family protein, expressed [Oryza sativa Japonica Group] >BAH01561.1 unnamed protein product [Oryza sativa Japonica Group] >BAS83368.1 Os03g0262300 [Oryza sativa Japonica Group])

HSP 1 Score: 109.8 bits (273), Expect = 7.600e-20
Identity = 98/349 (28.08%), Postives = 142/349 (40.69%), Query Frame = 0
Query:  532 SSSSSTPLFDHETTRQRMRLMKKQHDKVPAG--TAVQWVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWRAAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVI---LLEHILPRAG-PSTG------RMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLW 869
            SS     LF+   ++Q  R+  +  +  P G  TA  W DKYRPE    +    K V   L  WL+ W +        +                                 LITGP GCGK+A V+A A + GF +IEVNTS +R+G  +++ F EAT+S  + +                                                +E+I   +   + P +G P T         TLIL E+VD VFDED GF  T+ + + T KWP++LT+NK    L    A  +       +AEL   + MI  +EG+ I  +     +  +F GD+R  +M LQ W
Sbjct:  337 SSCFHASLFE---SKQHERVQHELPEVTPKGCQTANLWTDKYRPETAAQVCGNSKHVK-FLNEWLKGWDE---RGHRNKQNIVTNGSMNGRSCQDGSDTDYSEDASDYENVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDMRNGAYVRQKFEEATKSHGLEK---------------------------------------------WSQEEIIGLPISNSLDPASGTPGTAEYKQVINKTLILFEDVDTVFDEDRGFISTILKMVETTKWPIILTSNKKDPPLPHLLAQLVLDFTYPSSAELLSHVDMICKSEGVEI-TVPQQKHIIDAFLGDIRRTMMLLQFW 632          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: EEE58738.1 (hypothetical protein OsJ_10221 [Oryza sativa Japonica Group])

HSP 1 Score: 109.8 bits (273), Expect = 7.600e-20
Identity = 98/349 (28.08%), Postives = 142/349 (40.69%), Query Frame = 0
Query:  532 SSSSSTPLFDHETTRQRMRLMKKQHDKVPAG--TAVQWVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWRAAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVI---LLEHILPRAG-PSTG------RMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLW 869
            SS     LF+   ++Q  R+  +  +  P G  TA  W DKYRPE    +    K V   L  WL+ W +        +                                 LITGP GCGK+A V+A A + GF +IEVNTS +R+G  +++ F EAT+S  + +                                                +E+I   +   + P +G P T         TLIL E+VD VFDED GF  T+ + + T KWP++LT+NK    L    A  +       +AEL   + MI  +EG+ I  +     +  +F GD+R  +M LQ W
Sbjct:  386 SSCFHASLFE---SKQHERVQHELPEVTPKGCQTANLWTDKYRPETAAQVCGNSKHVK-FLNEWLKGWDE---RGHRNKQNIVTNGSMNGRSCQDGSDTDYSEDASDYENVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDMRNGAYVRQKFEEATKSHGLEK---------------------------------------------WSQEEIIGLPISNSLDPASGTPGTAEYKQVINKTLILFEDVDTVFDEDRGFISTILKMVETTKWPIILTSNKKDPPLPHLLAQLVLDFTYPSSAELLSHVDMICKSEGVEI-TVPQQKHIIDAFLGDIRRTMMLLQFW 681          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: XP_015631509.1 (PREDICTED: uncharacterized protein LOC4332326 isoform X2 [Oryza sativa Japonica Group])

