NO03G02850, NO03G02850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02850 vs. NCBI_GenBank
Match: EWM29725.1 (adp-ribosylation factor 3 [Nannochloropsis gaditana]) HSP 1 Score: 329.3 bits (843), Expect = 9.600e-87 Identity = 174/234 (74.36%), Postives = 181/234 (77.35%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMGG 235 MGLL S+I+QS S MFG+KECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAIIFVVDSADVERLAIAKQELCAMLEEEELR+SILLVFANKQDQKGALNAS QISEALGL NLR+RQWSIQETSATKGKGLFEGFDWLSTAI+GG Sbjct: 1 MGLLFSRIIQSFSAMFGNKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRESILLVFANKQDQKGALNAS-------------------------------------------------QISEALGLSNLRSRQWSIQETSATKGKGLFEGFDWLSTAILGG 185
BLAST of NO03G02850 vs. NCBI_GenBank
Match: OEU16881.1 (Arl1-family small GTPase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 287.7 bits (735), Expect = 3.200e-74 Identity = 151/233 (64.81%), Postives = 167/233 (71.67%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMG 234 MG+L SK+ + T+FGSKE RILILGLDNAGKTTIL RLQN+SDE +QT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAIIFVVDSAD ER+ +AK EL AMLEE+EL+DSILLVFANKQDQKGA+NA QIS+ALGLP++RNRQWSIQETSA KGKGLFEGFDWL T I G Sbjct: 1 MGILFSKVFE---TLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERMPVAKGELAAMLEEDELKDSILLVFANKQDQKGAMNAQ-------------------------------------------------QISDALGLPDIRNRQWSIQETSALKGKGLFEGFDWLVTCIKG 181
BLAST of NO03G02850 vs. NCBI_GenBank
Match: EJK75650.1 (hypothetical protein THAOC_02625 [Thalassiosira oceanica]) HSP 1 Score: 285.0 bits (728), Expect = 2.100e-73 Identity = 150/233 (64.38%), Postives = 168/233 (72.10%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMG 234 MG+++S++ +SL FG+KE RILILGLDNAGKTTIL RLQN+SDE +QT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAI+FVVDSADVER+ +AK EL AMLEEEELRDSILLVFANKQDQKGALNA QIS+ALGLP +RNRQWSIQETSA +GKGLFEGFDWL + I G Sbjct: 1 MGIIMSRVFESL---FGTKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSADVERMNVAKGELAAMLEEEELRDSILLVFANKQDQKGALNAQ-------------------------------------------------QISDALGLPEVRNRQWSIQETSALQGKGLFEGFDWLVSCIKG 181
BLAST of NO03G02850 vs. NCBI_GenBank
Match: XP_002294394.1 (adp-ribosylation factor 1 [Thalassiosira pseudonana CCMP1335] >EED88228.1 adp-ribosylation factor 1 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 283.5 bits (724), Expect = 6.100e-73 Identity = 149/233 (63.95%), Postives = 168/233 (72.10%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMG 234 MG+++S++ +SL FGSKE RILILGLDNAGKTTIL RLQN+SDE +QT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAI+FVVDSADVER+++AK EL AMLEEEEL++SILLVFANKQDQKGALNA QIS+ALGLP +RNRQWSIQETSA +GKGLFEGFDWL I G Sbjct: 1 MGIIMSRVFESL---FGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSADVERMSVAKGELAAMLEEEELQNSILLVFANKQDQKGALNAQ-------------------------------------------------QISDALGLPEVRNRQWSIQETSALQGKGLFEGFDWLVACIKG 181
BLAST of NO03G02850 vs. NCBI_GenBank
Match: XP_002176756.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51219.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 280.0 bits (715), Expect = 6.700e-72 Identity = 146/233 (62.66%), Postives = 167/233 (71.67%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMG 234 MG+++S++ + L FGSKE RILILGLDNAGKTTIL RLQN+SDE +QT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAIIFVVDSAD ER+++A+ EL AMLEEE+L+D+ILLVFANKQDQKGA++A QIS+ALGLP +RNRQWSIQETSA KGKGLFEGFDWL T I G Sbjct: 1 MGIIMSRLFEGL---FGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADTERMSVARGELAAMLEEEDLKDAILLVFANKQDQKGAMDAE-------------------------------------------------QISDALGLPEVRNRQWSIQETSALKGKGLFEGFDWLVTCIKG 181
BLAST of NO03G02850 vs. NCBI_GenBank
Match: CBJ27989.1 (ARL1, ARF-like Ras superfamily GTPase [Ectocarpus siliculosus]) HSP 1 Score: 278.9 bits (712), Expect = 1.500e-71 Identity = 146/234 (62.39%), Postives = 169/234 (72.22%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMGG 235 MG+++S++ Q+L FGSKE RILILGLDNAGKTTIL RLQN++D+ +QT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAI+FVVDS+D ER+AIAKQEL AMLEEEEL+D+ILLVFANKQDQ G+L +++V SEALGLP++RNRQWSIQE SA KGKGLFEGFDWL T I GG Sbjct: 1 MGIVLSRVFQAL---FGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMAIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEV-------------------------------------------------SEALGLPDIRNRQWSIQEASALKGKGLFEGFDWLVTCIKGG 182
