NO03G02860, NO03G02860 (gene) Nannochloropsis oceanica

Overview
NameNO03G02860
Unique NameNO03G02860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5709
Alignment locationchr3:859884..865592 +

Link to JBrowse

Properties
Property NameValue
DescriptionNuclear receptor corepressor 1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:859884..865592 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeodomain-like
IPR017884SANT_dom
IPR001005SANT/Myb
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO03G02860 vs. NCBI_GenBank
Match: EWM29768.1 (nuclear receptor corepressor 1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 671.8 bits (1732), Expect = 5.400e-189
Identity = 532/1424 (37.36%), Postives = 691/1424 (48.53%), Query Frame = 0
Query:   33 GSSGGGANDRGRFHRGGKSIMMRDNGRGPPLSKDYRQLLSPGDQWEESRVVESGGGSGGSRSHKNRSYRREGEAEERESRGCAFMDYKGRDRGRSSSREDARFSATRTAWSSAVPPPPSRLSLRLEDAGDRSSXXXXXSSSNYPNP--QAARRFSMGSEGPSWHRDDSPLRNPRSRTSEDPFFGGSAEADRMQRMKVDRRRMNEAEAEGERHSSLAQRDGGKDRWRPPESWESEPQNHASSSSAHPSLLQGMGRSSLPSRTTNVSAAAESWLRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKEVFIQPLLCRPLDAGSGTRQAPWSFNDVASSLSLLALPAGGAASATASSILTFGQIVDSATSFHHRRLLTEEMKVSQSSVFQAQREARREAASGAALSISASHEGMNGGVSDEHLLPRATSFQSLFRGYGVTGGEGLLSA-STSGSVQPLEPRLQRSLSE----APSGRLRLGWGQGLARRAISTQEQPSPR----VVPP------NLSKVGDRLDRLDSSGKSIDNTLPMERAREEVVVEPTEDVAGAVDVTNGKS-----------SVLKQRVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLAFVRHLWRESATRGVERASTAASAFASV----TPTAXXXXXXXXXXXAPMSGKKDPLTERERGAGEAVASPKMRRERSSEATWQGEEGTRTLKRQKSALSVHQEAAAAAKLAEKKAARAKLEKYRTLSCSSGFPLCGLLPMESMRRAVKATACVREKQPGTEAETTGMGTEVEAELVRLPSREDILAVLESLNSKVEHLQXXXXXXXXXXXNATVAAASYRAPWWSNTYASVIRLRRXXXXXXXXXXXXXXXXXXXXXXXXXREGAHMLCPVSGD---DAAVTALAALNAPVSIADA---VQGGSVEADGNKRSEREALTKRELIKSAVQEKKAQIRRYIEQLADKYLDINETWKRKQPGADDXXXHGHFLQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFAASEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVWLKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDVEMTSAVSRTSSTNSSHAKDLASCFPAGPRRGGEIM----GLPASSPRAGGSRQMEEEDSEGKKVMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFFSNYKKKYRLDERLP 1415
            G++ GG+      +RG KS+  R N   P   KDYR LLS  D+ +        G S G RS +N SYRR+   ++RE R   F+D+KGR+R     R  +R  + R +W +A P   S     L++  +R       +S++ P+   QA RR +MG        DD   RN R R  +D     +A  DR+ ++ +DRR+    E E  RHS+ A+   GK +     SWE  P   AS +S  PSL Q  GRSS+ S T  +SAA+    +S                               V EVF Q LLCRPLD G G R+APW ++D++ + +     A        + +  F        +F H   LT             +        S  +L  S   EG   G      LP  T         GV G   LLS    +  V   EPR++R+ SE    A SGRLRLGWGQGLARRA +  EQ SPR    ++P       N     D+ + ++ S K +++ L         + +P   V+ A  + N  S            +                                      +A+VRH+WR++A +   R S    + +SV     P              