HSP 1 Score: 109.8 bits (273), Expect = 7.600e-20
Identity = 98/349 (28.08%), Postives = 142/349 (40.69%), Query Frame = 0
Query:  532 SSSSSTPLFDHETTRQRMRLMKKQHDKVPAG--TAVQWVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWRAAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVI---LLEHILPRAG-PSTG------RMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLW 869
            SS     LF+   ++Q  R+  +  +  P G  TA  W DKYRPE    +    K V   L  WL+ W +        +                                 LITGP GCGK+A V+A A + GF +IEVNTS +R+G  +++ F EAT+S  + +                                                +E+I   +   + P +G P T         TLIL E+VD VFDED GF  T+ + + T KWP++LT+NK    L    A  +       +AEL   + MI  +EG+ I  +     +  +F GD+R  +M LQ W
Sbjct:  337 SSCFHASLFE---SKQHERVQHELPEVTPKGCQTANLWTDKYRPETAAQVCGNSKHVK-FLNEWLKGWDE---RGHRNKQNIVTNGSMNGRSCQDGSDTDYSEDASDYENVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDMRNGAYVRQKFEEATKSHGLEK---------------------------------------------WSQEEIIGLPISNSLDPASGTPGTAEYKQVINKTLILFEDVDTVFDEDRGFISTILKMVETTKWPIILTSNKKDPPLPHLLAQLVLDFTYPSSAELLSHVDMICKSEGVEI-TVPQQKHIIDAFLGDIRRTMMLLQFW 632          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: EEC74904.1 (hypothetical protein OsI_10837 [Oryza sativa Indica Group])

HSP 1 Score: 108.2 bits (269), Expect = 2.200e-19
Identity = 97/349 (27.79%), Postives = 142/349 (40.69%), Query Frame = 0
Query:  532 SSSSSTPLFDHETTRQRMRLMKKQHDKVPAG--TAVQWVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWRAAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVI---LLEHILPRAG-PSTG------RMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLW 869
            SS     LF+   ++Q  R+  +  +  P G  TA  W DKYRPE    +    + V   L  WL+ W +        +                                 LITGP GCGK+A V+A A + GF +IEVNTS +R+G  +++ F EAT+S  + +                                                +E+I   +   + P +G P T         TLIL E+VD VFDED GF  T+ + + T KWP++LT+NK    L    A  +       +AEL   + MI  +EG+ I  +     +  +F GD+R  +M LQ W
