NO03G02860, NO03G02860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02860 vs. NCBI_GenBank
Match: EWM29768.1 (nuclear receptor corepressor 1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 671.8 bits (1732), Expect = 5.400e-189 Identity = 532/1424 (37.36%), Postives = 691/1424 (48.53%), Query Frame = 0 Query: 33 GSSGGGANDRGRFHRGGKSIMMRDNGRGPPLSKDYRQLLSPGDQWEESRVVESGGGSGGSRSHKNRSYRREGEAEERESRGCAFMDYKGRDRGRSSSREDARFSATRTAWSSAVPPPPSRLSLRLEDAGDRSSXXXXXSSSNYPNP--QAARRFSMGSEGPSWHRDDSPLRNPRSRTSEDPFFGGSAEADRMQRMKVDRRRMNEAEAEGERHSSLAQRDGGKDRWRPPESWESEPQNHASSSSAHPSLLQGMGRSSLPSRTTNVSAAAESWLRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKEVFIQPLLCRPLDAGSGTRQAPWSFNDVASSLSLLALPAGGAASATASSILTFGQIVDSATSFHHRRLLTEEMKVSQSSVFQAQREARREAASGAALSISASHEGMNGGVSDEHLLPRATSFQSLFRGYGVTGGEGLLSA-STSGSVQPLEPRLQRSLSE----APSGRLRLGWGQGLARRAISTQEQPSPR----VVPP------NLSKVGDRLDRLDSSGKSIDNTLPMERAREEVVVEPTEDVAGAVDVTNGKS-----------SVLKQRVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLAFVRHLWRESATRGVERASTAASAFASV----TPTAXXXXXXXXXXXAPMSGKKDPLTERERGAGEAVASPKMRRERSSEATWQGEEGTRTLKRQKSALSVHQEAAAAAKLAEKKAARAKLEKYRTLSCSSGFPLCGLLPMESMRRAVKATACVREKQPGTEAETTGMGTEVEAELVRLPSREDILAVLESLNSKVEHLQXXXXXXXXXXXNATVAAASYRAPWWSNTYASVIRLRRXXXXXXXXXXXXXXXXXXXXXXXXXREGAHMLCPVSGD---DAAVTALAALNAPVSIADA---VQGGSVEADGNKRSEREALTKRELIKSAVQEKKAQIRRYIEQLADKYLDINETWKRKQPGADDXXXHGHFLQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFAASEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVWLKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDVEMTSAVSRTSSTNSSHAKDLASCFPAGPRRGGEIM----GLPASSPRAGGSRQMEEEDSEGKKVMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFFSNYKKKYRLDERLP 1415 G++ GG+ +RG KS+ R N P KDYR LLS D+ + G S G RS +N SYRR+ ++RE R F+D+KGR+R R +R + R +W +A P S L++ +R +S++ P+ QA RR +MG DD RN R R +D +A DR+ ++ +DRR+ E E RHS+ A+ GK + SWE P AS +S PSL Q GRSS+ S T +SAA+ +S V EVF Q LLCRPLD G G R+APW ++D++ + + A + + F +F H LT + S +L S EG G LP T GV G LLS + V EPR++R+ SE A SGRLRLGWGQGLARRA + EQ SPR ++P N D+ + ++ S K +++ L + +P V+ A + N S + +A+VRH+WR++A + R S + +SV P P KK + + E +A +S +R+ S + E G +KRQKSA +A K AE++AA+AKL+KYR LS ++G+PLCGLLP ESM RA+K TACVR +P + + + EAE+V LP REDIL+ LE +N+ VE LQ + +A+YRAPWW+ YA V+RLRR + +L VS + D ++ A NA A+ ++ G++ A ++ REA I+S VQ + QI RY+EQL D+Y I+E WK+ P D HF D DFA SEYDV+L+ R IE+KEKMK+R++ GGA +P ML + G EF DTS+ LT+DG PMRCA R L EKC+ CNCP VER+SRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHD IEFYYDSKQCI+YKALLKENEARRRG + LVWLK AARQVGAT+DLR D++ E++RLYPP NDYLYTTF+KHPGSRPFH T S Q G+ G + V R+S N + L + R + +P RQ ++ED EGK+VMTKWTEEEK AIQLLE YGKQWALISG M G+KKPEQIKNFFSNYKKKYRLDERLP Sbjct: 4 