P   KK  + + E    +A +S   +R+ S     + E G   +KRQKSA        +A K AE++AA+AKL+KYR LS ++G+PLCGLLP ESM RA+K TACVR  +P  +     +  + EAE+V LP REDIL+ LE +N+ VE LQ           +    +A+YRAPWW+  YA V+RLRR                          +   +L  VS +   D    ++ A NA    A+    ++ G++ A   ++  REA      I+S VQ +  QI RY+EQL D+Y  I+E WK+  P   D     HF  D                                      DFA SEYDV+L+ R IE+KEKMK+R++ GGA +P ML +    G  EF DTS+  LT+DG PMRCA R L EKC+  CNCP  VER+SRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHD IEFYYDSKQCI+YKALLKENEARRRG +  LVWLK AARQVGAT+DLR D++  E++RLYPP NDYLYTTF+KHPGSRPFH T S   Q G+                                                    G +      V R+S  N +    L +       R   +          +P     RQ ++ED EGK+VMTKWTEEEK  AIQLLE YGKQWALISG M G+KKPEQIKNFFSNYKKKYRLDERLP
Sbjct:    4 GNNCGGSGHERERNRGEKSVAFRGN-VWPSSQKDYRSLLSESDREDRK---PGNGSSVGGRSRRNVSYRRDAFDDDRELRTSGFIDFKGRERDMGLHRGRSRSDSERASWPTA-PLMSSNPGGPLDNVRNR----LLSASASLPSDSLQATRRCTMG--------DDDTSRNSRGRKEDDATSLAAAGTDRLLKLNMDRRKTGRREMEEVRHSTAAR---GKHK---HFSWEEGPL-EASHASRRPSLTQETGRSSVISSTRTLSAASIIHGKS-------CLYESSHNADKGHNQYLPRSDEQGVPEVFCQSLLCRPLDGGYGPRRAPWRYSDLSITEARQRRVAFELGEVQGAGVEAF--------AFGHDTFLTNGQVGGVEGPDFVEEYPLSRCHSTYSLDNSDILEG--HGSMQAPCLPTPTK-------TGVGGVSRLLSVRQGTAHVSSREPRMERTHSESSGSASSGRLRLGWGQGLARRA-TAFEQKSPRDDAAILPKKYGARGNADFAADKPNNVELSSKVLNSDLC-------ALKDPGLGVSKATSLQNDPSQQQFLPIADGIGLPSTSFTQSRKGREQQEKRLLQNKGAKKFFQTRRLRQMAVAYVRHVWRKNALKPAARVSLFTISSSSVGGVSAPGGVVSGKNENVPFVPSIDKK--VVQEELLKTDAASSSNKQRKGSPCRFLEQEGGNVEVKRQKSACMTETSLTSATKHAEREAAQAKLQKYRALSAAAGYPLCGLLPKESMARALKVTACVRAFRPHADKNMQTV-LKAEAEMVPLPCREDILSALEFVNADVERLQAEVTVVEDSILHGAAGSAAYRAPWWNRAYADVLRLRREASRKIKMLAWKV-------------KKEQLLLEVSSEGARDKVYDSIQASNATDENANENRDIRCGALGALAKRQISREA------IQSIVQSRVIQIHRYVEQLTDQYTQIDEAWKQSHPPRPDESRDAHFASD---MRTTRTLAALQRTSFPGANASDRPTRMGAFTLRGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSRPFHQT-SLLQQSGE----------YVKHQAVARRQVCATSQSIEQTTSYAPLPSFAFPERHSAQLYGGNGNNGVVVDRSSVPNDAALNMLPTLHHVEESRSSVVFQERDETHFVTPADFSPRQHDDEDVEGKRVMTKWTEEEKHYAIQLLETYGKQWALISGMMEGSKKPEQIKNFFSNYKKKYRLDERLP 1335          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: CBN75801.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 160.2 bits (404), Expect = 5.300e-35
Identity = 89/207 (43.00%), Postives = 115/207 (55.56%), Query Frame = 0
Query: 1022 DFAASEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVWLKQAARQVGATVDLRYDSNDREIVRLYP-PANDYLYTTFHKHPGSR 1228
            D   S+Y+ A + +  E+K K + R+  G   VP+ML   E R   E+ D+ N+  TTDG P RC G      C   CNCP  VE + +  N W+D+EKCIFLDKFL +PKNF +IASFL RKS  D ++FYYDSK  I+YK LLKE   R +G   +     +A R VGA V +  D         +P P  D  + T   HP SR