Sbjct:  337 SSCFHASLFE---SKQHERVQHELPEVTPKGCQTANLWTDKYRPETAAQVCGNSEHVK-FLNEWLKGWDE---RGHRNKQNIVTNGSMNGRSCQDGSDTDYSEDASDYENVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDMRNGAYVRQKFEEATKSHGLEK---------------------------------------------WSQEEIIGLPISNSLDPASGTPGTAEYKQVINKTLILFEDVDTVFDEDRGFISTILKMVETTKWPIILTSNKKDPPLPHLLAQLVLDFTYPSSAELLSHVDMICKSEGVEI-TVPQQKHIIDAFLGDIRRTMMLLQFW 632          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: XP_020189497.1 (uncharacterized protein LOC109775148 isoform X2 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 106.3 bits (264), Expect = 8.400e-19
Identity = 86/313 (27.48%), Postives = 127/313 (40.58%), Query Frame = 0
Query:  567 WVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWRAAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVILLEHILPRAGPSTGRM-----------TLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLW 869
            W DKYRPE    +   ++ V   L  WL+ W +       ++                                 LITGP GCGK+A V+A A + GF +IEVNTS +R+G  +K+ F EAT+S  + +         + +    P                               D+    EH+LP    S+ ++           TLIL E+VD VFDED GF  T+ +   T +WP++LT+NK    L       +   +   + EL   +GMI  +EG+ +        L  +  GD+R   M LQ W
Sbjct:  392 WTDKYRPETAAQVCGNIEHVK-FLSEWLKGWDE---RGHKSKQTGVANESINASFCQDESDTDCSEDASDYENVLLITGPVGCGKSAAVFACAREHGFNVIEVNTSDMRNGAYVKQKFEEATKSHGLEK--------WSQEEVTTPPRIDSLDPALETPDRTEYKHSVSCSTRKASNDD----EHMLPVKCYSSSKLSDEAPKQVINKTLILFEDVDTVFDEDRGFISTILKIAETTRWPIILTSNKKDPALPHLLDQLVLDFKYPSSGELLSHVGMICKSEGVDV-TAPQLKYLINACLGDIRRTTMLLQFW 687          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: XP_020189495.1 (uncharacterized protein LOC109775148 isoform X1 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 106.3 bits (264), Expect = 8.400e-19
Identity = 86/313 (27.48%), Postives = 127/313 (40.58%), Query Frame = 0
Query:  567 WVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWRAAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVILLEHILPRAGPSTGRM-----------TLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLW 869
            W DKYRPE    +   ++ V   L  WL+ W +       ++                                 LITGP GCGK+A V+A A + GF +IEVNTS +R+G  +K+ F EAT+S  + +         + +    P                               D+    EH+LP    S+ ++           TLIL E+VD VFDED GF  T+ +   T +WP++LT+NK    L       +   +   + EL   +GMI  +EG+ +        L  +  GD+R   M LQ W
Sbjct:  393 WTDKYRPETAAQVCGNIEHVK-FLSEWLKGWDE---RGHKSKQTGVANESINASFCQDESDTDCSEDASDYENVLLITGPVGCGKSAAVFACAREHGFNVIEVNTSDMRNGAYVKQKFEEATKSHGLEK--------WSQEEVTTPPRIDSLDPALETPDRTEYKHSVSCSTRKASNDD----EHMLPVKCYSSSKLSDEAPKQVINKTLILFEDVDTVFDEDRGFISTILKIAETTRWPIILTSNKKDPALPHLLDQLVLDFKYPSSGELLSHVGMICKSEGVDV-TAPQLKYLINACLGDIRRTTMLLQFW 688          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: CBJ28468.1 (similar to chromosome fragility associated gene 1 [Ectocarpus siliculosus])