BLAST of NO03G02850 vs. NCBI_GenBank
Match: GAX24826.1 (ADP-ribosylation factor-like protein 1 [Fistulifera solaris] >GAX14622.1 ADP-ribosylation factor-like protein 1 [Fistulifera solaris]) HSP 1 Score: 277.3 bits (708), Expect = 4.300e-71 Identity = 145/233 (62.23%), Postives = 166/233 (71.24%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMG 234 MG+ +S++ +SL FGSKE RILILGLDNAGKTTIL RLQN+SDE +QT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAI+FVVDSAD +R+++AK EL AMLEE++L+ +ILLVFANKQDQKGA+NA QIS+ALGLP +RNRQWSIQETSA KGKGLFEGFDWL T I G Sbjct: 1 MGIYMSRLFESL---FGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSADHDRMSVAKGELAAMLEEDDLKGAILLVFANKQDQKGAMNAG-------------------------------------------------QISDALGLPEVRNRQWSIQETSAVKGKGLFEGFDWLVTCIKG 181
BLAST of NO03G02850 vs. NCBI_GenBank
Match: XP_008613562.1 (ADP-ribosylation factor 1 [Saprolegnia diclina VS20] >EQC32876.1 ADP-ribosylation factor 1 [Saprolegnia diclina VS20]) HSP 1 Score: 271.6 bits (693), Expect = 2.400e-69 Identity = 147/233 (63.09%), Postives = 166/233 (71.24%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMG 234 MG++ISK+ SL FGSKE RILILGLDNAGKTTIL RLQ +DE+ QTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAII+VVD ADV+RL IAKQEL AMLEEEEL+DS+LLVFANKQDQ+GALNA+ Q+SEA+GL ++RNRQWSI+ET+ATKG GLFEGFDW+ T I G Sbjct: 1 MGIMISKVFASL---FGSKEVRILILGLDNAGKTTILYRLQ--ADEIEQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIYVVDCADVDRLNIAKQELHAMLEEEELKDSLLLVFANKQDQRGALNAA-------------------------------------------------QLSEAMGLSDIRNRQWSIKETTATKGTGLFEGFDWIVTCIKG 179
BLAST of NO03G02850 vs. NCBI_GenBank
Match: XP_009841988.1 (hypothetical protein H257_15545 [Aphanomyces astaci] >ETV68559.1 hypothetical protein H257_15545 [Aphanomyces astaci]) HSP 1 Score: 271.2 bits (692), Expect = 3.100e-69 Identity = 146/233 (62.66%), Postives = 166/233 (71.24%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMG 234 MG++ SK+ SL FGSKE RILILGLDNAGKTTIL RLQ ++E+ QTVPTIGFNVET+QYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAII+VVDSAD++RL IAKQEL AMLEEEEL+DSILLVFANKQDQ+GALNA+ QISEA+GL ++RNRQWSI+ET+ATKG GLFEGFDW+ T I G Sbjct: 1 MGIMFSKVFASL---FGSKEVRILILGLDNAGKTTILYRLQ--AEEIEQTVPTIGFNVETMQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIYVVDSADIDRLNIAKQELHAMLEEEELKDSILLVFANKQDQRGALNAA-------------------------------------------------QISEAMGLSDIRNRQWSIKETTATKGSGLFEGFDWIVTCIKG 179
BLAST of NO03G02850 vs. NCBI_GenBank
Match: OQR96129.1 (ADP-ribosylation factor family [Achlya hypogyna]) HSP 1 Score: 271.2 bits (692), Expect = 3.100e-69 Identity = 147/233 (63.09%), Postives = 165/233 (70.82%), Query Frame = 0 Query: 1 MGLLISKIMQSLSTMFGSKECRILILGLDNAGKTTILNRLQNDSDEVMQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYFPNTDAIIFVVDSADVERLAIAKQELCAMLEEEELRDSILLVFANKQDQKGALNASQVTWQHMHPFTYRFKPAPSHPLPSLSSYYYKLTLSFSSTPIFTYHVPVLQISEALGLPNLRNRQWSIQETSATKGKGLFEGFDWLSTAIMG 234 MG++ SK+ SL FGSKE RILILGLDNAGKTTIL RLQ +DE+ QTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCY+PNTDAII+VVD ADV+RL IAKQEL AMLEEEEL+DSILLVFANKQDQ+GALNA+ Q+SEA+GL ++RNRQWSI+ET+ATKG GLFEGFDW+ T I G Sbjct: 1 MGIMFSKVFASL---FGSKEVRILILGLDNAGKTTILYRLQ--ADEIEQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIYVVDCADVDRLNIAKQELHAMLEEEELKDSILLVFANKQDQRGALNAA-------------------------------------------------QLSEAMGLSDIRNRQWSIKETTATKGSGLFEGFDWIVTCIKG 179 The following BLAST results are available for this feature:
BLAST of NO03G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02850 ID=NO03G02850|Name=NO03G02850|organism=Nannochloropsis oceanica|type=gene|length=1808bpback to top protein sequence of NO03G02850.4 >NO03G02850.4-protein ID=NO03G02850.4-protein|Name=NO03G02850.4|organism=Nannochloropsis oceanica|type=polypeptide|length=229bpback to top protein sequence of NO03G02850.3 >NO03G02850.3-protein ID=NO03G02850.3-protein|Name=NO03G02850.3|organism=Nannochloropsis oceanica|type=polypeptide|length=237bpback to top protein sequence of NO03G02850.2 >NO03G02850.2-protein ID=NO03G02850.2-protein|Name=NO03G02850.2|organism=Nannochloropsis oceanica|type=polypeptide|length=180bpback to top protein sequence of NO03G02850.1 >NO03G02850.1-protein ID=NO03G02850.1-protein|Name=NO03G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bpback to top Synonyms
Publications
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