Sbjct: 1792 DVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAERKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQP-----FFPVPQRDDSFATADMHPPSR 1993          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: GBG34775.1 (REST corepressor 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 121.3 bits (303), Expect = 2.700e-23
Identity = 79/230 (34.35%), Postives = 110/230 (47.83%), Query Frame = 0
Query: 1022 DFAASEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCA----------------------------GRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQ--CINYKALLKENEARRRGTEHELVW--LKQAARQVG------ATVDLRYDSNDREIVR-LYPPA 1213
            DF  S+Y+     + +EE E  +    +  AT+P M +V E   R    +T    LTTDG P RCA                            G    +     CNC   V  Q+  VNPW+D+EK I++DKFLQYPK+F KI++FLR KST D +EFYY  K+    N+K LL+E    R+ T+ +  W   + AAR +G         ++R   +D E  R   PP+
Sbjct: 1133 DFVGSDYEAQARLKELEEAEAREKTRQINAATLPDM-IVSERSQRLARFETQTTRLTTDGMPARCADLPGHVPCSAVGAVYKAEKMQAGREILSGDAAEQPTLSGCNCARAVAMQNTLVNPWTDLEKLIYVDKFLQYPKDFYKISTFLRNKSTRDCVEFYYRVKKMGSFNFKILLQEQFMHRK-TQRKPQWTLTEVAARALGIELPASVEAEVRRQQSDEEQKRPAVPPS 1360          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: GAX12127.1 (nuclear receptor co-repressor 1 [Fistulifera solaris])

HSP 1 Score: 117.5 bits (293), Expect = 4.000e-22
Identity = 78/204 (38.24%), Postives = 98/204 (48.04%), Query Frame = 0
Query: 1026 SEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW--LKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSR 1228
            SEY+   +   I  KE M+ R+  GG   P  +   E +    F +T  A      E                       E+     N W+D EKCIFLD+FLQ+PK+FRKIASFLR K+T D I+FYYDSKQ ++YK  LKE+  RR+      VW    QAA  VGA V    D  +  +  L  P ND  Y T   HP  R
Sbjct:  968 SEYEQEQIIAEIAAKEAMEKRIAFGGCKTPRQIGAVERQLTANFYNTFTAQKVDVVEQ----------------------EKLCAMENMWTDTEKCIFLDRFLQHPKDFRKIASFLRNKTTRDCIKFYYDSKQTVSYKGALKEHIMRRKRRGEYHVWDATIQAALSVGAVVKAGTDEENPLVFSL--PENDCTYNTRDLHPLKR 1147          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: XP_002184535.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43934.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 110.9 bits (276), Expect = 3.700e-20
Identity = 98/325 (30.15%), Postives = 137/325 (42.15%), Query Frame = 0
Query: 1106 ERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW--LKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDV-EMTSAVSRTSSTNSSHAKDLASCFPAGPRRGGEIMGLPASSPRA-----------------GGSRQMEEEDSEG-----KKVMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFFSNYKK 1406
            E + R    W+DMEKCIFLD+F+Q+PK+FRKIASFLR K+T D + FYYDSKQ + YK  LKE+  RR+      +W    QAA  VGA V+   DS ++ ++    P +D+ ++TF  HP  R        + Q                                                        FD  E    VS  S       +D    F   PR+   +  LP  S  A                   S++   +D  G     +K   KWT  EK+     LE +G+ W+++S +  GTK   QIKN++ +YKK