HSP 1 Score: 102.4 bits (254), Expect = 1.200e-17
Identity = 112/251 (44.62%), Postives = 144/251 (57.37%), Query Frame = 0
Query:  642 LITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQA-----PSTASFVAALQAQAL--------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVILLEHILPRAGPSTGRMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRE-SP-ACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLWASR 872
            ++ GPPG GKT+ VY  A  LG+E+IEVN SQ+RSG  I++LF EATQS H+S A     P T       ++  L               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        ++    P+  ++TLIL EEVD+VF+ED GF   LR+    AK P++LTA     + RE +P +C+I  +     AEL   L  + A E L +  L A   LA+   GD+R+ +  LQ    R
Sbjct:  879 MLCGPPGVGKTSAVYGCAKALGYEVIEVNPSQLRSGAAIRRLFGEATQSHHVSSAETSSKPGTDGVAGGRKSPPLDGMFPSDRAAAGWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEVMRVVTPAGNKLTLILFEEVDVVFEEDVGFLGALRDLRRAAKCPVILTAE---TYRREYAPLSCNIWHLPRPRLAELEACLTAVAAAERLDV-SLGALRALAQYHMGDLRACLFTLQACKGR 1125          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: XP_012698485.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101753390 [Setaria italica])

HSP 1 Score: 101.7 bits (252), Expect = 2.100e-17
Identity = 89/319 (27.90%), Postives = 127/319 (39.81%), Query Frame = 0
Query:  567 WVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWRAAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVILLEHILPRAGPSTGRMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLWASRLSALQQQQQWRASP 886
            W DKYRPE    +    + V  L + WL+ W D R    G                                   LITGP GCGK+A V+A A + GF +IEVNTS +R+G  +++ F EAT+S H  +  S    + +L+   L                                        +   A       TLIL E+VD VFDED GF  T+ +   T KWP++LT+N+    L           +   T+EL   + MI  +EG+ +  +     +     GD+R  +M LQ W       Q +QQ+   P
Sbjct:  412 WTDKYRPETAAQVCGNSEHVKFLAE-WLKGW-DERGHKTGA-----ANGDTNDSSYQDESDADSAYHASDCDNVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDMRNGAYVRQKFEEATKS-HGLEKWSQEEIINSLKGDFLDPDSGTPDRTEYQHSMSRATRLVIDCDQQKSPVGYYPGSKVSDEASKQVLNKTLILFEDVDTVFDEDRGFISTILKMAETTKWPIILTSNRKDPSLPNLLDQFALDFKYPLTSELLSHVAMICKSEGVDV-TVPELKHVVDICLGDIRRTVMLLQFW------YQGKQQFTERP 715          
BLAST of NO03G02990 vs. NCBI_GenBank
Match: KQK91499.1 (hypothetical protein SETIT_033993mg [Setaria italica])

HSP 1 Score: 101.7 bits (252), Expect = 2.100e-17
Identity = 89/319 (27.90%), Postives = 127/319 (39.81%), Query Frame = 0