GNNCGGSGHERERNRGEKSVAFRGN-VWPSSQKDYRSLLSESDREDRK---PGNGSSVGGRSRRNVSYRRDAFDDDRELRTSGFIDFKGRERDMGLHRGRSRSDSERASWPTA-PLMSSNPGGPLDNVRNR----LLSASASLPSDSLQATRRCTMG--------DDDTSRNSRGRKEDDATSLAAAGTDRLLKLNMDRRKTGRREMEEVRHSTAAR---GKHK---HFSWEEGPL-EASHASRRPSLTQETGRSSVISSTRTLSAASIIHGKS-------CLYESSHNADKGHNQYLPRSDEQGVPEVFCQSLLCRPLDGGYGPRRAPWRYSDLSITEARQRRVAFELGEVQGAGVEAF--------AFGHDTFLTNGQVGGVEGPDFVEEYPLSRCHSTYSLDNSDILEG--HGSMQAPCLPTPTK-------TGVGGVSRLLSVRQGTAHVSSREPRMERTHSESSGSASSGRLRLGWGQGLARRA-TAFEQKSPRDDAAILPKKYGARGNADFAADKPNNVELSSKVLNSDLC-------ALKDPGLGVSKATSLQNDPSQQQFLPIADGIGLPSTSFTQSRKGREQQEKRLLQNKGAKKFFQTRRLRQMAVAYVRHVWRKNALKPAARVSLFTISSSSVGGVSAPGGVVSGKNENVPFVPSIDKK--VVQEELLKTDAASSSNKQRKGSPCRFLEQEGGNVEVKRQKSACMTETSLTSATKHAEREAAQAKLQKYRALSAAAGYPLCGLLPKESMARALKVTACVRAFRPHADKNMQTV-LKAEAEMVPLPCREDILSALEFVNADVERLQAEVTVVEDSILHGAAGSAAYRAPWWNRAYADVLRLRREASRKIKMLAWKV-------------KKEQLLLEVSSEGARDKVYDSIQASNATDENANENRDIRCGALGALAKRQISREA------IQSIVQSRVIQIHRYVEQLTDQYTQIDEAWKQSHPPRPDESRDAHFASD---MRTTRTLAALQRTSFPGANASDRPTRMGAFTLRGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSRPFHQT-SLLQQSGE----------YVKHQAVARRQVCATSQSIEQTTSYAPLPSFAFPERHSAQLYGGNGNNGVVVDRSSVPNDAALNMLPTLHHVEESRSSVVFQERDETHFVTPADFSPRQHDDEDVEGKRVMTKWTEEEKHYAIQLLETYGKQWALISGMMEGSKKPEQIKNFFSNYKKKYRLDERLP 1335
BLAST of NO03G02860 vs. NCBI_GenBank
Match: CBN75801.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 160.2 bits (404), Expect = 5.300e-35 Identity = 89/207 (43.00%), Postives = 115/207 (55.56%), Query Frame = 0 Query: 1022 DFAASEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVWLKQAARQVGATVDLRYDSNDREIVRLYP-PANDYLYTTFHKHPGSR 1228 D S+Y+ A + + E+K K + R+ G VP+ML E R E+ D+ N+ TTDG P RC G C CNCP VE + + N W+D+EKCIFLDKFL +PKNF +IASFL RKS D ++FYYDSK I+YK LLKE R +G + +A R VGA V + D +P P D + T HP SR Sbjct: 1792 DVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAERKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQP-----FFPVPQRDDSFATADMHPPSR 1993
BLAST of NO03G02860 vs. NCBI_GenBank
Match: GBG34775.1 (REST corepressor 1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 121.3 bits (303), Expect = 2.700e-23 Identity = 79/230 (34.35%), Postives = 110/230 (47.83%), Query Frame = 0 Query: 1022 DFAASEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCA----------------------------GRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQ--CINYKALLKENEARRRGTEHELVW--LKQAARQVG------ATVDLRYDSNDREIVR-LYPPA 1213 DF S+Y+ + +EE E + + AT+P M +V E R +T LTTDG P RCA G + CNC V Q+ VNPW+D+EK I++DKFLQYPK+F KI++FLR KST D +EFYY K+ N+K LL+E R+ T+ + W + AAR +G ++R +D E R PP+ Sbjct: 1133 DFVGSDYEAQARLKELEEAEAREKTRQINAATLPDM-IVSERSQRLARFETQTTRLTTDGMPARCADLPGHVPCSAVGAVYKAEKMQAGREILSGDAAEQPTLSGCNCARAVAMQNTLVNPWTDLEKLIYVDKFLQYPKDFYKISTFLRNKSTRDCVEFYYRVKKMGSFNFKILLQEQFMHRK-TQRKPQWTLTEVAARALGIELPASVEAEVRRQQSDEEQKRPAVPPS 1360
BLAST of NO03G02860 vs. NCBI_GenBank
Match: GAX12127.1 (nuclear receptor co-repressor 1 [Fistulifera solaris]) HSP 1 Score: 117.5 bits (293), Expect = 4.000e-22 Identity = 78/204 (38.24%), Postives = 98/204 (48.04%), Query Frame = 0 Query: 1026 SEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW--LKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSR 1228 SEY+ + I KE M+ R+ GG P + E + F +T A E E+ N W+D EKCIFLD+FLQ+PK+FRKIASFLR K+T D I+FYYDSKQ ++YK LKE+ RR+ VW QAA VGA V D + + L P ND Y T HP R Sbjct: 968 SEYEQEQIIAEIAAKEAMEKRIAFGGCKTPRQIGAVERQLTANFYNTFTAQKVDVVEQ----------------------EKLCAMENMWTDTEKCIFLDRFLQHPKDFRKIASFLRNKTTRDCIKFYYDSKQTVSYKGALKEHIMRRKRRGEYHVWDATIQAALSVGAVVKAGTDEENPLVFSL--PENDCTYNTRDLHPLKR 1147
