Naga_100022g48, gene897 (gene) Nannochloropsis gaditana

Overview
NameNaga_100022g48
Unique Namegene897
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:762112..767821 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100022g48
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:762112..767821 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL052ngnoL052Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02990NO03G02990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna934rna934-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna934rna934Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna934

>rna934-protein ID=rna934-protein|Name=rna934|organism=Nannochloropsis gaditana|type=polypeptide|length=1484bp
MRMGREKRVGGPNQPSLAIFFGKKPGRKKHETSQERVRDSNAEVFEVCPS
RERIGTRVPRWRNRCMTLVERLLEEDEEGWFAGPVNAEQLGLDDYFRIVT
EPMDLGTIKANLKEKAYVSPEAFARDVWLVFDNARRYNESPDHPVHQLAV
ALACSFGRAFNALFPRSGRSREEGGSPSRATPVPRRGGLAEGPERDGEGL
EESDVEILPASGAGWSTKKPCEIDPPVSVGASIGEKLHPFFAKRTHNLSQ
RENFTTSLTAVSTKASITSALESDLPRTDAAGRSATGKGMLSGSRPTEET
SCEESGATRSSQGRREMSDEELLAANDYFLSQALSKRKASLLRAHAEEVE
RRMRREWLESLNNGREMHPFFEKARAGSSGRSELRRSEGCISMQDERAWT
CPLFPEVTHVHQEDDTEQQNAQVPADTICLGELLIPKLGAMPAFFGRDAG
SLPLHASRCLVSEVTKTPEENRPSDAGEAEGASRGIMLRKADLNERGRSM
LLPVSNSNAQHGAAESEQTVHSLASSAEIDAKVIRRHLKWMKRQRERGSS
GVAAQWVDRYRPDEPDALVWPLRQAALSLQQWLEDWQEWRLTGSRGHSTK
QKRKKRLHERSKRDAGDIDEGEWNDGEPRTTTLVCGPSGIGKSAVVYATA
ARLGFEVIEVNTSQLRSGVEIKKLFSEATQSQHIRQASSVCTFDQTTPAE
QLWLTKSSKGANGPQKRKGAKQKDEDEVVWLEQPIPRSRSANRMTLILIE
EVDLVFEEDVGFHRALREFMSSAKWPLVLTANHPPDWLSEMECCRTRTVL
PCPTVTLALMLSMIWATEGLPGLPPEHFCALACSSRGDVRSAIMSLQMWS
FDFSPNRQGNTGHQGAPYRSGASALSLLQTGKNVDFRKALKDQMLEQKRL
QSRTHADCNQSLPEKHSIFGYHRPVVDCVHPLCGSHVGGTRITIRGRHFL
QASDESAGAWAPVDVRLGSLACLHVKVLSDTEITAVTPALPRSLYPGQLP
VIVTICRLVNSANTWQLACRACFRFQSERRPEDRNFPDLKLPGHHLKRWR
STRDETPTKQLQMKGKHVREKIQVETNVEGEEQYQVNADDQSENYEGQVK
RRRVVLESESEDEEVERRYVQNDLPSSSPDAVVTDEVLDDKERGTATCET
DILSHTDIRSQAQAVIAKREGPISYTRDERGDMEEISKEIDRIKVENEKL
TEQLDVVRAEVPVGKTEEGRNVTGGAVRLQQEKDQDSKTEALDEDKGNNN
WDTGEHGGLPDAGAQKHDQERSVATLPRRLWREVLRPPSRGASCVDTCAL
EILSDHADALSCCDLLETLTPGLDGDDYVQAPCSSLLRHAIPAKAISEEN
SPWPRGSGGGHEVSTLLQILLARRQRPVCFKEICFPPVDSTMMESLKRKR
ALDVVLALMPSCFSLRWPSRQDVQVDYTPLLRSMQVADRFRCFAVQDLGR
GCRKKRTYWDRVLSIEMKHLEDDLVLLASDSPFS
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Synonyms
Publications