Query:  567 WVDKYRPEVPNMLTWELKRVALLLQRWLESWQDWRAAAPGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITGPPGCGKTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTASFVAALQAQALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVILLEHILPRAGPSTGRMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTANKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDLARSFAGDVRSAIMNLQLWASRLSALQQQQQWRASP 886
            W DKYRPE    +    + V  L + WL+ W D R    G                                   LITGP GCGK+A V+A A + GF +IEVNTS +R+G  +++ F EAT+S H  +  S    + +L+   L                                        +   A       TLIL E+VD VFDED GF  T+ +   T KWP++LT+N+    L           +   T+EL   + MI  +EG+ +  +     +     GD+R  +M LQ W       Q +QQ+   P
Sbjct:  244 WTDKYRPETAAQVCGNSEHVKFLAE-WLKGW-DERGHKTGA-----ANGDTNDSSYQDESDADSAYHASDCDNVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDMRNGAYVRQKFEEATKS-HGLEKWSQEEIINSLKGDFLDPDSGTPDRTEYQHSMSRATRLVIDCDQQKSPVGYYPGSKVSDEASKQVLNKTLILFEDVDTVFDEDRGFISTILKMAETTKWPIILTSNRKDPSLPNLLDQFALDFKYPLTSELLSHVAMICKSEGVDV-TVPELKHVVDICLGDIRRTVMLLQFW------YQGKQQFTERP 547          
The following BLAST results are available for this feature:
BLAST of NO03G02990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29726.11.800e-19934.92atpase aaa domain containing 5 [Nannochloropsis ga... [more]
XP_015631508.17.600e-2028.08PREDICTED: uncharacterized protein LOC4332326 isof... [more]
EEE58738.17.600e-2028.08hypothetical protein OsJ_10221 [Oryza sativa Japon... [more]
XP_015631509.17.600e-2028.08PREDICTED: uncharacterized protein LOC4332326 isof... [more]
EEC74904.12.200e-1927.79hypothetical protein OsI_10837 [Oryza sativa Indic... [more]
XP_020189497.18.400e-1927.48uncharacterized protein LOC109775148 isoform X2 [A... [more]
XP_020189495.18.400e-1927.48uncharacterized protein LOC109775148 isoform X1 [A... [more]
CBJ28468.11.200e-1744.62similar to chromosome fragility associated gene 1 ... [more]
XP_012698485.12.100e-1727.90LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
KQK91499.12.100e-1727.90hypothetical protein SETIT_033993mg [Setaria itali... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005598NSK005598Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02990.1NO03G02990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|8875gene_1492Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100022g48gene897Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02990.1NO03G02990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02990 ID=NO03G02990|Name=NO03G02990|organism=Nannochloropsis oceanica|type=gene|length=5571bp