BLAST of NO03G02860 vs. NCBI_GenBank
Match: XP_002184535.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43934.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 110.9 bits (276), Expect = 3.700e-20 Identity = 98/325 (30.15%), Postives = 137/325 (42.15%), Query Frame = 0 Query: 1106 ERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW--LKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDV-EMTSAVSRTSSTNSSHAKDLASCFPAGPRRGGEIMGLPASSPRA-----------------GGSRQMEEEDSEG-----KKVMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFFSNYKK 1406 E + R W+DMEKCIFLD+F+Q+PK+FRKIASFLR K+T D + FYYDSKQ + YK LKE+ RR+ +W QAA VGA V+ DS ++ ++ P +D+ ++TF HP R + Q FD E VS S +D F PR+ + LP S A S++ +D G +K KWT EK+ LE +G+ W+++S + GTK QIKN++ +YKK Sbjct: 1153 EAELRITGVWTDMEKCIFLDRFMQHPKDFRKIASFLRNKTTTDCVAFYYDSKQTLPYKGALKEHVMRRKRRGGYPIWEATIQAALSVGAVVEAG-DSEEKPLI-FTLPFDDHTFSTFGLHPLKREVLDLMEIKEQ----------------------------------------------------ALAEFDADEDADDVSSKSGQPKKRPRD--RLFLLDPRQRKFLKPLPQESAHATCLKVDSGKASTADDDHNDSKEGTAKDESGRLTPLRKAPQKWTASEKKIFHDTLESHGRNWSMLS-QAVGTKTISQIKNYYYDYKK 1420
BLAST of NO03G02860 vs. NCBI_GenBank
Match: XP_002182300.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46201.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 110.9 bits (276), Expect = 3.700e-20 Identity = 98/325 (30.15%), Postives = 137/325 (42.15%), Query Frame = 0 Query: 1106 ERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW--LKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDV-EMTSAVSRTSSTNSSHAKDLASCFPAGPRRGGEIMGLPASSPRA-----------------GGSRQMEEEDSEG-----KKVMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFFSNYKK 1406 E + R W+DMEKCIFLD+F+Q+PK+FRKIASFLR K+T D + FYYDSKQ + YK LKE+ RR+ +W QAA VGA V+ DS ++ ++ P +D+ ++TF HP R + Q FD E VS S +D F PR+ + LP S A S++ +D G +K KWT EK+ LE +G+ W+++S + GTK QIKN++ +YKK Sbjct: 1152 EAELRITGVWTDMEKCIFLDRFMQHPKDFRKIASFLRNKTTTDCVAFYYDSKQTLPYKGALKEHVMRRKRRGGYPIWEATIQAALSVGAVVEAG-DSEEKPLI-FTLPFDDHTFSTFGLHPLKREVLDLMEIKEQ----------------------------------------------------ALAEFDADEDADDVSSKSGQPKKRPRD--RLFLLDPRQRKFLKPLPQESAHATCLKVDSGKASTADDDHNDSKEGTAKDESGRLTPLRKAPQKWTASEKKIFHDTLESHGRNWSMLS-QAVGTKTISQIKNYYYDYKK 1419
BLAST of NO03G02860 vs. NCBI_GenBank