Sbjct: 1153 EAELRITGVWTDMEKCIFLDRFMQHPKDFRKIASFLRNKTTTDCVAFYYDSKQTLPYKGALKEHVMRRKRRGGYPIWEATIQAALSVGAVVEAG-DSEEKPLI-FTLPFDDHTFSTFGLHPLKREVLDLMEIKEQ----------------------------------------------------ALAEFDADEDADDVSSKSGQPKKRPRD--RLFLLDPRQRKFLKPLPQESAHATCLKVDSGKASTADDDHNDSKEGTAKDESGRLTPLRKAPQKWTASEKKIFHDTLESHGRNWSMLS-QAVGTKTISQIKNYYYDYKK 1420          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: XP_002182300.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46201.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 110.9 bits (276), Expect = 3.700e-20
Identity = 98/325 (30.15%), Postives = 137/325 (42.15%), Query Frame = 0
Query: 1106 ERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW--LKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDV-EMTSAVSRTSSTNSSHAKDLASCFPAGPRRGGEIMGLPASSPRA-----------------GGSRQMEEEDSEG-----KKVMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFFSNYKK 1406
            E + R    W+DMEKCIFLD+F+Q+PK+FRKIASFLR K+T D + FYYDSKQ + YK  LKE+  RR+      +W    QAA  VGA V+   DS ++ ++    P +D+ ++TF  HP  R        + Q                                                        FD  E    VS  S       +D    F   PR+   +  LP  S  A                   S++   +D  G     +K   KWT  EK+     LE +G+ W+++S +  GTK   QIKN++ +YKK
Sbjct: 1152 EAELRITGVWTDMEKCIFLDRFMQHPKDFRKIASFLRNKTTTDCVAFYYDSKQTLPYKGALKEHVMRRKRRGGYPIWEATIQAALSVGAVVEAG-DSEEKPLI-FTLPFDDHTFSTFGLHPLKREVLDLMEIKEQ----------------------------------------------------ALAEFDADEDADDVSSKSGQPKKRPRD--RLFLLDPRQRKFLKPLPQESAHATCLKVDSGKASTADDDHNDSKEGTAKDESGRLTPLRKAPQKWTASEKKIFHDTLESHGRNWSMLS-QAVGTKTISQIKNYYYDYKK 1419          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: GAX11585.1 (nuclear receptor co-repressor 1 [Fistulifera solaris])

HSP 1 Score: 109.8 bits (273), Expect = 8.300e-20
Identity = 110/400 (27.50%), Postives = 157/400 (39.25%), Query Frame = 0
Query: 1026 SEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKEN--EARRRGTEHELVWLKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDVEMTSAVSRTSSTNS---SHAKDLASCFPAGPRRGGEIMGLPASSPRAGGSRQM-----EEEDSEGKK-VMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFFSNYKK--KYRLDER 1413
            SEY+   +   I  KE M+ R+  GG   P  +   E +    F +T  A      E                       E+     N W+D EKCIFLD+FLQ+PK+FRKIASFLR K+T D I+FYYDSKQ ++YK  LKE+    +RRG  H      QAA  VGA V    D  +  +  L  P ND  Y T   H    P +      ++  +    R                                                 D E  S  S+            +      P  P +  E   L  S  +A  +        +E+ S  +K    KWT  EK+  ++ +E  G+ W ++   + G+K   QIKN++ ++KK  K + D+R