ATGGGGAAGGAGAAGCGGGACAAGCCCAACCAGCAGCCCTCCTTGGCTTC
TTTTTTCAAGAAAGCGGGGGGTGGCAGTGCGCAGGTGAGCCCATCAAGGA
CGAGGAAGGTAGGAAATGATGCTGCAGACGCGTGGCAGGGGGCTTCTGCG
TGGCGTAGTCAATGCCAGGCACTTTTAGATCGGTTGCAGGGCGAGGACGG
AGAAGGCTGGTTTGCCGCGCCCGTGGACGCGGAGGAGCTTGGATTGGACG
ATTACTTCCGTGTGATCACAGAGCCAATGGACTTGGGCACTGTGCAGGCC
AAGCTTGAGCGGGGGGGATATGCGGATGCGCAAGCTTTTGCGCGGGACGT
CTTTCTGGTATTCGAGAACGCCTGCCGGTACAACGAGAGTCCTGACCATC
TCGTGCACCAAACGGCTGCCGCGTTGGCCCGCAGCTTCAGAAAGCGCTTC
CAGGCTGCCTTTCCTCTATTTGAGGCTGGGCAAGTCCAAGCAGAAAACGC
GGCAGCAGTGGCCTCGATTGGTCAAAGAAGTGTAGGCAATAATCACCTTG
ATGAGGAGGACGGCCGTGGCGGTGACCACGAGGACGACGAGAGCATCGTG
GAAGTTATGGCAGCCTCCGGTGCCGGCTGCGCTACGGCGAAGGATTCAGA
AGGCCGAGTATTCATTGCCGGGCCTGGGGCAATAAGGGGCCATGTCCATC
CCTTTTTCGTGAAGCGCTCGCAGCAGCAGGCGCAGAAAGAGGAGGGGGCG
AGAGCAGCAGCAGCGGCGACCATAAGgtgtgtaaattgtgtttagaccac
aaaaggctaagcattgtcttttttggctgttttaaaattttcatgtgcca
taaacataaatcgcacctttcctcctccctcacaccttcccataaacagC
GCTCTTGCCGCAGAGGTGGCTCTGGACAGAAGCAGCGACAACTCTCCCGA
GCAGCCCACCGTGGCAGAGCGTACCAGCAGCAACAGCGACAGCAGCGATT
GTAGCAGTAGCAAGAAGAGGAACAGCTCTGGTGAGACCGAAGACAGCAGC
ATCAGAAGGCAAGGTGGTGCAAAAAAGCGAGAATTGACAGACGAGGAACT
GCTGTGCGCCAACGACTACTTCCTCAGTCAGGCCCAGAGTAAGCGCAAAG
CTGGCCTTCTCAAGGCCGAGGCAGATGAAAAGGAGAGGCAACAGCGTCGT
CAGTTGCTGGAGAGCTTTAATAAGGGTAAAGAGATCCATCCTTTCTTTGA
GCGACCCAAGGCTCCAAGTGGTGGGCAAGGGGTTGGTCGGGGAAGGGATG
GAGGGGCAGTTGAGGATGAGAGGGAGTGGCTCGCTCCCTTGTTTCCGACG
GTGGCACACGTGACTCAAGAAGATATGGACGAGAAGAAGGGGCAAGTTGT
GGAGAAAGAGGAGGCGACGCACATCGCTAACGTCGTAATACCGAGGTTGA
CCGCGATCCATGCACACTCGGCAAGAGAAGTTGCTGCTGCTACTGCGGCT
GATGGGGGTGCGAACGGCGCGGTGGTCGATTTGGACGCGGAGGAGGCAGA
GGAAGTGGCTACGCGAGATATCATGCGGTGGAGCGAAAGCGCGTTTGTGC
GGCGAAAGGGCAACTTCCCGCTGTTGGACGACGCGGGCTACTTTGAGCCC
TGGGCTGCGGGAGCCCAAGAGgtgaggttttaggaggcgtagcgagagct
gccatgatttccttcccgacaagcatgaaattttttatttaatctctttt
gttctaagatggaaaatacatgcatcattgatttctcggttctgtctgac
acattaaaacacaccttccctccccgtacgcagGCGGTTGAGGAGCTAGC
CATAGCAGCTGGCGTCTACCAGCCTCCATCTTCCTCCTCATCCACACCCC
TGTTCGACCATGAGACGACTAGACAGCGCATGAGATTGATGAAGAAGCAG
CACGACAAGGTACCTGCTGGCACGGCGGTGCAATGGGTCGATAAGTACCG
GCCCGAGGTGCCCAACATGCTGgtaagttgtcgagtcggggtgtgtggga
gagggagaaacataagttcttcctcttagcacggcatccacagcacaaaa
gatttttcatgtgcaccattcctcttttttatctgctccttggttctgtc
cttcaacgcagACGTGGGAACTGAAGCGCGTGGCCCTCTTACTGCAGCGC
TGGCTGGAAAGCTGGCAAGACTGGCGTGCAGCCGCCCCCGGAACCCAGGC
CAAAAAAAAGAAGCCGCAACGCAAGAAGAGGCAGCAAGAGCAGGAAGGTG
AAGAGGACGAGGAAGAGATGAACGAGGGTGGACCGCGAAGCACCACCCTC