Match: GAX11585.1 (nuclear receptor co-repressor 1 [Fistulifera solaris]) HSP 1 Score: 109.8 bits (273), Expect = 8.300e-20 Identity = 110/400 (27.50%), Postives = 157/400 (39.25%), Query Frame = 0 Query: 1026 SEYDVALMARGIEEKEKMKLRMDLGGATVPAMLLVPELRGRFEFLDTSNALLTTDGEPMRCAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKEN--EARRRGTEHELVWLKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHPGSRPFHHTASQRLQHGQSRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDVEMTSAVSRTSSTNS---SHAKDLASCFPAGPRRGGEIMGLPASSPRAGGSRQM-----EEEDSEGKK-VMTKWTEEEKQKAIQLLEVYGKQWALISGEMGGTKKPEQIKNFFSNYKK--KYRLDER 1413 SEY+ + I KE M+ R+ GG P + E + F +T A E E+ N W+D EKCIFLD+FLQ+PK+FRKIASFLR K+T D I+FYYDSKQ ++YK LKE+ +RRG H QAA VGA V D + + L P ND Y T H P + ++ + R D E S S+ + P P + E L S +A + +E+ S +K KWT EK+ ++ +E G+ W ++ + G+K QIKN++ ++KK K + D+R Sbjct: 977 SEYEQEQIIAEIAAKEAMEKRIAFGGCKTPRQIGAVERQLTANFYNTFTAQKVDVVEQ----------------------EKLCAMENMWTDTEKCIFLDRFLQHPKDFRKIASFLRNKTTRDCIKFYYDSKQTVSYKGALKEHIMRRKRRGEYHVWEATIQAALSVGAVVKAGTDEENPLVFTL--PENDCTYNTRDLH----PLNQEVFDSMEFNEEEAARYQAK--------------------------------------------LDKEAKSKKSKKRKVPDLFLLEPEQRKYLRPDTPEQTVEEKPLKKSLSKASVAESFPISMTDEQPSHARKSASKKWTASEKKIFLETVEKNGRNWKVLEDAI-GSKSISQIKNYYYDWKKGGKEKPDKR 1303
BLAST of NO03G02860 vs. NCBI_GenBank
Match: EJK62145.1 (hypothetical protein THAOC_17257, partial [Thalassiosira oceanica]) HSP 1 Score: 106.3 bits (264), Expect = 9.100e-19 Identity = 60/131 (45.80%), Postives = 77/131 (58.78%), Query Frame = 0 Query: 1096 SGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW--LKQAARQVGATVDLRYDSNDREIVRLYPPANDYLYTTFHKHP 1225 SG + E + ++VN WSDMEKCIFLD+FL +PK+FRKI+SFL KST D + FYYDSK+ + YK LKE R++ + W QAA VGA V + + VR+ P DY Y T HP Sbjct: 240 SGLVDDAQAEEDERKHVNVWSDMEKCIFLDRFLHHPKDFRKISSFLVNKSTKDCVRFYYDSKKTVPYKHALKEFLQRKKRRGDVVSWDATVQAALAVGAVV--TEGTGPEDPVRISLPPGDYTYRTRSFHP 368
BLAST of NO03G02860 vs. NCBI_GenBank
Match: GAY04513.1 (Hypothetical protein PINS_012336, partial [Pythium insidiosum]) HSP 1 Score: 105.5 bits (262), Expect = 1.600e-18 Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 0 Query: 1106 ERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW 1183 E RY+NPW+DMEKCI++DKFLQYPKNF +IASFL K+T D I FYY +K+ ++YKALL+E + RRRG + W Sbjct: 366 EVAERYINPWNDMEKCIYVDKFLQYPKNFARIASFLCNKTTGDVIAFYYRTKKVVDYKALLREQQLRRRGAGSKNTW 442
BLAST of NO03G02860 vs. NCBI_GenBank
Match: CCI41446.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 104.8 bits (260), Expect = 2.700e-18 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0 Query: 1086 CAGRGLREKCSGACNCPLGVERQSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDAIEFYYDSKQCINYKALLKENEARRRGTEHELVW 1183 C G+G +G C+ + +YVNPWSD+EKCI++DKFLQ+PKNF KIA+FL KST D I +YY +K+ ++YKALL+E + RRRG + W Sbjct: 923 CYGQG--TTTNGLCDDWKERLKMQKYVNPWSDIEKCIYVDKFLQFPKNFTKIATFLSNKSTGDVILYYYQTKKVLDYKALLREQQLRRRGAGSKNTW 1017 The following BLAST results are available for this feature:
BLAST of NO03G02860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02860 ID=NO03G02860|Name=NO03G02860|organism=Nannochloropsis oceanica|type=gene|length=5709bpback to top protein sequence of NO03G02860.1 >NO03G02860.1-protein ID=NO03G02860.1-protein|Name=NO03G02860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1634bpback to top Synonyms
Publications
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