Sbjct:  977 SEYEQEQIIAEIAAKEAMEKRIAFGGCKTPRQIGAVERQLTANFYNTFTAQKVDVVEQ----------------------EKLCAMENMWTDTEKCIFLDRFLQHPKDFRKIASFLRNKTTRDCIKFYYDSKQTVSYKGALKEHIMRRKRRGEYHVWEATIQAALSVGAVVKAGTDEENPLVFTL--PENDCTYNTRDLH----PLNQEVFDSMEFNEEEAARYQAK--------------------------------------------LDKEAKSKKSKKRKVPDLFLLEPEQRKYLRPDTPEQTVEEKPLKKSLSKASVAESFPISMTDEQPSHARKSASKKWTASEKKIFLETVEKNGRNWKVLEDAI-GSKSISQIKNYYYDWKKGGKEKPDKR 1303          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: EJK62145.1 (hypothetical protein THAOC_17257, partial [Thalassiosira oceanica])

HSP 1 Score: 106.3 bits (264), Expect = 9.100e-19
Identity = 60/131 (45.80%), Postives = 77/131 (58.78%), Query Frame = 0
Query: 1096 SGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW--LKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHP 1225
            SG  +     E + ++VN WSDMEKCIFLD+FL +PK+FRKI+SFL  KST D + FYYDSK+ + YK  LKE   R++     + W    QAA  VGA V     +   + VR+  P  DY Y T   HP
Sbjct:  240 SGLVDDAQAEEDERKHVNVWSDMEKCIFLDRFLHHPKDFRKISSFLVNKSTKDCVRFYYDSKKTVPYKHALKEFLQRKKRRGDVVSWDATVQAALAVGAVV--TEGTGPEDPVRISLPPGDYTYRTRSFHP 368          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: GAY04513.1 (Hypothetical protein PINS_012336, partial [Pythium insidiosum])

HSP 1 Score: 105.5 bits (262), Expect = 1.600e-18
Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 0
Query: 1106 ERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW 1183
            E   RY+NPW+DMEKCI++DKFLQYPKNF +IASFL  K+T D I FYY +K+ ++YKALL+E + RRRG   +  W
Sbjct:  366 EVAERYINPWNDMEKCIYVDKFLQYPKNFARIASFLCNKTTGDVIAFYYRTKKVVDYKALLREQQLRRRGAGSKNTW 442          
BLAST of NO03G02860 vs. NCBI_GenBank
Match: CCI41446.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 104.8 bits (260), Expect = 2.700e-18
Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0
Query: 1086 CAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW 1183
            C G+G     +G C+      +  +YVNPWSD+EKCI++DKFLQ+PKNF KIA+FL  KST D I +YY +K+ ++YKALL+E + RRRG   +  W
Sbjct:  923 CYGQG--TTTNGLCDDWKERLKMQKYVNPWSDIEKCIYVDKFLQFPKNFTKIATFLSNKSTGDVILYYYQTKKVLDYKALLREQQLRRRGAGSKNTW 1017          
The following BLAST results are available for this feature:
BLAST of NO03G02860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29768.15.400e-18937.36nuclear receptor corepressor 1-like protein [Nanno... [more]
CBN75801.15.300e-3543.00conserved unknown protein [Ectocarpus siliculosus][more]
GBG34775.12.700e-2334.35REST corepressor 1 [Aurantiochytrium sp. FCC1311][more]
GAX12127.14.000e-2238.24nuclear receptor co-repressor 1 [Fistulifera solar... [more]
XP_002184535.13.700e-2030.15predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002182300.13.700e-2030.15predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX11585.18.300e-2027.50nuclear receptor co-repressor 1 [Fistulifera solar... [more]
EJK62145.19.100e-1945.80hypothetical protein THAOC_17257, partial [Thalass... [more]
GAY04513.11.600e-1859.74Hypothetical protein PINS_012336, partial [Pythium... [more]