ATCACGGGCCCCCCGGGGTGCGGCAAGACGGCGCTTGTCTACGCGACGGC
GGCCAAGCTGGGGTTTGAGATCATCGAAGTAAACACCAGTCAGATCCGTT
CGGGTACTGAGATCAAGAAGCTATTCAGCGAGGCCACACAATCTCAGCAT
ATCAGCCAAGCGCCCTCCACCGCCTCGTTCGTGGCGGCCCTCCAGGCGCA
GGCGCTGCCAGCTCCTCTGCCCCCCGCCACgtacgtgcaagctgcacatt
ctgcacattctgcacattttttctctctctctctaactctctctctctca
ctttctccctctctctctccctctctaactccctctctctctctctcttc
ttaggctttgaaagctcgactaaaccttacgtcttccttcctcccttttc
tcacacgtgtttgtcaaacagGAAACCGGCCAAGGCCAAGAAGGGAGCCA
GGGGCAGGCCAAAGAAGGGAAAGGACCCCGAAAAAGAGGAGGAGGACGAG
GTCATTCTGCTGGAGCACATTCTTCCGCGGGCAGGGCCTTCGACGGGACG
CATGACCCTCATTCTCATCGAAGAAGTGGATTTGGTGTTCGACGgtaagc
aatgaaaattcgtgctttttcacagttgcattcatgccactgctcctttt
tctcaagtgtttgcccccctgccaccgcactattggaaacctccgtgtct
ctcatctccacccctttccccactaaaacacagAAGACGCAGGTTTCCAC
CGGACACTGCGCGAGTTCATGCTCACCGCGAAATGGCCCTTGGTCCTAAC
CGCCAACAAAACCCCCCTATGGCTCCGGGAATCCCCAGCCTGCCACATCC
GCCCCGTCGAAGCCTGCCCCACAGCCGAGCTTGCTTTCCTCCTGGGCATG
ATTTGGGCTACTGAAGGCCTTCCCATCCTGCCCCTTACCGCCTTCACTGA
TCTTGCTCGTTCATTCGCAGGCGATGTCCGTTCCGCAATCATGAATCTGC
AACTGTGGGCCTCCCGTCTCTCCGCACTGCAGCAGCAGCAGCAGTGGCGC
GCATCACCACAGCTGCTCCCCTCCTACTTGCAGTCACCATTATCACTGTC
GTCGTCGTCTCCACCCCTGTCGCTCTCGCTGTCCCCACCAGCAGCTAATC
CAGCGGCTGCACTTCATTCAAACGCAAGAGAGGACGACGAGGGAGAGGAG
GCTGTGCTTGAAGGCGCCCATCGCGCCCCCAGCGCTGGTGCAGCCGCTGC
TGCCGACAATGGCCCTTCTATCTTTGGATATCGCTGCCCGGTGGTGGAGA
GCGTGCGTCCCTTTTCTGGGCGCTTGGTGGGGGGCACACGTATCACTATT
AAGGGGCAGAATTTCTTGCAGTCCAGTGATGAGGCCGCGGGGACTTGGGC
GCCTGTGGATGTTCTTGTAGGGCACATGCCCTGTTCGGATGTGAAAGTGC
TTTCGGATGATATGATCAAGGCTACTACTCCACCATGCCCCCCGTCCCTT
TCTTCTGCTGCGAATAGACAGTTTCCTATCGTGGTGCGGGTGGCAAAGTT
TGCGAGTAACGAGGCTATTCGGCAGCTGGCGTGTCATTCTTCCTTTCTGT
ATCAAAATAAGCAGCGGTGTATCGATGAGCTTTTCCCGGAGTTGAAAGTG
CCTAGGCATCGGCTAAAGCGGCTTGCGGGGGCTCTTTGCATTCAGCAGCA
GCAGCAAGAGGAGGAGGAGGAGGAAAAGGAGGAGGGGGAAACAGATGAGA
GGGACGAGGAAGACTCCCAGCAAGGGTGGGAGGCAAAGGGCAGTGAGAGG
GCTCCTCCTACACGATGTGGGGATAGGATTGCGAGTGAGGAGGCAAAGTG
TCAGGCTAAGCGTCGGAGGGTGGTATTGGAGAGTGATGATGACAGAGACG
AGGACGAAGAGTGGGAAGGGAGCGAGGGAGAGGAGGCGAAAGCTCAGAGG
GATATATTAATTTCGCATAATGGAAGTAGAGTAGAAGGACAGGAAGAAGG
AGGAGGAGCGTTGACGACGACCTCAATGGCGACACGCTACATGGTTCTGC
CGGATGGCACCGACAGCACCCAGATTGTTGTGGGCACGACCAACGGGACC
CTCTCCGCCCCCGAGGACGTATGGCAGCCAGAGGAGGAGAAGGTTGCTGA
TGGTGCTACTGCCACTGCTGCTATTGTTGCTGTCGAGGACCAGGACGAGG
GGAATGACGCAAGGTCTGTGGCGCAGGAGCGGGTCTGGCGCCAGGTGCTC
AAGCCACCATCCTTCAAAGGTCAGGGGCAATTTGACACGGCTGTTCTGGC
GACGTTAGAGGAGCATGCCGAGGCCCTGTCGTGCTGCGACTTCCTCCGGA
CCTTTGCCCCCGGCCTTGACGGCGACGATTTTGTGCAGGCTCCTTGCTCT
TCCTTGTTGCGGCGTGGTGTAACGGCCCAGgtaagatcttgggagggtgg
gcgtttgagagggggaaaacaaaatatcactactttttcaaaataatgac
gttgttgtatttatcgtcacacattctccttccttcgataccccttctca
cacatccaatcatagGTGCAACAAGATGGAGAAGTCAGCCCCTGGCCGCA
GGTGCCGGGTGTGGGGGACGAGGTCGGCAACGTGCTGGAGGCATTTTTGG
CACAGCGGGAGCAAGCCGTGGGCGTGCTGCTGGCCGCAGGTGGCCCGCGG
CGAGGTATAACGTTCCTGCATGAAGCCGCTTTGGCCGTGGGGCTCCGACA
AGAGAAGGCCATGGGCGTGgtaagtaagaaaagggtggggggagggaagg
aaaagagacacgggtttagtgacagtagctccaaaaactgtgcattcccc
tgcgtagcgtaccgcctttgagcagatttcaacccgtacaaagacccata
catttgtttcccctccgcgtttccctttccttctccctctcttcaccttg
tcaatccaaacagGTTCTGCCACTGCTAGCTCCTAGCTTTTCCTTGCCCT
ATCCCACCCGTCGAGACGTGCATCTAGACTACGCCCCTTCCTTGCATGCG
ATGCAGGAAGCTGACTTAGTCCAAAATGCCGGGGCGCGTATCAGCCGCCG
AACCCGCACATATTTTACGAAGGTGGTTGAGTTCGGGGACGTTGACGAGT
TTCGCGAGGGCTTGACGGGTTTGACAGGCTTGGGTCGTACGGGTTTGGCG
ACTTCCACTAGTAAGAAGTGA
back to top

protein sequence of NO03G02990.1

>NO03G02990.1-protein ID=NO03G02990.1-protein|Name=NO03G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1496bp
MGKEKRDKPNQQPSLASFFKKAGGGSAQVSPSRTRKVGNDAADAWQGASA
WRSQCQALLDRLQGEDGEGWFAAPVDAEELGLDDYFRVITEPMDLGTVQA
KLERGGYADAQAFARDVFLVFENACRYNESPDHLVHQTAAALARSFRKRF
QAAFPLFEAGQVQAENAAAVASIGQRSVGNNHLDEEDGRGGDHEDDESIV
EVMAASGAGCATAKDSEGRVFIAGPGAIRGHVHPFFVKRSQQQAQKEEGA
RAAAAATISALAAEVALDRSSDNSPEQPTVAERTSSNSDSSDCSSSKKRN
SSGETEDSSIRRQGGAKKRELTDEELLCANDYFLSQAQSKRKAGLLKAEA
DEKERQQRRQLLESFNKGKEIHPFFERPKAPSGGQGVGRGRDGGAVEDER
EWLAPLFPTVAHVTQEDMDEKKGQVVEKEEATHIANVVIPRLTAIHAHSA
REVAAATAADGGANGAVVDLDAEEAEEVATRDIMRWSESAFVRRKGNFPL
LDDAGYFEPWAAGAQEAVEELAIAAGVYQPPSSSSSTPLFDHETTRQRMR
LMKKQHDKVPAGTAVQWVDKYRPEVPNMLTWELKRVALLLQRWLESWQDW
RAAAPGTQAKKKKPQRKKRQQEQEGEEDEEEMNEGGPRSTTLITGPPGCG
KTALVYATAAKLGFEIIEVNTSQIRSGTEIKKLFSEATQSQHISQAPSTA
SFVAALQAQALPAPLPPATKPAKAKKGARGRPKKGKDPEKEEEDEVILLE
HILPRAGPSTGRMTLILIEEVDLVFDEDAGFHRTLREFMLTAKWPLVLTA
NKTPLWLRESPACHIRPVEACPTAELAFLLGMIWATEGLPILPLTAFTDL
ARSFAGDVRSAIMNLQLWASRLSALQQQQQWRASPQLLPSYLQSPLSLSS
SSPPLSLSLSPPAANPAAALHSNAREDDEGEEAVLEGAHRAPSAGAAAAA
DNGPSIFGYRCPVVESVRPFSGRLVGGTRITIKGQNFLQSSDEAAGTWAP
VDVLVGHMPCSDVKVLSDDMIKATTPPCPPSLSSAANRQFPIVVRVAKFA
SNEAIRQLACHSSFLYQNKQRCIDELFPELKVPRHRLKRLAGALCIQQQQ
QEEEEEEKEEGETDERDEEDSQQGWEAKGSERAPPTRCGDRIASEEAKCQ
AKRRRVVLESDDDRDEDEEWEGSEGEEAKAQRDILISHNGSRVEGQEEGG
GALTTTSMATRYMVLPDGTDSTQIVVGTTNGTLSAPEDVWQPEEEKVADG
ATATAAIVAVEDQDEGNDARSVAQERVWRQVLKPPSFKGQGQFDTAVLAT
LEEHAEALSCCDFLRTFAPGLDGDDFVQAPCSSLLRRGVTAQVQQDGEVS
PWPQVPGVGDEVGNVLEAFLAQREQAVGVLLAAGGPRRGITFLHEAALAV
GLRQEKAMGVVLPLLAPSFSLPYPTRRDVHLDYAPSLHAMQEADLVQNAG
ARISRRTRTYFTKVVEFGDVDEFREGLTGLTGLGRTGLATSTSKK*
back to top
Synonyms
Publications