CCI41446.12.700e-1850.52unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005609NSK005609Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02860.1NO03G02860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572317gene_1478Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100022g61gene908Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02860.1NO03G02860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02860 ID=NO03G02860|Name=NO03G02860|organism=Nannochloropsis oceanica|type=gene|length=5709bp
AAACACAGTAGTCTTGCACGGGTATCCTCTGCCGCGTCCGCCCGGGCAGG
GGTCAATCTTGCTTGCCTTGGCTTGGGGTGCCAAAAGCTTTTCGTGAGCA
CACACGCCGCGGAGGGCAACAGACCAAAACAGTTCTTGCGAGGTCAATGG
ACCTAAAGAAGAAGAGGGGGGAAGACGCGCCATCCACCTCCTCCAGCAGC
ATCAGgtaggaaaggaggagacgaagccggaggacgagactctcatcgga
tgatggtggtggagagggggagagggttgttgtggttcagcgcgagaccc
ccgttatcacatccgcaccattatcatccacgccaattccgagcagcaca
tcaaaccgcgagccaagcagcagcactcatgcatattccaatcactcccc
tccgccctcccttgcaactccacagGAATGTCTGTCATACCGGCTACATG
AGCCAAGTAAGCGGCAGCAGCGGTGGCGGCGCCAATGACAGGGGCCGCTT
TCATAGGGGTGGGAAGTCCATCATGATGCGAGACAATGGCCGAGGTCCCC
CTTTGTCCAAGGATTACCGGCAGCTACTAAGCCCCGGGGATCAATGGGAG
GAAAGTCGGGTGGTGGAAAGCGGGGGTGGGAGTGGGGGCAGCAGGTCCCA
TAAGAATAGAAGTTATAGGCGGGAAGGGGAGGCGGAGGAGCGGGAATCGC
GAGGGTGTGCATTCATGGACTACAAAGgtcagtggggaaattcgagtctg
gtctggaggctctccttggctcgcgtatttttgtgctcgtgctttcctca
ccatccatttttatgatgcacacgacagGCCGCGATCGGGGACGGAGCTC
AAGCAGGGAAGATGCTCGCTTCAGCGCCACTCGGACTGCCTGGTCATCTG
CAGTTCCACCTCCCCCGTCCCGGTTGAGCCTGAGGCTTGAGGATGCCGGA
GACCGCTCGTCGTCCTCCTCCTCAGTCTCCTCATCTAATTATCCCAATCC
CCAGGCAGCGCGGCGCTTCTCGATgtacgttgtgtatgtttctttccatc
tttgcaccatctgcccttattccctcgactctgacgaatgaccttgccca
tcaactcacagGGGAAGCGAGGGCCCATCGTGGCATCGGGACGACTCTCC
TTTACGCAATCCTCGGAGTCGCACCAGCGAAGACCCTTTCTTTGGTGGGT
CGGCAGAGGCAGACCGCATGCAGCGGATGAAGGTCGATAGACGGAGGATG
AACGAGGCGGAAGCGGAGGGGGAGAGACACAGCTCTTTGGCCCAACGTGA
TGGAGGGAAGGACAGGTGGAGACCTCCTGAGTCGTGGGAATCGGAGCCAC
AAAACCATGCGTCGTCCTCGTCAGCCCACCCGTCCTTGTTGCAAGGCATG
GGCCGCTCCTCTTTGCCTTCCCGGACAACCAATGTCTCTGCGGCGGCTGA
GAGCTGGTTGAGGTCTGACTCCACGAGTAGTGGCAGCCACCAGCATCCAC
ACCCGCACCAACACCAACATCAGCACCACGAGCGGAAGCTGCAGCAGCCG
CAGCAGCAGGTTAAGGAAGTCTTCATCCAGCCTTTGCTCTGTCGGCCATT
GGACGCCGGAAGTGGCACCCGACAGGCCCCCTGGAGCTTCAACGACGTGG
CCTCGTCCCTCTCATTGCTCGCCCTTCCAGCCGGGGGTGCGGCTTCGGCG
ACAGCCTCCAGCATCCTTACCTTTGGCCAGATTGTGGACAGTGCGACGAG
CTTCCATCATCGCCGCTTACTCACAGAGGAGATGAAGGTCTCCCAGTCCT
CTGTGTTCCAGGCTCAGAGAGAAGCGCGCAGGGAGGCAGCTAGTGGCGCC
GCGCTGTCCATCTCCGCCTCACACGAGGGGATGAACGGAGGGGTTTCTGA
CGAGCACCTGCTTCCGCGAGCGACCTCGTTCCAATCCCTCTTCCGTGGTT
ATGGCGTGACTGGGGGGGAGGGCCTTTTATCGGCCTCGACTTCAGGGTCT
GTGCAGCCCTTAGAGCCCCGCCTCCAGCGCAGCCTCTCGGAGGCGCCTAG
TGGCCGCCTTCGGCTTGGGTGGGGCCAAGGGCTGGCACGGCGCGCGATTA
GCACTCAAGAGCAGCCATCGCCGAGGGTTGTCCCGCCGAATCTTTCCAAG
GTAGGCGACAGACTTGACAGACTTGACAGCAGCGGCAAAAGCATCGACAA
TACCTTGCCCATGGAAAGGGCAAGAGAGGAGGTCGTCGTCGAGCCGACAG
AGGATGTAGCTGGAGCCGTTGATGTTACAAACGGTAAATCCAGCGTTCTC
AAGCAACGAGTAGTGTCATCGGAGAAACGACAGCGAAGACAGGAGAGGTC
TTGCGATGACAAGAGGAGCGAGCAGCGGGCTGGAATGAGGCGCCGCTTGC
GACGAATGCTGTTAGCCTTTGTTAGGCATCTGTGGCGAGAGAGTGCAACC
AGGGGAGTCGAGCGGGCTTCCACCGCCGCGTCCGCCTTTGCTTCAGTCAC
TCCGACTGCCAAAACCCCTACCGCAGCCACTGGCACAAGCAGTGCTCCCA
TGTCTGGCAAGAAGGACCCGTTGACAGAGAGGGAGCGCGGCGCTGGAGAG
GCTGTGGCGTCGCCCAAGATGCGTCGAGAACGTTCTTCTGAGGCCACATG
GCAGGGTGAGGAAGGTACGCGGACTTTGAAGCGGCAGAAGAGCGCATTAT
CGGTGCACCAGGAGGCAGCAGCTGCTGCGAAGCTAGCCGAGAAGAAGGCG
GCGCGAGCCAAGCTGGAAAAGTATCGGACTCTGTCATGTTCATCGGGATT
CCCCTTGTGCGGACTGCTCCCGATGGAATCGATGAGACGTGCAGTGAAGG
CGACCGCCTGCGTACGCGAGAAACAGCCGGGCACGGAAGCCGAGACCACG
GGGATGGGGACGGAGGTCGAGGCCGAACTGGTGCGGTTGCCGAGTCGAGA
GGACATCTTAGCTGTGCTTGAGAGCCTTAACTCGAAGGTAGAGCACCTGC
AGGAGGAGGTCGCCACCGTGGAGGAGGAAGTTTCAAACGCCACAGTTGCC
GCTGCCTCTTACCGGGCGCCCTGGTGGAGCAATACCTACGCAAGCGTTAT
CCGCCTGCGGCGCGAGGCAGCAGAGCAGCTTGATCGACGAAAGGTGGAAG
AAGACCAGCGACAGGAACAACAGCAGCAGCTGTTGATACGTGAAGGCGCG
CATATGCTCTGTCCCGTAAGTGGAGATGATGCAGCTGTTACTGCTCTTGC
CGCTCTTAACGCTCCTGTGTCTATAGCTGACGCGGTACAAGGAGGATCTG
TGGAAGCAGATGGGAATAAGAGGAGCGAAAGGGAGGCACTGACAAAGCGG
GAGCTCATAAAAAGCGCAGTTCAGGAGAAGAAGGCACAAATCCGGCGATA
CATCGAGCAGTTGGCAGACAAGTACTTAGATATCAATGAGACCTGGAAGC
GGAAGCAGCCAGGGGCAGACGACGACGAAGAACACGGGCACTTCCTGCAG
GATTCCATGCGCACGACCCGGACCTTCGCGGCATCGCAGCGCTCCTCCTA
CCCGAGCGGCGGGGGTGGGGATCGGACGTCTTCGCGCTCTGGTGGACTGT
CCTCATCCCGCGGCGGAGACTTTGCCGCCAGCGAGTATGATGTGGCTCTG
ATGGCGCGAGGTATCGAGGAGAAAGAGAAGATGAAGCTACGGATGGATCT
GGGTGGCGCCACGGTGCCCGCCATGTTGCTGGTGCCCGAACTTCGCGGCC
GGTTCGAATTCCTGGACACGTCGAATGCCCTCCTTACCACAGATGGAGAG
CCTATGCGCTGCGCGGGCCGAGGCTTGCGGGAGAAGTGTTCGGGTGCATG
CAATTGCCCATTGGGCGTGGAGCGGCAGAGCCGGTACGTTAACCCCTGGT
CGGACATGGAGAAGTGCATCTTCTTGGACAAGTTCCTACAGTACCCTAAG
AATTTTCGCAAGATCGCTTCCTTCCTGCGTCGCAAGAGCACGCACGACGC
CATCGAGTTCTACTACGACTCCAAACAGTGCATCAACTACAAGGCACTGC
TCAAGGAGAACGAGGCGCGCCGCCGTGGTACTGAACACGAGCTGGTATGG
CTCAAGCAGGCCGCTCGACAGGTCGGGGCCACGGTCGACCTACGCTACGA
CAGCAACGACCGTGAGATTGTGCGTTTGTACCCGCCCGCCAACGACTACC
TCTACACCACCTTCCACAAGCACCCCGGCAGTCGTCCTTTTCACCACACG
GCCTCCCAGCGCCTGCAGCATGGGCAGAGTCGAGGGGGCAGGGGTAGGGC
CACATCCCCGTCTTCGTCCTCCTACGCCTTTTCTGCCCAATCCCAGGCCC
AGGTTTTTGGCGGGGAGGCTACATCATCGACCGAATCTAGCTCGACAGCC
TACGGCACGGCATCCGCAACGAAATCTTCATTCGGCTTCGACGTAGAGAT
GACCAGCGCCGTCAGTAGAACCAGCAGCACCAATAGCAGCCATGCCAAAG
ACTTGGCGTCTTGCTTCCCAGCAGGCCCACGACGAGGAGGGGAGATTATG
GGGTTACCGGCATCCTCGCCACGCGCAGGCGGGTCGCGACAGATGGAGGA
GGAGGATTCCGAGGGGAAAAAAGTGATGACGAAATGGACGGAAGAGGAGA
AGCAGAAGGCAATCCAATTGCTGGAGGTGTACGGCAAGCAGTGGGCTCTC
ATTTCCGGCGAGATGGGTGGGACCAAGAAGCCGGAACAGATCAAGAATTT
TTTTAGTgtgagtcttgtatggtttgcatcgacagtgtactgtaggaatg
atctcgttttcgccattgtaatacgtttgcatgtacacgcatgcctcagt
ttgtcactcactaatgcttttacactcacagAATTACAAGAAGAAGTACC
GCCTGGACGAACGCCTGCCACCGCCTTTACCGGGGCAGCGACGGAGGGAA
CCCAAGCGCGCCAAGTCTCCGCCGCCTCCGACGATGCCCATGCCCCCCCT
TCTCTCTCAACAGGAGGCTGTTCCCGTACGATCAAGTGCGATGCACTCGC
AAGTGATGGCCATGCTTGGCGCTCCTGGAGAGGCCATATCGCTCCCGCGC
TACGTCGTGCATGTGGCTCCAGGCGACGATGCCCAGGCGGCGATCATGGT
ACATTTGGGCTCTCACCAGCACCAGCGGCCATATCAGTCGCAGCAGCAGC
AGTGGGAACAGCAGCACTTTCAGTCGCAGCAAGTTGCCCAGCAACAGGAG
CAACAGCAGACATACCACTTACAGCACAGCAGCACCAGCATCACCGCTCA
GCTGCCAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTATCTCAACCACT
ACCATCATGACATCCCCACTGATGGAGTGCCCCAGCAGCAGCAGCAACAA
CAACAGTCATTGCCACCGGGCACCGTCCAAGAGATACAACAGGAGCAAGC
AAGGGGGCAGTTTGTCAACGTGGAGTACCCGCAGGGGATTCATGAAGCAG
TAACGGCTGTTATGGACGTCGCGGCAGCCCAGCACGCGGGCAACGGAGGG
AATGGAGGAGGAAAGGACAAGACATCATGAGAGGGAAGGGTGCGAAAGAG
AGCAGGGGGAAGTGTAGCTATGACATGTACAAATCCATCCTGTGTCCGAC
GTCTGTATATAGAGCACCCTGCAAAGGAAAGAAAGCAACACTAAGCACGC
AGCGTCTCA
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protein sequence of NO03G02860.1

>NO03G02860.1-protein ID=NO03G02860.1-protein|Name=NO03G02860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1634bp
MDLKKKRGEDAPSTSSSSIRNVCHTGYMSQVSGSSGGGANDRGRFHRGGK
SIMMRDNGRGPPLSKDYRQLLSPGDQWEESRVVESGGGSGGSRSHKNRSY
RREGEAEERESRGCAFMDYKGRDRGRSSSREDARFSATRTAWSSAVPPPP
SRLSLRLEDAGDRSSSSSSVSSSNYPNPQAARRFSMGSEGPSWHRDDSPL
RNPRSRTSEDPFFGGSAEADRMQRMKVDRRRMNEAEAEGERHSSLAQRDG
GKDRWRPPESWESEPQNHASSSSAHPSLLQGMGRSSLPSRTTNVSAAAES
WLRSDSTSSGSHQHPHPHQHQHQHHERKLQQPQQQVKEVFIQPLLCRPLD
AGSGTRQAPWSFNDVASSLSLLALPAGGAASATASSILTFGQIVDSATSF
HHRRLLTEEMKVSQSSVFQAQREARREAASGAALSISASHEGMNGGVSDE
HLLPRATSFQSLFRGYGVTGGEGLLSASTSGSVQPLEPRLQRSLSEAPSG
RLRLGWGQGLARRAISTQEQPSPRVVPPNLSKVGDRLDRLDSSGKSIDNT
LPMERAREEVVVEPTEDVAGAVDVTNGKSSVLKQRVVSSEKRQRRQERSC
DDKRSEQRAGMRRRLRRMLLAFVRHLWRESATRGVERASTAASAFASVTP
TAKTPTAATGTSSAPMSGKKDPLTERERGAGEAVASPKMRRERSSEATWQ
GEEGTRTLKRQKSALSVHQEAAAAAKLAEKKAARAKLEKYRTLSCSSGFP
LCGLLPMESMRRAVKATACVREKQPGTEAETTGMGTEVEAELVRLPSRED
ILAVLESLNSKVEHLQEEVATVEEEVSNATVAAASYRAPWWSNTYASVIR
LRREAAEQLDRRKVEEDQRQEQQQQLLIREGAHMLCPVSGDDAAVTALAA
LNAPVSIADAVQGGSVEADGNKRSEREALTKRELIKSAVQEKKAQIRRYI
EQLADKYLDINETWKRKQPGADDDEEHGHFLQDSMRTTRTFAASQRSSYP
SGGGGDRTSSRSGGLSSSRGGDFAASEYDVALMARGIEEKEKMKLRMDLG
GATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACN
CPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAI
EFYYDSKQCINYKALLKENEARRRGTEHELVWLKQAARQVGATVDLRYDS
NDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRGRAT
SPSSSSYAFSAQSQAQVFGGEATSSTESSSTAYGTASATKSSFGFDVEMT
SAVSRTSSTNSSHAKDLASCFPAGPRRGGEIMGLPASSPRAGGSRQMEEE
DSEGKKVMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFF
SNYKKKYRLDERLPPPLPGQRRREPKRAKSPPPPTMPMPPLLSQQEAVPV
RSSAMHSQVMAMLGAPGEAISLPRYVVHVAPGDDAQAAIMVHLGSHQHQR
PYQSQQQQWEQQHFQSQQVAQQQEQQQTYHLQHSSTSITAQLPEQQQQQQ
QQQYLNHYHHDIPTDGVPQQQQQQQQSLPPGTVQEIQQEQARGQFVNVEY
PQGIHEAVTAVMDVAAAQHAGNGGNGGGKDKTS*
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Synonyms
Publications